2014-01-11 18:16:30 +05:30
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#!/usr/bin/env python
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2014-01-24 18:00:27 +05:30
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import os,re,sys,string,subprocess,shutil
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2014-01-14 02:47:28 +05:30
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from optparse import OptionParser, Option
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# -----------------------------
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class extendableOption(Option):
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# -----------------------------
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# used for definition of new option parser action 'extend', which enables to take multiple option arguments
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# taken from online tutorial http://docs.python.org/library/optparse.html
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ACTIONS = Option.ACTIONS + ("extend",)
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STORE_ACTIONS = Option.STORE_ACTIONS + ("extend",)
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TYPED_ACTIONS = Option.TYPED_ACTIONS + ("extend",)
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ALWAYS_TYPED_ACTIONS = Option.ALWAYS_TYPED_ACTIONS + ("extend",)
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def take_action(self, action, dest, opt, value, values, parser):
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if action == "extend":
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lvalue = value.split(",")
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values.ensure_value(dest, []).extend(lvalue)
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else:
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Option.take_action(self, action, dest, opt, value, values, parser)
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2014-01-11 19:58:07 +05:30
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########################################################
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# MAIN
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########################################################
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2014-01-11 18:16:30 +05:30
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2014-01-11 19:58:07 +05:30
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parser = OptionParser(option_class=extendableOption, usage='%prog options', description = """
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2014-01-24 18:00:27 +05:30
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Configures the compilation and installation of DAMASK
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2014-01-11 18:16:30 +05:30
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2014-01-11 19:58:07 +05:30
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""" + string.replace('$Id$','\n','\\n')
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)
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2014-01-11 18:16:30 +05:30
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2014-01-24 18:00:27 +05:30
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#--- determine default compiler ----------------------------------------------------------------------
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compiler = os.getenv('F90')
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if compiler == None: compiler ={True:'ifort',False:'gfortran'}[\
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subprocess.call(['which', 'ifort'],\
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stdout=subprocess.PIPE, stderr=subprocess.PIPE) == 0]
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2014-01-11 19:58:07 +05:30
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2014-01-24 18:00:27 +05:30
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#--- default option values --------------------------------------------------------------------------
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2014-02-10 21:00:18 +05:30
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BLAS_order = ['IMKL','ACML','LAPACK']
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2014-02-28 13:17:11 +05:30
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defaults={'DAMASK_BIN':'depending on access rights',
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'F90':compiler,
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2014-02-10 21:46:41 +05:30
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'FFTW_ROOT':'/usr/local',
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'MSC_ROOT' :'/msc',
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'HDF5_ROOT':'/usr/local',
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'DAMASK_NUM_THREADS':4,
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'blasType':'LAPACK',
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'blasRoot':{'LAPACK':'/usr',
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'ACML' :'/opt/acml5.3.1',
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'IMKL' :{True:os.getenv('MKLROOT'), False:'/opt/intel/composerxe/mkl'}\
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[os.getenv('MKLROOT') != None]},
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2014-01-24 18:00:27 +05:30
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'spectralOptions':{}}
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2014-02-28 13:17:11 +05:30
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2014-01-24 18:00:27 +05:30
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#--- if local config file exists, read, otherwise assume global config file ------------------------
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if os.path.isfile(os.path.join(os.getenv('HOME'),'.damask/damask.conf')):
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configFile = os.path.join(os.getenv('HOME'),'.damask/damask.conf')
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else:
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configFile = '/etc/damask.conf'
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#--- set default values according to read in values ------------------------------------------------
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try:
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with open(configFile,'r') as f:
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print('\n-----\n reading default values from %s\n-----'%configFile)
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for line in f:
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2014-02-10 21:00:18 +05:30
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[key,value] = (re.split('[= ]',line)+[None,None])[:2]
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value = value.rstrip()
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2014-02-28 13:17:11 +05:30
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2014-02-10 21:00:18 +05:30
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if (not line.strip() or key.startswith('#')):
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2014-01-24 18:00:27 +05:30
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pass
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2014-02-10 21:00:18 +05:30
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if key == 'DAMASK_NUM_THREADS':
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defaults['DAMASK_NUM_THREADS'] = int(value)
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2014-02-28 13:17:11 +05:30
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if key == 'DAMASK_BIN':
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defaults['DAMASK_BIN'] = value
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2014-02-10 21:00:18 +05:30
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for theKey in ['F90','FFTW_ROOT','HDF5_ROOT','MSC_ROOT','spectralOptions']:
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if key == theKey:
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defaults[key] = value
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for theKey in reversed(BLAS_order):
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if key == theKey+'_ROOT' and (value != None or value != ''):
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2014-02-28 13:17:11 +05:30
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defaults['blasType'] = theKey
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defaults['blasRoot'][theKey] = value
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2014-01-24 18:00:27 +05:30
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except IOError:
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pass
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2014-02-28 13:17:11 +05:30
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parser.add_option('--prefix', dest='prefix', type='string', metavar='string',
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help='location of (links to) DAMASK executables [%default]')
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2014-02-10 21:46:41 +05:30
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parser.add_option('--with-fc', dest='compiler', type='string', metavar='string',
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2014-01-14 19:42:35 +05:30
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help='F90 compiler [%default]')
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2014-02-10 21:46:41 +05:30
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parser.add_option('--with-fftw-dir', dest='fftwRoot', type='string', metavar='string',
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2014-01-14 19:42:35 +05:30
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help='root directory of FFTW [%default]')
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2014-02-10 21:46:41 +05:30
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parser.add_option('--with-msc-dir', dest='mscRoot', type='string', metavar='string',
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2014-01-28 15:19:04 +05:30
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help='root directory of MSC.Marc/Mentat [%default]')
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2014-02-10 21:46:41 +05:30
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parser.add_option('--with-HDF5-dir', dest='hdf5Root', type='string', metavar='string',
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2014-01-24 18:00:27 +05:30
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help='root directory of HDF5 [%default]')
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2014-02-10 21:46:41 +05:30
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parser.add_option('--with-OMP-threads', dest='threads', type='int', metavar='int',
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2014-01-24 18:00:27 +05:30
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help='number of openMP threads [%default]')
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2014-02-10 21:46:41 +05:30
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parser.add_option('--with-blas-type', dest='blasType', type='string', metavar='string',
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2014-01-14 19:42:35 +05:30
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help='type of BLAS/LAPACK library [%default]')
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2014-02-10 21:46:41 +05:30
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parser.add_option('--with-blas-dir', dest='blasRoot', type='string', metavar='string',
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2014-01-24 18:00:27 +05:30
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help='root directory of BLAS/LAPACK library [%default]')
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2014-02-10 21:46:41 +05:30
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parser.add_option('--with-spectral-options', dest='spectraloptions', type='string', action='extend', metavar='<string LIST>',
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2014-01-24 18:00:27 +05:30
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help='options for compilation of spectral solver')
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2014-02-28 13:17:11 +05:30
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parser.set_defaults(prefix = defaults['DAMASK_BIN'])
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2014-01-24 18:00:27 +05:30
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parser.set_defaults(compiler = defaults['F90'])
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parser.set_defaults(fftwRoot = defaults['FFTW_ROOT'])
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2014-01-28 15:19:04 +05:30
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parser.set_defaults(mscRoot = defaults['MSC_ROOT'])
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2014-01-24 18:00:27 +05:30
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parser.set_defaults(hdf5Root = defaults['HDF5_ROOT'])
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parser.set_defaults(threads = defaults['DAMASK_NUM_THREADS'])
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parser.set_defaults(blasType = defaults['blasType'])
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#--- set default for blasRoot depending on current option (or default) for blasType --------------------
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blasType = defaults['blasType'].upper()
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for i, arg in enumerate(sys.argv):
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if arg.startswith('--with-blas-type'):
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if arg.endswith('--with-blas-type'):
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blasType = sys.argv[i+1].upper()
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else:
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blasType = sys.argv[i][17:].upper()
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2014-02-10 21:00:18 +05:30
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if blasType not in BLAS_order:
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2014-02-28 13:17:11 +05:30
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blasType='LAPACK'
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2014-01-11 19:58:07 +05:30
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2014-01-24 18:00:27 +05:30
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parser.set_defaults(blasRoot = [defaults['blasRoot'][blasType]][0])
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2014-01-15 00:33:41 +05:30
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parser.set_defaults(spectraloptions = [])
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2014-01-14 19:42:35 +05:30
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2014-01-11 19:58:07 +05:30
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(options,filenames) = parser.parse_args()
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2014-01-14 19:42:35 +05:30
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2014-01-24 18:00:27 +05:30
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#--- consistency checks --------------------------------------------------------------------------------
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options.compiler=options.compiler.lower()
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options.blasType=options.blasType.upper()
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options.fftwRoot=options.fftwRoot.rstrip('/')
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2014-01-28 15:19:04 +05:30
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options.mscRoot =options.mscRoot.rstrip('/')
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2014-01-24 18:00:27 +05:30
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options.hdf5Root=options.hdf5Root.rstrip('/')
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options.blasRoot=options.blasRoot.rstrip('/')
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if options.compiler not in ['ifort','gfortran']:
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print('Error: Unknown compiler option: %s'%options.compiler)
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sys.exit(1)
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if not subprocess.call(['which', options.compiler],stdout=subprocess.PIPE, stderr=subprocess.PIPE) == 0:
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print('Compiler Warning: executable %s not found!'%options.compiler)
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2014-02-04 01:31:42 +05:30
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fftwLocations =[os.path.join(options.fftwRoot,'lib'),os.path.join(options.fftwRoot,'lib64')]
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2014-02-10 21:46:41 +05:30
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for lib in ['libfftw3.so','libfftw3.a',
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2014-01-29 17:50:56 +05:30
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'libfftw3_threads.so','libfftw3_threads.a']:
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2014-02-04 01:31:42 +05:30
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if (not os.path.isfile(os.path.join(fftwLocations[0],lib))) and \
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(not os.path.isfile(os.path.join(fftwLocations[1],lib))):
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print('FFTW Warning: %s not found in %s or %s!'%(lib,fftwLocations[0],fftwLocations[1]))
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2014-01-24 18:00:27 +05:30
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2014-01-28 15:19:04 +05:30
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if not os.path.isdir(options.mscRoot):
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print('MSC.Marc/Mentat Warning: Root directory %s not found!'%options.mscRoot)
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2014-01-24 18:00:27 +05:30
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if options.blasType == 'LAPACK':
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2014-02-04 01:31:42 +05:30
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lapackLocations =[os.path.join(options.blasRoot,'lib'),os.path.join(options.blasRoot,'lib64')]
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2014-01-27 19:40:49 +05:30
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for lib in ['liblapack.so','liblapack.a']:
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2014-02-04 01:31:42 +05:30
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if (not os.path.isfile(os.path.join(lapackLocations[0],lib))) and \
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(not os.path.isfile(os.path.join(lapackLocations[1],lib))):
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print('LAPACK Warning: %s not found in %s or %s!'%(lib,lapackLocations[0],lapackLocations[1]))
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2014-01-24 18:00:27 +05:30
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elif options.blasType == 'ACML':
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blasLocationSerial=os.path.join(options.blasRoot,'%s64/lib'%options.compiler)
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2014-01-27 19:40:49 +05:30
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for lib in ['libacml.so','libacml.a']:
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2014-01-24 18:00:27 +05:30
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if not os.path.isfile(os.path.join(blasLocationSerial,lib)):
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print('ACML Warning: %s not found in %s!'%(lib,blasLocationSerial))
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blasLocationParallel=os.path.join(options.blasRoot,'%s64_mp/lib'%options.compiler)
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2014-01-27 19:40:49 +05:30
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for lib in ['libacml_mp.so','libacml_mp.a']:
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2014-01-24 18:00:27 +05:30
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if not os.path.isfile(os.path.join(blasLocationParallel,lib)):
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print('ACML Warning: %s not found in %s!'%(lib,blasLocationParallel))
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elif options.blasType == 'IMKL':
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blasLocation=os.path.join(options.blasRoot,'lib/intel64')
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2014-02-10 21:46:41 +05:30
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for lib in ['libmkl_core.so','libmkl_core.a',
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'libmkl_sequential.so','libmkl_sequential.a',
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'libmkl_intel_thread.so','libmkl_intel_thread.a',
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'libmkl_intel_lp64.so','libmkl_intel_lp64.a',
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'libmkl_gnu_thread.so','libmkl_gnu_thread.a',
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'libmkl_gf_lp64.so','libmkl_gf_lp64.a',
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]:
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2014-01-24 18:00:27 +05:30
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if not os.path.isfile(os.path.join(blasLocation,lib)):
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print('IMKL Warning: %s not found in %s!'%(lib,blasLocation))
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else:
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print('Error: Unknown BLAS/LAPACK library: %s'%options.blasType)
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sys.exit(1)
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2014-01-29 17:50:56 +05:30
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#--- read config file if present to keep comments and order ---------------------------------------
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2014-01-14 19:42:35 +05:30
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output = []
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2014-01-24 18:00:27 +05:30
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try:
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with open(configFile,'r') as f:
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for line in f:
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items = re.split('[= ]',line)
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2014-01-14 19:42:35 +05:30
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2014-01-24 18:00:27 +05:30
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if (not line.strip() or items[0].startswith('#')):
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pass
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2014-02-28 13:17:11 +05:30
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if items[0] == 'DAMASK_BIN':
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line = '%s=%s\n'%(items[0],options.prefix)
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options.prefix ='depending on access rights'
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2014-01-24 18:00:27 +05:30
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if items[0] == 'F90':
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line = '%s=%s\n'%(items[0],options.compiler)
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options.compiler =''
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if items[0] == 'FFTW_ROOT':
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line = '%s=%s\n'%(items[0],options.fftwRoot)
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options.fftwRoot =''
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2014-01-28 15:19:04 +05:30
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if items[0] == 'MSC_ROOT':
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line = '%s=%s\n'%(items[0],options.mscRoot)
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options.mscRoot =''
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2014-01-24 18:00:27 +05:30
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if items[0] == 'HDF5_ROOT':
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line = '%s=%s\n'%(items[0],options.hdf5Root)
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options.hdf5Root =''
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if items[0] == 'DAMASK_NUM_THREADS':
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line = '%s=%s\n'%(items[0],options.threads)
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options.threads =''
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for blasType in defaults['blasRoot'].keys():
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if items[0] == '%s_ROOT'%blasType and items[0] == '%s_ROOT'%options.blasType:
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line = '%s=%s\n'%(items[0],options.blasRoot)
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options.blasType=''
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2014-01-29 17:50:56 +05:30
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elif items[0] == '#%s_ROOT'%blasType and items[0] == '#%s_ROOT'%options.blasType:
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line = '%s=%s\n'%(items[0][1:],options.blasRoot)
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options.blasType=''
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2014-01-24 18:00:27 +05:30
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elif items[0] == '%s_ROOT'%blasType: line = '#'+line
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for spectralOption in options.spectraloptions:
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[key,value] = re.split('[= ]',spectralOption)[0:2]
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if key == items[0]:
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line = '%s=%s\n'%(items[0],value)
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options.spectraloptions.remove(spectralOption)
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output.append(line)
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except IOError:
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pass
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#--- write remaining options --------------------------------------------------------------------------
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for opt, value in options.__dict__.items():
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2014-02-28 13:17:11 +05:30
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if opt == 'prefix' and value !='depending on access rights':
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output.append('DAMASK_BIN=%s\n'%value)
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2014-01-24 18:00:27 +05:30
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if opt == 'compiler' and value !='':
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output.append('F90=%s\n'%value)
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if opt == 'fftwRoot' and value !='':
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output.append('FFTW_ROOT=%s\n'%value)
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2014-01-28 15:19:04 +05:30
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if opt == 'mscRoot' and value !='':
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output.append('MSC_ROOT=%s\n'%value)
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2014-01-24 18:00:27 +05:30
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if opt == 'hdf5Root' and value !='':
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output.append('HDF5_ROOT=%s\n'%value)
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if opt == 'threads' and value !='':
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output.append('DAMASK_NUM_THREADS=%s\n'%value)
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if opt == 'blasType' and value !='':
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2014-01-27 15:42:29 +05:30
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output.append('%s_ROOT=%s\n'%(options.blasType,options.blasRoot))
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2014-01-24 18:00:27 +05:30
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2014-01-15 00:33:41 +05:30
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for spectralOption in options.spectraloptions:
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output.append(spectralOption+'\n')
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2014-01-14 19:42:35 +05:30
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2014-02-28 13:17:11 +05:30
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#--- decide where do save the data -------------------------------------------------------------------
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if os.access('/etc/', os.W_OK): # super user (no home)
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configDir = '/etc'
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else: # normal user
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configDir = os.path.join(os.getenv('HOME'),'.damask')
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configFileNew = os.path.join(configDir,'damask.conf')
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2014-01-24 18:00:27 +05:30
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print('\n-----\n writing values to %s\n-----'%configFileNew)
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with open(configFileNew,'w') as f:
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2014-01-14 19:42:35 +05:30
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for line in output:
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2014-01-29 17:50:56 +05:30
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print(line.rstrip('\n'))
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2014-01-14 19:42:35 +05:30
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f.write(line)
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