DAMASK_EICMD/lib/damask/asciitable.py

213 lines
6.5 KiB
Python

# $Id$
class ASCIItable():
'''
There should be a doc string here :)
'''
import sys,numpy
__slots__ = ['__IO__',
'info',
'labels',
'data',
]
# ------------------------------------------------------------------
def __init__(self,
fileIn = sys.stdin,
fileOut = sys.stdout,
buffered = True):
self.__IO__ = {'in': fileIn,
'out':fileOut,
'output':[],
'buffered':buffered,
'validReadSize': 0,
'dataStart': 0,
}
self.info = []
self.labels = []
self.data = []
# ------------------------------------------------------------------
def _transliterateToFloat(self,x):
try:
return float(x)
except:
return 0.0
# ------------------------------------------------------------------
def output_write(self,
what):
if isinstance(what,list):
for item in what: self.output_write(item)
else:
self.__IO__['output'] += [str(what)]
return self.__IO__['buffered'] or self.output_flush()
# ------------------------------------------------------------------
def output_flush(self,
clear = True):
import sys
try:
self.__IO__['output'] == [] or self.__IO__['out'].write('\n'.join(self.__IO__['output']) + '\n')
except IOError, e:
return False
if clear: self.output_clear()
return True
# ------------------------------------------------------------------
def output_clear(self):
self.__IO__['output'] = []
# ------------------------------------------------------------------
def head_read(self):
'''
get column labels by either read the first row, or
--if keyword "head[*]" is present-- the last line of the header
'''
import re
try:
self.__IO__['in'].seek(0)
except:
pass
firstline = self.__IO__['in'].readline()
m = re.search('(\d+)\s*head', firstline.lower())
if m:
self.info = [self.__IO__['in'].readline().strip() for i in xrange(1,int(m.group(1)))]
self.labels = self.__IO__['in'].readline().split()
else:
self.info = []
self.labels = firstline.split()
self.__IO__['validReadSize'] = len(self.labels)
try:
self.__IO__['dataStart'] = self.__IO__['in'].tell()
except IOError:
pass
# ------------------------------------------------------------------
def head_write(self):
'''
write current header information (info + labels)
'''
return self.output_write (['%i\theader'%(len(self.info)+1),
self.info,
'\t'.join(self.labels)])
# ------------------------------------------------------------------
def labels_append(self,
what):
'''
add item or list to existing set of labels
'''
if isinstance(what,list):
for item in what: self.labels_append(item)
else: self.labels += [str(what)]
# ------------------------------------------------------------------
def labels_index(self,
labels):
'''
tell index of column label(s)
'''
if isinstance(labels,list):
idx = []
for label in labels:
try:
idx.append(self.labels.index(label))
except ValueError:
idx.append(-1)
else:
try:
idx = self.labels.index(labels)
except ValueError:
idx = -1
return idx
# ------------------------------------------------------------------
def info_append(self,
what):
if isinstance(what,list):
for item in what: self.info_append(item)
else: self.info += [str(what)]
# ------------------------------------------------------------------
def info_clear(self):
self.info = []
# ------------------------------------------------------------------
def data_rewind(self):
self.__IO__['in'].seek(self.__IO__['dataStart'])
# ------------------------------------------------------------------
def data_skipLines(self,lines):
for i in range(lines):
self.__IO__['in'].readline()
# ------------------------------------------------------------------
def data_read(self):
line = self.__IO__['in'].readline()
items = line.split()[:self.__IO__['validReadSize']] # get next data row
self.data = {False: [],
True: items}[len(items) == self.__IO__['validReadSize']] # take if correct number of entries
return self.data != []
# ------------------------------------------------------------------
def data_readLine(self,line):
self.__IO__['in'].seek(self.__IO__['dataStart'])
for i in range(line-1):
self.__IO__['in'].readline()
self.data_read()
# ------------------------------------------------------------------
def data_write(self):
if len(self.data) == 0: return
if isinstance(self.data[0],list):
return self.output_write (['\t'.join(map(str,items)) for items in self.data])
else:
return self.output_write ('\t'.join(map(str,self.data)))
# ------------------------------------------------------------------
def data_append(self,
what):
if isinstance(what,list):
for item in what: self.data_append(item)
else: self.data += [str(what)]
# ------------------------------------------------------------------
def data_set(self,
what,where):
idx = -1
try:
idx = self.labels.index(where)
if len(self.data) <= idx:
self.data_append(['n/a' for i in xrange(idx+1-len(self.data))]) # grow data if too short
self.data[idx] = str(what)
except ValueError:
pass
return idx
# ------------------------------------------------------------------
def data_clear(self):
self.data = []
# ------------------------------------------------------------------
def data_asFloat(self):
return map(self._transliterateToFloat,self.data)
# ------------------------------------------------------------------
def data_asArray(self,
labels = []):
import numpy
'''
read whole data of all (given) labels as numpy array
'''
if labels == []: indices = range(self.__IO__['validReadSize']) # use all columns
else: indices = self.labels_index(labels) # use specified columns
self.data_rewind()
return numpy.loadtxt(self.__IO__['in'], usecols=indices)