54 lines
2.0 KiB
Python
54 lines
2.0 KiB
Python
class MSC_TOOLS():
|
|
import string
|
|
|
|
|
|
def submit_job(self,
|
|
run_marc_path='/msc/marc2010/tools/',
|
|
subroutine_dir='../../../code/',
|
|
subroutine_name='DAMASK_marc2010',
|
|
compile='yes',
|
|
compiled_dir='../../../code/',
|
|
modelname='one_element_model',
|
|
jobname='job1',
|
|
#IOdir='',
|
|
host=[]
|
|
):
|
|
import subprocess, shlex
|
|
import shutil
|
|
# Define all options [see Marc Installation and Operation Guide, pp 23]
|
|
run_marc=run_marc_path+'run_marc'
|
|
jid=' -jid '+modelname+'_'+jobname
|
|
compilation=' -u '+subroutine_dir+subroutine_name+'.f90'+' -save y'
|
|
options=' -nprocd 1 -autorst 0 -ci n -cr n -dcoup 0 -b no -v no'
|
|
cmd=run_marc+jid+options
|
|
|
|
if compile=='yes' or compile=='y':
|
|
cmd=cmd+compilation
|
|
print 'Job submission with compilation.'
|
|
else:
|
|
shutil.copy2(subroutine_dir+subroutine_name+'.f90','./'+subroutine_name+'.f90')
|
|
shutil.copy2(compiled_dir+subroutine_name+'.marc','./'+subroutine_name+'.marc')
|
|
prog=' -prog '+subroutine_name
|
|
cmd=cmd+prog
|
|
print 'Job submission without compilation, using %s'%prog
|
|
out=open('out.log','w')
|
|
print(cmd)
|
|
print shlex.split(cmd)
|
|
self.p=subprocess.Popen(shlex.split(cmd),stdout=out,stderr=subprocess.STDOUT)
|
|
self.p.wait()
|
|
out.close()
|
|
|
|
def exit_number_from_outFile(self,outFile=None):
|
|
import string
|
|
fid_out=open(outFile,'r')
|
|
for ln in fid_out:
|
|
if (string.find(ln,'tress iteration') is not -1):
|
|
print ln
|
|
elif (string.find(ln,'Exit number') is not -1):
|
|
substr=ln[string.find(ln,'Exit number'):len(ln)]
|
|
exitnumber=substr[12:16]
|
|
fid_out.close()
|
|
return int(exitnumber)
|
|
fid_out.close()
|
|
return -1
|