136 lines
5.9 KiB
Python
Executable File
136 lines
5.9 KiB
Python
Executable File
#!/usr/bin/env python
|
|
# -*- coding: UTF-8 no BOM -*-
|
|
|
|
import os,sys,glob,string,subprocess,shlex
|
|
from damask import Environment
|
|
from damask import version as DAMASKVERSION
|
|
|
|
# compiles fortran code for Python
|
|
scriptID = '$Id$'
|
|
|
|
damaskEnv = Environment()
|
|
baseDir = damaskEnv.relPath('installation/')
|
|
codeDir = damaskEnv.relPath('code/')
|
|
|
|
keywords=['IMKL_ROOT','ACML_ROOT','LAPACK_ROOT','FFTW_ROOT','F90']
|
|
options={}
|
|
|
|
#--- getting options from damask.conf or, if not present, from envinronment -----------------------
|
|
for option in keywords:
|
|
try:
|
|
value = damaskEnv.options[option]
|
|
except:
|
|
value = os.getenv(option)
|
|
if value is None: value = '' # env not set
|
|
options[option]=value
|
|
|
|
#--- overwrite default options with keyword=value pair from argument list to mimic make behavior --
|
|
for i, arg in enumerate(sys.argv):
|
|
for option in keywords:
|
|
if arg.startswith(option):
|
|
options[option] = sys.argv[i][len(option)+1:]
|
|
|
|
#--- check for valid compiler and set options -----------------------------------------------------
|
|
compilers = ['ifort','gfortran']
|
|
if options['F90'] not in compilers:
|
|
sys.exit('compiler "F90" (in installation/options or as Shell variable) has to be one out of: %s'%(', '.join(compilers)))
|
|
|
|
compiler = {
|
|
'gfortran': '--fcompiler=gnu95 --f90flags="-fPIC -fno-range-check -xf95-cpp-input -std=f2008 -fall-intrinsics'+\
|
|
' -fdefault-real-8 -fdefault-double-8"',
|
|
'ifort': '--fcompiler=intelem --f90flags="-fPIC -fpp -stand f08 -diag-disable 5268 -assume byterecl'+\
|
|
' -real-size 64 -integer-size 32 -shared-intel"',
|
|
}[options['F90']]
|
|
|
|
#--- option not depending on compiler -------------------------------------------------------------
|
|
compileOptions = ' -DSpectral -DFLOAT=8 -DINT=4 -I%s/lib -DDAMASKVERSION=\\\\\"\\\"%s\\\\\"\\\"'%(damaskEnv.rootDir(),DAMASKVERSION)
|
|
|
|
#--- this saves the path of libraries to core.so, hence it is known during runtime ----------------
|
|
if options['F90'] == 'gfortran':
|
|
LDFLAGS = '-shared -Wl,-undefined,dynamic_lookup' # solved error: Undefined symbols for architecture x86_64: "_PyArg_ParseTupleAndKeywords" as found on https://lists.macosforge.org/pipermail/macports-dev/2013-May/022735.html
|
|
else:
|
|
LDFLAGS = ' -openmp -Wl' # some f2py versions/configurations compile with openMP, so linking against openMP is needed to prevent errors during loading of core module
|
|
|
|
#--- run path of for fftw during runtime ----------------------------------------------------------
|
|
LDFLAGS += ',-rpath,%s/lib,-rpath,%s/lib64'%(options['FFTW_ROOT'],options['FFTW_ROOT'])
|
|
|
|
# see http://cens.ioc.ee/pipermail/f2py-users/2003-December/000621.html
|
|
if options['IMKL_ROOT']:
|
|
if options['F90'] == 'gfortran':
|
|
arch = 'gf'
|
|
elif options['F90'] == 'ifort':
|
|
arch = 'intel'
|
|
lib_lapack = '-L%s/lib/intel64 -lmkl_%s_lp64 -lmkl_core -lmkl_sequential -lm'\
|
|
%(options['IMKL_ROOT'],arch)
|
|
LDFLAGS +=',-rpath,%s/lib/intel64'%(options['IMKL_ROOT'])
|
|
elif options['ACML_ROOT'] != '':
|
|
lib_lapack = '-L%s/%s64/lib -lacml'%(options['ACML_ROOT'],options['F90'])
|
|
LDFLAGS +=',-rpath,%s/%s64/lib'%(options['ACML_ROOT'],options['F90'])
|
|
elif options['LAPACK_ROOT'] != '':
|
|
lib_lapack = '-L%s/lib -L%s/lib64 -llapack'%(options['LAPACK_ROOT'],options['LAPACK_ROOT'])
|
|
LDFLAGS +=',-rpath,%s/lib,-rpath,%s/lib64'%(options['LAPACK_ROOT'],options['LAPACK_ROOT'])
|
|
|
|
#--------------------------------------------------------------------------------------------------
|
|
# f2py does not (yet) support setting of special flags for the linker, hence they must be set via
|
|
# environment variable ----------------------------------------------------------------------------
|
|
my_env = os.environ
|
|
my_env["LDFLAGS"] = LDFLAGS
|
|
|
|
#--- delete old file ------------------------------------------------------------------------------
|
|
try:
|
|
os.remove(os.path.join(damaskEnv.relPath('lib/damask'),'core.so'))
|
|
except OSError, e:
|
|
print ("Error when deleting: %s - %s." % (e.filename,e.strerror))
|
|
|
|
|
|
# The following command is used to compile the fortran files and make the functions defined
|
|
# in damask.core.pyf available for python in the module core.so
|
|
# It uses the fortran wrapper f2py that is included in the numpy package to construct the
|
|
# module core.so out of the fortran code in the f90 files
|
|
# For the generation of the pyf file use the following lines:
|
|
###########################################################################
|
|
#'f2py -h damask.core.pyf' +\
|
|
#' --overwrite-signature --no-lower prec.f90 DAMASK_spectral_interface.f90 math.f90 mesh.f90,...'
|
|
###########################################################################
|
|
os.chdir(codeDir)
|
|
cmd = 'f2py damask.core.pyf' +\
|
|
' -c --no-lower %s'%(compiler) +\
|
|
compileOptions+\
|
|
' prec.f90'+\
|
|
' spectral_interface.f90'+\
|
|
' IO.f90'+\
|
|
' libs.f90'+\
|
|
' numerics.f90'+\
|
|
' debug.f90'+\
|
|
' math.f90'+\
|
|
' FEsolving.f90'+\
|
|
' mesh.f90'+\
|
|
' core_quit.f90'+\
|
|
' -L%s/lib -lfftw3'%(options['FFTW_ROOT'])+\
|
|
' %s'%lib_lapack
|
|
|
|
print('Executing: '+cmd)
|
|
try:
|
|
subprocess.call(shlex.split(cmd),env=my_env)
|
|
except subprocess.CalledProcessError:
|
|
print('build failed')
|
|
except OSError:
|
|
print ('f2py not found')
|
|
|
|
try:
|
|
os.rename(os.path.join(codeDir,'core.so'),\
|
|
os.path.join(damaskEnv.relPath('lib/damask'),'core.so'))
|
|
except:
|
|
pass
|
|
|
|
modules = glob.glob('*.mod')
|
|
for module in modules:
|
|
print 'removing', module
|
|
os.remove(module)
|
|
|
|
#--- check if compilation of core module was successful -------------------------------------------
|
|
try:
|
|
with open(damaskEnv.relPath('lib/damask/core.so')) as f: pass
|
|
except IOError as e:
|
|
print '*********\n* core.so not found, compilation of core modules was not successful\n*********'
|