DAMASK_EICMD/installation/mods_MarcMentat/apply_DAMASK_modifications

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#!/bin/bash
DEFAULT_VERSION='2013.1'
WORKINGDIR=`dirname $0`
while [ ! -d "$WORKINGDIR/$VERSION" ] || [ -z "$VERSION" ]
do
echo "Input version of MARC/MENTAT installation: [${DEFAULT_VERSION}]"
read VERSION
if [ -z "$VERSION" ]; then
VERSION=${DEFAULT_VERSION}
fi
done
echo "MSC version: $VERSION"
INSTALLDIR=''
if [ -f $WORKINGDIR/../../lib/pathinfo ]; then
INSTALLDIR=`grep -vE "^[[:space:]]*#|^$" $WORKINGDIR/../../lib/pathinfo | grep -i msc | head -n1 | awk 'BEGIN { FS = "[ \t]+" } ; { print $2 }'`
fi
while [ ! -d "$INSTALLDIR" ] || [ -z "$INSTALLDIR" ]
do
echo "Input path of MARC/MENTAT installation:"
read INSTALLDIR
done
INSTALLDIR=${INSTALLDIR%/} # remove trailing slash
echo "MSC installation path: $INSTALLDIR"
BLASDIR=''
BLASTYPE=''
if [ -f $WORKINGDIR/../../lib/pathinfo ]; then
IMKLDIR=`grep -vE "^[[:space:]]*#|^$" $WORKINGDIR/../../lib/pathinfo | grep -i imkl | head -n1 | awk 'BEGIN { FS = "[ \t]+" } ; { print $2 }'`
ACMLDIR=`grep -vE "^[[:space:]]*#|^$" $WORKINGDIR/../../lib/pathinfo | grep -i acml | head -n1 | awk 'BEGIN { FS = "[ \t]+" } ; { print $2 }'`
LAPACKDIR=`grep -vE "^[[:space:]]*#|^$" $WORKINGDIR/../../lib/pathinfo | grep -i lapack | head -n1 | awk 'BEGIN { FS = "[ \t]+" } ; { print $2 }'`
if [ -d "$IMKLDIR" ]; then
BLASDIR=$IMKLDIR
BLASTYPE='IMKL'
elif [ -d "$ACMLDIR" ]; then
BLASDIR=$ACMLDIR
BLASTYPE='ACML'
elif [ -d "$LAPACKDIR" ]; then
BLASDIR=$LAPACKDIR
BLASTYPE='LAPACK'
fi
fi
while [ ! -d "$BLASDIR" ] || [ -z "$BLASDIR" ]
do
echo "Input type of BLAS installation [IMKL | ACML | LAPACK]:"
read BLASTYPE
echo "Input path of BLAS installation:"
read BLASDIR
done
BLASDIR=${BLASDIR%/} # remove trailing slash
case $BLASTYPE in
IMKL | imkl)
BLAS=" -mkl"
;;
ACML | acml)
BLAS=" -L$BLASDIR/ifort64_mp/lib -lacml_mp"
;;
LAPACK | lapack)
BLAS=" -L$BLASDIR/lib64 -L$BLASDIR/lib -llapack"
;;
*)
echo "error, BLAS type must be IMKL, ACML, or LAPACK"
exit
;;
esac
DEFAULT_EDITOR='vi'
EDITOR=''
while [ -z "$EDITOR" ]
do
echo "Input command to invoke your preferred editor: [${DEFAULT_EDITOR}]"
read EDITOR
if [ -z "$EDITOR" ]; then
EDITOR=${DEFAULT_EDITOR}
fi
done
echo "Editor: $EDITOR"
# tools
echo ''
echo 'copying Marc tools...'
theDIR=$INSTALLDIR/marc$VERSION/tools
for filename in 'comp_damask' \
'comp_damask_l' \
'comp_damask_h' \
'comp_damask_mp' \
'comp_damask_lmp' \
'comp_damask_hmp' \
'run_damask' \
'run_damask_l' \
'run_damask_h' \
'run_damask_mp' \
'run_damask_lmp' \
'run_damask_hmp' \
'include_linux64'; do
cp $WORKINGDIR/$VERSION/Marc_tools/$filename $theDIR
echo $theDIR/$filename | xargs perl -pi -e "s:%INSTALLDIR%:${INSTALLDIR}:g"
echo $theDIR/$filename | xargs perl -pi -e "s:%VERSION%:${VERSION}:g"
echo $theDIR/$filename | xargs perl -pi -e "s:%BLAS%:${BLAS}:g"
echo $filename
done
# Mentat scripts
echo ''
echo 'copying Mentat scripts...'
theDIR=$INSTALLDIR/mentat$VERSION/bin
for filename in 'edit_window' \
'submit4' \
'submit5' \
'submit6' \
'submit7' \
'submit8' \
'submit9' \
'kill4' \
'kill5' \
'kill6' \
'kill7' \
'kill8' \
'kill9'; do
cp $WORKINGDIR/$VERSION/Mentat_bin/$filename $theDIR
echo $theDIR/$filename | xargs perl -pi -e "s:%INSTALLDIR%:${INSTALLDIR}:g"
echo $theDIR/$filename | xargs perl -pi -e "s:%VERSION%:${VERSION}:g"
echo $theDIR/$filename | xargs perl -pi -e "s:%EDITOR%:${EDITOR}:g"
echo $filename
done
# Mentat scripts
echo ''
echo 'copying Mentat menus...'
theDIR=$INSTALLDIR/mentat$VERSION/menus
for filename in 'job_run.ms'; do
cp $WORKINGDIR/$VERSION/Mentat_menus/$filename $theDIR
echo $theDIR/$filename | xargs perl -pi -e "s:%INSTALLDIR%:${INSTALLDIR}:g"
echo $theDIR/$filename | xargs perl -pi -e "s:%VERSION%:${VERSION}:g"
echo $filename
done
# compile menus
echo ''
echo 'compiling menus...'
$INSTALLDIR/mentat$VERSION/bin/mentat -compile $INSTALLDIR/mentat$VERSION/menus/linux64/main.msb
# setting access rights
echo ''
echo 'setting file access rights...'
chmod 555 $INSTALLDIR/marc$VERSION/tools/run_damask*
chmod 555 $INSTALLDIR/marc$VERSION/tools/comp_damask*
chmod 555 $INSTALLDIR/mentat$VERSION/bin/submit{4..9}
chmod 555 $INSTALLDIR/mentat$VERSION/bin/kill{4..9}
#creating symlinks for run_damask_scripts in /usr/local/bin
BIN_DIR=/usr/local/bin
echo ''
echo "Do you want to create symlinks for run_damask scripts in ${BIN_DIR} [YES/no] ?"
read YESNO
if [ -z "$YESNO" ]; then
YESNO=yes
fi
case $YESNO in
y* | Y* )
echo''
echo 'creating symlinks ...'
echo''
theDIR=$INSTALLDIR/marc$VERSION/tools
for filename in 'run_damask' \
'run_damask_l' \
'run_damask_h' \
'run_damask_mp' \
'run_damask_lmp' \
'run_damask_hmp'; do
echo ${filename:4}$VERSION
ln -s $theDIR/$filename $BIN_DIR/${filename:4}$VERSION
done
;;
esac
echo ''
echo 'done.'