DAMASK_EICMD/python/damask/util.py

280 lines
7.6 KiB
Python

import sys
import datetime
import os
import subprocess
import shlex
import fractions
from functools import reduce
from optparse import Option
import numpy as np
class bcolors:
"""
ASCII Colors.
https://svn.blender.org/svnroot/bf-blender/trunk/blender/build_files/scons/tools/bcolors.py
https://stackoverflow.com/questions/287871
"""
HEADER = '\033[95m'
OKBLUE = '\033[94m'
OKGREEN = '\033[92m'
WARNING = '\033[93m'
FAIL = '\033[91m'
ENDC = '\033[0m'
BOLD = '\033[1m'
DIM = '\033[2m'
UNDERLINE = '\033[4m'
CROSSOUT = '\033[9m'
def disable(self):
self.HEADER = ''
self.OKBLUE = ''
self.OKGREEN = ''
self.WARNING = ''
self.FAIL = ''
self.ENDC = ''
self.BOLD = ''
self.UNDERLINE = ''
self.CROSSOUT = ''
def srepr(arg,glue = '\n'):
r"""
Join arguments as individual lines.
Parameters
----------
arg : iterable
Items to join.
glue : str, optional
Defaults to \n.
"""
if (not hasattr(arg, "strip") and
(hasattr(arg, "__getitem__") or
hasattr(arg, "__iter__"))):
return glue.join(str(x) for x in arg)
return arg if isinstance(arg,str) else repr(arg)
def croak(what, newline = True):
"""
Write formated to stderr.
Parameters
----------
what : str or iterable
Content to be displayed.
newline : bool, optional
Separate items of what by newline. Defaults to True.
"""
if what:
sys.stderr.write(srepr(what,glue = '\n') + ('\n' if newline else ''))
sys.stderr.flush()
def report(who = None,
what = None):
"""
Reports script and file name.
DEPRECATED
"""
croak( (emph(who)+': ' if who is not None else '') + (what if what is not None else '') + '\n' )
def emph(what):
"""Formats string with emphasis."""
return bcolors.BOLD+srepr(what)+bcolors.ENDC
def deemph(what):
"""Formats string with deemphasis."""
return bcolors.DIM+srepr(what)+bcolors.ENDC
def delete(what):
"""Formats string as deleted."""
return bcolors.DIM+srepr(what)+bcolors.ENDC
def strikeout(what):
"""Formats string as strikeout."""
return bcolors.CROSSOUT+srepr(what)+bcolors.ENDC
def execute(cmd,
streamIn = None,
wd = './',
env = None):
"""
Execute command.
Parameters
----------
cmd : str
Command to be executed.
streanIn :, optional
Input (via pipe) for executed process.
wd : str, optional
Working directory of process. Defaults to ./ .
env : dict, optional
Environment for execution.
"""
initialPath = os.getcwd()
os.chdir(wd)
myEnv = os.environ if env is None else env
process = subprocess.Popen(shlex.split(cmd),
stdout = subprocess.PIPE,
stderr = subprocess.PIPE,
stdin = subprocess.PIPE,
env = myEnv)
out,error = [i for i in (process.communicate() if streamIn is None
else process.communicate(streamIn.read().encode('utf-8')))]
out = out.decode('utf-8').replace('\x08','')
error = error.decode('utf-8').replace('\x08','')
os.chdir(initialPath)
if process.returncode != 0:
raise RuntimeError('{} failed with returncode {}'.format(cmd,process.returncode))
return out,error
class extendableOption(Option):
"""
Used for definition of new option parser action 'extend', which enables to take multiple option arguments.
Adopted from online tutorial http://docs.python.org/library/optparse.html
DEPRECATED
"""
ACTIONS = Option.ACTIONS + ("extend",)
STORE_ACTIONS = Option.STORE_ACTIONS + ("extend",)
TYPED_ACTIONS = Option.TYPED_ACTIONS + ("extend",)
ALWAYS_TYPED_ACTIONS = Option.ALWAYS_TYPED_ACTIONS + ("extend",)
def take_action(self, action, dest, opt, value, values, parser):
if action == "extend":
lvalue = value.split(",")
values.ensure_value(dest, []).extend(lvalue)
else:
Option.take_action(self, action, dest, opt, value, values, parser)
class _ProgressBar:
"""
Report progress of an interation as a status bar.
Works for 0-based loops, ETA is estimated by linear extrapolation.
"""
def __init__(self,total,prefix,bar_length):
"""
Inititalize a progress bar to current time as basis for ETA estimation.
Parameters
----------
total : int
Total # of iterations.
prefix : str
Prefix string.
bar_length : int
Character length of bar.
"""
self.total = total
self.prefix = prefix
self.bar_length = bar_length
self.start_time = datetime.datetime.now()
self.last_fraction = 0.0
sys.stderr.write('{} {} 0% ETA n/a'.format(self.prefix, ''*self.bar_length))
sys.stderr.flush()
def update(self,iteration):
fraction = (iteration+1) / self.total
if int(self.bar_length * fraction) > int(self.bar_length * self.last_fraction):
delta_time = datetime.datetime.now() - self.start_time
remaining_time = (self.total - (iteration+1)) * delta_time / (iteration+1)
remaining_time -= datetime.timedelta(microseconds=remaining_time.microseconds) # remove μs
filled_length = int(self.bar_length * fraction)
bar = '' * filled_length + '' * (self.bar_length - filled_length)
sys.stderr.write('\r{} {} {:>4.0%} ETA {}'.format(self.prefix, bar, fraction, remaining_time))
sys.stderr.flush()
self.last_fraction = fraction
if iteration == self.total - 1:
sys.stderr.write('\n')
sys.stderr.flush()
def show_progress(iterable,N_iter=None,prefix='',bar_length=50):
"""
Decorate a loop with a status bar.
Use similar like enumerate.
Parameters
----------
iterable : iterable/function with yield statement
Iterable (or function with yield statement) to be decorated.
N_iter : int
Total # of iterations. Needed if number of iterations can not be obtained as len(iterable).
prefix : str, optional.
Prefix string.
bar_length : int, optional
Character length of bar. Defaults to 50.
"""
status = _ProgressBar(N_iter if N_iter else len(iterable),prefix,bar_length)
for i,item in enumerate(iterable):
yield item
status.update(i)
def scale_to_coprime(v):
"""Scale vector to co-prime (relatively prime) integers."""
MAX_DENOMINATOR = 1000
def get_square_denominator(x):
"""Denominator of the square of a number."""
return fractions.Fraction(x ** 2).limit_denominator(MAX_DENOMINATOR).denominator
def lcm(a, b):
"""Least common multiple."""
return a * b // np.gcd(a, b)
denominators = [int(get_square_denominator(i)) for i in v]
s = reduce(lcm, denominators) ** 0.5
m = (np.array(v)*s).astype(np.int)
return m//reduce(np.gcd,m)
class return_message:
"""Object with formatted return message."""
def __init__(self,message):
"""
Sets return message.
Parameters
----------
message : str or list of str
message for output to screen
"""
self.message = message
def __repr__(self):
"""Return message suitable for interactive shells."""
return srepr(self.message)