#!/usr/bin/env python # -*- coding: UTF-8 no BOM -*- ''' Writes meaningful labels to the marc input file (*.dat) based on the files .output that are written during the first run of the model. ''' import sys,os,re from optparse import OptionParser scriptID = string.replace('$Id$','\n','\\n') scriptName = scriptID.split()[1][:-3] # ----------------------------- def ParseOutputFormat(filename,what,me): # ----------------------------- format = {'outputs':{},'specials':{'brothers':[]}} outputmetafile = filename+'.output'+what try: file = open(outputmetafile) except: print('Could not open file %s'%outputmetafile) raise else: content = file.readlines() file.close() tag = '' tagID = 0 for line in content: if re.match("\s*$",line) or re.match("#",line): # skip blank lines and comments continue m = re.match("\[(.+)\]",line) # look for block indicator if m: # next section tag = m.group(1) tagID += 1 format['specials']['brothers'].append(tag) if tag == me or (me.isdigit() and tagID == int(me)): format['specials']['_id'] = tagID format['outputs'] = [] tag = me else: # data from section if tag == me: (output,length) = line.split() output.lower() if length.isdigit(): length = int(length) if re.match("\((.+)\)",output): # special data, (e.g. (Ngrains) format['specials'][output] = length elif length > 0: format['outputs'].append([output,length]) return format parser = OptionParser(usage='%prog [options] Marc.inputfile(s)', description=""" Transfer the output variables requested in the material.config to properly labelled user defined variables within the Marc input file (*.dat). Requires the files .output that are written during the first run of the model. Specify which user block format you want to apply by stating the homogenization, crystallite, and phase identifiers. Or have an existing set of user variables copied over from another *.dat file. """) parser.add_option('-n','--number', dest='number', type='int', \ help='maximum requested User Defined Variable [%default]') parser.add_option('--homogenization', dest='homog', \ help='homogenization identifier (as string or integer [%default])') parser.add_option('--crystallite', dest='cryst', \ help='crystallite identifier (as string or integer [%default])') parser.add_option('--phase', dest='phase', \ help='phase identifier (as string or integer [%default])') parser.add_option('--use', dest='useFile', \ help='Optionally parse output descriptors from '+ 'different .outputZZZ file. Saves the effort '+ 'to start a calculation for each job [%default])') parser.add_option('--option', dest='damaskOption', \ help='Add damask option to input file '+ 'for example: "periodic x z" [%default]') parser.set_defaults(number = 0) parser.set_defaults(homog = '1') parser.set_defaults(cryst = '1') parser.set_defaults(phase = '1') parser.set_defaults(useFile = '') parser.set_defaults(damaskOption = '') (options, files) = parser.parse_args() if not files: parser.print_help() parser.error('no file(s) specified...') me = { 'Homogenization': options.homog, 'Crystallite': options.cryst, 'Constitutive': options.phase, } for file in files: print '\033[1m'+scriptName+'\033[0m: '+file+'\n' if options.useFile != '': formatFile = os.path.splitext(options.useFile)[0] else: formatFile = os.path.splitext(file)[0] file = os.path.splitext(file)[0]+'.dat' if not os.path.lexists(file): print file,'not found' continue print('Scanning format files of: %s'%formatFile) if options.number < 1: outputFormat = {} for what in me: outputFormat[what] = ParseOutputFormat(formatFile,what,me[what]) if not '_id' in outputFormat[what]['specials']: print "'%s' not found in <%s>"%(me[what],what) print '\n'.join(map(lambda x:' '+x,outputFormat[what]['specials']['brothers'])) sys.exit(1) UserVars = ['HomogenizationCount'] for var in outputFormat['Homogenization']['outputs']: if var[1] > 1: UserVars += ['%i_%s'%(i+1,var[0]) for i in range(var[1])] else: UserVars += ['%s'%(var[0]) for i in range(var[1])] UserVars += ['GrainCount'] for grain in range(outputFormat['Homogenization']['specials']['(ngrains)']): UserVars += ['%i_CrystalliteCount'%(grain+1)] for var in outputFormat['Crystallite']['outputs']: if var[1] > 1: UserVars += ['%i_%i_%s'%(grain+1,i+1,var[0]) for i in range(var[1])] else: UserVars += ['%i_%s'%(grain+1,var[0]) for i in range(var[1])] UserVars += ['%i_ConstitutiveCount'%(grain+1)] for var in outputFormat['Constitutive']['outputs']: if var[1] > 1: UserVars += ['%i_%i_%s'%(grain+1,i+1,var[0]) for i in range(var[1])] else: UserVars += ['%i_%s'%(grain+1,var[0]) for i in range(var[1])] # Now change *.dat file(s) print('Adding labels to: %s'%file) inFile = open(file) input = inFile.readlines() inFile.close() output = open(file,'w') thisSection = '' if options.damaskOption: output.write('$damask {0}\n'.format(options.damaskOption)) for line in input: m = re.match('(\w+)\s',line) if m: lastSection = thisSection thisSection = m.group(1) if (lastSection == 'post' and thisSection == 'parameters'): if options.number > 0: for i in range(options.number): output.write('%10i%10i\n'%(-i-1,0)) else: for i in range(len(UserVars)): output.write('%10i%10i%s\n'%(-i-1,0,UserVars[i])) if (thisSection != 'post' or not re.match('\s*\-',line)): output.write(line) output.close()