#!/usr/bin/env python # -*- coding: UTF-8 no BOM -*- import os,sys,glob,string,subprocess,shlex from damask import Environment from damask import version as DAMASKVERSION # compiles fortran code for Python scriptID = '$Id$' damaskEnv = Environment() baseDir = damaskEnv.relPath('installation/') codeDir = damaskEnv.relPath('code/') keywords=['IMKL_ROOT','ACML_ROOT','LAPACK_ROOT','FFTW_ROOT','F90'] options={} #--- getting options from damask.conf or, if not present, from envinronment ----------------------- for option in keywords: try: value = damaskEnv.options[option] except: value = os.getenv(option) if value is None: value = '' # env not set options[option]=value #--- overwrite default options with keyword=value pair from argument list to mimic make behavior -- for i, arg in enumerate(sys.argv): for option in keywords: if arg.startswith(option): options[option] = sys.argv[i][len(option)+1:] #--- check for valid compiler and set options ----------------------------------------------------- compilers = ['ifort','gfortran'] if options['F90'] not in compilers: sys.exit('compiler "F90" (in installation/options or as Shell variable) has to be one out of: %s'%(', '.join(compilers))) compiler = { 'gfortran': '--fcompiler=gnu95 --f90flags="-fPIC -fno-range-check -xf95-cpp-input -std=f2008 -fall-intrinsics'+\ ' -fdefault-real-8 -fdefault-double-8"', 'ifort': '--fcompiler=intelem --f90flags="-fPIC -fpp -stand f08 -diag-disable 5268 -assume byterecl'+\ ' -real-size 64 -integer-size 32 -shared-intel"', }[options['F90']] #--- option not depending on compiler ------------------------------------------------------------- compileOptions = ' -DSpectral -DFLOAT=8 -DINT=4 -I%s/lib -DDAMASKVERSION=\\\\\"\\\"%s\\\\\"\\\"'%(damaskEnv.rootDir(),DAMASKVERSION) #--- this saves the path of libraries to core.so, hence it is known during runtime ---------------- if options['F90'] == 'gfortran': LDFLAGS = '-shared -Wl,-undefined,dynamic_lookup' # solved error: Undefined symbols for architecture x86_64: "_PyArg_ParseTupleAndKeywords" as found on https://lists.macosforge.org/pipermail/macports-dev/2013-May/022735.html else: LDFLAGS = ' -openmp -Wl' # some f2py versions/configurations compile with openMP, so linking against openMP is needed to prevent errors during loading of core module #--- run path of for fftw during runtime ---------------------------------------------------------- LDFLAGS += ',-rpath,%s/lib,-rpath,%s/lib64'%(options['FFTW_ROOT'],options['FFTW_ROOT']) # see http://cens.ioc.ee/pipermail/f2py-users/2003-December/000621.html if options['IMKL_ROOT']: if options['F90'] == 'gfortran': arch = 'gf' elif options['F90'] == 'ifort': arch = 'intel' lib_lapack = '-L%s/lib/intel64 -lmkl_%s_lp64 -lmkl_core -lmkl_sequential -lm'\ %(options['IMKL_ROOT'],arch) LDFLAGS +=',-rpath,%s/lib/intel64'%(options['IMKL_ROOT']) elif options['ACML_ROOT'] != '': lib_lapack = '-L%s/%s64/lib -lacml'%(options['ACML_ROOT'],options['F90']) LDFLAGS +=',-rpath,%s/%s64/lib'%(options['ACML_ROOT'],options['F90']) elif options['LAPACK_ROOT'] != '': lib_lapack = '-L%s/lib -L%s/lib64 -llapack'%(options['LAPACK_ROOT'],options['LAPACK_ROOT']) LDFLAGS +=',-rpath,%s/lib,-rpath,%s/lib64'%(options['LAPACK_ROOT'],options['LAPACK_ROOT']) #-------------------------------------------------------------------------------------------------- # f2py does not (yet) support setting of special flags for the linker, hence they must be set via # environment variable ---------------------------------------------------------------------------- my_env = os.environ my_env["LDFLAGS"] = LDFLAGS #--- delete old file ------------------------------------------------------------------------------ try: os.remove(os.path.join(damaskEnv.relPath('lib/damask'),'core.so')) except OSError, e: print ("Error when deleting: %s - %s." % (e.filename,e.strerror)) # The following command is used to compile the fortran files and make the functions defined # in damask.core.pyf available for python in the module core.so # It uses the fortran wrapper f2py that is included in the numpy package to construct the # module core.so out of the fortran code in the f90 files # For the generation of the pyf file use the following lines: ########################################################################### #'f2py -h damask.core.pyf' +\ #' --overwrite-signature --no-lower prec.f90 DAMASK_spectral_interface.f90 math.f90 mesh.f90,...' ########################################################################### os.chdir(codeDir) cmd = 'f2py damask.core.pyf' +\ ' -c --no-lower %s'%(compiler) +\ compileOptions+\ ' prec.f90'+\ ' spectral_interface.f90'+\ ' IO.f90'+\ ' libs.f90'+\ ' numerics.f90'+\ ' debug.f90'+\ ' math.f90'+\ ' FEsolving.f90'+\ ' mesh.f90'+\ ' core_quit.f90'+\ ' -L%s/lib -lfftw3'%(options['FFTW_ROOT'])+\ ' %s'%lib_lapack print('Executing: '+cmd) try: subprocess.call(shlex.split(cmd),env=my_env) except subprocess.CalledProcessError: print('build failed') except OSError: print ('f2py not found') try: os.rename(os.path.join(codeDir,'core.so'),\ os.path.join(damaskEnv.relPath('lib/damask'),'core.so')) except: pass modules = glob.glob('*.mod') for module in modules: print 'removing', module os.remove(module) #--- check if compilation of core module was successful ------------------------------------------- try: with open(damaskEnv.relPath('lib/damask/core.so')) as f: pass except IOError as e: print '*********\n* core.so not found, compilation of core modules was not successful\n*********'