#!/usr/bin/env python2.7 # -*- coding: UTF-8 no BOM -*- import os,sys,math import numpy as np from optparse import OptionParser import damask scriptName = os.path.splitext(os.path.basename(__file__))[0] scriptID = ' '.join([scriptName,damask.version]) #-------------------------------------------------------------------------------------------------- # MAIN #-------------------------------------------------------------------------------------------------- parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [file[s]]', description = """ Unpack geometry files containing ranges "a to b" and/or "n of x" multiples (exclusively in one line). """, version = scriptID) parser.add_option('-1', '--onedimensional', dest = 'oneD', action = 'store_true', help = 'output geom file with one-dimensional data arrangement') parser.set_defaults(oneD = False, ) (options, filenames) = parser.parse_args() # --- loop over input files ------------------------------------------------------------------------- if filenames == []: filenames = [None] for name in filenames: try: table = damask.ASCIItable(name = name, buffered = False, labeled = False) except: continue damask.util.report(scriptName,name) # --- interpret header ---------------------------------------------------------------------------- table.head_read() info,extra_header = table.head_getGeom() damask.util.croak(['grid a b c: %s'%(' x '.join(map(str,info['grid']))), 'size x y z: %s'%(' x '.join(map(str,info['size']))), 'origin x y z: %s'%(' : '.join(map(str,info['origin']))), 'homogenization: %i'%info['homogenization'], 'microstructures: %i'%info['microstructures'], ]) errors = [] if np.any(info['grid'] < 1): errors.append('invalid grid a b c.') if np.any(info['size'] <= 0.0): errors.append('invalid size x y z.') if errors != []: damask.util.croak(errors) table.close(dismiss = True) continue # --- write header --------------------------------------------------------------------------------- table.labels_clear() table.info_clear() table.info_append(extra_header+[ scriptID + ' ' + ' '.join(sys.argv[1:]), "grid\ta {grid[0]}\tb {grid[1]}\tc {grid[2]}".format(grid=info['grid']), "size\tx {size[0]}\ty {size[1]}\tz {size[2]}".format(size=info['size']), "origin\tx {origin[0]}\ty {origin[1]}\tz {origin[2]}".format(origin=info['origin']), "homogenization\t{homog}".format(homog=info['homogenization']), "microstructures\t{microstructures}".format(microstructures=info['microstructures']), ]) table.head_write() # --- write microstructure information ------------------------------------------------------------ microstructure = table.microstructure_read(info['grid']) # read microstructure formatwidth = int(math.floor(math.log10(microstructure.max())+1)) # efficient number printing format table.data = microstructure if options.oneD else \ microstructure.reshape((info['grid'][0],info['grid'][1]*info['grid'][2]),order='F').transpose() table.data_writeArray('%%%ii'%(formatwidth),delimiter = ' ') #--- output finalization -------------------------------------------------------------------------- table.close() # close ASCII table