#!/usr/bin/env python2.7 # -*- coding: UTF-8 no BOM -*- import os,sys import numpy as np from optparse import OptionParser import damask scriptName = os.path.splitext(os.path.basename(__file__))[0] scriptID = ' '.join([scriptName,damask.version]) #-------------------------------------------------------------------------------------------------- # MAIN #-------------------------------------------------------------------------------------------------- parser = OptionParser(option_class=damask.extendableOption, usage='%prog [geomfile(s)]', description = """ compress geometry files with ranges "a to b" and/or multiples "n of x". """, version = scriptID) (options, filenames) = parser.parse_args() # --- loop over input files ------------------------------------------------------------------------- if filenames == []: filenames = [None] for name in filenames: try: table = damask.ASCIItable(name = name, buffered = False, labeled = False) except: continue damask.util.report(scriptName,name) # --- interpret header ---------------------------------------------------------------------------- table.head_read() info,extra_header = table.head_getGeom() damask.util.croak(['grid a b c: {}'.format(' x '.join(map(str,info['grid']))), 'size x y z: {}'.format(' x '.join(map(str,info['size']))), 'origin x y z: {}'.format(' : '.join(map(str,info['origin']))), 'homogenization: {}'.format(info['homogenization']), 'microstructures: {}'.format(info['microstructures']), ]) errors = [] if np.any(info['grid'] < 1): errors.append('invalid grid a b c.') if np.any(info['size'] <= 0.0): errors.append('invalid size x y z.') if errors != []: damask.util.croak(errors) table.close(dismiss = True) continue # --- write header --------------------------------------------------------------------------------- table.labels_clear() table.info_clear() table.info_append(extra_header+[ scriptID + ' ' + ' '.join(sys.argv[1:]), "grid\ta {grid[0]}\tb {grid[1]}\tc {grid[2]}".format(grid=info['grid']), "size\tx {size[0]}\ty {size[1]}\tz {size[2]}".format(size=info['size']), "origin\tx {origin[0]}\ty {origin[1]}\tz {origin[2]}".format(origin=info['origin']), "homogenization\t{homog}".format(homog=info['homogenization']), "microstructures\t{microstructures}".format(microstructures=info['microstructures']), ]) table.head_write() # --- write packed microstructure information ----------------------------------------------------- compressType = '' former = start = -1 reps = 0 outputAlive = True while outputAlive and table.data_read(): # read next data line of ASCII table items = table.data if len(items) > 2: if items[1].lower() == 'of': items = [int(items[2])]*int(items[0]) elif items[1].lower() == 'to': items = range(int(items[0]),1+int(items[2])) else: items = map(int,items) else: items = map(int,items) for current in items: if abs(current - former) == 1 and (start - current) == reps*(former - current): compressType = 'to' reps += 1 elif current == former and start == former: compressType = 'of' reps += 1 else: if compressType == '': table.data = [] elif compressType == '.': table.data = [former] elif compressType == 'to': table.data = [start,'to',former] elif compressType == 'of': table.data = [reps,'of',former] outputAlive = table.data_write(delimiter = ' ') # output processed line compressType = '.' start = current reps = 1 former = current table.data = { '.' : [former], 'to': [start,'to',former], 'of': [reps,'of',former], }[compressType] outputAlive = table.data_write(delimiter = ' ') # output processed line # --- output finalization -------------------------------------------------------------------------- table.close() # close ASCII table