#!/usr/bin/env python2.7 # -*- coding: UTF-8 no BOM -*- import os,sys from optparse import OptionParser import damask scriptName = os.path.splitext(os.path.basename(__file__))[0] scriptID = ' '.join([scriptName,damask.version]) def determinant(m): return +m[0]*m[4]*m[8] \ +m[1]*m[5]*m[6] \ +m[2]*m[3]*m[7] \ -m[2]*m[4]*m[6] \ -m[1]*m[3]*m[8] \ -m[0]*m[5]*m[7] # -------------------------------------------------------------------- # MAIN # -------------------------------------------------------------------- parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [file[s]]', description = """ Add column(s) containing determinant of requested tensor column(s). """, version = scriptID) parser.add_option('-t','--tensor', dest = 'tensor', action = 'extend', metavar = '', help = 'heading of columns containing tensor field values') (options,filenames) = parser.parse_args() if options.tensor is None: parser.error('no data column specified.') # --- loop over input files ------------------------------------------------------------------------- if filenames == []: filenames = [None] for name in filenames: try: table = damask.ASCIItable(name = name, buffered = False) except: continue damask.util.report(scriptName,name) # ------------------------------------------ read header ------------------------------------------ table.head_read() # ------------------------------------------ sanity checks ---------------------------------------- items = { 'tensor': {'dim': 9, 'shape': [3,3], 'labels':options.tensor, 'column': []}, } errors = [] remarks = [] for type, data in items.iteritems(): for what in data['labels']: dim = table.label_dimension(what) if dim != data['dim']: remarks.append('column {} is not a {}...'.format(what,type)) else: items[type]['column'].append(table.label_index(what)) table.labels_append('det({})'.format(what)) # extend ASCII header with new labels if remarks != []: damask.util.croak(remarks) if errors != []: damask.util.croak(errors) table.close(dismiss = True) continue # ------------------------------------------ assemble header -------------------------------------- table.info_append(scriptID + '\t' + ' '.join(sys.argv[1:])) table.head_write() # ------------------------------------------ process data ------------------------------------------ outputAlive = True while outputAlive and table.data_read(): # read next data line of ASCII table for type, data in items.iteritems(): for column in data['column']: table.data_append(determinant(map(float,table.data[column: column+data['dim']]))) outputAlive = table.data_write() # output processed line # ------------------------------------------ output finalization ----------------------------------- table.close() # close input ASCII table (works for stdin)