#!/usr/bin/env python # -*- coding: UTF-8 no BOM -*- import os,sys,string,re,math,random import numpy as np from optparse import OptionParser import damask scriptID = string.replace('$Id$','\n','\\n') scriptName = scriptID.split()[1][:-3] # -------------------------------------------------------------------- # MAIN # -------------------------------------------------------------------- parser = OptionParser(option_class=damask.extendableOption, usage='%prog [options]', description = """ Distribute given number of points randomly within the three-dimensional cube [0.0,0.0,0.0]--[1.0,1.0,1.0]. Reports positions with random crystal orientations in seeds file format to STDOUT. """, version = scriptID) parser.add_option('-N', dest='N', type='int', metavar='int', \ help='number of seed points to distribute [%default]') parser.add_option('-g','--grid', dest='grid', type='int', nargs=3, metavar='int int int', \ help='min a,b,c grid of hexahedral box %default') parser.add_option('-r', '--rnd', dest='randomSeed', type='int', metavar='int', \ help='seed of random number generator [%default]') parser.set_defaults(randomSeed = None) parser.set_defaults(grid = (16,16,16)) parser.set_defaults(N = 20) (options, extras) = parser.parse_args() Npoints = reduce(lambda x, y: x * y, options.grid) if 0 in options.grid: file['croak'].write('invalid grid a b c.\n') sys.exit() if options.N > Npoints: sys.stderr.write('Warning: more seeds than grid points at minimum resolution.\n') options.N = Npoints if options.randomSeed == None: options.randomSeed = int(os.urandom(4).encode('hex'), 16) seeds = np.zeros((3,options.N),float) np.random.seed(options.randomSeed) grainEuler = np.random.rand(3,options.N) grainEuler[0,:] *= 360.0 grainEuler[1,:] = np.arccos(2*grainEuler[1,:]-1)*180.0/math.pi grainEuler[2,:] *= 360.0 seedpoint = np.random.permutation(Npoints)[:options.N] seeds[0,:]=(np.mod(seedpoint ,options.grid[0])\ +np.random.random())/options.grid[0] seeds[1,:]=(np.mod(seedpoint// options.grid[0] ,options.grid[1])\ +np.random.random())/options.grid[1] seeds[2,:]=(np.mod(seedpoint//(options.grid[1]*options.grid[0]),options.grid[2])\ +np.random.random())/options.grid[2] sys.stdout.write("5\theader\n") sys.stdout.write(scriptID + " " + " ".join(sys.argv[1:])+"\n") sys.stdout.write("grid\ta {}\tb {}\tc {}\n".format(options.grid[0],options.grid[1],options.grid[2])) sys.stdout.write("microstructures\t{}\n".format(options.N)) sys.stdout.write("randomSeed\t{}\n".format(options.randomSeed)) sys.stdout.write("x\ty\tz\tphi1\tPhi\tphi2\n") np.savetxt(sys.stdout,np.transpose(np.concatenate((seeds,grainEuler),axis = 0)),fmt='%10.6f',delimiter='\t')