#!/usr/bin/env python # -*- coding: UTF-8 no BOM -*- import os,sys,string,re,math,numpy from optparse import OptionParser, OptionGroup, Option, SUPPRESS_HELP # ----------------------------- class extendedOption(Option): # ----------------------------- # used for definition of new option parser action 'extend', which enables to take multiple option arguments # taken from online tutorial http://docs.python.org/library/optparse.html ACTIONS = Option.ACTIONS + ("extend",) STORE_ACTIONS = Option.STORE_ACTIONS + ("extend",) TYPED_ACTIONS = Option.TYPED_ACTIONS + ("extend",) ALWAYS_TYPED_ACTIONS = Option.ALWAYS_TYPED_ACTIONS + ("extend",) def take_action(self, action, dest, opt, value, values, parser): if action == "extend": lvalue = value.split(",") values.ensure_value(dest, []).extend(lvalue) else: Option.take_action(self, action, dest, opt, value, values, parser) # ----------------------- MAIN ------------------------------- identifiers = { 'resolution': ['a','b','c'], 'dimension': ['x','y','z'], } mappings = { 'resolution': lambda x: int(x), 'dimension': lambda x: float(x), } parser = OptionParser(option_class=extendedOption, usage='%prog options [file[s]]', description = """ Multiplies a spectral geometry description independently in x, y, and z direction at fixed dimension. """ + string.replace('$Id$','\n','\\n') ) parser.add_option('-f', '--factor', dest='factor', type='int', nargs = 3, \ help='multiplication factors of a,b,c resolution') parser.add_option('-2', '--twodimensional', dest='twoD', action='store_true', \ help='output geom file with two-dimensional data arrangement') parser.add_option('-k', '--keep', dest='keepDimension', action='store_true', \ help='keep dimension as before') parser.set_defaults(factor = [1,1,1]) parser.set_defaults(twoD = False) parser.set_defaults(keepDimension = False) (options, filenames) = parser.parse_args() prefix = 'mult%ix%ix%i'%(options.factor[0],options.factor[1],options.factor[2]) # ------------------------------------------ setup file handles --------------------------------------- files = [] if filenames == []: files.append({'name':'STDIN', 'input':sys.stdin, 'output':sys.stdout}) else: for name in filenames: if os.path.exists(name): files.append({'name':name, 'input':open(name), 'output':open(prefix+'_'+name,'w')}) # ------------------------------------------ loop over input files --------------------------------------- for file in files: if file['name'] != 'STDIN': print file['name'] # get labels by either read the first row, or - if keyword header is present - the last line of the header firstline = file['input'].readline() m = re.search('(\d+)\s*head', firstline.lower()) if m: headerlines = int(m.group(1)) headers = [firstline]+[file['input'].readline() for i in range(headerlines)] else: headerlines = 1 headers = firstline content = file['input'].readlines() file['input'].close() resolution = [0,0,0] dimension = [0.0,0.0,0.0] resolution_blown = [0,0,0] dimension_blown = [0.0,0.0,0.0] new_header = [] for header in headers: headitems = header.split() if headitems[0] == 'resolution': # located resolution entry for i in xrange(3): resolution[i] = mappings['resolution'](headitems[headitems.index(identifiers['resolution'][i])+1]) resolution_blown[i] = resolution[i]*options.factor[i] header = "resolution\ta %i\tb %i\tc %i\n"%(resolution_blown[0],resolution_blown[1],resolution_blown[2]) if headitems[0] == 'dimension': # located dimension entry for i in xrange(3): dimension[i] = mappings['dimension'](headitems[headitems.index(identifiers['dimension'][i])+1]) if options.keepDimension: dimension_blown[i] = dimension[i] else: dimension_blown[i] = dimension[i]*options.factor[i] header = "dimension\tx %f\ty %f\tz %f\n"%(dimension_blown[0],dimension_blown[1],dimension_blown[2]) new_header.append(header) if resolution == [0,0,0]: print 'no resolution info found.' continue if dimension == [0.0,0.0,0.0]: print 'no dimension info found.' continue if file['name'] != 'STDIN': print 'resolution: %s'%(' x '.join(map(str,resolution_blown))) print 'dimension: %s'%(' x '.join(map(str,dimension_blown))) microstructure = numpy.zeros(resolution,'i') i = 0 for line in content: for item in map(int,line.split()): microstructure[i%resolution[0],(i/resolution[0])%resolution[1],i/resolution[0]/resolution[1]] = item i += 1 formatwidth = int(math.floor(math.log10(microstructure.max()))) # ------------------------------------------ assemble header --------------------------------------- output = ''.join(new_header) # ------------------------------------- regenerate texture information ---------------------------------- for z in xrange(resolution[2]): for c in xrange(options.factor[2]): for y in xrange(resolution[1]): for b in xrange(options.factor[1]): for x in xrange(resolution[0]): for a in xrange(options.factor[0]): output += ('%%%ii'%formatwidth)%microstructure[x,y,z] + {True:' ',False:'\n'}[options.twoD] output += {True:'\n',False:''}[options.twoD] # ------------------------------------------ output result --------------------------------------- file['output'].write(output) file['input'].close() if file['name'] != 'STDIN': file['output'].close()