#!/usr/bin/env python3 # -*- coding: UTF-8 no BOM -*- import os,sys,math import numpy as np import damask from optparse import OptionParser scriptName = os.path.splitext(os.path.basename(__file__))[0] scriptID = ' '.join([scriptName,damask.version]) #-------------------------------------------------------------------------------------------------- # MAIN #-------------------------------------------------------------------------------------------------- validDirections = ['x','y','z'] parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [geomfile(s)]', description = """ Mirrors spectral geometry description along given directions. """, version=scriptID) parser.add_option('-d','--direction', dest = 'directions', action = 'extend', metavar = '', help = "directions in which to mirror {'x','y','z'}") parser.add_option('--float', dest = 'float', action = 'store_true', help = 'use float input') parser.set_defaults(float = False, ) (options, filenames) = parser.parse_args() if options.directions is None: parser.error('no direction given.') if not set(options.directions).issubset(validDirections): invalidDirections = [str(e) for e in set(options.directions).difference(validDirections)] parser.error('invalid directions {}. '.format(*invalidDirections)) datatype = 'f' if options.float else 'i' # --- loop over input files ------------------------------------------------------------------------- if filenames == []: filenames = [None] for name in filenames: try: table = damask.ASCIItable(name = name, buffered = False, labeled = False) except: continue damask.util.report(scriptName,name) # --- interpret header ---------------------------------------------------------------------------- table.head_read() info,extra_header = table.head_getGeom() damask.util.report_geom(info) errors = [] if np.any(info['grid'] < 1): errors.append('invalid grid a b c.') if np.any(info['size'] <= 0.0): errors.append('invalid size x y z.') if errors != []: damask.util.croak(errors) table.close(dismiss = True) continue # --- read data ------------------------------------------------------------------------------------ microstructure = table.microstructure_read(info['grid'],datatype).reshape(info['grid'],order='F') # read microstructure if 'z' in options.directions: microstructure = np.concatenate([microstructure,microstructure[:,:,::-1]],2) if 'y' in options.directions: microstructure = np.concatenate([microstructure,microstructure[:,::-1,:]],1) if 'x' in options.directions: microstructure = np.concatenate([microstructure,microstructure[::-1,:,:]],0) # --- do work ------------------------------------------------------------------------------------ newInfo = { 'size': microstructure.shape*info['size']/info['grid'], 'grid': microstructure.shape, } # --- report --------------------------------------------------------------------------------------- remarks = [] if (any(newInfo['grid'] != info['grid'])): remarks.append('--> grid a b c: %s'%(' x '.join(map(str,newInfo['grid'])))) if (any(newInfo['size'] != info['size'])): remarks.append('--> size x y z: %s'%(' x '.join(map(str,newInfo['size'])))) if remarks != []: damask.util.croak(remarks) # --- write header --------------------------------------------------------------------------------- table.labels_clear() table.info_clear() table.info_append(extra_header+[ scriptID + ' ' + ' '.join(sys.argv[1:]), "grid\ta {grid[0]}\tb {grid[1]}\tc {grid[2]}".format(grid=newInfo['grid']), "size\tx {size[0]}\ty {size[1]}\tz {size[2]}".format(size=newInfo['size']), "origin\tx {origin[0]}\ty {origin[1]}\tz {origin[2]}".format(origin=info['origin']), "homogenization\t{homog}".format(homog=info['homogenization']), "microstructures\t{microstructures}".format(microstructures=info['microstructures']), ]) table.head_write() # --- write microstructure information ------------------------------------------------------------ formatwidth = int(math.floor(math.log10(np.nanmax(microstructure))+1)) table.data = microstructure.reshape((newInfo['grid'][0],np.prod(newInfo['grid'][1:])),order='F').transpose() table.data_writeArray('%{}i'.format(formatwidth),delimiter = ' ') # --- output finalization -------------------------------------------------------------------------- table.close() # close ASCII table