#!/usr/bin/env python3 import os import sys from optparse import OptionParser import numpy as np import damask scriptName = os.path.splitext(os.path.basename(__file__))[0] scriptID = ' '.join([scriptName,damask.version]) # -------------------------------------------------------------------- # MAIN # -------------------------------------------------------------------- parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [ASCIItable(s)]', description = """ Add coordinates of stereographic projection of given direction (pole) in crystal frame. """, version = scriptID) parser.add_option('-p', '--pole', dest = 'pole', type = 'float', nargs = 3, metavar = 'float float float', help = 'crystal frame direction for pole figure [%default]') parser.add_option('--polar', dest = 'polar', action = 'store_true', help = 'output polar coordinates (r,φ) instead of Cartesian coordinates (x,y)') parser.add_option('-o', '--orientation', dest = 'quaternion', metavar = 'string', help = 'label of crystal orientation given as unit quaternion [%default]') parser.set_defaults(pole = (1.0,0.0,0.0), quaternion = 'orientation', ) (options, filenames) = parser.parse_args() pole = np.array(options.pole) pole /= np.linalg.norm(pole) # --- loop over input files ------------------------------------------------------------------------- if filenames == []: filenames = [None] for name in filenames: try: table = damask.ASCIItable(name = name, buffered = False) except: continue damask.util.report(scriptName,name) # ------------------------------------------ read header ------------------------------------------ table.head_read() # ------------------------------------------ sanity checks ---------------------------------------- if not table.label_dimension(options.quaternion) == 4: damask.util.croak('input {} does not have dimension 4.'.format(options.quaternion)) table.close(dismiss = True) # close ASCIItable and remove empty file continue column = table.label_index(options.quaternion) # ------------------------------------------ assemble header --------------------------------------- table.info_append(scriptID + '\t' + ' '.join(sys.argv[1:])) table.labels_append(['{}_pole_{}{}{}'.format(i+1,*options.pole) for i in range(2)]) table.head_write() # ------------------------------------------ process data ------------------------------------------ outputAlive = True while outputAlive and table.data_read(): # read next data line of ASCII table o = damask.Rotation(np.array(list(map(float,table.data[column:column+4])))) rotatedPole = o*pole # rotate pole according to crystal orientation (x,y) = rotatedPole[0:2]/(1.+abs(pole[2])) # stereographic projection table.data_append([np.sqrt(x*x+y*y),np.arctan2(y,x)] if options.polar else [x,y]) # cartesian coordinates outputAlive = table.data_write() # output processed line # ------------------------------------------ output finalization ----------------------------------- table.close() # close ASCII tables