#!/usr/bin/env python3 import os import sys from io import StringIO from optparse import OptionParser import numpy as np import damask scriptName = os.path.splitext(os.path.basename(__file__))[0] scriptID = ' '.join([scriptName,damask.version]) # -------------------------------------------------------------------- # MAIN # -------------------------------------------------------------------- parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [ASCIItable(s)]', description = """ Transform X,Y,Z,F APS BeamLine 34 coordinates to x,y,z APS strain coordinates. """, version = scriptID) parser.add_option('-f','--frame',dest='frame', metavar='string', help='label of APS X,Y,Z coords') parser.add_option('--depth', dest='depth', metavar='string', help='depth') (options,filenames) = parser.parse_args() if filenames == []: filenames = [None] if options.frame is None: parser.error('frame not specified') if options.depth is None: parser.error('depth not specified') theta=-0.75*np.pi RotMat2TSL=np.array([[1., 0., 0.], [0., np.cos(theta), np.sin(theta)], # Orientation to account for -135 deg [0., -np.sin(theta), np.cos(theta)]]) # rotation for TSL convention for name in filenames: damask.util.report(scriptName,name) table = damask.Table.from_ASCII(StringIO(''.join(sys.stdin.read())) if name is None else name) coord = - table.get(options.frame) coord[:,2] += table.get(options.depth)[:,0] table.add('coord', np.einsum('ijk,ik->ij',np.broadcast_to(RotMat2TSL,(coord.shape[0],3,3)),coord), scriptID+' '+' '.join(sys.argv[1:])) table.to_ASCII(sys.stdout if name is None else name)