Commit Graph

5738 Commits

Author SHA1 Message Date
chen 8cdc7c0b10 add xdmf wrapper generator for HDF5
Not recommended for large dataset due to potential memory leak currently plaguing Xdmf ilbrary.
2016-10-13 13:41:04 -04:00
chen ec59dfeec0 do not reshape data
since xdmf is not stable right now, there is no need to reshape the data to tie it to the mesh. comment them out for future reference
2016-10-13 13:22:37 -04:00
chen ace06fd0e1 skip dulplicated columns in ascii table
also add a todo list at the top
2016-10-13 11:33:38 -04:00
chen b41e40becf Merged branch development into development 2016-10-13 10:22:31 -04:00
Martin Diehl b80184e745 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2016-10-13 10:57:31 +02:00
chen c311ac47ca force using rectangular mesh
Paraview cannot handle large number of polyvertices using xdmf, forcing a meshed structure to by pass the problem.
2016-10-12 20:20:15 -04:00
Chen 7310c53f73 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2016-10-12 09:27:02 -04:00
Test User 1b3d798746 updated version information after successful test of v2.0.1-201-g7278605 2016-10-11 04:35:23 +02:00
chen ffcfe67c73 remove debug output, fix name handling error 2016-10-10 09:46:11 -04:00
Martin Diehl 9b27c5749b should be executable 2016-10-10 09:23:58 +02:00
chen 7278605004 fix naming error 2016-10-09 19:13:44 -04:00
chen 6450cb3003 fix syntax error 2016-10-09 19:12:45 -04:00
chen 280f8f7c2b correct docstring according to PEP requirement 2016-10-09 19:09:45 -04:00
chen 4dece54019 minor syntax error 2016-10-09 19:07:41 -04:00
chen cc5e0721e0 coding style fix 2016-10-09 19:06:24 -04:00
chen e9c1068c99 mimic other sub modules in DAMASK for H5Table 2016-10-09 19:03:28 -04:00
chen 6eb111dc7c add script convert ASCII table to HDF5
using H5Table
2016-10-09 19:01:38 -04:00
chen 912aa6989c H5Table support customize data storage layout 2016-10-09 18:59:50 -04:00
chen 753bdfd5a9 adding more definition 2016-10-09 18:59:06 -04:00
chen 52813351be add comments at class level 2016-10-09 17:19:49 -04:00
chen f992edd3e9 add import at package level 2016-10-09 17:19:30 -04:00
chen 0c2c450659 adding more comments
explaining the reason for this interface class and its simplified API design
2016-10-09 17:13:40 -04:00
chen fad9938a8b add cmd history as root attributes 2016-10-09 17:06:56 -04:00
chen 012b702f7a finish h5table class 2016-10-07 17:43:52 -04:00
chen 859e3584ca add log for demo 2016-10-07 17:43:27 -04:00
chen 83dae7f9a8 add data manipulator 2016-10-07 16:41:17 -04:00
chen 491b4e31ec add function to extract path based on label 2016-10-07 15:33:43 -04:00
chen 4e8bd83d4b syntax error fix 2016-10-07 15:32:10 -04:00
chen 753d71965e data structure file for HDF5 2016-10-07 15:31:29 -04:00
chen 1d02010cfe Merged branch development into development 2016-10-07 10:46:14 -04:00
chen e148ecc3e3 quick hack to locate the HDF5 data structure def file 2016-10-07 10:46:07 -04:00
chen 2cbec97eab update xml definition of data structure in HDF5 2016-10-07 10:45:31 -04:00
Test User 1a47d81fad updated version information after successful test of v2.0.1-176-gde793b5 2016-10-07 16:38:58 +02:00
chen 7262ed9a17 use xml file showing the data structure in HDF5 2016-10-07 10:00:03 -04:00
chen aae2bcf6f9 add new interface class to HDF5 2016-10-07 09:47:15 -04:00
Martin Diehl de793b5827 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into miscImprovements 2016-10-07 11:47:49 +02:00
Test User 25b0ebb19d updated version information after successful test of v2.0.1-173-gfb8a464 2016-10-06 16:40:49 +02:00
Martin Diehl 5951b45259 only grain file type 1 seems to make sense (type 2 has average values).
For type one, data is fixed i.e. flexible labels are not useful
2016-10-06 15:22:05 +02:00
Martin Diehl fb8a464674 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into miscImprovements 2016-10-06 12:23:08 +02:00
Martin Diehl de88bebe99 handling defaults correctly for extend option 2016-10-06 12:14:07 +02:00
Test User d7e5c97c56 updated version information after successful test of v2.0.1-170-gf78f89f 2016-10-06 04:40:33 +02:00
Martin Diehl f78f89fb12 periodic microstructure needs to be updated per iteration (N).
now calling script twice gives the same result as one call with N=2.
results for N=1 are not affected
2016-10-05 15:24:37 +02:00
Test User 546d83cdc3 updated version information after successful test of v2.0.1-168-ge49d1d4 2016-09-29 04:40:32 +02:00
Philip Eisenlohr e49d1d4792 slight readability improvement 2016-09-28 18:27:52 -04:00
Philip Eisenlohr ef785cd7b5 removed PETSC_ARCH output 2016-09-28 18:27:06 -04:00
Test User 858d3c8b03 updated version information after successful test of v2.0.1-165-g03b023a 2016-09-28 04:41:18 +02:00
Philip Eisenlohr 03b023a0d1 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2016-09-27 14:24:24 -04:00
Martin Diehl 3abf0bc2d3 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into miscImprovements 2016-09-27 06:22:52 +02:00
Aritra Chakraborty 0ffd74d536 correct flag "data" for updated vtk_addRectilinearGridData 2016-09-26 16:32:39 -04:00
Aritra Chakraborty 1d06e82700 grain circumference identification
fixed right most path selection criteria for grain circumference
2016-09-26 16:30:50 -04:00