Martin Diehl
6f0308844f
geom packing/unpacking won't throw away unknown header information any more (might contain comments)
2013-04-12 10:47:44 +00:00
Martin Diehl
0b1033d63a
switched to new keywords "grid" and "size", still reads the old "resolution" and "dimension" but writes the new ones
2013-04-12 10:27:05 +00:00
Martin Diehl
010d4c6e26
added script to make 27 periodic copies (3 in each dimension)
2013-03-11 13:40:30 +00:00
Martin Diehl
8a66693001
added script to convert data used by R.A. Lebensohn to spectral solver (geom, material.config) format
2013-03-05 16:31:17 +00:00
Philip Eisenlohr
0d7f1e8623
killed "margin" option, now same as all others: resolution and dimension in x and y.
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can be non-square grid.
2013-02-27 18:43:53 +00:00
Philip Eisenlohr
565c532546
fixed bugs (grain index start, alpha orientation for elliptic osteons).
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added option to rotate osteon relative to periodic box.
2013-02-27 10:56:30 +00:00
Pratheek Shanthraj
1cc990c7ac
osteon geom and config generator
2013-02-25 17:12:13 +00:00
Martin Diehl
831ad6d9c8
added leading zeros to names of microstructures and phases, spaces caused problems during initialization
2013-02-20 14:50:01 +00:00
Christoph Kords
a90f15a3d3
corrected usage of "append" (which does not copy list items but only creates references)
2013-02-13 16:00:02 +00:00
Martin Diehl
e74b5da19a
changed all remaining routines to fortran-fast arrays (geometry reconstruction etc.)
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changed all remaining routines in f2py to more clever determination of array size (requires f2py >= 2.0)
enabled 3D visualize to work with odd resolution by switching to linear reconstruction
PLEASE NOTE: Redefinition of routines for f2py might cause trouble -> DELETE DAMASK_ROOT/lib/damask/core.so in this case
further changes: added pure statement where possible, polished, unified use of "Q" for "Quaternion" and reordered math to have similar routines together
2013-01-31 16:28:08 +00:00
Philip Eisenlohr
c8aaf8f6d4
added $id flags and specified line ending types when missing.
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setup script missed ".py" extension for geom_euclideanDistance.
2013-01-18 12:59:26 +00:00
Pratheek Shanthraj
0e93d51fed
adopted same algorithm as in addEuclideanDistance
2013-01-18 11:42:27 +00:00
Pratheek Shanthraj
096204cd79
corrected missing file renaming of output
2013-01-18 11:39:53 +00:00
Pratheek Shanthraj
f63bb747c1
script to calculate the euclidean distance map (shortest distance to a grain boundary) of a given geom description using fast marching method (O(N logN) ops). grain boundary extracted using FD stencil.
2012-11-29 21:53:57 +00:00
Philip Eisenlohr
05507a6240
removed opening of unused _tmp file
2012-11-27 17:59:56 +00:00
Martin Diehl
b5945ced5e
changed counting of rows from pythonic (starting at 0) to human way (starting at 1)
2012-11-20 10:27:09 +00:00
Philip Eisenlohr
1df9be233d
changed default threshold to 0.0
2012-11-08 17:08:41 +00:00
Philip Eisenlohr
025d6c9048
renamed script to new convention
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aligned output behavior to that of fromVoronoiTessellation, i.e., standard output is geom, --config gives associated material.config stud
2012-11-08 15:44:51 +00:00
Philip Eisenlohr
af2aa8500d
added option to specify crystallite index
2012-11-08 15:43:38 +00:00
Philip Eisenlohr
c4c27860b2
renamed script
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updated to recent standard in io processing
introduced "primitive" bicontinuous structure in addition to "diamond" and "gyroid"
2012-11-07 16:52:10 +00:00
Philip Eisenlohr
7cf2024be3
fixed buggy parameter checking
2012-11-07 16:51:17 +00:00
Philip Eisenlohr
e11d107956
fixed reporting to STDOUT/STDERR
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fixed buggy parameter checking
2012-11-07 16:49:47 +00:00
Philip Eisenlohr
cfc8823328
missed those three in former commit...
2012-11-05 21:28:01 +00:00
Philip Eisenlohr
1bd4262cfb
renaming of (loosely related) "spectral" scripts to (more tightly related) "geom" versions.
2012-11-05 21:19:12 +00:00
Philip Eisenlohr
afaf1f4e8c
made errors report to STDERR.
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maxMicrostructure remains silent if not present.
2012-10-30 16:32:00 +00:00
Philip Eisenlohr
f2229883b5
exchanged "maxGrainCount" for "maxMicrostructure", since this is what it really means...
2012-10-30 16:15:10 +00:00
Philip Eisenlohr
ff164c9209
changed packing syntax from "N copies of x" to "N of x" (now consistent with IO.f90)
2012-10-30 15:53:46 +00:00
Philip Eisenlohr
2d36d52cf7
changed packing syntax from "N copies of x" to "N of x" (now consistent with geomPack and IO.f90)
2012-10-30 15:47:11 +00:00
Philip Eisenlohr
17bfc3b284
added explanation of script purpose to its usage output (-h)
2012-10-18 07:24:44 +00:00
Martin Diehl
124451ac1a
added missing comment sign #
2012-10-04 08:42:13 +00:00
Martin Diehl
0a961bef55
made test for spectral packing/unpacking working again, small fixes in the 2 scripts
2012-09-28 14:49:07 +00:00
Philip Eisenlohr
5dbbb56460
fixed bug in 2D output format alignment.
2012-09-13 12:28:21 +00:00
Martin Diehl
77b2eef269
corrected wrong compiler option for gfortran in setup and updated naming scheme
2012-09-13 12:20:00 +00:00
Philip Eisenlohr
b76fee325b
script to shift (physical) origin of geometry file and/or shift microstructure indices by fixed amount and substitute individual indices by other ones.
2012-09-13 10:12:00 +00:00
Philip Eisenlohr
66e38606f0
syntax errors in one file terminated the script. now continues with next input...
2012-09-13 10:09:54 +00:00
Philip Eisenlohr
1c0649e17a
syntax errors in one file terminated the script. now continues with next input...
2012-09-13 10:08:57 +00:00
Philip Eisenlohr
8078585ce8
removed two left-over debug statements
2012-09-13 08:46:18 +00:00
Philip Eisenlohr
3d14c5b234
functionality now subsumed into geomCanvas
2012-09-13 07:58:29 +00:00
Philip Eisenlohr
4263191423
functionality now subsumed into geomCanvas
2012-09-13 07:57:57 +00:00
Philip Eisenlohr
1fe202fd90
added $ID and line endings.
2012-09-13 07:56:45 +00:00
Philip Eisenlohr
4f6e0eda32
splitter geom-file un/packing into two separate scripts.
2012-09-05 15:15:11 +00:00
Martin Diehl
a94b089aaa
removed old fortran brute force based tessellation
2012-07-26 09:07:24 +00:00
Philip Eisenlohr
783e1b50e2
condensed info parsing.
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added info to report new origin of grid (based on --offset).
2012-06-26 18:08:50 +00:00
Philip Eisenlohr
fd3d592333
added capability to respect "origin" information in header
2012-06-26 18:07:38 +00:00
Philip Eisenlohr
cd04f990c5
added $id$ property and LF ending
2012-06-26 17:20:16 +00:00
Philip Eisenlohr
9041c5de39
fixed help texts
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killed full number range output option (use spectral_geomPack if needed)
2012-06-26 14:41:25 +00:00
Martin Diehl
2b5ff6a456
2 small corrections for header of geom file
2012-06-26 10:41:22 +00:00
Pratheek Shanthraj
77ee33ec1f
script to changes the (three-dimensional) canvas of a spectral geometry description
2012-06-21 12:57:14 +00:00
Philip Eisenlohr
01a9290567
deleted old incarnation...
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new script follows established option parsing.
can rescale (increase only) the number of grid points in any dimension (with or without concurrent dimension scaling).
2012-06-20 16:00:48 +00:00
Philip Eisenlohr
1105824562
new option to not rescale patch (set size = 0)
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added "3 header" to file output
will now extrude for spectral grids
2012-06-20 15:58:43 +00:00