Commit Graph

122 Commits

Author SHA1 Message Date
Philip Eisenlohr 0d7f1e8623 killed "margin" option, now same as all others: resolution and dimension in x and y.
can be non-square grid.
2013-02-27 18:43:53 +00:00
Philip Eisenlohr 565c532546 fixed bugs (grain index start, alpha orientation for elliptic osteons).
added option to rotate osteon relative to periodic box.
2013-02-27 10:56:30 +00:00
Pratheek Shanthraj 1cc990c7ac osteon geom and config generator 2013-02-25 17:12:13 +00:00
Martin Diehl 831ad6d9c8 added leading zeros to names of microstructures and phases, spaces caused problems during initialization 2013-02-20 14:50:01 +00:00
Christoph Kords a90f15a3d3 corrected usage of "append" (which does not copy list items but only creates references) 2013-02-13 16:00:02 +00:00
Martin Diehl e74b5da19a changed all remaining routines to fortran-fast arrays (geometry reconstruction etc.)
changed all remaining routines in f2py to more clever determination of array size (requires f2py >= 2.0)
enabled 3D visualize to work with odd resolution by switching to linear reconstruction
PLEASE NOTE: Redefinition of routines for f2py might cause trouble -> DELETE DAMASK_ROOT/lib/damask/core.so in this case
further changes: added pure statement where possible, polished, unified use of "Q" for "Quaternion" and reordered math to have similar routines together
2013-01-31 16:28:08 +00:00
Philip Eisenlohr c8aaf8f6d4 added $id flags and specified line ending types when missing.
setup script missed ".py" extension for geom_euclideanDistance.
2013-01-18 12:59:26 +00:00
Pratheek Shanthraj 0e93d51fed adopted same algorithm as in addEuclideanDistance 2013-01-18 11:42:27 +00:00
Pratheek Shanthraj 096204cd79 corrected missing file renaming of output 2013-01-18 11:39:53 +00:00
Pratheek Shanthraj f63bb747c1 script to calculate the euclidean distance map (shortest distance to a grain boundary) of a given geom description using fast marching method (O(N logN) ops). grain boundary extracted using FD stencil. 2012-11-29 21:53:57 +00:00
Philip Eisenlohr 05507a6240 removed opening of unused _tmp file 2012-11-27 17:59:56 +00:00
Martin Diehl b5945ced5e changed counting of rows from pythonic (starting at 0) to human way (starting at 1) 2012-11-20 10:27:09 +00:00
Philip Eisenlohr 1df9be233d changed default threshold to 0.0 2012-11-08 17:08:41 +00:00
Philip Eisenlohr 025d6c9048 renamed script to new convention
aligned output behavior to that of fromVoronoiTessellation, i.e., standard output is geom, --config gives associated material.config stud
2012-11-08 15:44:51 +00:00
Philip Eisenlohr af2aa8500d added option to specify crystallite index 2012-11-08 15:43:38 +00:00
Philip Eisenlohr c4c27860b2 renamed script
updated to recent standard in io processing
introduced "primitive" bicontinuous structure in addition to "diamond" and "gyroid"
2012-11-07 16:52:10 +00:00
Philip Eisenlohr 7cf2024be3 fixed buggy parameter checking 2012-11-07 16:51:17 +00:00
Philip Eisenlohr e11d107956 fixed reporting to STDOUT/STDERR
fixed buggy parameter checking
2012-11-07 16:49:47 +00:00
Philip Eisenlohr cfc8823328 missed those three in former commit... 2012-11-05 21:28:01 +00:00
Philip Eisenlohr 1bd4262cfb renaming of (loosely related) "spectral" scripts to (more tightly related) "geom" versions. 2012-11-05 21:19:12 +00:00
Philip Eisenlohr afaf1f4e8c made errors report to STDERR.
maxMicrostructure remains silent if not present.
2012-10-30 16:32:00 +00:00
Philip Eisenlohr f2229883b5 exchanged "maxGrainCount" for "maxMicrostructure", since this is what it really means... 2012-10-30 16:15:10 +00:00
Philip Eisenlohr ff164c9209 changed packing syntax from "N copies of x" to "N of x" (now consistent with IO.f90) 2012-10-30 15:53:46 +00:00
Philip Eisenlohr 2d36d52cf7 changed packing syntax from "N copies of x" to "N of x" (now consistent with geomPack and IO.f90) 2012-10-30 15:47:11 +00:00
Philip Eisenlohr 17bfc3b284 added explanation of script purpose to its usage output (-h) 2012-10-18 07:24:44 +00:00
Martin Diehl 124451ac1a added missing comment sign # 2012-10-04 08:42:13 +00:00
Martin Diehl 0a961bef55 made test for spectral packing/unpacking working again, small fixes in the 2 scripts 2012-09-28 14:49:07 +00:00
Philip Eisenlohr 5dbbb56460 fixed bug in 2D output format alignment. 2012-09-13 12:28:21 +00:00
Martin Diehl 77b2eef269 corrected wrong compiler option for gfortran in setup and updated naming scheme 2012-09-13 12:20:00 +00:00
Philip Eisenlohr b76fee325b script to shift (physical) origin of geometry file and/or shift microstructure indices by fixed amount and substitute individual indices by other ones. 2012-09-13 10:12:00 +00:00
Philip Eisenlohr 66e38606f0 syntax errors in one file terminated the script. now continues with next input... 2012-09-13 10:09:54 +00:00
Philip Eisenlohr 1c0649e17a syntax errors in one file terminated the script. now continues with next input... 2012-09-13 10:08:57 +00:00
Philip Eisenlohr 8078585ce8 removed two left-over debug statements 2012-09-13 08:46:18 +00:00
Philip Eisenlohr 3d14c5b234 functionality now subsumed into geomCanvas 2012-09-13 07:58:29 +00:00
Philip Eisenlohr 4263191423 functionality now subsumed into geomCanvas 2012-09-13 07:57:57 +00:00
Philip Eisenlohr 1fe202fd90 added $ID and line endings. 2012-09-13 07:56:45 +00:00
Philip Eisenlohr 4f6e0eda32 splitter geom-file un/packing into two separate scripts. 2012-09-05 15:15:11 +00:00
Martin Diehl a94b089aaa removed old fortran brute force based tessellation 2012-07-26 09:07:24 +00:00
Philip Eisenlohr 783e1b50e2 condensed info parsing.
added info to report new origin of grid (based on --offset).
2012-06-26 18:08:50 +00:00
Philip Eisenlohr fd3d592333 added capability to respect "origin" information in header 2012-06-26 18:07:38 +00:00
Philip Eisenlohr cd04f990c5 added $id$ property and LF ending 2012-06-26 17:20:16 +00:00
Philip Eisenlohr 9041c5de39 fixed help texts
killed full number range output option (use spectral_geomPack if needed)
2012-06-26 14:41:25 +00:00
Martin Diehl 2b5ff6a456 2 small corrections for header of geom file 2012-06-26 10:41:22 +00:00
Pratheek Shanthraj 77ee33ec1f script to changes the (three-dimensional) canvas of a spectral geometry description 2012-06-21 12:57:14 +00:00
Philip Eisenlohr 01a9290567 deleted old incarnation...
new script follows established option parsing.
can rescale (increase only) the number of grid points in any dimension (with or without concurrent dimension scaling).
2012-06-20 16:00:48 +00:00
Philip Eisenlohr 1105824562 new option to not rescale patch (set size = 0)
added "3 header" to file output

will now extrude for spectral grids
2012-06-20 15:58:43 +00:00
Philip Eisenlohr dfc8606207 boundary conditions now consider patch dimension along pulling direction (used to be orthogonal to that..!) 2012-06-13 09:28:59 +00:00
Taymor El Achkar 1c427e8642 loop corrected 2012-05-14 07:58:21 +00:00
Taymor El Achkar 542768d712 bug fixed 2012-05-11 08:36:42 +00:00
Taymor El Achkar c962452cda python version of voronoi_tessellation.f90 generating geom file and material_config file (using kd_tree nearest neighbor search) 2012-05-10 16:42:07 +00:00