Philip Eisenlohr
8cd1f027b3
bug fixing.
2016-03-21 08:51:56 -04:00
Philip Eisenlohr
a41cd3df40
added "strict" option to reading microstructure from geom file. will now complain if data mismatches with grid.
2016-03-20 16:46:35 -04:00
Zhuowen Zhao
d42f8d5fd4
added possibility to read real numbers as microstructure indices (not only integers)
2016-03-17 17:42:05 -04:00
Martin Diehl
a4bbdd5ecb
further commenting, removing not used variables and code (marc2vtk)
2016-03-04 19:06:36 +01:00
Martin Diehl
120b2b8bd2
added test for hybridIA
2015-12-22 22:17:15 +00:00
Martin Diehl
0cfe35dfe6
consistently removing leading and trailing whitespace
2015-12-22 15:59:01 +00:00
Martin Diehl
161e637ba6
not needed any more (at more usefull position in damask.util)
2015-11-30 16:30:35 +00:00
Philip Eisenlohr
2b5cb08c4d
new method “head_putGeom” translates info-array into geom-description
2015-11-14 01:48:16 +00:00
Philip Eisenlohr
519484233c
can now deal with “empty” header line.
...
example:
# some comment
# further stuff
1_dim 2_dim
34 33
1 22
would work with “labeled”=True and stores the first two lines as “info”.
2015-11-03 21:14:45 +00:00
Martin Diehl
e72ae63873
geom canvas crashed for some parameters, now giving error message. table class now handles dismiss correctly
2015-10-14 21:35:56 +00:00
Philip Eisenlohr
26f8f74310
undone np.unique of columns since this would introduce the unwanted side-effect of (messily) sorting columns. user expects to get sorting as provided through command line.
2015-10-09 12:55:30 +00:00
Martin Diehl
851d2e1b2c
prevent to load columns more than once\n @Philip: OK?
2015-10-08 17:47:00 +00:00
Philip Eisenlohr
801d57af4c
fixed buggy behavior caused by assigning string instead of single-item list to readBuffer.
2015-10-07 01:03:26 +00:00
Martin Diehl
95a8b54996
buggy behavior when read buffer contained string (len > 0, but no pop() method)
...
@Philip: please check if intended behavior
2015-10-06 16:19:37 +00:00
Philip Eisenlohr
e089e60202
transparently deal with one-dimensional array output
2015-09-30 18:44:54 +00:00
Philip Eisenlohr
b2243ae3c1
small polishing
2015-09-29 22:25:57 +00:00
Martin Diehl
6a3a0f3859
allow asciitable to use file handle instead of string (following e.g. numpy.genfromtxt)
2015-09-16 19:44:11 +00:00
Martin Diehl
5f9fae1b75
simplified reporting using "emph"
2015-09-11 12:55:43 +00:00
Tias Maiti
7495b33b68
label_dimension dropped indices >9 due to buggy string comparison…
2015-09-08 23:12:45 +00:00
Philip Eisenlohr
858fe7e897
prevent closing sys.stdin or sys.stdout
2015-08-24 00:40:52 +00:00
Philip Eisenlohr
7ceb7f7614
fixed problem when reading single label through data_readArray
2015-08-23 23:18:34 +00:00
Philip Eisenlohr
6ba76c3832
introduced public line object holding currently read data line as string.
...
label_append now has option to overwrite (reset=True) labels that were read originally.
data_writeArray maintains full significant digit representation as default.
2015-08-20 19:38:06 +00:00
Philip Eisenlohr
93dd9f5c09
bug fix regarding self.tmpext.
...
added check for access rights when overwriting original file.
2015-08-12 18:41:44 +00:00
Philip Eisenlohr
64515d7aca
simplified interface:
...
name == None: read from stdin
outname == None and not readonly mode: do in-place substitution of name (with transparent file renaming upon table.close)
2015-08-12 17:42:38 +00:00
Philip Eisenlohr
d4e748b654
outsourced multiple repetitive functions into ASCIItable class.
...
changed ASCIItable API from file-handles to filenames.
adopted these changes in pre and post processing scripts.
unified behavior and look.
fixed bugs here and there.
improved functionality.
2015-08-07 19:03:26 +00:00
Chen Zhang
08f4495721
changed readArray default behavior to reading always scalars when columns are referenced by number
2015-07-21 20:44:40 +00:00
Philip Eisenlohr
c46e639a38
fixed bug preventing first line to be read when using readArray without labels.
2015-07-09 03:40:15 +00:00
Philip Eisenlohr
16edd1693d
now only trying to close input and output tables.
...
corrected buggy behavior in case no columns found in data_readArray.
2015-06-19 06:08:09 +00:00
Philip Eisenlohr
3d7dfba40a
syntax polishing
2015-06-13 11:43:34 +00:00
Philip Eisenlohr
48f31f13a6
label_index now transparently searches for “1_”+label if label itself not found.
...
added label_dimension method returning the dimension of the requested object, i.e. 1, 3, or 9 as typical outcomes.
2015-06-08 05:02:11 +00:00
Philip Eisenlohr
83d5686995
added check before trying to delete/dismiss file
2015-06-06 11:18:39 +00:00
Philip Eisenlohr
5adbe74b10
changed library function name table.labels_index() to table.label_index()
2015-06-05 11:44:17 +00:00
Philip Eisenlohr
4bd44f8e43
better robustness against scalar arguments and “None”.
2015-05-21 21:53:54 +00:00
Philip Eisenlohr
99adf42f0f
improved robustness of labels_index determination.
...
fixed errors in data_readArray and improved functionality. Can now cope with list of columns. reads all valid columns returning list of invalid ones. updates table.labels accordingly.
2015-05-21 00:02:32 +00:00
Philip Eisenlohr
06f017effa
added possibility to dismiss (delete) output file upon closing an ASCIItable.
...
“None” labels are disregarded in labels_index() method.
2015-05-19 21:11:49 +00:00
Philip Eisenlohr
9f569d04c6
added “.close()” method to close input and output at the same time.
...
accept header only if space present between number and “head” string.
2015-05-19 20:35:56 +00:00
Martin Diehl
fa1368204d
fixed bug in asciitable when updating labels for readArray, fixed checking for euler angels presence in tessellation, improved help
2015-05-14 17:07:50 +00:00
Martin Diehl
b60f868a76
renumbering asciitable when readArray for selected columns only
...
test no longer for deleteColumn
2015-05-10 11:29:11 +00:00
Philip Eisenlohr
d5e2e42f21
file handle closing can now be done from within class.
...
methods:
.input_close()
.output_close()
2014-08-22 15:37:46 +00:00
Martin Diehl
a8ced53b59
fix for the fix. now both, single column and single line files are working
2014-08-07 08:51:25 +00:00
Martin Diehl
1402527f48
fixed nasty bug cause strange behavior for voronoi tessellation
2014-08-06 19:32:26 +00:00
Martin Diehl
342ca0be47
tested new scripts to update shebang, all files got same shebang (and for python files encoding)
2014-04-01 18:41:14 +00:00
Philip Eisenlohr
4e5803fc36
forgot to clear readBuffer upon data_rewinding...
2014-02-06 16:37:45 +00:00
Philip Eisenlohr
ccb950f3d8
checked Unix command piping conformity -- seems to now work:
...
seeds_fromRandom |
geom_fromVoronoiTessellation |
geom_grainGrowth |
geom_unpack |
geom_pack
However, grainGrowth functionality seems broken...
2014-02-03 23:44:29 +00:00
Martin Diehl
83e4bc3247
updated test for restart, now also checking if number of increments is the same
...
fixed output of test class
fixed small bug? in asciitable.py, @philip: please check
2014-02-03 19:30:28 +00:00
Martin Diehl
2f1db8f69a
introduced delimiter option (default = tab) for ascii table output, use space for geometry files
2013-12-17 08:16:29 +00:00
Philip Eisenlohr
e20ffb379d
changed numpy.readtxt logic from "data_asArray" returning a copy to inplace "data_readArray" now directly storing into self.data
2013-12-14 03:51:22 +00:00
Philip Eisenlohr
0e84db8f19
improved stability of xxx_append commands when dealing with iterable content
2013-12-12 02:36:05 +00:00
Philip Eisenlohr
9c7335f799
bug fix: wrong variable name "label" --> "labels"
2013-12-11 14:38:09 +00:00
Philip Eisenlohr
c1b5b802ec
fixed problem of adding strings in "data_append" resulting in infinite recursion.
...
more gracefully check for problems.
numpy.loadtxt now correctly transposes single column of data.
2013-12-09 15:45:18 +00:00