brendanvk
f010aa97d9
Fix non-cube geometry structure, reduce memory
2017-02-24 22:30:04 -05:00
Brendan Vande Kieft
e5e6bed5de
Improve performance and generalize primitive shape
...
- Behavior is mostly unchanged, but the primitive may be shifted by a voxel when compared to the previous version, which had rounding issues near the edge of the primitive.
- exponent flag specifies the exponents that satisfy the equation x^e1 + y^e2 + z^e3 < 1. (1,1,1) gives an octahedron, (2,2,2) a sphere, and large values (1e10, 1e10, 1e10) gives a hexahedral box for any reasonable resolution. Mixing the two can produce a cylinder, (1e10, 2, 2) gives one with rotational symmetry about the x-axis.
2017-02-24 00:42:28 -05:00
Martin Diehl
a9d72c54b6
was not python3 conforming
2017-02-04 01:07:24 +01:00
Philip Eisenlohr
49eb7aa1be
fixed nasty ABS that caused wrong packing for 1,2,1,1,1,... and the like
2016-12-25 12:39:49 -05:00
Philip Eisenlohr
3628deb30e
changed option name from "no-config" to more common "without-config"
2016-12-23 17:46:16 -05:00
Philip Eisenlohr
d67be0e3f3
reduced memory footprint (substantially) by switching to 32bit precision
2016-12-08 23:36:19 -05:00
Philip Eisenlohr
c8f321356d
prefill immutable indices with closest mutable one
...
Retain only orginially immutable locations, not those where immutability bled into.
Changed threshold for change from 0.5 to 0.95 of max diffusedEnergy.
2016-12-08 09:47:20 -05:00
Philip Eisenlohr
9bb4f89e78
removed leftover debug output
2016-12-06 21:36:45 -05:00
Philip Eisenlohr
a2db7e9ba1
added option to suppress writing of material.config part in header
2016-12-06 21:36:25 -05:00
Philip Eisenlohr
cb95f3b244
fixed systematic drift of grain structure along -[1,1,1]
...
correction of periodic Gauss kernel extension, inclusion of ndimage.gaussian_filter alternative (same runtime as FFT), proper output handling of grids <3D
2016-11-30 09:39:13 -05:00
Philip Eisenlohr
40de6910b8
added --float option to translate real-valued grid data
2016-11-29 23:59:42 -05:00
Martin Diehl
a04968d43f
Merge branch 'development' into negativeRange
2016-11-01 17:20:56 +01:00
Martin Diehl
8593fb3ed7
unifying scripts
2016-10-31 22:11:16 +01:00
Philip Eisenlohr
4acfc73fa1
Merge branch 'Python3' into development
2016-10-31 11:28:40 -04:00
Philip Eisenlohr
94fcc9ad24
fixed language and syntax
2016-10-31 10:40:58 -04:00
Martin Diehl
8eb93a3274
python scripts now pack "a a-1 a-2 ... a-n" to "a to a-n"
2016-10-29 10:49:40 +02:00
Martin Diehl
aa3dc56949
fixed handling of last line (bug fix for second but last commit)
2016-10-29 10:30:42 +02:00
Martin Diehl
7e6e2e1c84
not using reserverd keyword "type"
2016-10-29 10:28:34 +02:00
Martin Diehl
1a56ad7a72
no logic change yet
2016-10-29 10:21:00 +02:00
Martin Diehl
6d9d25ea43
python 3 compatible and modernized
2016-10-28 15:40:17 +02:00
Martin Diehl
e43e37aae1
new style option setting
2016-10-27 23:06:17 +02:00
Martin Diehl
8a94f55a2e
python 3 compatibility
2016-10-25 06:44:12 +02:00
Martin Diehl
f78f89fb12
periodic microstructure needs to be updated per iteration (N).
...
now calling script twice gives the same result as one call with N=2.
results for N=1 are not affected
2016-10-05 15:24:37 +02:00
Martin Diehl
3abf0bc2d3
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into miscImprovements
2016-09-27 06:22:52 +02:00
Aritra Chakraborty
0ffd74d536
correct flag "data" for updated vtk_addRectilinearGridData
2016-09-26 16:32:39 -04:00
Aritra Chakraborty
1d06e82700
grain circumference identification
...
fixed right most path selection criteria for grain circumference
2016-09-26 16:30:50 -04:00
Philip Eisenlohr
5345b42d71
improved robustness against faulty RCB data
...
deals gracefully with duplicate segments, new option to export cleaned up RCB
2016-09-25 21:18:53 -04:00
Martin Diehl
e20623845a
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into miscImprovements
2016-09-22 16:14:07 +02:00
Martin Diehl
25103205a8
bug fix, adjust to options change of vtk_addXXXData
2016-09-21 22:01:16 +02:00
Martin Diehl
0f636bf6c3
not needed
2016-09-21 17:47:37 +02:00
Martin Diehl
4cd8fe7f36
indices should be integers (visible warning)
2016-09-21 17:45:23 +02:00
Martin Diehl
43457dcfc5
flexible selection of axes
2016-09-21 17:43:07 +02:00
Martin Diehl
4ccc0cf5a1
tool to mirror geometries (enforce periodicity on measured data)
2016-09-21 17:06:50 +02:00
Brendan Robert Vande Kieft
1180c8bb88
Fix calculation of interfaceEnergy
2016-09-15 17:36:43 -04:00
Philip Eisenlohr
eb69d6f4f1
Merged branch development into development
2016-09-14 19:42:15 -04:00
Philip Eisenlohr
59c1eee16b
added possibility to restrict seed coordinates to fraction of unit box
2016-09-14 19:42:05 -04:00
chen
804931db9e
force type cast index to int for numpy array
...
Force type casting indices into int array to avoid warning:
VisibleDeprecationWarning: using a non-integer number instead of an integer will result in an error in the future
For more info, see http://stackoverflow.com/questions/20084218/deprecation-warning-in-scikit-learn-svmlight-format-loader
2016-09-12 19:09:48 -04:00
Martin Diehl
c05307a273
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into miscImprovements
2016-09-03 14:35:53 +02:00
Zhuowen Zhao
f984f1ebea
enable floating point data and corrected counting of microstructures
2016-08-24 16:05:50 -04:00
Martin Diehl
7710f4d444
hybridIA (stand alone script and DAMASK) need standard ASCII table
...
export of TSL OIM is similar to standard ASCII table, simply add correct header
including labels
2016-08-23 17:21:17 +02:00
Martin Diehl
2a0be6d232
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into miscImprovements
2016-07-27 08:57:13 +02:00
Martin Diehl
1195593233
some casting was needed, corrected header
2016-07-25 19:39:09 +02:00
Philip Eisenlohr
99963ca1dd
Merged branch development into development
2016-07-24 19:19:03 -04:00
Philip Eisenlohr
6f527b2af8
fixed upperCase typo in vtk_addPointcloudData call
2016-07-24 19:18:48 -04:00
Martin Diehl
cd63a92733
using python 2.7 has shebang will also work on mac without symlink
...
unless someone uses the 6 year old python 2.6, this should be save
2016-07-18 19:35:35 +02:00
Martin Diehl
1b30b186f4
rootRelation keyword was still used
2016-07-18 06:17:22 +02:00
Martin Diehl
40414c767c
like ang_toTable (not sure if both are needed anyway)
2016-07-15 21:03:10 +02:00
Martin Diehl
e8153ad196
corrected name
2016-07-15 15:48:53 +02:00
Martin Diehl
c792b73b4e
simplified
2016-07-15 14:52:48 +02:00
Martin Diehl
7d84b99710
bugfix: axis out of bounds for np.repeat, np.tile seems to be ok @Philip: pls check. autodoc friendly help
2016-07-15 10:34:17 +02:00
Philip Eisenlohr
9e8adf731b
fixed buggy a.all() call
...
removed squaring of Laguerre weights (no clue why we considered this a good idea in the first place)
2016-07-07 15:23:01 -04:00
Martin Diehl
be99018ce3
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2016-05-18 18:28:57 +02:00
Philip Eisenlohr
a7c15b4c00
avoided quoting of "N of x" and "a to b".
2016-05-17 11:29:31 -04:00
Martin Diehl
fa3d8fa460
adopted description/simplified
2016-05-17 11:05:50 +02:00
Martin Diehl
fa5ebdd46b
added correct metavar
2016-05-13 09:43:56 +02:00
Martin Diehl
61c93bdbf4
adjusted help message for automated documentation
2016-05-12 08:54:34 +02:00
Martin Diehl
a21e8cd863
usind explicitly python2 to run in environments with python 3 as default
2016-05-11 11:01:39 +02:00
Martin Diehl
d497503411
renamed options.coords/options.coordinates consistently to options.pos
2016-04-26 22:49:58 +02:00
Philip Eisenlohr
0f0ca8cd71
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2016-04-25 10:24:30 -05:00
Philip Eisenlohr
36f41341ec
Merge branch 'SimplifiedvtkRectilinear' into development
2016-04-25 10:23:50 -05:00
zhangc43
7ed4ce859a
remove obsolete geom_frombarucentric script for microstructure reconstruction
2016-04-25 09:24:05 -04:00
Martin Diehl
2eb7ad7432
polishing
2016-04-25 12:59:15 +02:00
Martin Diehl
7ce208019c
Merge branch 'development' into miscImprovements
2016-04-25 12:36:02 +02:00
Martin Diehl
469ec4b00e
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into miscImprovements
2016-04-25 12:33:06 +02:00
Martin Diehl
d6002bdb10
removed remaining argument line
2016-04-25 09:08:24 +02:00
Martin Diehl
e8afd57536
seems to work
2016-04-25 08:40:36 +02:00
Philip Eisenlohr
db7c4bba45
same functionality can be accomplished with existing scripts.
...
addEuclideanDistance + geom_fromTable
(reLabel) + specify grid and size
2016-04-24 14:18:29 -05:00
Philip Eisenlohr
2daa162da2
renamed option "position" to "seedposition". now uses util.report_geom.
2016-04-24 14:12:10 -05:00
Philip Eisenlohr
4b7b473d2b
superseded by more modern vtk_* machinery
2016-04-24 13:46:25 -05:00
Philip Eisenlohr
478acb96ce
exchanged by more modern vtk_* machinery...
2016-04-24 13:38:36 -05:00
Martin Diehl
33391fcf5b
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2016-04-24 18:58:32 +02:00
Martin Diehl
ac9a9cb6ac
scripts deemed useless
2016-04-24 18:56:13 +02:00
Philip Eisenlohr
f1b5d40bac
now uses util.report_geometry. some additional modernizing on the fly.
2016-04-24 11:24:00 -05:00
Philip Eisenlohr
c37c0a8ed9
added awareness for Laguerre weights
2016-04-24 11:22:54 -05:00
Philip Eisenlohr
f42c316aa2
updated help
2016-04-24 10:14:16 -05:00
Philip Eisenlohr
9e5a8d2391
modernized string formatting, updated help strings, using label_indexrange for data-slicing.
2016-04-24 10:09:28 -05:00
Philip Eisenlohr
3b53d1bc82
polished option help messages
2016-04-22 14:20:36 -05:00
Philip Eisenlohr
24d029c7ed
speed up (x 5 to 10) identification of most frequent microstructure index
2016-04-15 18:54:09 -04:00
Martin Diehl
18f18aa4b9
detabbing
2016-04-11 19:55:55 +02:00
Martin Diehl
b1d714581c
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into miscImprovements
2016-04-10 15:40:52 +02:00
Philip Eisenlohr
b0496f20ca
grouped command line options.
...
removed functionality to add random second phase.
2016-04-08 17:47:02 -04:00
Philip Eisenlohr
2354cd609a
small polishing of help.
...
added option to change output number format.
2016-04-08 17:46:06 -04:00
Martin Diehl
97314619cc
corrections
2016-03-26 19:59:05 +01:00
Martin Diehl
7423c1a06a
not needed anymore
2016-03-24 18:47:11 +01:00
Martin Diehl
04d2148e61
will replace geom_fromAng (in combination with geom_fromTable)
2016-03-24 17:55:15 +01:00
Martin Diehl
809f03bef5
new printing for python3 and corrected help
2016-03-23 17:02:51 +01:00
Martin Diehl
900d2f7bf2
output follows damask.croak syntax
2016-03-23 11:05:36 +01:00
Philip Eisenlohr
a41cd3df40
added "strict" option to reading microstructure from geom file. will now complain if data mismatches with grid.
2016-03-20 16:46:35 -04:00
Philip Eisenlohr
6865987ea7
restored option to output microstructure indices as one-dimensional list (not clear why that got lost!)
2016-03-20 15:01:47 -04:00
Aritra Chakraborty
0f78f1c747
possibility to treat floating point numbers as microstructure indices
2016-03-17 18:09:22 -04:00
Philip Eisenlohr
4dfd59a9e2
output complete microstructure and texture info instead of limiting to grainIDs used in geometry
2016-03-07 22:15:40 -05:00
Martin Diehl
f13ba71f6e
fixed typo
2016-03-04 17:24:13 +01:00
Martin Diehl
48233d2767
missing variable
2016-03-03 14:58:04 +01:00
Martin Diehl
3ff3bb1a5b
pre processing finished
2016-03-03 14:44:51 +01:00
Martin Diehl
f7fedc4744
next bunch of accepted scripts
2016-03-02 13:50:57 +01:00
Martin Diehl
3ed3073eff
more...
2016-03-02 11:29:07 +01:00
Martin Diehl
c1dd5febd5
some more scripts passed
2016-03-01 22:27:21 +01:00
Martin Diehl
974b8cde41
some more syntax improvements
2016-03-01 22:13:57 +01:00
Martin Diehl
7c9d344601
python files now report their version depending on VERSION file in $DAMASK_ROOT
2016-01-27 17:06:00 +00:00
Martin Diehl
f693ead989
adding material.config to header
2015-12-28 16:36:26 +00:00