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DAMASK_EICMD
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still cannot link to petsc, but the rest is functioning properly

This commit is contained in:
zhangc43 2016-03-01 10:36:48 -05:00
parent 93d8c0045e
commit fee445e1bd
1 changed files with 59 additions and 19 deletions
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78
CMakeLists.txt
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@ -28,6 +28,44 @@ if (NOT DEFINED HDF5_DIR)
message (FATAL_ERROR "HDF5_DIR is not found!" )
endif (NOT DEFINED HDF5_DIR)
# brutal force to find the variables defined in PETSC
# ref:
# https://github.com/jedbrown/cmake-modules/blob/master/FindPETSc.cmake
set(petsc_conf_variables "${PETSC_DIR}/lib/petsc/conf/variables")
set(petsc_conf_rules "${PETSC_DIR}/lib/petsc/conf/rules" )
# A temporary makefile to probe the PETSc configuration
set (petsc_config_makefile "${PROJECT_BINARY_DIR}/Makefile.petsc")
file (WRITE "${petsc_config_makefile}"
"## This file was autogenerated by FindPETSc.cmake
# PETSC_DIR = ${PETSC_DIR}
# PETSC_ARCH = ${PETSC_ARCH}
include ${petsc_conf_rules}
include ${petsc_conf_variables}
show:
\t-@echo -n \${\${VARIABLE}}
")
macro (PETSC_GET_VARIABLE name var)
set (${var} "NOTFOUND" CACHE INTERNAL "Cleared" FORCE)
execute_process (COMMAND ${MAKE_EXECUTABLE} --no-print-directory -f ${petsc_config_makefile}
show VARIABLE=${name}
OUTPUT_VARIABLE ${var}
RESULT_VARIABLE petsc_return)
endmacro (PETSC_GET_VARIABLE)
petsc_get_variable (PETSC_LIB_DIR "PETSC_LIB_DIR" )
petsc_get_variable (PETSC_EXTERNAL_LIB_BASIC "PETSC_LIBS_EXTERNAL")
petsc_get_variable (PETSC_CCPPFLAGS "PETSC_CPP_LINE" )
petsc_get_variable (PETSC_INCLUDE "PETSC_INCLUDE" )
petsc_get_variable (PCC "PETSC_CC" )
petsc_get_variable (PCC_FLAGS "PETSC_CC_FLAGS" )
petsc_get_variable (MPIEXEC "PETSC_MPIEXEC" )
# We are done with the temporary Makefile, calling PETSC_GET_VARIABLE after this point is invalid!
# file (REMOVE ${petsc_config_makefile})
message("${PETSC_DIR}")
message("${PETSC_LIB_DIR}")
message("${PETSC_INCLUDE}")
# OUTPUT TYPE
set (SPECTRAL OFF)
set (FEM OFF)
@ -52,7 +90,9 @@ include_directories(${CMAKE_SOURCE_DIR}/code
lib
${HDF5_DIR}/include
)
link_directories(${HDF5_DIR}/lib)
link_directories(${HDF5_DIR}/lib
${PETSC_DIR}/lib
${PETSC_EXTERNAL_LIB_BASIC})
##
# set compile and debug flags
@ -254,24 +294,24 @@ set (LINK_OPTIONS_ifort "-shared-intel")
#-fno-fast-math:
# --> otherwise, when setting -ffast-math, isnan always evaluates to false (I would call it a bug)
###################################################################################################
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -DDAMASKVERSION=${DAMASKVERSION}")
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -xf95-cpp-input" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -ffree-line-length-240" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -fimplicit-none" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -fmodule-private" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wall" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wextra" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wcharacter-truncation" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wunderflow" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wsuggest-attribute=pure" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wsuggest-attribute=noreturn" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wconversion-extra" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wimplicit-procedure" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wno-unused-parameter" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -fno-range-check" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -fall-intrinsics" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -fno-fast-math" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -fall-intrinsics" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -DDAMASKVERSION=\\\"${DAMASKVERSION}\\\"")
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -xf95-cpp-input" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -ffree-line-length-240" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -fimplicit-none" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -fmodule-private" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wall" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wextra" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wcharacter-truncation" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wunderflow" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wsuggest-attribute=pure" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wsuggest-attribute=noreturn" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wconversion-extra" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wimplicit-procedure" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -Wno-unused-parameter" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -fno-range-check" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -fall-intrinsics" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -fno-fast-math" )
set (COMPILE_OPTIONS_gfortran "${COMPILE_OPTIONS_gfortran} -fall-intrinsics" )
###################################################################################################
# COMPILE SWITCHES FOR RUNTIME DEBUGGING
# -ffpe-trap=invalid,\ stop execution if floating point exception is detected (NaN is silent)