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DAMASK_EICMD
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Merge remote-tracking branch 'origin/development' into NewStyleKinematicHardening-3

This commit is contained in:
Martin Diehl 2019-01-05 21:21:02 +01:00
parent 2000eff578 4da61a0a5c
commit f354f04f49
81 changed files with 1613 additions and 6432 deletions
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39
.gitlab-ci.yml
View File

@ -158,12 +158,12 @@ Post_AverageDown:
- master
- release
#Post_General:
# stage: postprocessing
# script: PostProcessing/test.py
# except:
# - master
# - release
Post_General:
stage: postprocessing
script: PostProcessing/test.py
except:
- master
- release
Post_GeometryReconstruction:
stage: postprocessing
@ -364,12 +364,12 @@ Phenopowerlaw_singleSlip:
- master
- release
#TextureComponents:
# stage: spectral
# script: TextureComponents/test.py
# except:
# - master
# - release
TextureComponents:
stage: spectral
script: TextureComponents/test.py
except:
- master
- release
###################################################################################################
@ -468,27 +468,24 @@ AbaqusStd:
script:
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel $Doxygen
- $DAMASKROOT/PRIVATE/documenting/runDoxygen.sh $DAMASKROOT abaqus
except:
- master
- release
only:
- development
Marc:
stage: createDocumentation
script:
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel $Doxygen
- $DAMASKROOT/PRIVATE/documenting/runDoxygen.sh $DAMASKROOT marc
except:
- master
- release
only:
- development
Spectral:
stage: createDocumentation
script:
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel $Doxygen
- $DAMASKROOT/PRIVATE/documenting/runDoxygen.sh $DAMASKROOT spectral
except:
- master
- release
only:
- development
##################################################################################################
backupData:

2
DAMASK_prerequisites.sh
View File

@ -79,7 +79,7 @@ ls $PETSC_DIR/lib
firstLevel "Python"
DEFAULT_PYTHON=python3
for executable in python python2 python3 python2.7; do
for executable in python python3; do
getDetails $executable '--version'
done
secondLevel "Details on $DEFAULT_PYTHON:"

2
LICENSE
View File

@ -1,4 +1,4 @@
Copyright 2011-18 Max-Planck-Institut für Eisenforschung GmbH
Copyright 2011-19 Max-Planck-Institut für Eisenforschung GmbH
DAMASK is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by

4
Makefile
View File

@ -7,11 +7,11 @@ all: spectral FEM processing
.PHONY: spectral
spectral: build/spectral
@(cd build/spectral;make --no-print-directory -ws all install;)
@(cd build/spectral;make -j4 --no-print-directory -ws all install;)
.PHONY: FEM
FEM: build/FEM
@(cd build/FEM; make --no-print-directory -ws all install;)
@(cd build/FEM; make -j4 --no-print-directory -ws all install;)
.PHONY: build/spectral
build/spectral:

2
PRIVATE

@ -1 +1 @@
Subproject commit e9f93abaecafbfbf11072ae70bca213a7201ed38
Subproject commit 59b0cbe899f272476fb6f00f0f8860428e6ceba3

2
VERSION
View File

@ -1 +1 @@
v2.0.2-1124-g0ff9e9fa
v2.0.2-1277-g53bc24cc

11
env/DAMASK.csh vendored
View File

@ -7,6 +7,11 @@ set DAMASK_ROOT=`python -c "import os,sys; print(os.path.realpath(os.path.expand
source $DAMASK_ROOT/CONFIG
# add BRANCH if DAMASK_ROOT is a git repository
cd $DAMASK_ROOT >/dev/null
set BRANCH = `git branch 2>/dev/null| grep -E '^\* ')`
cd - >/dev/null
# if DAMASK_BIN is present
if ( $?DAMASK_BIN) then
set path = ($DAMASK_BIN $path)
@ -41,7 +46,7 @@ if ( $?prompt ) then
echo https://damask.mpie.de
echo
echo Using environment with ...
echo "DAMASK $DAMASK_ROOT"
echo "DAMASK $DAMASK_ROOT $BRANCH"
echo "Spectral Solver $SOLVER"
echo "Post Processing $PROCESSING"
if ( $?PETSC_DIR) then
@ -59,7 +64,7 @@ endif
setenv DAMASK_NUM_THREADS $DAMASK_NUM_THREADS
if ( ! $?PYTHONPATH ) then
setenv PYTHONPATH $DAMASK_ROOT/lib
setenv PYTHONPATH $DAMASK_ROOT/python
else
setenv PYTHONPATH $DAMASK_ROOT/lib:$PYTHONPATH
setenv PYTHONPATH $DAMASK_ROOT/python:$PYTHONPATH
endif

9
env/DAMASK.sh vendored
View File

@ -30,6 +30,9 @@ set() {
source $DAMASK_ROOT/CONFIG
unset -f set
# add BRANCH if DAMASK_ROOT is a git repository
cd $DAMASK_ROOT >/dev/null; BRANCH=$(git branch 2>/dev/null| grep -E '^\* '); cd - >/dev/null
# add DAMASK_BIN if present
[ "x$DAMASK_BIN" != "x" ] && PATH=$DAMASK_BIN:$PATH
@ -59,7 +62,7 @@ if [ ! -z "$PS1" ]; then
echo https://damask.mpie.de
echo
echo Using environment with ...
echo "DAMASK $DAMASK_ROOT"
echo "DAMASK $DAMASK_ROOT $BRANCH"
echo "Spectral Solver $SOLVER"
echo "Post Processing $PROCESSING"
if [ "x$PETSC_DIR" != "x" ]; then
@ -92,9 +95,9 @@ if [ ! -z "$PS1" ]; then
fi
export DAMASK_NUM_THREADS
export PYTHONPATH=$DAMASK_ROOT/lib:$PYTHONPATH
export PYTHONPATH=$DAMASK_ROOT/python:$PYTHONPATH
for var in BASE STAT SOLVER PROCESSING FREE DAMASK_BIN; do
for var in BASE STAT SOLVER PROCESSING FREE DAMASK_BIN BRANCH; do
unset "${var}"
done
for var in DAMASK MSC; do

21
env/DAMASK.zsh vendored
View File

@ -21,16 +21,19 @@ set() {
source $DAMASK_ROOT/CONFIG
unset -f set
# add BRANCH if DAMASK_ROOT is a git repository
cd $DAMASK_ROOT >/dev/null; BRANCH=$(git branch 2>/dev/null| grep -E '^\* '); cd - >/dev/null
# add DAMASK_BIN if present
[ "x$DAMASK_BIN != x" ] && PATH=$DAMASK_BIN:$PATH
[[ "x$DAMASK_BIN" != "x" ]] && PATH=$DAMASK_BIN:$PATH
SOLVER=$(which DAMASK_spectral || true 2>/dev/null)
[ "x$SOLVER" = "x" ] && SOLVER=$(blink 'Not found!')
[[ "x$SOLVER" == "x" ]] && SOLVER=$(blink 'Not found!')
PROCESSING=$(which postResults || true 2>/dev/null)
[ "x$PROCESSING" = "x" ] && PROCESSING=$(blink 'Not found!')
[[ "x$PROCESSING" == "x" ]] && PROCESSING=$(blink 'Not found!')
[ "x$DAMASK_NUM_THREADS" = "x" ] && DAMASK_NUM_THREADS=1
[[ "x$DAMASK_NUM_THREADS" == "x" ]] && DAMASK_NUM_THREADS=1
# currently, there is no information that unlimited causes problems
# still, http://software.intel.com/en-us/forums/topic/501500 suggest to fix it
@ -50,16 +53,16 @@ if [ ! -z "$PS1" ]; then
echo https://damask.mpie.de
echo
echo "Using environment with ..."
echo "DAMASK $DAMASK_ROOT"
echo "DAMASK $DAMASK_ROOT $BRANCH"
echo "Spectral Solver $SOLVER"
echo "Post Processing $PROCESSING"
if [ "x$PETSC_DIR" != "x" ]; then
if [ "x$PETSC_DIR" != "x" ]; then
echo -n "PETSc location "
[ -d $PETSC_DIR ] && echo $PETSC_DIR || blink $PETSC_DIR
[[ $(canonicalPath "$PETSC_DIR") == $PETSC_DIR ]] \
|| echo " ~~> "$(canonicalPath "$PETSC_DIR")
fi
[[ "x$PETSC_ARCH" == "x" ]] \
[[ "x$PETSC_ARCH" == "x" ]] \
|| echo "PETSc architecture $PETSC_ARCH"
echo -n "MSC.Marc/Mentat "
[ -d $MSC_ROOT ] && echo $MSC_ROOT || blink $MSC_ROOT
@ -85,9 +88,9 @@ if [ ! -z "$PS1" ]; then
fi
export DAMASK_NUM_THREADS
export PYTHONPATH=$DAMASK_ROOT/lib:$PYTHONPATH
export PYTHONPATH=$DAMASK_ROOT/python:$PYTHONPATH
for var in BASE STAT SOLVER PROCESSING FREE DAMASK_BIN; do
for var in BASE STAT SOLVER PROCESSING FREE DAMASK_BIN BRANCH; do
unset "${var}"
done
for var in DAMASK MSC; do

1
examples/ConfigFiles/Phase_Phenopowerlaw_Aluminum.config
View File

@ -6,7 +6,6 @@ plasticity phenopowerlaw
(output) shearrate_slip
(output) resolvedstress_slip
(output) accumulated_shear_slip
(output) totalshear
lattice_structure fcc
Nslip 12 # per family

1
examples/ConfigFiles/Phase_Phenopowerlaw_BCC-Ferrite.config
View File

@ -19,4 +19,3 @@ tausat_slip 222.e6 412.7e6 # per family, optimization long
h0_slipslip 1000.0e6
interaction_slipslip 1 1 1.4 1.4 1.4 1.4
w0_slip 2.0
(output) totalshear

1
examples/ConfigFiles/Phase_Phenopowerlaw_BCC-Martensite.config
View File

@ -19,4 +19,3 @@ tausat_slip 872.9e6 971.2e6 # per family
h0_slipslip 563.0e9
interaction_slipslip 1 1 1.4 1.4 1.4 1.4
a_slip 2.0
(output) totalshear

2
examples/ConfigFiles/Phase_Phenopowerlaw_Gold.config
View File

@ -14,11 +14,9 @@ plasticity phenopowerlaw
(output) resistance_slip
(output) shearrate_slip
(output) resolvedstress_slip
(output) totalshear
(output) resistance_twin
(output) shearrate_twin
(output) resolvedstress_twin
(output) totalvolfrac_twin
lattice_structure fcc
Nslip 12 # per family

2
examples/ConfigFiles/Phase_Phenopowerlaw_Magnesium.config
View File

@ -9,11 +9,9 @@ elasticity hooke
(output) resistance_slip
(output) shearrate_slip
(output) resolvedstress_slip
(output) totalshear
(output) resistance_twin
(output) shearrate_twin
(output) resolvedstress_twin
(output) totalvolfrac_twin
lattice_structure hex
covera_ratio 1.62350 # from Tromans 2011, Elastic Anisotropy of HCP Metal Crystals and Polycrystals

2
examples/ConfigFiles/Phase_Phenopowerlaw_cpTi-alpha.config
View File

@ -5,11 +5,9 @@ elasticity hooke
# (output) resistance_slip
# (output) shearrate_slip
# (output) resolvedstress_slip
# (output) totalshear
# (output) resistance_twin
# (output) shearrate_twin
# (output) resolvedstress_twin
# (output) totalvolfrac_twin
lattice_structure hex
covera_ratio 1.587

2
examples/ConfigFiles/Phase_Phenopowerlaw_multiField.config
View File

@ -6,12 +6,10 @@ plasticity phenopowerlaw
(output) shearrate_slip
(output) resolvedstress_slip
(output) accumulated_shear_slip
(output) totalshear
(output) resistance_twin
(output) shearrate_twin
(output) resolvedstress_twin
(output) accumulated_shear_twin
(output) totalvolfrac_twin
lattice_structure fcc
Nslip 12 # per family

89
processing/post/addAPS34IDEstrainCoords.py
View File

@ -1,4 +1,4 @@
#!/usr/bin/env python2.7
#!/usr/bin/env python3
# -*- coding: UTF-8 no BOM -*-
import os,sys
@ -19,55 +19,50 @@ Transform X,Y,Z,F APS BeamLine 34 coordinates to x,y,z APS strain coordinates.
""", version = scriptID)
parser.add_option('-f','--frame', dest='frame', nargs=4, type='string', metavar='string string string string',
help='APS X,Y,Z coords, and depth F')
parser.set_defaults(frame = None)
parser.add_option('-f',
'--frame',
dest='frame',
metavar='string',
help='APS X,Y,Z coords')
parser.add_option('--depth',
dest='depth',
metavar='string',
help='depth')
(options,filenames) = parser.parse_args()
if options.frame is None:
parser.error('no data column specified...')
parser.error('frame not specified')
if options.depth is None:
parser.error('depth not specified')
# --- loop over input files ------------------------------------------------------------------------
datainfo = {'len':3,
'label':[]
}
datainfo['label'] += options.frame
# --- loop over input files -------------------------------------------------------------------------
if filenames == []:
filenames = ['STDIN']
if filenames == []: filenames = [None]
for name in filenames:
if name == 'STDIN':
file = {'name':'STDIN', 'input':sys.stdin, 'output':sys.stdout, 'croak':sys.stderr}
file['croak'].write('\033[1m'+scriptName+'\033[0m\n')
else:
if not os.path.exists(name): continue
file = {'name':name, 'input':open(name), 'output':open(name+'_tmp','w'), 'croak':sys.stderr}
file['croak'].write('\033[1m'+scriptName+'\033[0m: '+file['name']+'\n')
try: table = damask.ASCIItable(name = name,
buffered = False)
except: continue
damask.util.report(scriptName,name)
# ------------------------------------------ read header ------------------------------------------
table.head_read()
# ------------------------------------------ sanity checks -----------------------------------------
errors = []
if table.label_dimension(options.frame) != 3:
errors.append('input {} does not have dimension 3.'.format(options.frame))
if table.label_dimension(options.depth) != 1:
errors.append('input {} does not have dimension 1.'.format(options.depth))
if errors != []:
damask.util.croak(errors)
table.close(dismiss = True)
continue
table = damask.ASCIItable(file['input'],file['output'],buffered=False) # make unbuffered ASCII_table
table.head_read() # read ASCII header info
table.info_append(scriptID + '\t' + ' '.join(sys.argv[1:]))
# --------------- figure out columns to process ---------------------------------------------------
active = []
column = {}
columnMissing = False
for label in datainfo['label']:
key = label
if key in table.labels(raw = True):
active.append(label)
column[label] = table.labels.index(key) # remember columns of requested data
else:
file['croak'].write('column %s not found...\n'%label)
columnMissing = True
if columnMissing: continue
# ------------------------------------------ assemble header ---------------------------------------
table.labels_append(['%i_coord'%(i+1) for i in range(3)]) # extend ASCII header with new labels
table.head_write()
@ -77,21 +72,15 @@ for name in filenames:
RotMat2TSL=np.array([[1., 0., 0.],
[0., np.cos(theta), np.sin(theta)], # Orientation to account for -135 deg
[0., -np.sin(theta), np.cos(theta)]]) # rotation for TSL convention
vec = np.zeros(4)
outputAlive = True
while outputAlive and table.data_read(): # read next data line of ASCII table
for i,label in enumerate(active):
vec[i] = table.data[column[label]]
coord = list(map(float,table.data[table.label_index(options.frame):table.label_index(options.frame)+3]))
depth = float(table.data[table.label_index(options.depth)])
table.data_append(np.dot(RotMat2TSL,np.array([-vec[0], -vec[1],-vec[2]+vec[3]])))
table.data_append(np.dot(RotMat2TSL,np.array([-coord[0],-coord[1],-coord[2]+depth])))
outputAlive = table.data_write() # output processed line
# ------------------------------------------ output result -----------------------------------------
outputAlive and table.output_flush() # just in case of buffered ASCII table
# ------------------------------------------ output finalization -----------------------------------
table.input_close() # close input ASCII table (works for stdin)
table.output_close() # close output ASCII table (works for stdout)
if file['name'] != 'STDIN':
os.rename(file['name']+'_tmp',file['name']) # overwrite old one with tmp new
table.close() # close ASCII tables

1
processing/post/addEuclideanDistance.py
View File

@ -149,7 +149,6 @@ for name in filenames:
errors = []
remarks = []
column = {}
if not 3 >= table.label_dimension(options.pos) >= 1:
errors.append('coordinates "{}" need to have one, two, or three dimensions.'.format(options.pos))

117
processing/post/addGrainID.py
View File

@ -1,7 +1,7 @@
#!/usr/bin/env python2.7
#!/usr/bin/env python3
# -*- coding: UTF-8 no BOM -*-
import os,sys,time,copy
import os,sys,copy
import numpy as np
import damask
from optparse import OptionParser
@ -29,49 +29,28 @@ parser.add_option('-d',
parser.add_option('-s',
'--symmetry',
dest = 'symmetry',
type = 'string', metavar = 'string',
metavar = 'string',
help = 'crystal symmetry [%default]')
parser.add_option('-e',
'--eulers',
dest = 'eulers',
type = 'string', metavar = 'string',
help = 'label of Euler angles')
parser.add_option('--degrees',
dest = 'degrees',
action = 'store_true',
help = 'Euler angles are given in degrees [%default]')
parser.add_option('-m',
'--matrix',
dest = 'matrix',
type = 'string', metavar = 'string',
help = 'label of orientation matrix')
parser.add_option('-a',
dest = 'a',
type = 'string', metavar = 'string',
help = 'label of crystal frame a vector')
parser.add_option('-b',
dest = 'b',
type = 'string', metavar = 'string',
help = 'label of crystal frame b vector')
parser.add_option('-c',
dest = 'c',
type = 'string', metavar = 'string',
help = 'label of crystal frame c vector')
parser.add_option('-q',
'--quaternion',
parser.add_option('-o',
'--orientation',
dest = 'quaternion',
type = 'string', metavar = 'string',
help = 'label of quaternion')
metavar = 'string',
help = 'label of crystal orientation given as unit quaternion [%default]')
parser.add_option('-p',
'--pos', '--position',
dest = 'pos',
type = 'string', metavar = 'string',
metavar = 'string',
help = 'label of coordinates [%default]')
parser.add_option('--quiet',
dest='verbose',
action = 'store_false',
help = 'hide status bar (useful when piping to file)')
parser.set_defaults(disorientation = 5,
verbose = True,
quaternion = 'orientation',
symmetry = 'cubic',
pos = 'pos',
degrees = False,
)
(options, filenames) = parser.parse_args()
@ -79,22 +58,6 @@ parser.set_defaults(disorientation = 5,
if options.radius is None:
parser.error('no radius specified.')
input = [options.eulers is not None,
options.a is not None and \
options.b is not None and \
options.c is not None,
options.matrix is not None,
options.quaternion is not None,
]
if np.sum(input) != 1: parser.error('needs exactly one input format.')
(label,dim,inputtype) = [(options.eulers,3,'eulers'),
([options.a,options.b,options.c],[3,3,3],'frame'),
(options.matrix,9,'matrix'),
(options.quaternion,4,'quaternion'),
][np.where(input)[0][0]] # select input label that was requested
toRadians = np.pi/180.0 if options.degrees else 1.0 # rescale degrees to radians
cos_disorientation = np.cos(np.radians(options.disorientation/2.)) # cos of half the disorientation angle
# --- loop over input files -------------------------------------------------------------------------
@ -118,9 +81,9 @@ for name in filenames:
if not 3 >= table.label_dimension(options.pos) >= 1:
errors.append('coordinates "{}" need to have one, two, or three dimensions.'.format(options.pos))
if not np.all(table.label_dimension(label) == dim):
errors.append('input "{}" does not have dimension {}.'.format(label,dim))
else: column = table.label_index(label)
if not np.all(table.label_dimension(options.quaternion) == 4):
errors.append('input "{}" does not have dimension 4.'.format(options.quaternion))
else: column = table.label_index(options.quaternion)
if remarks != []: damask.util.croak(remarks)
if errors != []:
@ -131,34 +94,18 @@ for name in filenames:
# ------------------------------------------ assemble header ---------------------------------------
table.info_append(scriptID + '\t' + ' '.join(sys.argv[1:]))
table.labels_append('grainID_{}@{:g}'.format('+'.join(label)
if isinstance(label, (list,tuple))
else label,
options.disorientation)) # report orientation source and disorientation
table.labels_append('grainID_{}@{:g}'.format(options.quaternion,options.disorientation)) # report orientation source and disorientation
table.head_write()
# ------------------------------------------ process data ------------------------------------------
# ------------------------------------------ build KD tree -----------------------------------------
# --- start background messaging
bg = damask.util.backgroundMessage()
bg.start()
bg.set_message('reading positions...')
table.data_readArray(options.pos) # read position vectors
grainID = -np.ones(len(table.data),dtype=int)
start = tick = time.clock()
bg.set_message('building KD tree...')
Npoints = table.data.shape[0]
kdtree = spatial.KDTree(copy.deepcopy(table.data))
# ------------------------------------------ assign grain IDs --------------------------------------
tick = time.clock()
orientations = [] # quaternions found for grain
memberCounts = [] # number of voxels in grain
p = 0 # point counter
@ -169,26 +116,11 @@ for name in filenames:
table.data_rewind()
while table.data_read(): # read next data line of ASCII table
if p > 0 and p % 1000 == 0:
if options.verbose and Npoints > 100 and p%(Npoints//100) == 0: # report in 1% steps if possible and avoid modulo by zero
damask.util.progressBar(iteration=p,total=Npoints)
time_delta = (time.clock()-tick) * (len(grainID) - p) / p
bg.set_message('(%02i:%02i:%02i) processing point %i of %i (grain count %i)...'\
%(time_delta//3600,time_delta%3600//60,time_delta%60,p,len(grainID),np.count_nonzero(memberCounts)))
if inputtype == 'eulers':
o = damask.Orientation(Eulers = np.array(map(float,table.data[column:column+3]))*toRadians,
symmetry = options.symmetry).reduced()
elif inputtype == 'matrix':
o = damask.Orientation(matrix = np.array(map(float,table.data[column:column+9])).reshape(3,3).transpose(),
symmetry = options.symmetry).reduced()
elif inputtype == 'frame':
o = damask.Orientation(matrix = np.array(map(float,table.data[column[0]:column[0]+3] + \
table.data[column[1]:column[1]+3] + \
table.data[column[2]:column[2]+3])).reshape(3,3),
symmetry = options.symmetry).reduced()
elif inputtype == 'quaternion':
o = damask.Orientation(quaternion = np.array(map(float,table.data[column:column+4])),
symmetry = options.symmetry).reduced()
o = damask.Orientation(quaternion = np.array(list(map(float,table.data[column:column+4]))),
symmetry = options.symmetry).reduced()
matched = False
alreadyChecked = {}
@ -233,13 +165,12 @@ for name in filenames:
outputAlive = True
p = 0
damask.util.progressBar(iteration=1,total=1)
while outputAlive and table.data_read(): # read next data line of ASCII table
table.data_append(1+packingMap[grainID[p]]) # add (condensed) grain ID
outputAlive = table.data_write() # output processed line
p += 1
bg.set_message('done after {} seconds'.format(time.clock()-start))
# ------------------------------------------ output finalization -----------------------------------
table.close() # close ASCII tables

79
processing/post/addIPFcolor.py
View File

@ -1,7 +1,7 @@
#!/usr/bin/env python3
# -*- coding: UTF-8 no BOM -*-
import os,sys,math
import os,sys
import numpy as np
from optparse import OptionParser
import damask
@ -18,66 +18,29 @@ Add RGB color value corresponding to TSL-OIM scheme for inverse pole figures.
""", version = scriptID)
parser.add_option('-p', '--pole',
parser.add_option('-p',
'--pole',
dest = 'pole',
type = 'float', nargs = 3, metavar = 'float float float',
help = 'lab frame direction for inverse pole figure [%default]')
parser.add_option('-s', '--symmetry',
parser.add_option('-s',
'--symmetry',
dest = 'symmetry',
type = 'choice', choices = damask.Symmetry.lattices[1:], metavar='string',
help = 'crystal symmetry [%default] {{{}}} '.format(', '.join(damask.Symmetry.lattices[1:])))
parser.add_option('-e', '--eulers',
dest = 'eulers',
type = 'string', metavar = 'string',
help = 'Euler angles label')
parser.add_option('-d', '--degrees',
dest = 'degrees',
action = 'store_true',
help = 'Euler angles are given in degrees [%default]')
parser.add_option('-m', '--matrix',
dest = 'matrix',
type = 'string', metavar = 'string',
help = 'orientation matrix label')
parser.add_option('-a',
dest = 'a',
type = 'string', metavar = 'string',
help = 'crystal frame a vector label')
parser.add_option('-b',
dest = 'b',
type = 'string', metavar = 'string',
help = 'crystal frame b vector label')
parser.add_option('-c',
dest = 'c',
type = 'string', metavar = 'string',
help = 'crystal frame c vector label')
parser.add_option('-q', '--quaternion',
parser.add_option('-o',
'--orientation',
dest = 'quaternion',
type = 'string', metavar = 'string',
help = 'quaternion label')
metavar = 'string',
help = 'label of crystal orientation given as unit quaternion [%default]')
parser.set_defaults(pole = (0.0,0.0,1.0),
quaternion = 'orientation',
symmetry = damask.Symmetry.lattices[-1],
degrees = False,
)
(options, filenames) = parser.parse_args()
input = [options.eulers is not None,
options.a is not None and \
options.b is not None and \
options.c is not None,
options.matrix is not None,
options.quaternion is not None,
]
if np.sum(input) != 1: parser.error('needs exactly one input format.')
(label,dim,inputtype) = [(options.eulers,3,'eulers'),
([options.a,options.b,options.c],[3,3,3],'frame'),
(options.matrix,9,'matrix'),
(options.quaternion,4,'quaternion'),
][np.where(input)[0][0]] # select input label that was requested
toRadians = math.pi/180.0 if options.degrees else 1.0 # rescale degrees to radians
pole = np.array(options.pole)
pole /= np.linalg.norm(pole)
@ -98,12 +61,12 @@ for name in filenames:
# ------------------------------------------ sanity checks ----------------------------------------
if not np.all(table.label_dimension(label) == dim):
damask.util.croak('input {} does not have dimension {}.'.format(label,dim))
if not table.label_dimension(options.quaternion) == 4:
damask.util.croak('input {} does not have dimension 4.'.format(options.quaternion))
table.close(dismiss = True) # close ASCIItable and remove empty file
continue
column = table.label_index(label)
column = table.label_index(options.quaternion)
# ------------------------------------------ assemble header ---------------------------------------
@ -115,20 +78,8 @@ for name in filenames:
outputAlive = True
while outputAlive and table.data_read(): # read next data line of ASCII table
if inputtype == 'eulers':
o = damask.Orientation(Eulers = np.array(list(map(float,table.data[column:column+3])))*toRadians,
symmetry = options.symmetry).reduced()
elif inputtype == 'matrix':
o = damask.Orientation(matrix = np.array(list(map(float,table.data[column:column+9]))).reshape(3,3).transpose(),
symmetry = options.symmetry).reduced()
elif inputtype == 'frame':
o = damask.Orientation(matrix = np.array(list(map(float,table.data[column[0]:column[0]+3] + \
table.data[column[1]:column[1]+3] + \
table.data[column[2]:column[2]+3]))).reshape(3,3),
symmetry = options.symmetry).reduced()
elif inputtype == 'quaternion':
o = damask.Orientation(quaternion = np.array(list(map(float,table.data[column:column+4]))),
symmetry = options.symmetry).reduced()
o = damask.Orientation(quaternion = np.array(list(map(float,table.data[column:column+4]))),
symmetry = options.symmetry).reduced()
table.data_append(o.IPFcolor(pole))
outputAlive = table.data_write() # output processed line

2
processing/post/addInfo.py
View File

@ -1,4 +1,4 @@
#!/usr/bin/env python2.7
#!/usr/bin/env python3
# -*- coding: UTF-8 no BOM -*-
import os

11
processing/post/addMises.py
View File

@ -1,9 +1,10 @@
#!/usr/bin/env python2.7
#!/usr/bin/env python3
# -*- coding: UTF-8 no BOM -*-
import os,sys,math
import numpy as np
from optparse import OptionParser
from collections import OrderedDict
import damask
scriptName = os.path.splitext(os.path.basename(__file__))[0]
@ -63,10 +64,10 @@ for name in filenames:
# ------------------------------------------ sanity checks ----------------------------------------
items = {
'strain': {'dim': 9, 'shape': [3,3], 'labels':options.strain, 'active':[], 'column': []},
'stress': {'dim': 9, 'shape': [3,3], 'labels':options.stress, 'active':[], 'column': []},
}
items = OrderedDict([
('strain', {'dim': 9, 'shape': [3,3], 'labels':options.strain, 'active':[], 'column': []}),
('stress', {'dim': 9, 'shape': [3,3], 'labels':options.stress, 'active':[], 'column': []})
])
errors = []
remarks = []

143
processing/post/addOrientations.py
View File

@ -1,7 +1,7 @@
#!/usr/bin/env python3
# -*- coding: UTF-8 no BOM -*-
import os,sys,math
import os,sys
import numpy as np
from optparse import OptionParser
import damask
@ -9,6 +9,31 @@ import damask
scriptName = os.path.splitext(os.path.basename(__file__))[0]
scriptID = ' '.join([scriptName,damask.version])
# --------------------------------------------------------------------
# convention conformity checks
# --------------------------------------------------------------------
def check_Eulers(eulers):
if np.any(eulers < 0.0) or np.any(eulers > 2.0*np.pi) or eulers[1] > np.pi: # Euler angles within valid range?
raise ValueError('Euler angles outside of [0..2π],[0..π],[0..2π].\n{} {} {}.'.format(*eulers))
return eulers
def check_quaternion(q):
if q[0] < 0.0: # positive first quaternion component?
raise ValueError('quaternion has negative first component.\n{}'.format(q[0]))
if not np.isclose(np.linalg.norm(q), 1.0): # unit quaternion?
raise ValueError('quaternion is not of unit length.\n{} {} {} {}'.format(*q))
return q
def check_matrix(M):
if not np.isclose(np.linalg.det(M),1.0): # proper rotation?
raise ValueError('matrix is not a proper rotation.\n{}'.format(M))
if not np.isclose(np.dot(M[0],M[1]), 0.0) \
or not np.isclose(np.dot(M[1],M[2]), 0.0) \
or not np.isclose(np.dot(M[2],M[0]), 0.0): # all orthogonal?
raise ValueError('matrix is not orthogonal.\n{}'.format(M))
return M
# --------------------------------------------------------------------
# MAIN
# --------------------------------------------------------------------
@ -21,58 +46,64 @@ Additional (globally fixed) rotations of the lab frame and/or crystal frame can
""", version = scriptID)
outputChoices = ['quaternion','rodrigues','eulers']
parser.add_option('-o', '--output',
outputChoices = {
'quaternion': ['quat',4],
'rodrigues': ['rodr',3],
'eulers': ['eulr',3],
'matrix': ['mtrx',9],
'angleaxis': ['aaxs',4],
}
parser.add_option('-o',
'--output',
dest = 'output',
action = 'extend', metavar = '<string LIST>',
help = 'output orientation formats {{{}}}'.format(', '.join(outputChoices)))
parser.add_option('-s', '--symmetry',
dest = 'symmetry',
type = 'choice', choices = damask.Symmetry.lattices[1:], metavar='string',
help = 'crystal symmetry [%default] {{{}}} '.format(', '.join(damask.Symmetry.lattices[1:])))
parser.add_option('-d', '--degrees',
parser.add_option('-d',
'--degrees',
dest = 'degrees',
action = 'store_true',
help = 'angles are given in degrees [%default]')
parser.add_option('-R', '--labrotation',
help = 'all angles in degrees')
parser.add_option('-R',
'--labrotation',
dest='labrotation',
type = 'float', nargs = 4, metavar = ' '.join(['float']*4),
help = 'angle and axis of additional lab frame rotation')
parser.add_option('-r', '--crystalrotation',
parser.add_option('-r',
'--crystalrotation',
dest='crystalrotation',
type = 'float', nargs = 4, metavar = ' '.join(['float']*4),
help = 'angle and axis of additional crystal frame rotation')
parser.add_option( '--eulers',
parser.add_option('--eulers',
dest = 'eulers',
type = 'string', metavar = 'string',
metavar = 'string',
help = 'Euler angles label')
parser.add_option( '--rodrigues',
parser.add_option('--rodrigues',
dest = 'rodrigues',
type = 'string', metavar = 'string',
metavar = 'string',
help = 'Rodrigues vector label')
parser.add_option( '--matrix',
parser.add_option('--matrix',
dest = 'matrix',
type = 'string', metavar = 'string',
metavar = 'string',
help = 'orientation matrix label')
parser.add_option( '--quaternion',
parser.add_option('--quaternion',
dest = 'quaternion',
type = 'string', metavar = 'string',
metavar = 'string',
help = 'quaternion label')
parser.add_option('-a',
dest = 'a',
type = 'string', metavar = 'string',
help = 'crystal frame a vector label')
parser.add_option('-b',
dest = 'b',
type = 'string', metavar = 'string',
help = 'crystal frame b vector label')
parser.add_option('-c',
dest = 'c',
type = 'string', metavar = 'string',
help = 'crystal frame c vector label')
parser.add_option('-x',
dest = 'x',
metavar = 'string',
help = 'label of lab x vector (expressed in crystal coords)')
parser.add_option('-y',
dest = 'y',
metavar = 'string',
help = 'label of lab y vector (expressed in crystal coords)')
parser.add_option('-z',
dest = 'z',
metavar = 'string',
help = 'label of lab z vector (expressed in crystal coords)')
parser.set_defaults(output = [],
symmetry = damask.Symmetry.lattices[-1],
labrotation = (0.,1.,1.,1.), # no rotation about 1,1,1
crystalrotation = (0.,1.,1.,1.), # no rotation about 1,1,1
degrees = False,
@ -86,9 +117,9 @@ if options.output == [] or (not set(options.output).issubset(set(outputChoices))
input = [options.eulers is not None,
options.rodrigues is not None,
options.a is not None and \
options.b is not None and \
options.c is not None,
options.x is not None and \
options.y is not None and \
options.z is not None,
options.matrix is not None,
options.quaternion is not None,
]
@ -97,13 +128,14 @@ if np.sum(input) != 1: parser.error('needs exactly one input format.')
(label,dim,inputtype) = [(options.eulers,3,'eulers'),
(options.rodrigues,3,'rodrigues'),
([options.a,options.b,options.c],[3,3,3],'frame'),
([options.x,options.y,options.z],[3,3,3],'frame'),
(options.matrix,9,'matrix'),
(options.quaternion,4,'quaternion'),
][np.where(input)[0][0]] # select input label that was requested
toRadians = math.pi/180.0 if options.degrees else 1.0 # rescale degrees to radians
r = damask.Quaternion().fromAngleAxis(toRadians*options.crystalrotation[0],options.crystalrotation[1:]) # crystal frame rotation
R = damask.Quaternion().fromAngleAxis(toRadians*options. labrotation[0],options. labrotation[1:]) # lab frame rotation
toRadians = np.pi/180.0 if options.degrees else 1.0 # rescale degrees to radians
r = damask.Quaternion.fromAngleAxis(toRadians*options.crystalrotation[0],options.crystalrotation[1:]) # crystal frame rotation
R = damask.Quaternion.fromAngleAxis(toRadians*options. labrotation[0],options. labrotation[1:]) # lab frame rotation
# --- loop over input files ------------------------------------------------------------------------
@ -137,32 +169,31 @@ for name in filenames:
table.info_append(scriptID + '\t' + ' '.join(sys.argv[1:]))
for output in options.output:
if output == 'quaternion': table.labels_append(['{}_{}_{}({})'.format(i+1,'quat',options.symmetry,label) for i in range(4)])
elif output == 'rodrigues': table.labels_append(['{}_{}_{}({})'.format(i+1,'rodr',options.symmetry,label) for i in range(3)])
elif output == 'eulers': table.labels_append(['{}_{}_{}({})'.format(i+1,'eulr',options.symmetry,label) for i in range(3)])
if output in outputChoices:
table.labels_append(['{}_{}({})'.format(i+1,outputChoices[output][0],label) \
for i in range(outputChoices[output][1])])
table.head_write()
# ------------------------------------------ process data ------------------------------------------
outputAlive = True
while outputAlive and table.data_read(): # read next data line of ASCII table
if inputtype == 'eulers':
o = damask.Orientation(Eulers = np.array(list(map(float,table.data[column:column+3])))*toRadians,
symmetry = options.symmetry).reduced()
if inputtype == 'eulers':
o = damask.Orientation(Eulers = check_Eulers(np.array(list(map(float,table.data[column:column+3])))*toRadians))
elif inputtype == 'rodrigues':
o = damask.Orientation(Rodrigues= np.array(list(map(float,table.data[column:column+3]))),
symmetry = options.symmetry).reduced()
o = damask.Orientation(Rodrigues = np.array(list(map(float,table.data[column:column+3]))))
elif inputtype == 'matrix':
o = damask.Orientation(matrix = np.array(list(map(float,table.data[column:column+9]))).reshape(3,3).transpose(),
symmetry = options.symmetry).reduced()
o = damask.Orientation(matrix = check_matrix(np.array(list(map(float,table.data[column:column+9]))).reshape(3,3)))
elif inputtype == 'frame':
o = damask.Orientation(matrix = np.array(list(map(float,table.data[column[0]:column[0]+3] + \
table.data[column[1]:column[1]+3] + \
table.data[column[2]:column[2]+3]))).reshape(3,3),
symmetry = options.symmetry).reduced()
M = np.array(list(map(float,table.data[column[0]:column[0]+3] + \
table.data[column[1]:column[1]+3] + \
table.data[column[2]:column[2]+3]))).reshape(3,3).T
o = damask.Orientation(matrix = check_matrix(M/np.linalg.norm(M,axis=0)))
elif inputtype == 'quaternion':
o = damask.Orientation(quaternion = np.array(list(map(float,table.data[column:column+4]))),
symmetry = options.symmetry).reduced()
o = damask.Orientation(quaternion = check_quaternion(np.array(list(map(float,table.data[column:column+4])))))
o.quaternion = r*o.quaternion*R # apply additional lab and crystal frame rotations
@ -170,6 +201,8 @@ for name in filenames:
if output == 'quaternion': table.data_append(o.asQuaternion())
elif output == 'rodrigues': table.data_append(o.asRodrigues())
elif output == 'eulers': table.data_append(o.asEulers(degrees=options.degrees))
elif output == 'matrix': table.data_append(o.asMatrix())
elif output == 'angleaxis': table.data_append(o.asAngleAxis(degrees=options.degrees,flat=True))
outputAlive = table.data_write() # output processed line
# ------------------------------------------ output finalization -----------------------------------

86
processing/post/addPole.py
View File

@ -1,7 +1,7 @@
#!/usr/bin/env python2.7
#!/usr/bin/env python3
# -*- coding: UTF-8 no BOM -*-
import os,sys,math
import os,sys
import numpy as np
from optparse import OptionParser
import damask
@ -14,70 +14,32 @@ scriptID = ' '.join([scriptName,damask.version])
# --------------------------------------------------------------------
parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [file[s]]', description = """
Add x,y coordinates of stereographic projection of given direction (pole) in crystal frame.
Add coordinates of stereographic projection of given direction (pole) in crystal frame.
""", version = scriptID)
parser.add_option('-p', '--pole',
parser.add_option('-p',
'--pole',
dest = 'pole',
type = 'float', nargs = 3, metavar = 'float float float',
help = 'crystal frame direction for pole figure [%default]')
parser.add_option('--polar',
dest = 'polar',
action = 'store_true',
help = 'output polar coordinates r,phi [%default]')
parser.add_option('-e', '--eulers',
dest = 'eulers',
type = 'string', metavar = 'string',
help = 'Euler angles label')
parser.add_option('-d', '--degrees',
dest = 'degrees',
action = 'store_true',
help = 'Euler angles are given in degrees [%default]')
parser.add_option('-m', '--matrix',
dest = 'matrix',
type = 'string', metavar = 'string',
help = 'orientation matrix label')
parser.add_option('-a',
dest = 'a',
type = 'string', metavar = 'string',
help = 'crystal frame a vector label')
parser.add_option('-b',
dest = 'b',
type = 'string', metavar = 'string',
help = 'crystal frame b vector label')
parser.add_option('-c',
dest = 'c',
type = 'string', metavar = 'string',
help = 'crystal frame c vector label')
parser.add_option('-q', '--quaternion',
help = 'output polar coordinates (r,φ) instead of Cartesian coordinates (x,y)')
parser.add_option('-o',
'--orientation',
dest = 'quaternion',
type = 'string', metavar = 'string',
help = 'quaternion label')
metavar = 'string',
help = 'label of crystal orientation given as unit quaternion [%default]')
parser.set_defaults(pole = (1.0,0.0,0.0),
degrees = False,
quaternion = 'orientation',
polar = False,
)
(options, filenames) = parser.parse_args()
input = [options.eulers is not None,
options.a is not None and \
options.b is not None and \
options.c is not None,
options.matrix is not None,
options.quaternion is not None,
]
if np.sum(input) != 1: parser.error('needs exactly one input format.')
(label,dim,inputtype) = [(options.eulers,3,'eulers'),
([options.a,options.b,options.c],[3,3,3],'frame'),
(options.matrix,9,'matrix'),
(options.quaternion,4,'quaternion'),
][np.where(input)[0][0]] # select input label that was requested
toRadians = math.pi/180.0 if options.degrees else 1.0 # rescale degrees to radians
pole = np.array(options.pole)
pole /= np.linalg.norm(pole)
@ -98,18 +60,13 @@ for name in filenames:
# ------------------------------------------ sanity checks ----------------------------------------
errors = []
remarks = []
if not np.all(table.label_dimension(label) == dim): errors.append('input {} does not have dimension {}.'.format(label,dim))
else: column = table.label_index(label)
if remarks != []: damask.util.croak(remarks)
if errors != []:
damask.util.croak(errors)
table.close(dismiss = True)
if not table.label_dimension(options.quaternion) == 4:
damask.util.croak('input {} does not have dimension 4.'.format(options.quaternion))
table.close(dismiss = True) # close ASCIItable and remove empty file
continue
column = table.label_index(options.quaternion)
# ------------------------------------------ assemble header ---------------------------------------
table.info_append(scriptID + '\t' + ' '.join(sys.argv[1:]))
@ -119,16 +76,7 @@ for name in filenames:
# ------------------------------------------ process data ------------------------------------------
outputAlive = True
while outputAlive and table.data_read(): # read next data line of ASCII table
if inputtype == 'eulers':
o = damask.Orientation(Eulers = np.array(list(map(float,table.data[column:column+3])))*toRadians)
elif inputtype == 'matrix':
o = damask.Orientation(matrix = np.array(list(map(float,table.data[column:column+9]))).reshape(3,3).transpose())
elif inputtype == 'frame':
o = damask.Orientation(matrix = np.array(list(map(float,table.data[column[0]:column[0]+3] + \
table.data[column[1]:column[1]+3] + \
table.data[column[2]:column[2]+3]))).reshape(3,3))
elif inputtype == 'quaternion':
o = damask.Orientation(quaternion = np.array(list(map(float,table.data[column:column+4]))))
o = damask.Orientation(quaternion = np.array(list(map(float,table.data[column:column+4]))))
rotatedPole = o.quaternion*pole # rotate pole according to crystal orientation
(x,y) = rotatedPole[0:2]/(1.+abs(pole[2])) # stereographic projection

83
processing/post/addSchmidfactors.py
View File

@ -109,64 +109,42 @@ Add columns listing Schmid factors (and optional trace vector of selected system
""", version = scriptID)
latticeChoices = ('fcc','bcc','hex')
parser.add_option('-l','--lattice',
parser.add_option('-l',
'--lattice',
dest = 'lattice', type = 'choice', choices = latticeChoices, metavar='string',
help = 'type of lattice structure [%default] {}'.format(latticeChoices))
parser.add_option('--covera',
dest = 'CoverA', type = 'float', metavar = 'float',
help = 'C over A ratio for hexagonal systems')
parser.add_option('-f', '--force',
parser.add_option('-f',
'--force',
dest = 'force',
type = 'float', nargs = 3, metavar = 'float float float',
help = 'force direction in lab frame [%default]')
parser.add_option('-n', '--normal',
parser.add_option('-n',
'--normal',
dest = 'normal',
type = 'float', nargs = 3, metavar = 'float float float',
help = 'stress plane normal in lab frame [%default]')
parser.add_option('-e', '--eulers',
dest = 'eulers',
type = 'string', metavar = 'string',
help = 'Euler angles label')
parser.add_option('-d', '--degrees',
dest = 'degrees',
action = 'store_true',
help = 'Euler angles are given in degrees [%default]')
parser.add_option('-m', '--matrix',
dest = 'matrix',
type = 'string', metavar = 'string',
help = 'orientation matrix label')
parser.add_option('-a',
dest = 'a',
type = 'string', metavar = 'string',
help = 'crystal frame a vector label')
parser.add_option('-b',
dest = 'b',
type = 'string', metavar = 'string',
help = 'crystal frame b vector label')
parser.add_option('-c',
dest = 'c',
type = 'string', metavar = 'string',
help = 'crystal frame c vector label')
parser.add_option('-q', '--quaternion',
help = 'stress plane normal in lab frame, per default perpendicular to the force')
parser.add_option('-o',
'--orientation',
dest = 'quaternion',
type = 'string', metavar = 'string',
help = 'quaternion label')
metavar = 'string',
help = 'label of crystal orientation given as unit quaternion [%default]')
parser.set_defaults(force = (0.0,0.0,1.0),
quaternion='orientation',
normal = None,
lattice = latticeChoices[0],
CoverA = math.sqrt(8./3.),
degrees = False,
)
(options, filenames) = parser.parse_args()
toRadians = math.pi/180.0 if options.degrees else 1.0 # rescale degrees to radians
force = np.array(options.force)
force /= np.linalg.norm(force)
if options.normal:
if options.normal is not None:
normal = np.array(options.normal)
normal /= np.linalg.norm(normal)
if abs(np.dot(force,normal)) > 1e-3:
@ -174,22 +152,6 @@ if options.normal:
else:
normal = force
input = [options.eulers is not None,
options.a is not None and \
options.b is not None and \
options.c is not None,
options.matrix is not None,
options.quaternion is not None,
]
if np.sum(input) != 1: parser.error('needs exactly one input format.')
(label,dim,inputtype) = [(options.eulers,3,'eulers'),
([options.a,options.b,options.c],[3,3,3],'frame'),
(options.matrix,9,'matrix'),
(options.quaternion,4,'quaternion'),
][np.where(input)[0][0]] # select input label that was requested
slip_direction = np.zeros((len(slipSystems[options.lattice]),3),'f')
slip_normal = np.zeros_like(slip_direction)
@ -227,13 +189,12 @@ for name in filenames:
table.head_read()
# ------------------------------------------ sanity checks ----------------------------------------
if not np.all(table.label_dimension(label) == dim):
damask.util.croak('input {} does not have dimension {}.'.format(label,dim))
if not table.label_dimension(options.quaternion) == 4:
damask.util.croak('input {} does not have dimension 4.'.format(options.quaternion))
table.close(dismiss = True) # close ASCIItable and remove empty file
continue
column = table.label_index(label)
column = table.label_index(options.quaternion)
# ------------------------------------------ assemble header ---------------------------------------
@ -251,17 +212,7 @@ for name in filenames:
outputAlive = True
while outputAlive and table.data_read(): # read next data line of ASCII table
if inputtype == 'eulers':
o = damask.Orientation(Eulers = np.array(list(map(float,table.data[column:column+3])))*toRadians,)
elif inputtype == 'matrix':
o = damask.Orientation(matrix = np.array(list(map(float,table.data[column:column+9]))).reshape(3,3).transpose(),)
elif inputtype == 'frame':
o = damask.Orientation(matrix = np.array(list(map(float,table.data[column[0]:column[0]+3] + \
table.data[column[1]:column[1]+3] + \
table.data[column[2]:column[2]+3]))).reshape(3,3),)
elif inputtype == 'quaternion':
o = damask.Orientation(quaternion = np.array(list(map(float,table.data[column:column+4]))),)
o = damask.Orientation(quaternion = np.array(list(map(float,table.data[column:column+4]))))
table.data_append( np.abs( np.sum(slip_direction * (o.quaternion * force) ,axis=1) \
* np.sum(slip_normal * (o.quaternion * normal),axis=1)))

5
processing/post/binXY.py
View File

@ -1,4 +1,4 @@
#!/usr/bin/env python2.7
#!/usr/bin/env python3
# -*- coding: UTF-8 no BOM -*-
import os,sys
@ -118,10 +118,9 @@ for name in filenames:
minmax[c] = np.log(minmax[c]) # change minmax to log, too
delta = minmax[:,1]-minmax[:,0]
(grid,xedges,yedges) = np.histogram2d(table.data[:,0],table.data[:,1],
bins=options.bins,
range=minmax,
range=minmax[:2],
weights=None if options.weight is None else table.data[:,2])
if options.normCol:

44
processing/post/groupTable.py
View File

@ -1,4 +1,4 @@
#!/usr/bin/env python2.7
#!/usr/bin/env python3
# -*- coding: UTF-8 no BOM -*-
import os,sys
@ -21,18 +21,19 @@ scriptID = ' '.join([scriptName,damask.version])
# --------------------------------------------------------------------
parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [file[s]]', description = """
Apply a user-specified function to condense all rows for which column 'label' has identical values into a single row.
Output table will contain as many rows as there are different (unique) values in the grouping column.
Apply a user-specified function to condense into a single row all those rows for which columns 'label' have identical values.
Output table will contain as many rows as there are different (unique) values in the grouping column(s).
Periodic domain averaging of coordinate values is supported.
Examples:
For grain averaged values, replace all rows of particular 'texture' with a single row containing their average.
""", version = scriptID)
{name} --label texture --function np.average data.txt
""".format(name = scriptName), version = scriptID)
parser.add_option('-l','--label',
dest = 'label',
type = 'string', metavar = 'string',
help = 'column label for grouping rows')
action = 'extend', metavar = '<string LIST>',
help = 'column label(s) for grouping rows')
parser.add_option('-f','--function',
dest = 'function',
type = 'string', metavar = 'string',
@ -40,7 +41,7 @@ parser.add_option('-f','--function',
parser.add_option('-a','--all',
dest = 'all',
action = 'store_true',
help = 'apply mapping function also to grouping column')
help = 'apply mapping function also to grouping column(s)')
group = OptionGroup(parser, "periodic averaging", "")
@ -57,6 +58,7 @@ parser.add_option_group(group)
parser.set_defaults(function = 'np.average',
all = False,
label = [],
boundary = [0.0, 1.0])
(options,filenames) = parser.parse_args()
@ -71,7 +73,7 @@ try:
except:
mapFunction = None
if options.label is None:
if options.label is []:
parser.error('no grouping column specified.')
if not hasattr(mapFunction,'__call__'):
parser.error('function "{}" is not callable.'.format(options.function))
@ -89,13 +91,20 @@ for name in filenames:
# ------------------------------------------ sanity checks ---------------------------------------
remarks = []
errors = []
table.head_read()
if table.label_dimension(options.label) != 1:
damask.util.croak('column {} is not of scalar dimension.'.format(options.label))
table.close(dismiss = True) # close ASCIItable and remove empty file
grpColumns = table.label_index(options.label)[::-1]
grpColumns = grpColumns[np.where(grpColumns>=0)]
if len(grpColumns) == 0: errors.append('no valid grouping column present.')
if remarks != []: damask.util.croak(remarks)
if errors != []:
damask.util.croak(errors)
table.close(dismiss=True)
continue
else:
grpColumn = table.label_index(options.label)
# ------------------------------------------ assemble info ---------------------------------------
@ -108,10 +117,9 @@ for name in filenames:
indexrange = table.label_indexrange(options.periodic) if options.periodic is not None else []
rows,cols = table.data.shape
table.data = table.data[np.lexsort([table.data[:,grpColumn]])] # sort data by grpColumn
values,index = np.unique(table.data[:,grpColumn], return_index = True) # unique grpColumn values and their positions
index = np.append(index,rows) # add termination position
table.data = table.data[np.lexsort(table.data[:,grpColumns].T)] # sort data by grpColumn(s)
values,index = np.unique(table.data[:,grpColumns], axis=0, return_index=True) # unique grpColumn values and their positions
index = sorted(np.append(index,rows)) # add termination position
grpTable = np.empty((len(values), cols)) # initialize output
for i in range(len(values)): # iterate over groups (unique values in grpColumn)
@ -119,7 +127,7 @@ for name in filenames:
grpTable[i,indexrange] = \
periodicAverage(table.data[index[i]:index[i+1],indexrange],options.boundary) # apply periodicAverage mapping function
if not options.all: grpTable[i,grpColumn] = table.data[index[i],grpColumn] # restore grouping column value
if not options.all: grpTable[i,grpColumns] = table.data[index[i],grpColumns] # restore grouping column value
table.data = grpTable

135
processing/post/postResults.py
View File

@ -121,12 +121,8 @@ class MPIEspectral_result: # mimic py_post result object
self._logscales = self._keyedPackedArray('logscales',count=self.N_loadcases,type='i')
self.size = self._keyedPackedArray('size:',count=3,type='d')
if self.size == [None,None,None]: # no 'size' found, try legacy alias 'dimension'
self.size = self._keyedPackedArray('dimension',count=3,type='d')
self.grid = self._keyedPackedArray('grid:',count=3,type='i')
if self.grid == [None,None,None]: # no 'grid' found, try legacy alias 'resolution'
self.grid = self._keyedPackedArray('resolution',count=3,type='i')
self.N_nodes = (self.grid[0]+1)*(self.grid[1]+1)*(self.grid[2]+1)
self.N_elements = self.grid[0] * self.grid[1] * self.grid[2]
@ -142,13 +138,8 @@ class MPIEspectral_result: # mimic py_post result object
# parameters for file handling depending on output format
if options.legacy:
self.tagLen=8
self.fourByteLimit = 2**31 -1 -8
else:
self.tagLen=0
self.tagLen=0
self.expectedFileSize = self.dataOffset+self.N_increments*(self.tagLen+self.N_elements*self.N_element_scalars*8)
if options.legacy: self.expectedFileSize+=self.expectedFileSize//self.fourByteLimit*8 # add extra 8 bytes for additional headers at 4 GB limits
if self.expectedFileSize != self.filesize:
print('\n**\n* Unexpected file size. Incomplete simulation or file corrupted!\n**')
@ -280,42 +271,16 @@ class MPIEspectral_result: # mimic py_post result object
return self.N_element_scalars
def element_scalar(self,e,idx):
if not options.legacy:
incStart = self.dataOffset \
+ self.position*8*self.N_elements*self.N_element_scalars
where = (e*self.N_element_scalars + idx)*8
try:
self.file.seek(incStart+where)
value = struct.unpack('d',self.file.read(8))[0]
except:
print('seeking {}'.format(incStart+where))
print('e {} idx {}'.format(e,idx))
sys.exit(1)
else:
self.fourByteLimit = 2**31 -1 -8
# header & footer + extra header and footer for 4 byte int range (Fortran)
# values
incStart = self.dataOffset \
+ self.position*8*( 1 + self.N_elements*self.N_element_scalars*8//self.fourByteLimit \
+ self.N_elements*self.N_element_scalars)
where = (e*self.N_element_scalars + idx)*8
try:
if where%self.fourByteLimit + 8 >= self.fourByteLimit: # danger of reading into fortran record footer at 4 byte limit
data=''
for i in range(8):
self.file.seek(incStart+where+(where//self.fourByteLimit)*8+4)
data += self.file.read(1)
where += 1
value = struct.unpack('d',data)[0]
else:
self.file.seek(incStart+where+(where//self.fourByteLimit)*8+4)
value = struct.unpack('d',self.file.read(8))[0]
except:
print('seeking {}'.format(incStart+where+(where//self.fourByteLimit)*8+4))
print('e {} idx {}'.format(e,idx))
sys.exit(1)
incStart = self.dataOffset \
+ self.position*8*self.N_elements*self.N_element_scalars
where = (e*self.N_element_scalars + idx)*8
try:
self.file.seek(incStart+where)
value = struct.unpack('d',self.file.read(8))[0]
except:
print('seeking {}'.format(incStart+where))
print('e {} idx {}'.format(e,idx))
sys.exit(1)
return [elemental_scalar(node,value) for node in self.element(e).items]
@ -645,8 +610,6 @@ of already processed data points for evaluation.
parser.add_option('-i','--info', action='store_true', dest='info',
help='list contents of resultfile')
parser.add_option('-l','--legacy', action='store_true', dest='legacy',
help='data format of spectral solver is in legacy format (no MPI out)')
parser.add_option('-n','--nodal', action='store_true', dest='nodal',
help='data is extrapolated to nodal value')
parser.add_option( '--prefix', dest='prefix',
@ -673,10 +636,7 @@ parser.add_option('-p','--type', dest='filetype',
help = 'type of result file [auto]')
parser.add_option('-q','--quiet', dest='verbose',
action = 'store_false',
help = 'suppress verbose output')
parser.add_option('--verbose', dest='verbose',
action = 'store_true',
help = 'enable verbose output')
help = 'hide status bar (useful when piping to file)')
group_material = OptionGroup(parser,'Material identifier')
@ -718,9 +678,8 @@ parser.add_option_group(group_general)
parser.add_option_group(group_special)
parser.set_defaults(info = False,
verbose = False,
legacy = False,
nodal = False,
verbose = True,
prefix = '',
suffix = '',
dir = 'postProc',
@ -747,6 +706,8 @@ if files == []:
parser.print_help()
parser.error('no file specified...')
damask.util.report(scriptName,files[0])
if not os.path.exists(files[0]):
parser.print_help()
parser.error('invalid file "%s" specified...'%files[0])
@ -803,12 +764,6 @@ if not options.constitutiveResult: options.constitutiveResult = []
options.sort.reverse()
options.sep.reverse()
# --- start background messaging
if options.verbose:
bg = damask.util.backgroundMessage()
bg.start()
# --- parse .output and .t16 files
if os.path.splitext(files[0])[1] == '':
@ -825,18 +780,13 @@ me = {
'Constitutive': options.phase,
}
if options.verbose: bg.set_message('parsing .output files...')
for what in me:
outputFormat[what] = ParseOutputFormat(filename, what, me[what])
if '_id' not in outputFormat[what]['specials']:
print("\nsection '{}' not found in <{}>".format(me[what], what))
print('\n'.join(map(lambda x:' [%s]'%x, outputFormat[what]['specials']['brothers'])))
if options.verbose: bg.set_message('opening result file...')
p = OpenPostfile(filename+extension,options.filetype,options.nodal)
if options.verbose: bg.set_message('parsing result file...')
stat = ParsePostfile(p, filename, outputFormat)
if options.filetype == 'marc':
stat['NumberOfIncrements'] -= 1 # t16 contains one "virtual" increment (at 0)
@ -879,8 +829,10 @@ if options.info:
# --- build connectivity maps
elementsOfNode = {}
for e in range(stat['NumberOfElements']):
if options.verbose and e%1000 == 0: bg.set_message('connect elem %i...'%e)
Nelems = stat['NumberOfElements']
for e in range(Nelems):
if options.verbose and Nelems >= 50 and e%(Nelems//50) == 0: # report in 2% steps if possible and avoid modulo by zero
damask.util.progressBar(iteration=e,total=Nelems,prefix='1/3: connecting elements')
for n in map(p.node_sequence,p.element(e).items):
if n not in elementsOfNode:
elementsOfNode[n] = [p.element_id(e)]
@ -899,10 +851,13 @@ index = {}
groups = []
groupCount = 0
memberCount = 0
damask.util.progressBar(iteration=1,total=1,prefix='1/3: connecting elements')
if options.nodalScalar:
for n in range(stat['NumberOfNodes']):
if options.verbose and n%1000 == 0: bg.set_message('scan node %i...'%n)
Npoints = stat['NumberOfNodes']
for n in range(Npoints):
if options.verbose and Npoints >= 50 and e%(Npoints//50) == 0: # report in 2% steps if possible and avoid modulo by zero
damask.util.progressBar(iteration=n,total=Npoints,prefix='2/3: scanning nodes ')
myNodeID = p.node_id(n)
myNodeCoordinates = [p.node(n).x, p.node(n).y, p.node(n).z]
myElemID = 0
@ -911,32 +866,35 @@ if options.nodalScalar:
# generate an expression that is only true for the locations specified by options.filter
filter = substituteLocation(options.filter, [myElemID,myNodeID,myIpID,myGrainID], myNodeCoordinates)
if filter != '' and not eval(filter): # for all filter expressions that are not true:...
continue # ... ignore this data point and continue with next
if filter != '' and not eval(filter): # for all filter expressions that are not true:...
continue # ... ignore this data point and continue with next
# --- group data locations
# generate a unique key for a group of separated data based on the separation criterium for the location
grp = substituteLocation('#'.join(options.sep), [myElemID,myNodeID,myIpID,myGrainID], myNodeCoordinates)
if grp not in index: # create a new group if not yet present
if grp not in index: # create a new group if not yet present
index[grp] = groupCount
groups.append([[0,0,0,0,0.0,0.0,0.0]]) # initialize with avg location
groups.append([[0,0,0,0,0.0,0.0,0.0]]) # initialize with avg location
groupCount += 1
groups[index[grp]][0][:4] = mapIncremental('','unique',
len(groups[index[grp]])-1,
groups[index[grp]][0][:4],
[myElemID,myNodeID,myIpID,myGrainID]) # keep only if unique average location
[myElemID,myNodeID,myIpID,myGrainID]) # keep only if unique average location
groups[index[grp]][0][4:] = mapIncremental('','avg',
len(groups[index[grp]])-1,
groups[index[grp]][0][4:],
myNodeCoordinates) # incrementally update average location
groups[index[grp]].append([myElemID,myNodeID,myIpID,myGrainID,0]) # append a new list defining each group member
myNodeCoordinates) # incrementally update average location
groups[index[grp]].append([myElemID,myNodeID,myIpID,myGrainID,0]) # append a new list defining each group member
memberCount += 1
damask.util.progressBar(iteration=1,total=1,prefix='2/3: scanning nodes ')
else:
for e in range(stat['NumberOfElements']):
if options.verbose and e%1000 == 0: bg.set_message('scan elem %i...'%e)
Nelems = stat['NumberOfElements']
for e in range(Nelems):
if options.verbose and Nelems >= 50 and e%(Nelems//50) == 0: # report in 2% steps if possible and avoid modulo by zero
damask.util.progressBar(iteration=e,total=Nelems,prefix='2/3: scanning elements ')
myElemID = p.element_id(e)
myIpCoordinates = ipCoords(p.element(e).type, list(map(lambda node: [node.x, node.y, node.z],
list(map(p.node, map(p.node_sequence, p.element(e).items))))))
@ -976,6 +934,7 @@ else:
myIpCoordinates[n]) # incrementally update average location
groups[index[grp]].append([myElemID,myNodeID,myIpID,myGrainID,n]) # append a new list defining each group member
memberCount += 1
damask.util.progressBar(iteration=1,total=1,prefix='2/3: scanning elements ')
# --------------------------- sort groups --------------------------------
@ -1002,7 +961,6 @@ if 'none' not in map(str.lower, options.sort):
theKeys.append('x[0][%i]'%where[criterium])
sortKeys = eval('lambda x:(%s)'%(','.join(theKeys)))
if options.verbose: bg.set_message('sorting groups...')
groups.sort(key = sortKeys) # in-place sorting to save mem
@ -1021,8 +979,6 @@ standard = ['inc'] + \
# --------------------------- loop over positions --------------------------------
if options.verbose: bg.set_message('getting map between positions and increments...')
incAtPosition = {}
positionOfInc = {}
@ -1048,8 +1004,8 @@ increments = [incAtPosition[x] for x in locations] # build list of increments to
time_start = time.time()
Nincs = len([i for i in locations])
for incCount,position in enumerate(locations): # walk through locations
p.moveto(position+offset_pos) # wind to correct position
# --------------------------- file management --------------------------------
@ -1075,16 +1031,14 @@ for incCount,position in enumerate(locations): # walk through locations
# --------------------------- read and map data per group --------------------------------
member = 0
for group in groups:
Ngroups = len(groups)
for j,group in enumerate(groups):
f = incCount*Ngroups + j
if options.verbose and (Ngroups*Nincs) >= 50 and f%((Ngroups*Nincs)//50) == 0: # report in 2% steps if possible and avoid modulo by zero
damask.util.progressBar(iteration=f,total=Ngroups*Nincs,prefix='3/3: processing points ')
N = 0 # group member counter
for (e,n,i,g,n_local) in group[1:]: # loop over group members
member += 1
if member%1000 == 0:
time_delta = ((len(locations)*memberCount)/float(member+incCount*memberCount)-1.0)*(time.time()-time_start)
if options.verbose: bg.set_message('(%02i:%02i:%02i) processing point %i of %i from increment %i (position %i)...'
%(time_delta//3600,time_delta%3600//60,time_delta%60,member,memberCount,increments[incCount],position))
newby = [] # current member's data
if options.nodalScalar:
@ -1133,7 +1087,7 @@ for incCount,position in enumerate(locations): # walk through locations
['Crystallite']*len(options.crystalliteResult) +
['Constitutive']*len(options.constitutiveResult)
):
outputIndex = (list(zip(*outputFormat[resultType]['outputs']))[0]).index(label) # find the position of this output in the outputFormat
outputIndex = (list(zip(*outputFormat[resultType]['outputs']))[0]).index(label) # find the position of this output in the outputFormat
length = int(outputFormat[resultType]['outputs'][outputIndex][1])
thisHead = heading('_',[[component,''.join( label.split() )] for component in range(int(length>1),length+int(length>1))])
if assembleHeader: header += thisHead
@ -1172,6 +1126,7 @@ for incCount,position in enumerate(locations): # walk through locations
group[0] + \
mappedResult)
)) + '\n')
damask.util.progressBar(iteration=1,total=1,prefix='3/3: processing points ')
if fileOpen:
file.close()

63
processing/post/rotateData.py
View File

@ -18,19 +18,15 @@ Rotate vector and/or tensor column data by given angle around given axis.
""", version = scriptID)
parser.add_option('-v','--vector',
dest = 'vector',
parser.add_option('-d', '--data',
dest = 'data',
action = 'extend', metavar = '<string LIST>',
help = 'column heading of vector(s) to rotate')
parser.add_option('-t','--tensor',
dest = 'tensor',
action = 'extend', metavar = '<string LIST>',
help = 'column heading of tensor(s) to rotate')
help = 'vector/tensor value(s) label(s)')
parser.add_option('-r', '--rotation',
dest = 'rotation',
type = 'float', nargs = 4, metavar = ' '.join(['float']*4),
help = 'angle and axis to rotate data [%default]')
parser.add_option('-d', '--degrees',
parser.add_option('--degrees',
dest = 'degrees',
action = 'store_true',
help = 'angles are given in degrees [%default]')
@ -41,7 +37,7 @@ parser.set_defaults(rotation = (0.,1.,1.,1.),
(options,filenames) = parser.parse_args()
if options.vector is None and options.tensor is None:
if options.data is None:
parser.error('no data column specified.')
toRadians = math.pi/180.0 if options.degrees else 1.0 # rescale degrees to radians
@ -59,27 +55,24 @@ for name in filenames:
except: continue
damask.util.report(scriptName,name)
# ------------------------------------------ read header ------------------------------------------
# --- interpret header ----------------------------------------------------------------------------
table.head_read()
# ------------------------------------------ sanity checks ----------------------------------------
items = {
'tensor': {'dim': 9, 'shape': [3,3], 'labels':options.tensor, 'active':[], 'column': []},
'vector': {'dim': 3, 'shape': [3], 'labels':options.vector, 'active':[], 'column': []},
}
errors = []
remarks = []
column = {}
active = {'vector':[],'tensor':[]}
for type, data in items.items():
for what in data['labels']:
dim = table.label_dimension(what)
if dim != data['dim']: remarks.append('column {} is not a {}.'.format(what,type))
else:
items[type]['active'].append(what)
items[type]['column'].append(table.label_index(what))
for i,dim in enumerate(table.label_dimension(options.data)):
label = options.data[i]
if dim == -1:
remarks.append('"{}" not found...'.format(label))
elif dim == 3:
remarks.append('adding vector "{}"...'.format(label))
active['vector'].append(label)
elif dim == 9:
remarks.append('adding tensor "{}"...'.format(label))
active['tensor'].append(label)
if remarks != []: damask.util.croak(remarks)
if errors != []:
@ -95,20 +88,14 @@ for name in filenames:
# ------------------------------------------ process data ------------------------------------------
outputAlive = True
while outputAlive and table.data_read(): # read next data line of ASCII table
datatype = 'vector'
for column in items[datatype]['column']: # loop over all requested labels
table.data[column:column+items[datatype]['dim']] = \
q * np.array(list(map(float,table.data[column:column+items[datatype]['dim']])))
datatype = 'tensor'
for column in items[datatype]['column']: # loop over all requested labels
table.data[column:column+items[datatype]['dim']] = \
np.dot(R,np.dot(np.array(list(map(float,table.data[column:column+items[datatype]['dim']]))).\
reshape(items[datatype]['shape']),R.transpose())).reshape(items[datatype]['dim'])
for v in active['vector']:
column = table.label_index(v)
table.data[column:column+3] = q * np.array(list(map(float,table.data[column:column+3])))
for t in active['tensor']:
column = table.label_index(t)
table.data[column:column+9] = \
np.dot(R,np.dot(np.array(list(map(float,table.data[column:column+9]))).reshape((3,3)),
R.transpose())).reshape((9))
outputAlive = table.data_write() # output processed line
# ------------------------------------------ output finalization -----------------------------------

9
processing/post/showTable.py → processing/post/viewTable.py
View File

@ -61,7 +61,14 @@ for name in filenames:
table = damask.ASCIItable(name = name,
buffered = False, labeled = options.labeled, readonly = True)
except: continue
damask.util.report(scriptName,name)
details = ', '.join(
(['header'] if options.table else []) +
(['info'] if options.head or options.info else []) +
(['labels'] if options.head or options.labels else []) +
(['data'] if options.data else []) +
[]
)
damask.util.report(scriptName,name + ('' if details == '' else ' -- '+details))
# ------------------------------------------ output head ---------------------------------------

5
processing/pre/geom_fromVoronoiTessellation.py
View File

@ -323,12 +323,13 @@ for name in filenames:
]
if hasEulers:
config_header += ['<texture>']
theAxes = [] if options.axes is None else ['axes\t{} {} {}'.format(*options.axes)]
for ID in grainIDs:
eulerID = np.nonzero(grains == ID)[0][0] # find first occurrence of this grain id
config_header += ['[Grain{}]'.format(str(ID).zfill(formatwidth)),
'(gauss)\tphi1 {:g}\tPhi {:g}\tphi2 {:g}\tscatter 0.0\tfraction 1.0'.format(*eulers[eulerID])
]
if options.axes is not None: config_header.append('axes\t{} {} {}'.format(*options.axes))
] + theAxes
config_header += ['<!skip>']
table.labels_clear()
table.info_clear()

2
processing/pre/geom_rotate.py
View File

@ -60,8 +60,6 @@ eulers = np.array(damask.orientation.Orientation(
degrees = options.degrees,
).asEulers(degrees=True))
damask.util.croak('{} {} {}'.format(*eulers))
# --- loop over input files -------------------------------------------------------------------------
if filenames == []: filenames = [None]

0
lib/damask/.gitignore → python/damask/.gitignore vendored
View File

2
lib/damask/__init__.py → python/damask/__init__.py
View File

@ -13,7 +13,7 @@ from .asciitable import ASCIItable # noqa
from .config import Material # noqa
from .colormaps import Colormap, Color # noqa
from .orientation import Quaternion, Rodrigues, Symmetry, Orientation # noqa
from .orientation import Quaternion, Symmetry, Orientation # noqa
#from .block import Block # only one class
from .result import Result # noqa

2
lib/damask/asciitable.py → python/damask/asciitable.py
View File

@ -494,7 +494,7 @@ class ASCIItable():
1)))
use = np.array(columns) if len(columns) > 0 else None
self.tags = list(np.array(self.tags)[use]) # update labels with valid subset
self.tags = list(np.array(self.__IO__['tags'])[use]) # update labels with valid subset
self.data = np.loadtxt(self.__IO__['in'],usecols=use,ndmin=2)
# self.data = np.genfromtxt(self.__IO__['in'],dtype=None,names=self.tags,usecols=use)

0
lib/damask/colormaps.py → python/damask/colormaps.py
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0
lib/damask/config/__init__.py → python/damask/config/__init__.py
View File

0
lib/damask/config/material.py → python/damask/config/material.py
View File

0
lib/damask/environment.py → python/damask/environment.py
View File

0
lib/damask/geometry/__init__.py → python/damask/geometry/__init__.py
View File

0
lib/damask/geometry/geometry.py → python/damask/geometry/geometry.py
View File

0
lib/damask/geometry/marc.py → python/damask/geometry/marc.py
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0
lib/damask/geometry/spectral.py → python/damask/geometry/spectral.py
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120
lib/damask/orientation.py → python/damask/orientation.py
View File

@ -7,24 +7,6 @@
import math,os
import numpy as np
# ******************************************************************************************
class Rodrigues:
def __init__(self, vector = np.zeros(3)):
self.vector = vector
def asQuaternion(self):
norm = np.linalg.norm(self.vector)
halfAngle = np.arctan(norm)
return Quaternion(np.cos(halfAngle),np.sin(halfAngle)*self.vector/norm)
def asAngleAxis(self):
norm = np.linalg.norm(self.vector)
halfAngle = np.arctan(norm)
return (2.0*halfAngle,self.vector/norm)
# ******************************************************************************************
class Quaternion:
u"""
@ -87,11 +69,11 @@ class Quaternion:
"""Multiplication"""
# Rowenhorst_etal2015 MSMSE: value of P is selected as -1
P = -1.0
try: # quaternion
try: # quaternion
return self.__class__(q=self.q*other.q - np.dot(self.p,other.p),
p=self.q*other.p + other.q*self.p + P * np.cross(self.p,other.p))
except: pass
try: # vector (perform passive rotation)
try: # vector (perform passive rotation)
( x, y, z) = self.p
(Vx,Vy,Vz) = other[0:3]
A = self.q*self.q - np.dot(self.p,self.p)
@ -104,7 +86,7 @@ class Quaternion:
A*Vz + B*z + C*(x*Vy - y*Vx),
])
except: pass
try: # scalar
try: # scalar
return self.__class__(q=self.q*other,
p=self.p*other)
except:
@ -114,7 +96,7 @@ class Quaternion:
"""In-place multiplication"""
# Rowenhorst_etal2015 MSMSE: value of P is selected as -1
P = -1.0
try: # Quaternion
try: # Quaternion
self.q = self.q*other.q - np.dot(self.p,other.p)
self.p = self.q*other.p + other.q*self.p + P * np.cross(self.p,other.p)
except: pass
@ -178,12 +160,13 @@ class Quaternion:
magnitude = __abs__
def __eq__(self,other):
"""Equal at e-8 precision"""
return (self-other).magnitude() < 1e-8 or (-self-other).magnitude() < 1e-8
"""Equal (sufficiently close) to each other"""
return np.isclose(( self-other).magnitude(),0.0) \
or np.isclose((-self-other).magnitude(),0.0)
def __ne__(self,other):
"""Not equal at e-8 precision"""
return not self.__eq__(self,other)
"""Not equal (sufficiently close) to each other"""
return not self.__eq__(other)
def __cmp__(self,other):
"""Linear ordering"""
@ -193,11 +176,6 @@ class Quaternion:
def magnitude_squared(self):
return self.q ** 2 + np.dot(self.p,self.p)
def identity(self):
self.q = 1.
self.p = np.zeros(3,dtype=float)
return self
def normalize(self):
d = self.magnitude()
if d > 0.0:
@ -209,13 +187,6 @@ class Quaternion:
self.p = -self.p
return self
def inverse(self):
d = self.magnitude()
if d > 0.0:
self.conjugate()
self /= d
return self
def homomorph(self):
if self.q < 0.0:
self.q = -self.q
@ -228,16 +199,13 @@ class Quaternion:
def conjugated(self):
return self.copy().conjugate()
def inversed(self):
return self.copy().inverse()
def homomorphed(self):
return self.copy().homomorph()
def asList(self):
return [self.q]+list(self.p)
def asM(self): # to find Averaging Quaternions (see F. Landis Markley et al.)
def asM(self): # to find Averaging Quaternions (see F. Landis Markley et al.)
return np.outer(self.asList(),self.asList())
def asMatrix(self):
@ -257,24 +225,26 @@ class Quaternion:
])
def asAngleAxis(self,
degrees = False):
if self.q > 1.:
self.normalize()
degrees = False,
flat = False):
s = math.sqrt(1. - self.q**2)
x = 2*self.q**2 - 1.
y = 2*self.q * s
angle = 2.0*math.acos(self.q)
angle = math.atan2(y,x)
if angle < 0.0:
angle *= -1.
s *= -1.
if np.isclose(angle,0.0):
angle = 0.0
axis = np.array([0.0,0.0,1.0])
elif np.isclose(self.q,0.0):
angle = math.pi
axis = self.p
else:
axis = np.sign(self.q)*self.p/np.linalg.norm(self.p)
return (np.degrees(angle) if degrees else angle,
np.array([1.0, 0.0, 0.0] if np.abs(angle) < 1e-6 else self.p / s))
angle = np.degrees(angle) if degrees else angle
return np.hstack((angle,axis)) if flat else (angle,axis)
def asRodrigues(self):
return np.inf*np.ones(3) if self.q == 0.0 else self.p/self.q
return np.inf*np.ones(3) if np.isclose(self.q,0.0) else self.p/self.q
def asEulers(self,
degrees = False):
@ -285,9 +255,9 @@ class Quaternion:
q12 = self.p[0]**2 + self.p[1]**2
chi = np.sqrt(q03*q12)
if abs(chi) < 1e-10 and abs(q12) < 1e-10:
if np.isclose(chi,0.0) and np.isclose(q12,0.0):
eulers = np.array([math.atan2(-2*P*self.q*self.p[2],self.q**2-self.p[2]**2),0,0])
elif abs(chi) < 1e-10 and abs(q03) < 1e-10:
elif np.isclose(chi,0.0) and np.isclose(q03,0.0):
eulers = np.array([math.atan2( 2 *self.p[0]*self.p[1],self.p[0]**2-self.p[1]**2),np.pi,0])
else:
eulers = np.array([math.atan2((self.p[0]*self.p[2]-P*self.q*self.p[1])/chi,(-P*self.q*self.p[0]-self.p[1]*self.p[2])/chi),
@ -295,6 +265,7 @@ class Quaternion:
math.atan2((P*self.q*self.p[1]+self.p[0]*self.p[2])/chi,( self.p[1]*self.p[2]-P*self.q*self.p[0])/chi),
])
eulers %= 2.0*math.pi # enforce positive angles
return np.degrees(eulers) if degrees else eulers
@ -311,10 +282,12 @@ class Quaternion:
randomSeed = int(binascii.hexlify(os.urandom(4)),16)
np.random.seed(randomSeed)
r = np.random.random(3)
w = math.cos(2.0*math.pi*r[0])*math.sqrt(r[2])
x = math.sin(2.0*math.pi*r[1])*math.sqrt(1.0-r[2])
y = math.cos(2.0*math.pi*r[1])*math.sqrt(1.0-r[2])
z = math.sin(2.0*math.pi*r[0])*math.sqrt(r[2])
A = math.sqrt(max(0.0,r[2]))
B = math.sqrt(max(0.0,1.0-r[2]))
w = math.cos(2.0*math.pi*r[0])*A
x = math.sin(2.0*math.pi*r[1])*B
y = math.cos(2.0*math.pi*r[1])*B
z = math.sin(2.0*math.pi*r[0])*A
return cls(quat=[w,x,y,z])
@ -372,10 +345,10 @@ class Quaternion:
# Rowenhorst_etal2015 MSMSE: value of P is selected as -1
P = -1.0
w = 0.5*math.sqrt(1.+m[0,0]+m[1,1]+m[2,2])
x = P*0.5*math.sqrt(1.+m[0,0]-m[1,1]-m[2,2])
y = P*0.5*math.sqrt(1.-m[0,0]+m[1,1]-m[2,2])
z = P*0.5*math.sqrt(1.-m[0,0]-m[1,1]+m[2,2])
w = 0.5*math.sqrt(max(0.0,1.0+m[0,0]+m[1,1]+m[2,2]))
x = P*0.5*math.sqrt(max(0.0,1.0+m[0,0]-m[1,1]-m[2,2]))
y = P*0.5*math.sqrt(max(0.0,1.0-m[0,0]+m[1,1]-m[2,2]))
z = P*0.5*math.sqrt(max(0.0,1.0-m[0,0]-m[1,1]+m[2,2]))
x *= -1 if m[2,1] < m[1,2] else 1
y *= -1 if m[0,2] < m[2,0] else 1
@ -443,16 +416,16 @@ class Symmetry:
def __repr__(self):
"""Readbable string"""
"""Readable string"""
return '{}'.format(self.lattice)
def __eq__(self, other):
"""Equal"""
"""Equal to other"""
return self.lattice == other.lattice
def __neq__(self, other):
"""Not equal"""
"""Not equal to other"""
return not self.__eq__(other)
def __cmp__(self,other):
@ -529,7 +502,7 @@ class Symmetry:
]
return list(map(Quaternion,
np.array(symQuats)[np.atleast_1d(np.array(who)) if who != [] else range(len(symQuats))]))
np.array(symQuats)[np.atleast_1d(np.array(who)) if who != [] else range(len(symQuats))]))
def equivalentQuaternions(self,
@ -541,7 +514,7 @@ class Symmetry:
def inFZ(self,R):
"""Check whether given Rodrigues vector falls into fundamental zone of own symmetry."""
if isinstance(R, Quaternion): R = R.asRodrigues() # translate accidentially passed quaternion
if isinstance(R, Quaternion): R = R.asRodrigues() # translate accidentally passed quaternion
# fundamental zone in Rodrigues space is point symmetric around origin
R = abs(R)
if self.lattice == 'cubic':
@ -668,7 +641,7 @@ class Symmetry:
if color: # have to return color array
if inSST:
rgb = np.power(theComponents/np.linalg.norm(theComponents),0.5) # smoothen color ramps
rgb = np.minimum(np.ones(3,dtype=float),rgb) # limit to maximum intensity
rgb = np.minimum(np.ones(3,dtype=float),rgb) # limit to maximum intensity
rgb /= max(rgb) # normalize to (HS)V = 1
else:
rgb = np.zeros(3,dtype=float)
@ -747,8 +720,9 @@ class Orientation:
rodrigues = property(asRodrigues)
def asAngleAxis(self,
degrees = False):
return self.quaternion.asAngleAxis(degrees)
degrees = False,
flat = False):
return self.quaternion.asAngleAxis(degrees,flat)
angleAxis = property(asAngleAxis)
def asMatrix(self):

0
lib/damask/result.py → python/damask/result.py
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0
lib/damask/result/marc2vtk.py → python/damask/result/marc2vtk.py
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0
lib/damask/solver/__init__.py → python/damask/solver/__init__.py
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0
lib/damask/solver/abaqus.py → python/damask/solver/abaqus.py
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0
lib/damask/solver/marc.py → python/damask/solver/marc.py
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0
lib/damask/solver/solver.py → python/damask/solver/solver.py
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0
lib/damask/solver/spectral.py → python/damask/solver/spectral.py
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0
lib/damask/test/__init__.py → python/damask/test/__init__.py
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0
lib/damask/test/test.py → python/damask/test/test.py
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37
lib/damask/util.py → python/damask/util.py
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@ -132,6 +132,43 @@ class extendableOption(Option):
else:
Option.take_action(self, action, dest, opt, value, values, parser)
# Print iterations progress
# from https://gist.github.com/aubricus/f91fb55dc6ba5557fbab06119420dd6a
def progressBar(iteration, total, prefix='', bar_length=50):
"""
Call in a loop to create terminal progress bar
@params:
iteration - Required : current iteration (Int)
total - Required : total iterations (Int)
prefix - Optional : prefix string (Str)
bar_length - Optional : character length of bar (Int)
"""
fraction = iteration / float(total)
if not hasattr(progressBar, "last_fraction"): # first call to function
progressBar.start_time = time.time()
progressBar.last_fraction = -1.0
remaining_time = ' n/a'
else:
if fraction <= progressBar.last_fraction or iteration == 0: # reset: called within a new loop
progressBar.start_time = time.time()
progressBar.last_fraction = -1.0
remaining_time = ' n/a'
else:
progressBar.last_fraction = fraction
remainder = (total - iteration) * (time.time()-progressBar.start_time)/iteration
remaining_time = '{: 3d}:'.format(int( remainder//3600)) + \
'{:02d}:'.format(int((remainder//60)%60)) + \
'{:02d}' .format(int( remainder %60))
filled_length = int(round(bar_length * fraction))
bar = '█' * filled_length + '░' * (bar_length - filled_length)
sys.stderr.write('\r{} {} {}'.format(prefix, bar, remaining_time)),
if iteration == total: sys.stderr.write('\n\n')
sys.stderr.flush()
# -----------------------------
class backgroundMessage(threading.Thread):
"""Reporting with animation to indicate progress"""

30
src/CMakeLists.txt
View File

@ -90,9 +90,7 @@ list(APPEND OBJECTFILES $<TARGET_OBJECTS:PLASTIC>)
add_library (KINEMATICS OBJECT
"kinematics_cleavage_opening.f90"
"kinematics_slipplane_opening.f90"
"kinematics_thermal_expansion.f90"
"kinematics_vacancy_strain.f90"
"kinematics_hydrogen_strain.f90")
"kinematics_thermal_expansion.f90")
add_dependencies(KINEMATICS DAMASK_HELPERS)
list(APPEND OBJECTFILES $<TARGET_OBJECTS:KINEMATICS>)
@ -102,10 +100,7 @@ add_library (SOURCE OBJECT
"source_damage_isoBrittle.f90"
"source_damage_isoDuctile.f90"
"source_damage_anisoBrittle.f90"
"source_damage_anisoDuctile.f90"
"source_vacancy_phenoplasticity.f90"
"source_vacancy_irradiation.f90"
"source_vacancy_thermalfluc.f90")
"source_damage_anisoDuctile.f90")
add_dependencies(SOURCE DAMASK_HELPERS)
list(APPEND OBJECTFILES $<TARGET_OBJECTS:SOURCE>)
@ -124,25 +119,6 @@ add_library(HOMOGENIZATION OBJECT
add_dependencies(HOMOGENIZATION CRYSTALLITE)
list(APPEND OBJECTFILES $<TARGET_OBJECTS:HOMOGENIZATION>)
add_library(HYDROGENFLUX OBJECT
"hydrogenflux_isoconc.f90"
"hydrogenflux_cahnhilliard.f90")
add_dependencies(HYDROGENFLUX CRYSTALLITE)
list(APPEND OBJECTFILES $<TARGET_OBJECTS:HYDROGENFLUX>)
add_library(POROSITY OBJECT
"porosity_none.f90"
"porosity_phasefield.f90")
add_dependencies(POROSITY CRYSTALLITE)
list(APPEND OBJECTFILES $<TARGET_OBJECTS:POROSITY>)
add_library(VACANCYFLUX OBJECT
"vacancyflux_isoconc.f90"
"vacancyflux_isochempot.f90"
"vacancyflux_cahnhilliard.f90")
add_dependencies(VACANCYFLUX CRYSTALLITE)
list(APPEND OBJECTFILES $<TARGET_OBJECTS:VACANCYFLUX>)
add_library(DAMAGE OBJECT
"damage_none.f90"
"damage_local.f90"
@ -158,7 +134,7 @@ add_dependencies(THERMAL CRYSTALLITE)
list(APPEND OBJECTFILES $<TARGET_OBJECTS:THERMAL>)
add_library(DAMASK_ENGINE OBJECT "homogenization.f90")
add_dependencies(DAMASK_ENGINE THERMAL DAMAGE VACANCYFLUX POROSITY HYDROGENFLUX HOMOGENIZATION)
add_dependencies(DAMASK_ENGINE THERMAL DAMAGE HOMOGENIZATION)
list(APPEND OBJECTFILES $<TARGET_OBJECTS:DAMASK_ENGINE>)
add_library(DAMASK_CPFE OBJECT "CPFEM2.f90")

4
src/CPFEM.f90
View File

@ -304,8 +304,6 @@ subroutine CPFEM_general(mode, parallelExecution, ffn, ffn1, temperature_inp, dt
homogState, &
thermalState, &
damageState, &
vacancyfluxState, &
hydrogenfluxState, &
phaseAt, phasememberAt, &
material_phase, &
phase_plasticity, &
@ -421,8 +419,6 @@ subroutine CPFEM_general(mode, parallelExecution, ffn, ffn1, temperature_inp, dt
homogState (homog)%state0 = homogState (homog)%state
thermalState (homog)%state0 = thermalState (homog)%state
damageState (homog)%state0 = damageState (homog)%state
vacancyfluxState (homog)%state0 = vacancyfluxState (homog)%state
hydrogenfluxState(homog)%state0 = hydrogenfluxState(homog)%state
enddo

4
src/CPFEM2.f90
View File

@ -203,8 +203,6 @@ subroutine CPFEM_age()
homogState, &
thermalState, &
damageState, &
vacancyfluxState, &
hydrogenfluxState, &
material_phase, &
phase_plasticity, &
phase_Nsources
@ -268,8 +266,6 @@ if (iand(debug_level(debug_CPFEM), debug_levelBasic) /= 0_pInt) &
homogState (homog)%state0 = homogState (homog)%state
thermalState (homog)%state0 = thermalState (homog)%state
damageState (homog)%state0 = damageState (homog)%state
vacancyfluxState (homog)%state0 = vacancyfluxState (homog)%state
hydrogenfluxState(homog)%state0 = hydrogenfluxState(homog)%state
enddo
if (restartWrite) then

2
src/IO.f90
View File

@ -1251,6 +1251,8 @@ subroutine IO_error(error_ID,el,ip,g,instance,ext_msg)
msg = 'negative number systems requested'
case (145_pInt)
msg = 'too many systems requested'
case (146_pInt)
msg = 'number of values does not match'
!--------------------------------------------------------------------------------------------------
! material error messages and related messages in mesh

12
src/commercialFEM_fileList.f90
View File

@ -21,14 +21,9 @@
#include "source_damage_isoDuctile.f90"
#include "source_damage_anisoBrittle.f90"
#include "source_damage_anisoDuctile.f90"
#include "source_vacancy_phenoplasticity.f90"
#include "source_vacancy_irradiation.f90"
#include "source_vacancy_thermalfluc.f90"
#include "kinematics_cleavage_opening.f90"
#include "kinematics_slipplane_opening.f90"
#include "kinematics_thermal_expansion.f90"
#include "kinematics_vacancy_strain.f90"
#include "kinematics_hydrogen_strain.f90"
#include "plastic_none.f90"
#include "plastic_isotropic.f90"
#include "plastic_phenopowerlaw.f90"
@ -47,12 +42,5 @@
#include "damage_none.f90"
#include "damage_local.f90"
#include "damage_nonlocal.f90"
#include "vacancyflux_isoconc.f90"
#include "vacancyflux_isochempot.f90"
#include "vacancyflux_cahnhilliard.f90"
#include "porosity_none.f90"
#include "porosity_phasefield.f90"
#include "hydrogenflux_isoconc.f90"
#include "hydrogenflux_cahnhilliard.f90"
#include "homogenization.f90"
#include "CPFEM.f90"

22
src/config.f90
View File

@ -142,7 +142,7 @@ subroutine config_init()
case (trim(material_partPhase))
call parseFile(phase_name,config_phase,line,fileContent(i+1:))
if (iand(myDebug,debug_levelBasic) /= 0_pInt) write(6,'(a)') ' Phase parsed'; flush(6)
if (iand(myDebug,debug_levelBasic) /= 0_pInt) write(6,'(a)') ' Phase parsed'; flush(6)
case (trim(material_partMicrostructure))
call parseFile(microstructure_name,config_microstructure,line,fileContent(i+1:))
@ -150,7 +150,7 @@ subroutine config_init()
case (trim(material_partCrystallite))
call parseFile(crystallite_name,config_crystallite,line,fileContent(i+1:))
if (iand(myDebug,debug_levelBasic) /= 0_pInt) write(6,'(a)') ' Crystallite parsed'; flush(6)
if (iand(myDebug,debug_levelBasic) /= 0_pInt) write(6,'(a)') ' Crystallite parsed'; flush(6)
case (trim(material_partHomogenization))
call parseFile(homogenization_name,config_homogenization,line,fileContent(i+1:))
@ -158,7 +158,7 @@ subroutine config_init()
case (trim(material_partTexture))
call parseFile(texture_name,config_texture,line,fileContent(i+1:))
if (iand(myDebug,debug_levelBasic) /= 0_pInt) write(6,'(a)') ' Texture parsed'; flush(6)
if (iand(myDebug,debug_levelBasic) /= 0_pInt) write(6,'(a)') ' Texture parsed'; flush(6)
end select
@ -550,7 +550,7 @@ end function getString
!> @details for cumulative keys, "()", values from all occurrences are return. Otherwise only all
!! values from the last occurrence. If key is not found exits with error unless default is given.
!--------------------------------------------------------------------------------------------------
function getFloats(this,key,defaultVal,requiredShape)
function getFloats(this,key,defaultVal,requiredShape,requiredSize)
use IO, only: &
IO_error, &
IO_stringValue, &
@ -561,7 +561,8 @@ function getFloats(this,key,defaultVal,requiredShape)
class(tPartitionedStringList), target, intent(in) :: this
character(len=*), intent(in) :: key
real(pReal), dimension(:), intent(in), optional :: defaultVal
integer(pInt), dimension(:), intent(in), optional :: requiredShape
integer(pInt), dimension(:), intent(in), optional :: requiredShape ! not useful (is always 1D array)
integer(pInt), intent(in), optional :: requiredSize
type(tPartitionedStringList), pointer :: item
integer(pInt) :: i
logical :: found, &
@ -588,6 +589,9 @@ function getFloats(this,key,defaultVal,requiredShape)
if (.not. found) then
if (present(defaultVal)) then; getFloats = defaultVal; else; call IO_error(140_pInt,ext_msg=key); endif
endif
if (present(requiredSize)) then
if(requiredSize /= size(getFloats)) call IO_error(146,ext_msg=key)
endif
end function getFloats
@ -597,7 +601,7 @@ end function getFloats
!> @details for cumulative keys, "()", values from all occurrences are return. Otherwise only all
!! values from the last occurrence. If key is not found exits with error unless default is given.
!--------------------------------------------------------------------------------------------------
function getInts(this,key,defaultVal,requiredShape)
function getInts(this,key,defaultVal,requiredShape,requiredSize)
use IO, only: &
IO_error, &
IO_stringValue, &
@ -608,7 +612,8 @@ function getInts(this,key,defaultVal,requiredShape)
class(tPartitionedStringList), target, intent(in) :: this
character(len=*), intent(in) :: key
integer(pInt), dimension(:), intent(in), optional :: defaultVal, &
requiredShape
requiredShape ! not useful (is always 1D array)
integer(pInt), intent(in), optional :: requiredSize
type(tPartitionedStringList), pointer :: item
integer(pInt) :: i
logical :: found, &
@ -635,6 +640,9 @@ function getInts(this,key,defaultVal,requiredShape)
if (.not. found) then
if (present(defaultVal)) then; getInts = defaultVal; else; call IO_error(140_pInt,ext_msg=key); endif
endif
if (present(requiredSize)) then
if(requiredSize /= size(getInts)) call IO_error(146,ext_msg=key)
endif
end function getInts

147
src/constitutive.f90
View File

@ -88,14 +88,9 @@ subroutine constitutive_init()
SOURCE_damage_isoDuctile_ID, &
SOURCE_damage_anisoBrittle_ID, &
SOURCE_damage_anisoDuctile_ID, &
SOURCE_vacancy_phenoplasticity_ID, &
SOURCE_vacancy_irradiation_ID, &
SOURCE_vacancy_thermalfluc_ID, &
KINEMATICS_cleavage_opening_ID, &
KINEMATICS_slipplane_opening_ID, &
KINEMATICS_thermal_expansion_ID, &
KINEMATICS_vacancy_strain_ID, &
KINEMATICS_hydrogen_strain_ID, &
ELASTICITY_HOOKE_label, &
PLASTICITY_NONE_label, &
PLASTICITY_ISOTROPIC_label, &
@ -110,9 +105,6 @@ subroutine constitutive_init()
SOURCE_damage_isoDuctile_label, &
SOURCE_damage_anisoBrittle_label, &
SOURCE_damage_anisoDuctile_label, &
SOURCE_vacancy_phenoplasticity_label, &
SOURCE_vacancy_irradiation_label, &
SOURCE_vacancy_thermalfluc_label, &
plasticState, &
sourceState
@ -129,14 +121,9 @@ subroutine constitutive_init()
use source_damage_isoDuctile
use source_damage_anisoBrittle
use source_damage_anisoDuctile
use source_vacancy_phenoplasticity
use source_vacancy_irradiation
use source_vacancy_thermalfluc
use kinematics_cleavage_opening
use kinematics_slipplane_opening
use kinematics_thermal_expansion
use kinematics_vacancy_strain
use kinematics_hydrogen_strain
implicit none
integer(pInt), parameter :: FILEUNIT = 204_pInt
@ -164,7 +151,7 @@ subroutine constitutive_init()
if (any(phase_plasticity == PLASTICITY_PHENOPOWERLAW_ID)) call plastic_phenopowerlaw_init
if (any(phase_plasticity == PLASTICITY_KINEHARDENING_ID)) call plastic_kinehardening_init
if (any(phase_plasticity == PLASTICITY_DISLOTWIN_ID)) call plastic_dislotwin_init(FILEUNIT)
if (any(phase_plasticity == PLASTICITY_DISLOUCLA_ID)) call plastic_disloucla_init(FILEUNIT)
if (any(phase_plasticity == PLASTICITY_DISLOUCLA_ID)) call plastic_disloucla_init
if (any(phase_plasticity == PLASTICITY_NONLOCAL_ID)) then
call plastic_nonlocal_init(FILEUNIT)
call plastic_nonlocal_stateInit()
@ -179,9 +166,6 @@ subroutine constitutive_init()
if (any(phase_source == SOURCE_damage_isoDuctile_ID)) call source_damage_isoDuctile_init(FILEUNIT)
if (any(phase_source == SOURCE_damage_anisoBrittle_ID)) call source_damage_anisoBrittle_init(FILEUNIT)
if (any(phase_source == SOURCE_damage_anisoDuctile_ID)) call source_damage_anisoDuctile_init(FILEUNIT)
if (any(phase_source == SOURCE_vacancy_phenoplasticity_ID)) call source_vacancy_phenoplasticity_init(FILEUNIT)
if (any(phase_source == SOURCE_vacancy_irradiation_ID)) call source_vacancy_irradiation_init(FILEUNIT)
if (any(phase_source == SOURCE_vacancy_thermalfluc_ID)) call source_vacancy_thermalfluc_init(FILEUNIT)
!--------------------------------------------------------------------------------------------------
! parse kinematic mechanisms from config file
@ -189,8 +173,6 @@ subroutine constitutive_init()
if (any(phase_kinematics == KINEMATICS_cleavage_opening_ID)) call kinematics_cleavage_opening_init(FILEUNIT)
if (any(phase_kinematics == KINEMATICS_slipplane_opening_ID)) call kinematics_slipplane_opening_init(FILEUNIT)
if (any(phase_kinematics == KINEMATICS_thermal_expansion_ID)) call kinematics_thermal_expansion_init(FILEUNIT)
if (any(phase_kinematics == KINEMATICS_vacancy_strain_ID)) call kinematics_vacancy_strain_init(FILEUNIT)
if (any(phase_kinematics == KINEMATICS_hydrogen_strain_ID)) call kinematics_hydrogen_strain_init(FILEUNIT)
close(FILEUNIT)
call config_deallocate('material.config/phase')
@ -283,21 +265,6 @@ subroutine constitutive_init()
outputName = SOURCE_damage_anisoDuctile_label
thisOutput => source_damage_anisoDuctile_output
thisSize => source_damage_anisoDuctile_sizePostResult
case (SOURCE_vacancy_phenoplasticity_ID) sourceType
ins = source_vacancy_phenoplasticity_instance(ph)
outputName = SOURCE_vacancy_phenoplasticity_label
thisOutput => source_vacancy_phenoplasticity_output
thisSize => source_vacancy_phenoplasticity_sizePostResult
case (SOURCE_vacancy_irradiation_ID) sourceType
ins = source_vacancy_irradiation_instance(ph)
outputName = SOURCE_vacancy_irradiation_label
thisOutput => source_vacancy_irradiation_output
thisSize => source_vacancy_irradiation_sizePostResult
case (SOURCE_vacancy_thermalfluc_ID) sourceType
ins = source_vacancy_thermalfluc_instance(ph)
outputName = SOURCE_vacancy_thermalfluc_label
thisOutput => source_vacancy_thermalfluc_output
thisSize => source_vacancy_thermalfluc_sizePostResult
case default sourceType
knownSource = .false.
end select sourceType
@ -384,7 +351,9 @@ subroutine constitutive_microstructure(orientations, Fe, Fp, ipc, ip, el)
use prec, only: &
pReal
use material, only: &
phasememberAt, &
phase_plasticity, &
phase_plasticityInstance, &
material_phase, &
material_homogenizationAt, &
temperature, &
@ -396,8 +365,8 @@ subroutine constitutive_microstructure(orientations, Fe, Fp, ipc, ip, el)
plastic_nonlocal_microstructure
use plastic_dislotwin, only: &
plastic_dislotwin_microstructure
use plastic_disloucla, only: &
plastic_disloucla_microstructure
use plastic_disloUCLA, only: &
plastic_disloUCLA_dependentState
implicit none
integer(pInt), intent(in) :: &
@ -409,7 +378,8 @@ subroutine constitutive_microstructure(orientations, Fe, Fp, ipc, ip, el)
Fp !< plastic deformation gradient
integer(pInt) :: &
ho, & !< homogenization
tme !< thermal member position
tme, & !< thermal member position
instance, of
real(pReal), intent(in), dimension(:,:,:,:) :: &
orientations !< crystal orientations as quaternions
@ -420,7 +390,9 @@ subroutine constitutive_microstructure(orientations, Fe, Fp, ipc, ip, el)
case (PLASTICITY_DISLOTWIN_ID) plasticityType
call plastic_dislotwin_microstructure(temperature(ho)%p(tme),ipc,ip,el)
case (PLASTICITY_DISLOUCLA_ID) plasticityType
call plastic_disloucla_microstructure(temperature(ho)%p(tme),ipc,ip,el)
of = phasememberAt(ipc,ip,el)
instance = phase_plasticityInstance(material_phase(ipc,ip,el))
call plastic_disloUCLA_dependentState(instance,of)
case (PLASTICITY_NONLOCAL_ID) plasticityType
call plastic_nonlocal_microstructure (Fe,Fp,ip,el)
end select plasticityType
@ -507,8 +479,9 @@ subroutine constitutive_LpAndItsTangents(Lp, dLp_dS, dLp_dFi, S6, Fi, ipc, ip, e
dLp_dMp = 0.0_pReal
case (PLASTICITY_ISOTROPIC_ID) plasticityType
call plastic_isotropic_LpAndItsTangent (Lp,dLp_dMp99, math_Mandel33to6(Mp),ipc,ip,el)
dLp_dMp = math_Plain99to3333(dLp_dMp99) ! ToDo: We revert here the last statement in plastic_xx_LpAndItsTanget
of = phasememberAt(ipc,ip,el)
instance = phase_plasticityInstance(material_phase(ipc,ip,el))
call plastic_isotropic_LpAndItsTangent (Lp,dLp_dMp,Mp,instance,of)
case (PLASTICITY_PHENOPOWERLAW_ID) plasticityType
of = phasememberAt(ipc,ip,el)
@ -531,9 +504,9 @@ subroutine constitutive_LpAndItsTangents(Lp, dLp_dS, dLp_dFi, S6, Fi, ipc, ip, e
call plastic_dislotwin_LpAndItsTangent (Lp,dLp_dMp,Mp,temperature(ho)%p(tme),instance,of)
case (PLASTICITY_DISLOUCLA_ID) plasticityType
call plastic_disloucla_LpAndItsTangent (Lp,dLp_dMp99, math_Mandel33to6(Mp), &
temperature(ho)%p(tme), ipc,ip,el)
dLp_dMp = math_Plain99to3333(dLp_dMp99) ! ToDo: We revert here the last statement in plastic_xx_LpAndItsTanget
of = phasememberAt(ipc,ip,el)
instance = phase_plasticityInstance(material_phase(ipc,ip,el))
call plastic_disloucla_LpAndItsTangent (Lp,dLp_dMp,Mp,temperature(ho)%p(tme),instance,of)
end select plasticityType
@ -556,6 +529,7 @@ end subroutine constitutive_LpAndItsTangents
!--------------------------------------------------------------------------------------------------
!> @brief contains the constitutive equation for calculating the velocity gradient
! ToDo: MD: S is Mi?
!--------------------------------------------------------------------------------------------------
subroutine constitutive_LiAndItsTangents(Li, dLi_dS, dLi_dFi, S6, Fi, ipc, ip, el)
use prec, only: &
@ -564,8 +538,12 @@ subroutine constitutive_LiAndItsTangents(Li, dLi_dS, dLi_dFi, S6, Fi, ipc, ip, e
math_I3, &
math_inv33, &
math_det33, &
math_mul33x33
math_mul33x33, &
math_Mandel6to33
use material, only: &
phasememberAt, &
phase_plasticity, &
phase_plasticityInstance, &
phase_plasticity, &
material_phase, &
phase_kinematics, &
@ -573,9 +551,7 @@ subroutine constitutive_LiAndItsTangents(Li, dLi_dS, dLi_dFi, S6, Fi, ipc, ip, e
PLASTICITY_isotropic_ID, &
KINEMATICS_cleavage_opening_ID, &
KINEMATICS_slipplane_opening_ID, &
KINEMATICS_thermal_expansion_ID, &
KINEMATICS_vacancy_strain_ID, &
KINEMATICS_hydrogen_strain_ID
KINEMATICS_thermal_expansion_ID
use plastic_isotropic, only: &
plastic_isotropic_LiAndItsTangent
use kinematics_cleavage_opening, only: &
@ -584,10 +560,6 @@ subroutine constitutive_LiAndItsTangents(Li, dLi_dS, dLi_dFi, S6, Fi, ipc, ip, e
kinematics_slipplane_opening_LiAndItsTangent
use kinematics_thermal_expansion, only: &
kinematics_thermal_expansion_LiAndItsTangent
use kinematics_vacancy_strain, only: &
kinematics_vacancy_strain_LiAndItsTangent
use kinematics_hydrogen_strain, only: &
kinematics_hydrogen_strain_LiAndItsTangent
implicit none
integer(pInt), intent(in) :: &
@ -603,19 +575,18 @@ subroutine constitutive_LiAndItsTangents(Li, dLi_dS, dLi_dFi, S6, Fi, ipc, ip, e
real(pReal), intent(out), dimension(3,3,3,3) :: &
dLi_dS, & !< derivative of Li with respect to S
dLi_dFi
real(pReal), dimension(3,3) :: &
my_Li !< intermediate velocity gradient
real(pReal), dimension(3,3,3,3) :: &
my_dLi_dS
real(pReal), dimension(3,3) :: &
my_Li, & !< intermediate velocity gradient
FiInv, &
temp_33
real(pReal), dimension(3,3,3,3) :: &
my_dLi_dS
real(pReal) :: &
detFi
integer(pInt) :: &
k !< counter in kinematics loop
integer(pInt) :: &
i, j
k, i, j, &
instance, of
Li = 0.0_pReal
dLi_dS = 0.0_pReal
@ -623,7 +594,9 @@ subroutine constitutive_LiAndItsTangents(Li, dLi_dS, dLi_dFi, S6, Fi, ipc, ip, e
plasticityType: select case (phase_plasticity(material_phase(ipc,ip,el)))
case (PLASTICITY_isotropic_ID) plasticityType
call plastic_isotropic_LiAndItsTangent(my_Li, my_dLi_dS, S6, ipc, ip, el)
of = phasememberAt(ipc,ip,el)
instance = phase_plasticityInstance(material_phase(ipc,ip,el))
call plastic_isotropic_LiAndItsTangent(my_Li, my_dLi_dS, math_Mandel6to33(S6),instance,of)
case default plasticityType
my_Li = 0.0_pReal
my_dLi_dS = 0.0_pReal
@ -640,10 +613,6 @@ subroutine constitutive_LiAndItsTangents(Li, dLi_dS, dLi_dFi, S6, Fi, ipc, ip, e
call kinematics_slipplane_opening_LiAndItsTangent(my_Li, my_dLi_dS, S6, ipc, ip, el)
case (KINEMATICS_thermal_expansion_ID) kinematicsType
call kinematics_thermal_expansion_LiAndItsTangent(my_Li, my_dLi_dS, ipc, ip, el)
case (KINEMATICS_vacancy_strain_ID) kinematicsType
call kinematics_vacancy_strain_LiAndItsTangent(my_Li, my_dLi_dS, ipc, ip, el)
case (KINEMATICS_hydrogen_strain_ID) kinematicsType
call kinematics_hydrogen_strain_LiAndItsTangent(my_Li, my_dLi_dS, ipc, ip, el)
case default kinematicsType
my_Li = 0.0_pReal
my_dLi_dS = 0.0_pReal
@ -680,15 +649,9 @@ pure function constitutive_initialFi(ipc, ip, el)
phase_kinematics, &
phase_Nkinematics, &
material_phase, &
KINEMATICS_thermal_expansion_ID, &
KINEMATICS_vacancy_strain_ID, &
KINEMATICS_hydrogen_strain_ID
KINEMATICS_thermal_expansion_ID
use kinematics_thermal_expansion, only: &
kinematics_thermal_expansion_initialStrain
use kinematics_vacancy_strain, only: &
kinematics_vacancy_strain_initialStrain
use kinematics_hydrogen_strain, only: &
kinematics_hydrogen_strain_initialStrain
implicit none
integer(pInt), intent(in) :: &
@ -707,12 +670,6 @@ pure function constitutive_initialFi(ipc, ip, el)
case (KINEMATICS_thermal_expansion_ID) kinematicsType
constitutive_initialFi = &
constitutive_initialFi + kinematics_thermal_expansion_initialStrain(ipc, ip, el)
case (KINEMATICS_vacancy_strain_ID) kinematicsType
constitutive_initialFi = &
constitutive_initialFi + kinematics_vacancy_strain_initialStrain(ipc, ip, el)
case (KINEMATICS_hydrogen_strain_ID) kinematicsType
constitutive_initialFi = &
constitutive_initialFi + kinematics_hydrogen_strain_initialStrain(ipc, ip, el)
end select kinematicsType
enddo KinematicsLoop
@ -767,10 +724,7 @@ subroutine constitutive_hooke_SandItsTangents(S, dS_dFe, dS_dFi, Fe, Fi, ipc, ip
phase_stiffnessDegradation, &
damage, &
damageMapping, &
porosity, &
porosityMapping, &
STIFFNESS_DEGRADATION_damage_ID, &
STIFFNESS_DEGRADATION_porosity_ID
STIFFNESS_DEGRADATION_damage_ID
implicit none
integer(pInt), intent(in) :: &
@ -800,8 +754,6 @@ subroutine constitutive_hooke_SandItsTangents(S, dS_dFe, dS_dFi, Fe, Fi, ipc, ip
degradationType: select case(phase_stiffnessDegradation(d,material_phase(ipc,ip,el)))
case (STIFFNESS_DEGRADATION_damage_ID) degradationType
C = C * damage(ho)%p(damageMapping(ho)%p(ip,el))**2_pInt
case (STIFFNESS_DEGRADATION_porosity_ID) degradationType
C = C * porosity(ho)%p(porosityMapping(ho)%p(ip,el))**2_pInt
end select degradationType
enddo DegradationLoop
@ -912,7 +864,9 @@ subroutine constitutive_collectDotState(S6, FeArray, Fi, FpArray, subdt, subfrac
plasticityType: select case (phase_plasticity(material_phase(ipc,ip,el)))
case (PLASTICITY_ISOTROPIC_ID) plasticityType
call plastic_isotropic_dotState (math_Mandel33to6(Mp),ipc,ip,el)
of = phasememberAt(ipc,ip,el)
instance = phase_plasticityInstance(material_phase(ipc,ip,el))
call plastic_isotropic_dotState (Mp,instance,of)
case (PLASTICITY_PHENOPOWERLAW_ID) plasticityType
of = phasememberAt(ipc,ip,el)
@ -930,8 +884,9 @@ subroutine constitutive_collectDotState(S6, FeArray, Fi, FpArray, subdt, subfrac
call plastic_dislotwin_dotState (Mp,temperature(ho)%p(tme),instance,of)
case (PLASTICITY_DISLOUCLA_ID) plasticityType
call plastic_disloucla_dotState (math_Mandel33to6(Mp),temperature(ho)%p(tme), &
ipc,ip,el)
of = phasememberAt(ipc,ip,el)
instance = phase_plasticityInstance(material_phase(ipc,ip,el))
call plastic_disloucla_dotState (Mp,temperature(ho)%p(tme),instance,of)
case (PLASTICITY_NONLOCAL_ID) plasticityType
call plastic_nonlocal_dotState (math_Mandel33to6(Mp),FeArray,FpArray,temperature(ho)%p(tme), &
@ -985,19 +940,13 @@ subroutine constitutive_collectDeltaState(S6, Fe, Fi, ipc, ip, el)
material_phase, &
PLASTICITY_KINEHARDENING_ID, &
PLASTICITY_NONLOCAL_ID, &
SOURCE_damage_isoBrittle_ID, &
SOURCE_vacancy_irradiation_ID, &
SOURCE_vacancy_thermalfluc_ID
SOURCE_damage_isoBrittle_ID
use plastic_kinehardening, only: &
plastic_kinehardening_deltaState
use plastic_nonlocal, only: &
plastic_nonlocal_deltaState
use source_damage_isoBrittle, only: &
source_damage_isoBrittle_deltaState
use source_vacancy_irradiation, only: &
source_vacancy_irradiation_deltaState
use source_vacancy_thermalfluc, only: &
source_vacancy_thermalfluc_deltaState
implicit none
integer(pInt), intent(in) :: &
@ -1037,12 +986,6 @@ subroutine constitutive_collectDeltaState(S6, Fe, Fi, ipc, ip, el)
call source_damage_isoBrittle_deltaState (constitutive_homogenizedC(ipc,ip,el), Fe, &
ipc, ip, el)
case (SOURCE_vacancy_irradiation_ID) sourceType
call source_vacancy_irradiation_deltaState(ipc, ip, el)
case (SOURCE_vacancy_thermalfluc_ID) sourceType
call source_vacancy_thermalfluc_deltaState(ipc, ip, el)
end select sourceType
enddo SourceLoop
@ -1142,8 +1085,10 @@ function constitutive_postResults(S6, Fi, FeArray, ipc, ip, el)
plasticityType: select case (phase_plasticity(material_phase(ipc,ip,el)))
case (PLASTICITY_ISOTROPIC_ID) plasticityType
of = phasememberAt(ipc,ip,el)
instance = phase_plasticityInstance(material_phase(ipc,ip,el))
constitutive_postResults(startPos:endPos) = &
plastic_isotropic_postResults(S6,ipc,ip,el)
plastic_isotropic_postResults(Mp,instance,of)
case (PLASTICITY_PHENOPOWERLAW_ID) plasticityType
of = phasememberAt(ipc,ip,el)
@ -1164,8 +1109,10 @@ function constitutive_postResults(S6, Fi, FeArray, ipc, ip, el)
plastic_dislotwin_postResults(Mp,temperature(ho)%p(tme),instance,of)
case (PLASTICITY_DISLOUCLA_ID) plasticityType
of = phasememberAt(ipc,ip,el)
instance = phase_plasticityInstance(material_phase(ipc,ip,el))
constitutive_postResults(startPos:endPos) = &
plastic_disloucla_postResults(S6,temperature(ho)%p(tme),ipc,ip,el)
plastic_disloucla_postResults(Mp,temperature(ho)%p(tme),instance,of)
case (PLASTICITY_NONLOCAL_ID) plasticityType
constitutive_postResults(startPos:endPos) = &

248
src/homogenization.f90
View File

@ -25,10 +25,7 @@ module homogenization
materialpoint_sizeResults, &
homogenization_maxSizePostResults, &
thermal_maxSizePostResults, &
damage_maxSizePostResults, &
vacancyflux_maxSizePostResults, &
porosity_maxSizePostResults, &
hydrogenflux_maxSizePostResults
damage_maxSizePostResults
real(pReal), dimension(:,:,:,:), allocatable, private :: &
materialpoint_subF0, & !< def grad of IP at beginning of homogenization increment
@ -100,13 +97,6 @@ subroutine homogenization_init
use damage_none
use damage_local
use damage_nonlocal
use vacancyflux_isoconc
use vacancyflux_isochempot
use vacancyflux_cahnhilliard
use porosity_none
use porosity_phasefield
use hydrogenflux_isoconc
use hydrogenflux_cahnhilliard
use IO
use numerics, only: &
worldrank
@ -155,33 +145,6 @@ subroutine homogenization_init
if (any(damage_type == DAMAGE_nonlocal_ID)) &
call damage_nonlocal_init(FILEUNIT)
!--------------------------------------------------------------------------------------------------
! parse vacancy transport from config file
call IO_checkAndRewind(FILEUNIT)
if (any(vacancyflux_type == VACANCYFLUX_isoconc_ID)) &
call vacancyflux_isoconc_init()
if (any(vacancyflux_type == VACANCYFLUX_isochempot_ID)) &
call vacancyflux_isochempot_init(FILEUNIT)
if (any(vacancyflux_type == VACANCYFLUX_cahnhilliard_ID)) &
call vacancyflux_cahnhilliard_init(FILEUNIT)
!--------------------------------------------------------------------------------------------------
! parse porosity from config file
call IO_checkAndRewind(FILEUNIT)
if (any(porosity_type == POROSITY_none_ID)) &
call porosity_none_init()
if (any(porosity_type == POROSITY_phasefield_ID)) &
call porosity_phasefield_init(FILEUNIT)
!--------------------------------------------------------------------------------------------------
! parse hydrogen transport from config file
call IO_checkAndRewind(FILEUNIT)
if (any(hydrogenflux_type == HYDROGENFLUX_isoconc_ID)) &
call hydrogenflux_isoconc_init()
if (any(hydrogenflux_type == HYDROGENFLUX_cahnhilliard_ID)) &
call hydrogenflux_cahnhilliard_init(FILEUNIT)
close(FILEUNIT)
!--------------------------------------------------------------------------------------------------
! write description file for homogenization output
mainProcess2: if (worldrank == 0) then
@ -277,83 +240,6 @@ subroutine homogenization_init
enddo
endif
endif
i = vacancyflux_typeInstance(p) ! which instance of this vacancy flux type
valid = .true. ! assume valid
select case(vacancyflux_type(p)) ! split per vacancy flux type
case (VACANCYFLUX_isoconc_ID)
outputName = VACANCYFLUX_isoconc_label
thisNoutput => null()
thisOutput => null()
thisSize => null()
case (VACANCYFLUX_isochempot_ID)
outputName = VACANCYFLUX_isochempot_label
thisNoutput => vacancyflux_isochempot_Noutput
thisOutput => vacancyflux_isochempot_output
thisSize => vacancyflux_isochempot_sizePostResult
case (VACANCYFLUX_cahnhilliard_ID)
outputName = VACANCYFLUX_cahnhilliard_label
thisNoutput => vacancyflux_cahnhilliard_Noutput
thisOutput => vacancyflux_cahnhilliard_output
thisSize => vacancyflux_cahnhilliard_sizePostResult
case default
valid = .false.
end select
if (valid) then
write(FILEUNIT,'(a)') '(vacancyflux)'//char(9)//trim(outputName)
if (vacancyflux_type(p) /= VACANCYFLUX_isoconc_ID) then
do e = 1,thisNoutput(i)
write(FILEUNIT,'(a,i4)') trim(thisOutput(e,i))//char(9),thisSize(e,i)
enddo
endif
endif
i = porosity_typeInstance(p) ! which instance of this porosity type
valid = .true. ! assume valid
select case(porosity_type(p)) ! split per porosity type
case (POROSITY_none_ID)
outputName = POROSITY_none_label
thisNoutput => null()
thisOutput => null()
thisSize => null()
case (POROSITY_phasefield_ID)
outputName = POROSITY_phasefield_label
thisNoutput => porosity_phasefield_Noutput
thisOutput => porosity_phasefield_output
thisSize => porosity_phasefield_sizePostResult
case default
valid = .false.
end select
if (valid) then
write(FILEUNIT,'(a)') '(porosity)'//char(9)//trim(outputName)
if (porosity_type(p) /= POROSITY_none_ID) then
do e = 1,thisNoutput(i)
write(FILEUNIT,'(a,i4)') trim(thisOutput(e,i))//char(9),thisSize(e,i)
enddo
endif
endif
i = hydrogenflux_typeInstance(p) ! which instance of this hydrogen flux type
valid = .true. ! assume valid
select case(hydrogenflux_type(p)) ! split per hydrogen flux type
case (HYDROGENFLUX_isoconc_ID)
outputName = HYDROGENFLUX_isoconc_label
thisNoutput => null()
thisOutput => null()
thisSize => null()
case (HYDROGENFLUX_cahnhilliard_ID)
outputName = HYDROGENFLUX_cahnhilliard_label
thisNoutput => hydrogenflux_cahnhilliard_Noutput
thisOutput => hydrogenflux_cahnhilliard_output
thisSize => hydrogenflux_cahnhilliard_sizePostResult
case default
valid = .false.
end select
if (valid) then
write(FILEUNIT,'(a)') '(hydrogenflux)'//char(9)//trim(outputName)
if (hydrogenflux_type(p) /= HYDROGENFLUX_isoconc_ID) then
do e = 1,thisNoutput(i)
write(FILEUNIT,'(a,i4)') trim(thisOutput(e,i))//char(9),thisSize(e,i)
enddo
endif
endif
endif
enddo
close(FILEUNIT)
@ -383,25 +269,16 @@ subroutine homogenization_init
homogenization_maxSizePostResults = 0_pInt
thermal_maxSizePostResults = 0_pInt
damage_maxSizePostResults = 0_pInt
vacancyflux_maxSizePostResults = 0_pInt
porosity_maxSizePostResults = 0_pInt
hydrogenflux_maxSizePostResults = 0_pInt
do p = 1,size(config_homogenization)
homogenization_maxSizePostResults = max(homogenization_maxSizePostResults,homogState (p)%sizePostResults)
thermal_maxSizePostResults = max(thermal_maxSizePostResults, thermalState (p)%sizePostResults)
damage_maxSizePostResults = max(damage_maxSizePostResults ,damageState (p)%sizePostResults)
vacancyflux_maxSizePostResults = max(vacancyflux_maxSizePostResults ,vacancyfluxState (p)%sizePostResults)
porosity_maxSizePostResults = max(porosity_maxSizePostResults ,porosityState (p)%sizePostResults)
hydrogenflux_maxSizePostResults = max(hydrogenflux_maxSizePostResults ,hydrogenfluxState(p)%sizePostResults)
enddo
materialpoint_sizeResults = 1 & ! grain count
+ 1 + homogenization_maxSizePostResults & ! homogSize & homogResult
+ thermal_maxSizePostResults &
+ damage_maxSizePostResults &
+ vacancyflux_maxSizePostResults &
+ porosity_maxSizePostResults &
+ hydrogenflux_maxSizePostResults &
+ homogenization_maxNgrains * (1 + crystallite_maxSizePostResults & ! crystallite size & crystallite results
+ 1 + constitutive_plasticity_maxSizePostResults & ! constitutive size & constitutive results
+ constitutive_source_maxSizePostResults)
@ -460,9 +337,6 @@ subroutine materialpoint_stressAndItsTangent(updateJaco,dt)
homogState, &
thermalState, &
damageState, &
vacancyfluxState, &
porosityState, &
hydrogenfluxState, &
phase_Nsources, &
mappingHomogenization, &
phaseAt, phasememberAt, &
@ -569,18 +443,6 @@ subroutine materialpoint_stressAndItsTangent(updateJaco,dt)
damageState(mappingHomogenization(2,i,e))%sizeState > 0_pInt) &
damageState(mappingHomogenization(2,i,e))%subState0(:,mappingHomogenization(1,i,e)) = &
damageState(mappingHomogenization(2,i,e))%State0( :,mappingHomogenization(1,i,e)) ! ...internal damage state
forall(i = FEsolving_execIP(1,e):FEsolving_execIP(2,e), &
vacancyfluxState(mappingHomogenization(2,i,e))%sizeState > 0_pInt) &
vacancyfluxState(mappingHomogenization(2,i,e))%subState0(:,mappingHomogenization(1,i,e)) = &
vacancyfluxState(mappingHomogenization(2,i,e))%State0( :,mappingHomogenization(1,i,e)) ! ...internal vacancy transport state
forall(i = FEsolving_execIP(1,e):FEsolving_execIP(2,e), &
porosityState(mappingHomogenization(2,i,e))%sizeState > 0_pInt) &
porosityState(mappingHomogenization(2,i,e))%subState0(:,mappingHomogenization(1,i,e)) = &
porosityState(mappingHomogenization(2,i,e))%State0( :,mappingHomogenization(1,i,e)) ! ...internal porosity state
forall(i = FEsolving_execIP(1,e):FEsolving_execIP(2,e), &
hydrogenfluxState(mappingHomogenization(2,i,e))%sizeState > 0_pInt) &
hydrogenfluxState(mappingHomogenization(2,i,e))%subState0(:,mappingHomogenization(1,i,e)) = &
hydrogenfluxState(mappingHomogenization(2,i,e))%State0( :,mappingHomogenization(1,i,e)) ! ...internal hydrogen transport state
enddo
NiterationHomog = 0_pInt
@ -654,18 +516,6 @@ subroutine materialpoint_stressAndItsTangent(updateJaco,dt)
damageState(mappingHomogenization(2,i,e))%sizeState > 0_pInt) &
damageState(mappingHomogenization(2,i,e))%subState0(:,mappingHomogenization(1,i,e)) = &
damageState(mappingHomogenization(2,i,e))%State( :,mappingHomogenization(1,i,e)) ! ...internal damage state
forall(i = FEsolving_execIP(1,e):FEsolving_execIP(2,e), &
vacancyfluxState(mappingHomogenization(2,i,e))%sizeState > 0_pInt) &
vacancyfluxState(mappingHomogenization(2,i,e))%subState0(:,mappingHomogenization(1,i,e)) = &
vacancyfluxState(mappingHomogenization(2,i,e))%State( :,mappingHomogenization(1,i,e))! ...internal vacancy transport state
forall(i = FEsolving_execIP(1,e):FEsolving_execIP(2,e), &
porosityState(mappingHomogenization(2,i,e))%sizeState > 0_pInt) &
porosityState(mappingHomogenization(2,i,e))%subState0(:,mappingHomogenization(1,i,e)) = &
porosityState(mappingHomogenization(2,i,e))%State( :,mappingHomogenization(1,i,e))! ...internal porosity state
forall(i = FEsolving_execIP(1,e):FEsolving_execIP(2,e), &
hydrogenfluxState(mappingHomogenization(2,i,e))%sizeState > 0_pInt) &
hydrogenfluxState(mappingHomogenization(2,i,e))%subState0(:,mappingHomogenization(1,i,e)) = &
hydrogenfluxState(mappingHomogenization(2,i,e))%State( :,mappingHomogenization(1,i,e))! ...internal hydrogen transport state
materialpoint_subF0(1:3,1:3,i,e) = materialpoint_subF(1:3,1:3,i,e) ! ...def grad
endif steppingNeeded
@ -729,18 +579,6 @@ subroutine materialpoint_stressAndItsTangent(updateJaco,dt)
damageState(mappingHomogenization(2,i,e))%sizeState > 0_pInt) &
damageState(mappingHomogenization(2,i,e))%State( :,mappingHomogenization(1,i,e)) = &
damageState(mappingHomogenization(2,i,e))%subState0(:,mappingHomogenization(1,i,e)) ! ...internal damage state
forall(i = FEsolving_execIP(1,e):FEsolving_execIP(2,e), &
vacancyfluxState(mappingHomogenization(2,i,e))%sizeState > 0_pInt) &
vacancyfluxState(mappingHomogenization(2,i,e))%State( :,mappingHomogenization(1,i,e)) = &
vacancyfluxState(mappingHomogenization(2,i,e))%subState0(:,mappingHomogenization(1,i,e))! ...internal vacancy transport state
forall(i = FEsolving_execIP(1,e):FEsolving_execIP(2,e), &
porosityState(mappingHomogenization(2,i,e))%sizeState > 0_pInt) &
porosityState(mappingHomogenization(2,i,e))%State( :,mappingHomogenization(1,i,e)) = &
porosityState(mappingHomogenization(2,i,e))%subState0(:,mappingHomogenization(1,i,e))! ...internal porosity state
forall(i = FEsolving_execIP(1,e):FEsolving_execIP(2,e), &
hydrogenfluxState(mappingHomogenization(2,i,e))%sizeState > 0_pInt) &
hydrogenfluxState(mappingHomogenization(2,i,e))%State( :,mappingHomogenization(1,i,e)) = &
hydrogenfluxState(mappingHomogenization(2,i,e))%subState0(:,mappingHomogenization(1,i,e))! ...internal hydrogen transport state
endif
endif converged
@ -846,9 +684,6 @@ subroutine materialpoint_postResults
homogState, &
thermalState, &
damageState, &
vacancyfluxState, &
porosityState, &
hydrogenfluxState, &
plasticState, &
sourceState, &
material_phase, &
@ -877,10 +712,7 @@ subroutine materialpoint_postResults
theSize = homogState (mappingHomogenization(2,i,e))%sizePostResults &
+ thermalState (mappingHomogenization(2,i,e))%sizePostResults &
+ damageState (mappingHomogenization(2,i,e))%sizePostResults &
+ vacancyfluxState (mappingHomogenization(2,i,e))%sizePostResults &
+ porosityState (mappingHomogenization(2,i,e))%sizePostResults &
+ hydrogenfluxState(mappingHomogenization(2,i,e))%sizePostResults
+ damageState (mappingHomogenization(2,i,e))%sizePostResults
materialpoint_results(thePos+1,i,e) = real(theSize,pReal) ! tell size of homogenization results
thePos = thePos + 1_pInt
@ -964,12 +796,10 @@ function homogenization_updateState(ip,el)
homogenization_type, &
thermal_type, &
damage_type, &
vacancyflux_type, &
homogenization_maxNgrains, &
HOMOGENIZATION_RGC_ID, &
THERMAL_adiabatic_ID, &
DAMAGE_local_ID, &
VACANCYFLUX_isochempot_ID
DAMAGE_local_ID
use crystallite, only: &
crystallite_P, &
crystallite_dPdF, &
@ -981,8 +811,6 @@ function homogenization_updateState(ip,el)
thermal_adiabatic_updateState
use damage_local, only: &
damage_local_updateState
use vacancyflux_isochempot, only: &
vacancyflux_isochempot_updateState
implicit none
integer(pInt), intent(in) :: &
@ -1023,15 +851,6 @@ function homogenization_updateState(ip,el)
el)
end select chosenDamage
chosenVacancyflux: select case (vacancyflux_type(mesh_element(3,el)))
case (VACANCYFLUX_isochempot_ID) chosenVacancyflux
homogenization_updateState = &
homogenization_updateState .and. &
vacancyflux_isochempot_updateState(materialpoint_subdt(ip,el), &
ip, &
el)
end select chosenVacancyflux
end function homogenization_updateState
@ -1095,15 +914,9 @@ function homogenization_postResults(ip,el)
homogState, &
thermalState, &
damageState, &
vacancyfluxState, &
porosityState, &
hydrogenfluxState, &
homogenization_type, &
thermal_type, &
damage_type, &
vacancyflux_type, &
porosity_type, &
hydrogenflux_type, &
HOMOGENIZATION_NONE_ID, &
HOMOGENIZATION_ISOSTRAIN_ID, &
HOMOGENIZATION_RGC_ID, &
@ -1112,14 +925,7 @@ function homogenization_postResults(ip,el)
THERMAL_conduction_ID, &
DAMAGE_none_ID, &
DAMAGE_local_ID, &
DAMAGE_nonlocal_ID, &
VACANCYFLUX_isoconc_ID, &
VACANCYFLUX_isochempot_ID, &
VACANCYFLUX_cahnhilliard_ID, &
POROSITY_none_ID, &
POROSITY_phasefield_ID, &
HYDROGENFLUX_isoconc_ID, &
HYDROGENFLUX_cahnhilliard_ID
DAMAGE_nonlocal_ID
use homogenization_isostrain, only: &
homogenization_isostrain_postResults
use homogenization_RGC, only: &
@ -1132,14 +938,6 @@ function homogenization_postResults(ip,el)
damage_local_postResults
use damage_nonlocal, only: &
damage_nonlocal_postResults
use vacancyflux_isochempot, only: &
vacancyflux_isochempot_postResults
use vacancyflux_cahnhilliard, only: &
vacancyflux_cahnhilliard_postResults
use porosity_phasefield, only: &
porosity_phasefield_postResults
use hydrogenflux_cahnhilliard, only: &
hydrogenflux_cahnhilliard_postResults
implicit none
integer(pInt), intent(in) :: &
@ -1147,10 +945,7 @@ function homogenization_postResults(ip,el)
el !< element number
real(pReal), dimension( homogState (mappingHomogenization(2,ip,el))%sizePostResults &
+ thermalState (mappingHomogenization(2,ip,el))%sizePostResults &
+ damageState (mappingHomogenization(2,ip,el))%sizePostResults &
+ vacancyfluxState (mappingHomogenization(2,ip,el))%sizePostResults &
+ porosityState (mappingHomogenization(2,ip,el))%sizePostResults &
+ hydrogenfluxState(mappingHomogenization(2,ip,el))%sizePostResults) :: &
+ damageState (mappingHomogenization(2,ip,el))%sizePostResults) :: &
homogenization_postResults
integer(pInt) :: &
startPos, endPos
@ -1205,39 +1000,6 @@ function homogenization_postResults(ip,el)
damage_nonlocal_postResults(ip, el)
end select chosenDamage
startPos = endPos + 1_pInt
endPos = endPos + vacancyfluxState(mappingHomogenization(2,ip,el))%sizePostResults
chosenVacancyflux: select case (vacancyflux_type(mesh_element(3,el)))
case (VACANCYFLUX_isoconc_ID) chosenVacancyflux
case (VACANCYFLUX_isochempot_ID) chosenVacancyflux
homogenization_postResults(startPos:endPos) = &
vacancyflux_isochempot_postResults(ip, el)
case (VACANCYFLUX_cahnhilliard_ID) chosenVacancyflux
homogenization_postResults(startPos:endPos) = &
vacancyflux_cahnhilliard_postResults(ip, el)
end select chosenVacancyflux
startPos = endPos + 1_pInt
endPos = endPos + porosityState(mappingHomogenization(2,ip,el))%sizePostResults
chosenPorosity: select case (porosity_type(mesh_element(3,el)))
case (POROSITY_none_ID) chosenPorosity
case (POROSITY_phasefield_ID) chosenPorosity
homogenization_postResults(startPos:endPos) = &
porosity_phasefield_postResults(ip, el)
end select chosenPorosity
startPos = endPos + 1_pInt
endPos = endPos + hydrogenfluxState(mappingHomogenization(2,ip,el))%sizePostResults
chosenHydrogenflux: select case (hydrogenflux_type(mesh_element(3,el)))
case (HYDROGENFLUX_isoconc_ID) chosenHydrogenflux
case (HYDROGENFLUX_cahnhilliard_ID) chosenHydrogenflux
homogenization_postResults(startPos:endPos) = &
hydrogenflux_cahnhilliard_postResults(ip, el)
end select chosenHydrogenflux
end function homogenization_postResults
end module homogenization

508
src/hydrogenflux_cahnhilliard.f90
View File

@ -1,508 +0,0 @@
!--------------------------------------------------------------------------------------------------
!> @author Pratheek Shanthraj, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine for conservative transport of solute hydrogen
!> @details to be done
!--------------------------------------------------------------------------------------------------
module hydrogenflux_cahnhilliard
use prec, only: &
pReal, &
pInt
implicit none
private
integer(pInt), dimension(:), allocatable, public, protected :: &
hydrogenflux_cahnhilliard_sizePostResults !< cumulative size of post results
integer(pInt), dimension(:,:), allocatable, target, public :: &
hydrogenflux_cahnhilliard_sizePostResult !< size of each post result output
character(len=64), dimension(:,:), allocatable, target, public :: &
hydrogenflux_cahnhilliard_output !< name of each post result output
integer(pInt), dimension(:), allocatable, target, public :: &
hydrogenflux_cahnhilliard_Noutput !< number of outputs per instance of this damage
real(pReal), parameter, private :: &
kB = 1.3806488e-23_pReal !< Boltzmann constant in J/Kelvin
enum, bind(c)
enumerator :: undefined_ID, &
hydrogenConc_ID
end enum
integer(kind(undefined_ID)), dimension(:,:), allocatable, private :: &
hydrogenflux_cahnhilliard_outputID !< ID of each post result output
public :: &
hydrogenflux_cahnhilliard_init, &
hydrogenflux_cahnhilliard_getMobility33, &
hydrogenflux_cahnhilliard_getDiffusion33, &
hydrogenflux_cahnhilliard_getFormationEnergy, &
hydrogenflux_cahnhilliard_KinematicChemPotAndItsTangent, &
hydrogenflux_cahnhilliard_getChemPotAndItsTangent, &
hydrogenflux_cahnhilliard_putHydrogenConcAndItsRate, &
hydrogenflux_cahnhilliard_postResults
contains
!--------------------------------------------------------------------------------------------------
!> @brief module initialization
!> @details reads in material parameters, allocates arrays, and does sanity checks
!--------------------------------------------------------------------------------------------------
subroutine hydrogenflux_cahnhilliard_init(fileUnit)
#if defined(__GFORTRAN__) || __INTEL_COMPILER >= 1800
use, intrinsic :: iso_fortran_env, only: &
compiler_version, &
compiler_options
#endif
use IO, only: &
IO_read, &
IO_lc, &
IO_getTag, &
IO_isBlank, &
IO_stringPos, &
IO_stringValue, &
IO_floatValue, &
IO_intValue, &
IO_warning, &
IO_error, &
IO_timeStamp, &
IO_EOF
use material, only: &
hydrogenflux_type, &
hydrogenflux_typeInstance, &
homogenization_Noutput, &
HYDROGENFLUX_cahnhilliard_label, &
HYDROGENFLUX_cahnhilliard_ID, &
material_homog, &
mappingHomogenization, &
hydrogenfluxState, &
hydrogenfluxMapping, &
hydrogenConc, &
hydrogenConcRate, &
hydrogenflux_initialCh
use config, only: &
material_partHomogenization, &
material_partPhase
implicit none
integer(pInt), intent(in) :: fileUnit
integer(pInt), allocatable, dimension(:) :: chunkPos
integer(pInt) :: maxNinstance,mySize=0_pInt,section,instance,o
integer(pInt) :: sizeState
integer(pInt) :: NofMyHomog
character(len=65536) :: &
tag = '', &
line = ''
write(6,'(/,a)') ' <<<+- hydrogenflux_'//HYDROGENFLUX_cahnhilliard_label//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
maxNinstance = int(count(hydrogenflux_type == HYDROGENFLUX_cahnhilliard_ID),pInt)
if (maxNinstance == 0_pInt) return
allocate(hydrogenflux_cahnhilliard_sizePostResults(maxNinstance), source=0_pInt)
allocate(hydrogenflux_cahnhilliard_sizePostResult (maxval(homogenization_Noutput),maxNinstance),source=0_pInt)
allocate(hydrogenflux_cahnhilliard_output (maxval(homogenization_Noutput),maxNinstance))
hydrogenflux_cahnhilliard_output = ''
allocate(hydrogenflux_cahnhilliard_outputID (maxval(homogenization_Noutput),maxNinstance),source=undefined_ID)
allocate(hydrogenflux_cahnhilliard_Noutput (maxNinstance), source=0_pInt)
rewind(fileUnit)
section = 0_pInt
do while (trim(line) /= IO_EOF .and. IO_lc(IO_getTag(line,'<','>')) /= material_partHomogenization)! wind forward to <homogenization>
line = IO_read(fileUnit)
enddo
parsingHomog: do while (trim(line) /= IO_EOF) ! read through sections of homog part
line = IO_read(fileUnit)
if (IO_isBlank(line)) cycle ! skip empty lines
if (IO_getTag(line,'<','>') /= '') then ! stop at next part
line = IO_read(fileUnit, .true.) ! reset IO_read
exit
endif
if (IO_getTag(line,'[',']') /= '') then ! next homog section
section = section + 1_pInt ! advance homog section counter
cycle ! skip to next line
endif
if (section > 0_pInt ) then; if (hydrogenflux_type(section) == HYDROGENFLUX_cahnhilliard_ID) then ! do not short-circuit here (.and. with next if statemen). It's not safe in Fortran
instance = hydrogenflux_typeInstance(section) ! which instance of my hydrogenflux is present homog
chunkPos = IO_stringPos(line)
tag = IO_lc(IO_stringValue(line,chunkPos,1_pInt)) ! extract key
select case(tag)
case ('(output)')
select case(IO_lc(IO_stringValue(line,chunkPos,2_pInt)))
case ('hydrogenconc')
hydrogenflux_cahnhilliard_Noutput(instance) = hydrogenflux_cahnhilliard_Noutput(instance) + 1_pInt
hydrogenflux_cahnhilliard_outputID(hydrogenflux_cahnhilliard_Noutput(instance),instance) = hydrogenConc_ID
hydrogenflux_cahnhilliard_output(hydrogenflux_cahnhilliard_Noutput(instance),instance) = &
IO_lc(IO_stringValue(line,chunkPos,2_pInt))
end select
end select
endif; endif
enddo parsingHomog
rewind(fileUnit)
section = 0_pInt
do while (trim(line) /= IO_EOF .and. IO_lc(IO_getTag(line,'<','>')) /= material_partPhase) ! wind forward to <homogenization>
line = IO_read(fileUnit)
enddo
initializeInstances: do section = 1_pInt, size(hydrogenflux_type)
if (hydrogenflux_type(section) == HYDROGENFLUX_cahnhilliard_ID) then
NofMyHomog=count(material_homog==section)
instance = hydrogenflux_typeInstance(section)
!--------------------------------------------------------------------------------------------------
! Determine size of postResults array
outputsLoop: do o = 1_pInt,hydrogenflux_cahnhilliard_Noutput(instance)
select case(hydrogenflux_cahnhilliard_outputID(o,instance))
case(hydrogenConc_ID)
mySize = 1_pInt
end select
if (mySize > 0_pInt) then ! any meaningful output found
hydrogenflux_cahnhilliard_sizePostResult(o,instance) = mySize
hydrogenflux_cahnhilliard_sizePostResults(instance) = hydrogenflux_cahnhilliard_sizePostResults(instance) + mySize
endif
enddo outputsLoop
! allocate state arrays
sizeState = 0_pInt
hydrogenfluxState(section)%sizeState = sizeState
hydrogenfluxState(section)%sizePostResults = hydrogenflux_cahnhilliard_sizePostResults(instance)
allocate(hydrogenfluxState(section)%state0 (sizeState,NofMyHomog))
allocate(hydrogenfluxState(section)%subState0(sizeState,NofMyHomog))
allocate(hydrogenfluxState(section)%state (sizeState,NofMyHomog))
nullify(hydrogenfluxMapping(section)%p)
hydrogenfluxMapping(section)%p => mappingHomogenization(1,:,:)
deallocate(hydrogenConc (section)%p)
deallocate(hydrogenConcRate(section)%p)
allocate (hydrogenConc (section)%p(NofMyHomog), source=hydrogenflux_initialCh(section))
allocate (hydrogenConcRate(section)%p(NofMyHomog), source=0.0_pReal)
endif
enddo initializeInstances
end subroutine hydrogenflux_cahnhilliard_init
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized solute mobility tensor in reference configuration
!--------------------------------------------------------------------------------------------------
function hydrogenflux_cahnhilliard_getMobility33(ip,el)
use lattice, only: &
lattice_hydrogenfluxMobility33
use material, only: &
homogenization_Ngrains, &
material_phase
use mesh, only: &
mesh_element
use crystallite, only: &
crystallite_push33ToRef
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), dimension(3,3) :: &
hydrogenflux_cahnhilliard_getMobility33
integer(pInt) :: &
grain
hydrogenflux_cahnhilliard_getMobility33 = 0.0_pReal
do grain = 1, homogenization_Ngrains(mesh_element(3,el))
hydrogenflux_cahnhilliard_getMobility33 = hydrogenflux_cahnhilliard_getMobility33 + &
crystallite_push33ToRef(grain,ip,el,lattice_hydrogenfluxMobility33(:,:,material_phase(grain,ip,el)))
enddo
hydrogenflux_cahnhilliard_getMobility33 = &
hydrogenflux_cahnhilliard_getMobility33/real(homogenization_Ngrains(mesh_element(3,el)),pReal)
end function hydrogenflux_cahnhilliard_getMobility33
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized solute nonlocal diffusion tensor in reference configuration
!--------------------------------------------------------------------------------------------------
function hydrogenflux_cahnhilliard_getDiffusion33(ip,el)
use lattice, only: &
lattice_hydrogenfluxDiffusion33
use material, only: &
homogenization_Ngrains, &
material_phase
use mesh, only: &
mesh_element
use crystallite, only: &
crystallite_push33ToRef
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), dimension(3,3) :: &
hydrogenflux_cahnhilliard_getDiffusion33
integer(pInt) :: &
grain
hydrogenflux_cahnhilliard_getDiffusion33 = 0.0_pReal
do grain = 1, homogenization_Ngrains(mesh_element(3,el))
hydrogenflux_cahnhilliard_getDiffusion33 = hydrogenflux_cahnhilliard_getDiffusion33 + &
crystallite_push33ToRef(grain,ip,el,lattice_hydrogenfluxDiffusion33(:,:,material_phase(grain,ip,el)))
enddo
hydrogenflux_cahnhilliard_getDiffusion33 = &
hydrogenflux_cahnhilliard_getDiffusion33/real(homogenization_Ngrains(mesh_element(3,el)),pReal)
end function hydrogenflux_cahnhilliard_getDiffusion33
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized solution energy
!--------------------------------------------------------------------------------------------------
function hydrogenflux_cahnhilliard_getFormationEnergy(ip,el)
use lattice, only: &
lattice_hydrogenFormationEnergy, &
lattice_hydrogenVol, &
lattice_hydrogenSurfaceEnergy
use material, only: &
homogenization_Ngrains, &
material_phase
use mesh, only: &
mesh_element
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal) :: &
hydrogenflux_cahnhilliard_getFormationEnergy
integer(pInt) :: &
grain
hydrogenflux_cahnhilliard_getFormationEnergy = 0.0_pReal
do grain = 1, homogenization_Ngrains(mesh_element(3,el))
hydrogenflux_cahnhilliard_getFormationEnergy = hydrogenflux_cahnhilliard_getFormationEnergy + &
lattice_hydrogenFormationEnergy(material_phase(grain,ip,el))/ &
lattice_hydrogenVol(material_phase(grain,ip,el))/ &
lattice_hydrogenSurfaceEnergy(material_phase(grain,ip,el))
enddo
hydrogenflux_cahnhilliard_getFormationEnergy = &
hydrogenflux_cahnhilliard_getFormationEnergy/real(homogenization_Ngrains(mesh_element(3,el)),pReal)
end function hydrogenflux_cahnhilliard_getFormationEnergy
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized hydrogen entropy coefficient
!--------------------------------------------------------------------------------------------------
function hydrogenflux_cahnhilliard_getEntropicCoeff(ip,el)
use lattice, only: &
lattice_hydrogenVol, &
lattice_hydrogenSurfaceEnergy
use material, only: &
homogenization_Ngrains, &
material_homog, &
material_phase, &
temperature, &
thermalMapping
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal) :: &
hydrogenflux_cahnhilliard_getEntropicCoeff
integer(pInt) :: &
grain
hydrogenflux_cahnhilliard_getEntropicCoeff = 0.0_pReal
do grain = 1, homogenization_Ngrains(material_homog(ip,el))
hydrogenflux_cahnhilliard_getEntropicCoeff = hydrogenflux_cahnhilliard_getEntropicCoeff + &
kB/ &
lattice_hydrogenVol(material_phase(grain,ip,el))/ &
lattice_hydrogenSurfaceEnergy(material_phase(grain,ip,el))
enddo
hydrogenflux_cahnhilliard_getEntropicCoeff = hydrogenflux_cahnhilliard_getEntropicCoeff* &
temperature(material_homog(ip,el))%p(thermalMapping(material_homog(ip,el))%p(ip,el))/ &
real(homogenization_Ngrains(material_homog(ip,el)),pReal)
end function hydrogenflux_cahnhilliard_getEntropicCoeff
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized kinematic contribution to chemical potential
!--------------------------------------------------------------------------------------------------
subroutine hydrogenflux_cahnhilliard_KinematicChemPotAndItsTangent(KPot, dKPot_dCh, Ch, ip, el)
use lattice, only: &
lattice_hydrogenSurfaceEnergy
use material, only: &
homogenization_Ngrains, &
material_homog, &
phase_kinematics, &
phase_Nkinematics, &
material_phase, &
KINEMATICS_hydrogen_strain_ID
use crystallite, only: &
crystallite_Tstar_v, &
crystallite_Fi0, &
crystallite_Fi
use kinematics_hydrogen_strain, only: &
kinematics_hydrogen_strain_ChemPotAndItsTangent
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), intent(in) :: &
Ch
real(pReal), intent(out) :: &
KPot, dKPot_dCh
real(pReal) :: &
my_KPot, my_dKPot_dCh
integer(pInt) :: &
grain, kinematics
KPot = 0.0_pReal
dKPot_dCh = 0.0_pReal
do grain = 1_pInt,homogenization_Ngrains(material_homog(ip,el))
do kinematics = 1_pInt, phase_Nkinematics(material_phase(grain,ip,el))
select case (phase_kinematics(kinematics,material_phase(grain,ip,el)))
case (KINEMATICS_hydrogen_strain_ID)
call kinematics_hydrogen_strain_ChemPotAndItsTangent(my_KPot, my_dKPot_dCh, &
crystallite_Tstar_v(1:6,grain,ip,el), &
crystallite_Fi0(1:3,1:3,grain,ip,el), &
crystallite_Fi (1:3,1:3,grain,ip,el), &
grain,ip, el)
case default
my_KPot = 0.0_pReal
my_dKPot_dCh = 0.0_pReal
end select
KPot = KPot + my_KPot/lattice_hydrogenSurfaceEnergy(material_phase(grain,ip,el))
dKPot_dCh = dKPot_dCh + my_dKPot_dCh/lattice_hydrogenSurfaceEnergy(material_phase(grain,ip,el))
enddo
enddo
KPot = KPot/real(homogenization_Ngrains(material_homog(ip,el)),pReal)
dKPot_dCh = dKPot_dCh/real(homogenization_Ngrains(material_homog(ip,el)),pReal)
end subroutine hydrogenflux_cahnhilliard_KinematicChemPotAndItsTangent
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized chemical potential
!--------------------------------------------------------------------------------------------------
subroutine hydrogenflux_cahnhilliard_getChemPotAndItsTangent(ChemPot,dChemPot_dCh,Ch,ip,el)
use numerics, only: &
hydrogenBoundPenalty, &
hydrogenPolyOrder
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), intent(in) :: &
Ch
real(pReal), intent(out) :: &
ChemPot, &
dChemPot_dCh
real(pReal) :: &
kBT, KPot, dKPot_dCh
integer(pInt) :: &
o
ChemPot = hydrogenflux_cahnhilliard_getFormationEnergy(ip,el)
dChemPot_dCh = 0.0_pReal
kBT = hydrogenflux_cahnhilliard_getEntropicCoeff(ip,el)
do o = 1_pInt, hydrogenPolyOrder
ChemPot = ChemPot + kBT*((2.0_pReal*Ch - 1.0_pReal)**real(2_pInt*o-1_pInt,pReal))/ &
real(2_pInt*o-1_pInt,pReal)
dChemPot_dCh = dChemPot_dCh + 2.0_pReal*kBT*(2.0_pReal*Ch - 1.0_pReal)**real(2_pInt*o-2_pInt,pReal)
enddo
call hydrogenflux_cahnhilliard_KinematicChemPotAndItsTangent(KPot, dKPot_dCh, Ch, ip, el)
ChemPot = ChemPot + KPot
dChemPot_dCh = dChemPot_dCh + dKPot_dCh
if (Ch < 0.0_pReal) then
ChemPot = ChemPot - 3.0_pReal*hydrogenBoundPenalty*Ch*Ch
dChemPot_dCh = dChemPot_dCh - 6.0_pReal*hydrogenBoundPenalty*Ch
elseif (Ch > 1.0_pReal) then
ChemPot = ChemPot + 3.0_pReal*hydrogenBoundPenalty*(1.0_pReal - Ch)*(1.0_pReal - Ch)
dChemPot_dCh = dChemPot_dCh - 6.0_pReal*hydrogenBoundPenalty*(1.0_pReal - Ch)
endif
end subroutine hydrogenflux_cahnhilliard_getChemPotAndItsTangent
!--------------------------------------------------------------------------------------------------
!> @brief updates hydrogen concentration with solution from Cahn-Hilliard PDE for solute transport
!--------------------------------------------------------------------------------------------------
subroutine hydrogenflux_cahnhilliard_putHydrogenConcAndItsRate(Ch,Chdot,ip,el)
use material, only: &
mappingHomogenization, &
hydrogenConc, &
hydrogenConcRate, &
hydrogenfluxMapping
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), intent(in) :: &
Ch, &
Chdot
integer(pInt) :: &
homog, &
offset
homog = mappingHomogenization(2,ip,el)
offset = hydrogenfluxMapping(homog)%p(ip,el)
hydrogenConc (homog)%p(offset) = Ch
hydrogenConcRate(homog)%p(offset) = Chdot
end subroutine hydrogenflux_cahnhilliard_putHydrogenConcAndItsRate
!--------------------------------------------------------------------------------------------------
!> @brief return array of hydrogen transport results
!--------------------------------------------------------------------------------------------------
function hydrogenflux_cahnhilliard_postResults(ip,el)
use material, only: &
mappingHomogenization, &
hydrogenflux_typeInstance, &
hydrogenConc, &
hydrogenfluxMapping
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point
el !< element
real(pReal), dimension(hydrogenflux_cahnhilliard_sizePostResults(hydrogenflux_typeInstance(mappingHomogenization(2,ip,el)))) :: &
hydrogenflux_cahnhilliard_postResults
integer(pInt) :: &
instance, homog, offset, o, c
homog = mappingHomogenization(2,ip,el)
offset = hydrogenfluxMapping(homog)%p(ip,el)
instance = hydrogenflux_typeInstance(homog)
c = 0_pInt
hydrogenflux_cahnhilliard_postResults = 0.0_pReal
do o = 1_pInt,hydrogenflux_cahnhilliard_Noutput(instance)
select case(hydrogenflux_cahnhilliard_outputID(o,instance))
case (hydrogenConc_ID)
hydrogenflux_cahnhilliard_postResults(c+1_pInt) = hydrogenConc(homog)%p(offset)
c = c + 1
end select
enddo
end function hydrogenflux_cahnhilliard_postResults
end module hydrogenflux_cahnhilliard

62
src/hydrogenflux_isoconc.f90
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@ -1,62 +0,0 @@
!--------------------------------------------------------------------------------------------------
!> @author Pratheek Shanthraj, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine for constant hydrogen concentration
!--------------------------------------------------------------------------------------------------
module hydrogenflux_isoconc
implicit none
private
public :: &
hydrogenflux_isoconc_init
contains
!--------------------------------------------------------------------------------------------------
!> @brief allocates all neccessary fields, reads information from material configuration file
!--------------------------------------------------------------------------------------------------
subroutine hydrogenflux_isoconc_init()
#if defined(__GFORTRAN__) || __INTEL_COMPILER >= 1800
use, intrinsic :: iso_fortran_env, only: &
compiler_version, &
compiler_options
#endif
use prec, only: &
pReal, &
pInt
use IO, only: &
IO_timeStamp
use material
use config
implicit none
integer(pInt) :: &
homog, &
NofMyHomog
write(6,'(/,a)') ' <<<+- hydrogenflux_'//HYDROGENFLUX_isoconc_label//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
initializeInstances: do homog = 1_pInt, material_Nhomogenization
myhomog: if (hydrogenflux_type(homog) == HYDROGENFLUX_isoconc_ID) then
NofMyHomog = count(material_homog == homog)
hydrogenfluxState(homog)%sizeState = 0_pInt
hydrogenfluxState(homog)%sizePostResults = 0_pInt
allocate(hydrogenfluxState(homog)%state0 (0_pInt,NofMyHomog), source=0.0_pReal)
allocate(hydrogenfluxState(homog)%subState0(0_pInt,NofMyHomog), source=0.0_pReal)
allocate(hydrogenfluxState(homog)%state (0_pInt,NofMyHomog), source=0.0_pReal)
deallocate(hydrogenConc (homog)%p)
deallocate(hydrogenConcRate(homog)%p)
allocate (hydrogenConc (homog)%p(1), source=hydrogenflux_initialCh(homog))
allocate (hydrogenConcRate(homog)%p(1), source=0.0_pReal)
endif myhomog
enddo initializeInstances
end subroutine hydrogenflux_isoconc_init
end module hydrogenflux_isoconc

263
src/kinematics_hydrogen_strain.f90
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@ -1,263 +0,0 @@
!--------------------------------------------------------------------------------------------------
!> @author Pratheek Shanthraj, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine incorporating kinematics resulting from interstitial hydrogen
!> @details to be done
!--------------------------------------------------------------------------------------------------
module kinematics_hydrogen_strain
use prec, only: &
pReal, &
pInt
implicit none
private
integer(pInt), dimension(:), allocatable, public, protected :: &
kinematics_hydrogen_strain_sizePostResults, & !< cumulative size of post results
kinematics_hydrogen_strain_offset, & !< which kinematics is my current damage mechanism?
kinematics_hydrogen_strain_instance !< instance of damage kinematics mechanism
integer(pInt), dimension(:,:), allocatable, target, public :: &
kinematics_hydrogen_strain_sizePostResult !< size of each post result output
character(len=64), dimension(:,:), allocatable, target, public :: &
kinematics_hydrogen_strain_output !< name of each post result output
integer(pInt), dimension(:), allocatable, target, public :: &
kinematics_hydrogen_strain_Noutput !< number of outputs per instance of this damage
real(pReal), dimension(:), allocatable, private :: &
kinematics_hydrogen_strain_coeff
public :: &
kinematics_hydrogen_strain_init, &
kinematics_hydrogen_strain_initialStrain, &
kinematics_hydrogen_strain_LiAndItsTangent, &
kinematics_hydrogen_strain_ChemPotAndItsTangent
contains
!--------------------------------------------------------------------------------------------------
!> @brief module initialization
!> @details reads in material parameters, allocates arrays, and does sanity checks
!--------------------------------------------------------------------------------------------------
subroutine kinematics_hydrogen_strain_init(fileUnit)
#if defined(__GFORTRAN__) || __INTEL_COMPILER >= 1800
use, intrinsic :: iso_fortran_env, only: &
compiler_version, &
compiler_options
#endif
use debug, only: &
debug_level,&
debug_constitutive,&
debug_levelBasic
use IO, only: &
IO_read, &
IO_lc, &
IO_getTag, &
IO_isBlank, &
IO_stringPos, &
IO_stringValue, &
IO_floatValue, &
IO_intValue, &
IO_warning, &
IO_error, &
IO_timeStamp, &
IO_EOF
use material, only: &
phase_kinematics, &
phase_Nkinematics, &
phase_Noutput, &
KINEMATICS_hydrogen_strain_label, &
KINEMATICS_hydrogen_strain_ID
use config, only: &
material_Nphase, &
MATERIAL_partPhase
implicit none
integer(pInt), intent(in) :: fileUnit
integer(pInt), allocatable, dimension(:) :: chunkPos
integer(pInt) :: maxNinstance,phase,instance,kinematics
character(len=65536) :: &
tag = '', &
line = ''
write(6,'(/,a)') ' <<<+- kinematics_'//KINEMATICS_hydrogen_strain_LABEL//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
maxNinstance = int(count(phase_kinematics == KINEMATICS_hydrogen_strain_ID),pInt)
if (maxNinstance == 0_pInt) return
if (iand(debug_level(debug_constitutive),debug_levelBasic) /= 0_pInt) &
write(6,'(a16,1x,i5,/)') '# instances:',maxNinstance
allocate(kinematics_hydrogen_strain_offset(material_Nphase), source=0_pInt)
allocate(kinematics_hydrogen_strain_instance(material_Nphase), source=0_pInt)
do phase = 1, material_Nphase
kinematics_hydrogen_strain_instance(phase) = count(phase_kinematics(:,1:phase) == kinematics_hydrogen_strain_ID)
do kinematics = 1, phase_Nkinematics(phase)
if (phase_kinematics(kinematics,phase) == kinematics_hydrogen_strain_ID) &
kinematics_hydrogen_strain_offset(phase) = kinematics
enddo
enddo
allocate(kinematics_hydrogen_strain_sizePostResults(maxNinstance), source=0_pInt)
allocate(kinematics_hydrogen_strain_sizePostResult(maxval(phase_Noutput),maxNinstance),source=0_pInt)
allocate(kinematics_hydrogen_strain_output(maxval(phase_Noutput),maxNinstance))
kinematics_hydrogen_strain_output = ''
allocate(kinematics_hydrogen_strain_Noutput(maxNinstance), source=0_pInt)
allocate(kinematics_hydrogen_strain_coeff(maxNinstance), source=0.0_pReal)
rewind(fileUnit)
phase = 0_pInt
do while (trim(line) /= IO_EOF .and. IO_lc(IO_getTag(line,'<','>')) /= MATERIAL_partPhase) ! wind forward to <phase>
line = IO_read(fileUnit)
enddo
parsingFile: do while (trim(line) /= IO_EOF) ! read through sections of phase part
line = IO_read(fileUnit)
if (IO_isBlank(line)) cycle ! skip empty lines
if (IO_getTag(line,'<','>') /= '') then ! stop at next part
line = IO_read(fileUnit, .true.) ! reset IO_read
exit
endif
if (IO_getTag(line,'[',']') /= '') then ! next phase section
phase = phase + 1_pInt ! advance phase section counter
cycle ! skip to next line
endif
if (phase > 0_pInt ) then; if (any(phase_kinematics(:,phase) == KINEMATICS_hydrogen_strain_ID)) then ! do not short-circuit here (.and. with next if statemen). It's not safe in Fortran
instance = kinematics_hydrogen_strain_instance(phase) ! which instance of my damage is present phase
chunkPos = IO_stringPos(line)
tag = IO_lc(IO_stringValue(line,chunkPos,1_pInt)) ! extract key
select case(tag)
case ('hydrogen_strain_coeff')
kinematics_hydrogen_strain_coeff(instance) = IO_floatValue(line,chunkPos,2_pInt)
end select
endif; endif
enddo parsingFile
end subroutine kinematics_hydrogen_strain_init
!--------------------------------------------------------------------------------------------------
!> @brief report initial hydrogen strain based on current hydrogen conc deviation from
!> equillibrium (0)
!--------------------------------------------------------------------------------------------------
pure function kinematics_hydrogen_strain_initialStrain(ipc, ip, el)
use math, only: &
math_I3
use material, only: &
material_phase, &
material_homog, &
hydrogenConc, &
hydrogenfluxMapping
use lattice, only: &
lattice_equilibriumHydrogenConcentration
implicit none
integer(pInt), intent(in) :: &
ipc, & !< grain number
ip, & !< integration point number
el !< element number
real(pReal), dimension(3,3) :: &
kinematics_hydrogen_strain_initialStrain !< initial thermal strain (should be small strain, though)
integer(pInt) :: &
phase, &
homog, offset, instance
phase = material_phase(ipc,ip,el)
instance = kinematics_hydrogen_strain_instance(phase)
homog = material_homog(ip,el)
offset = hydrogenfluxMapping(homog)%p(ip,el)
kinematics_hydrogen_strain_initialStrain = &
(hydrogenConc(homog)%p(offset) - lattice_equilibriumHydrogenConcentration(phase)) * &
kinematics_hydrogen_strain_coeff(instance)* math_I3
end function kinematics_hydrogen_strain_initialStrain
!--------------------------------------------------------------------------------------------------
!> @brief contains the constitutive equation for calculating the velocity gradient
!--------------------------------------------------------------------------------------------------
subroutine kinematics_hydrogen_strain_LiAndItsTangent(Li, dLi_dTstar3333, ipc, ip, el)
use material, only: &
material_phase, &
material_homog, &
hydrogenConc, &
hydrogenConcRate, &
hydrogenfluxMapping
use math, only: &
math_I3
use lattice, only: &
lattice_equilibriumHydrogenConcentration
implicit none
integer(pInt), intent(in) :: &
ipc, & !< grain number
ip, & !< integration point number
el !< element number
real(pReal), intent(out), dimension(3,3) :: &
Li !< thermal velocity gradient
real(pReal), intent(out), dimension(3,3,3,3) :: &
dLi_dTstar3333 !< derivative of Li with respect to Tstar (4th-order tensor)
integer(pInt) :: &
phase, &
instance, &
homog, offset
real(pReal) :: &
Ch, ChEq, ChDot
phase = material_phase(ipc,ip,el)
instance = kinematics_hydrogen_strain_instance(phase)
homog = material_homog(ip,el)
offset = hydrogenfluxMapping(homog)%p(ip,el)
Ch = hydrogenConc(homog)%p(offset)
ChDot = hydrogenConcRate(homog)%p(offset)
ChEq = lattice_equilibriumHydrogenConcentration(phase)
Li = ChDot*math_I3* &
kinematics_hydrogen_strain_coeff(instance)/ &
(1.0_pReal + kinematics_hydrogen_strain_coeff(instance)*(Ch - ChEq))
dLi_dTstar3333 = 0.0_pReal
end subroutine kinematics_hydrogen_strain_LiAndItsTangent
!--------------------------------------------------------------------------------------------------
!> @brief contains the kinematic contribution to hydrogen chemical potential
!--------------------------------------------------------------------------------------------------
subroutine kinematics_hydrogen_strain_ChemPotAndItsTangent(ChemPot, dChemPot_dCh, Tstar_v, Fi0, Fi, ipc, ip, el)
use material, only: &
material_phase
use math, only: &
math_inv33, &
math_mul33x33, &
math_Mandel6to33, &
math_transpose33
implicit none
integer(pInt), intent(in) :: &
ipc, & !< grain number
ip, & !< integration point number
el !< element number
real(pReal), intent(in), dimension(6) :: &
Tstar_v
real(pReal), intent(in), dimension(3,3) :: &
Fi0, Fi
real(pReal), intent(out) :: &
ChemPot, dChemPot_dCh
integer(pInt) :: &
phase, &
instance
phase = material_phase(ipc,ip,el)
instance = kinematics_hydrogen_strain_instance(phase)
ChemPot = -kinematics_hydrogen_strain_coeff(instance)* &
sum(math_mul33x33(Fi,math_Mandel6to33(Tstar_v))* &
math_mul33x33(math_mul33x33(Fi,math_inv33(Fi0)),Fi))
dChemPot_dCh = 0.0_pReal
end subroutine kinematics_hydrogen_strain_ChemPotAndItsTangent
end module kinematics_hydrogen_strain

264
src/kinematics_vacancy_strain.f90
View File

@ -1,264 +0,0 @@
!--------------------------------------------------------------------------------------------------
!> @author Pratheek Shanthraj, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine incorporating kinematics resulting from vacancy point defects
!> @details to be done
!--------------------------------------------------------------------------------------------------
module kinematics_vacancy_strain
use prec, only: &
pReal, &
pInt
implicit none
private
integer(pInt), dimension(:), allocatable, public, protected :: &
kinematics_vacancy_strain_sizePostResults, & !< cumulative size of post results
kinematics_vacancy_strain_offset, & !< which kinematics is my current damage mechanism?
kinematics_vacancy_strain_instance !< instance of damage kinematics mechanism
integer(pInt), dimension(:,:), allocatable, target, public :: &
kinematics_vacancy_strain_sizePostResult !< size of each post result output
character(len=64), dimension(:,:), allocatable, target, public :: &
kinematics_vacancy_strain_output !< name of each post result output
integer(pInt), dimension(:), allocatable, target, public :: &
kinematics_vacancy_strain_Noutput !< number of outputs per instance of this damage
real(pReal), dimension(:), allocatable, private :: &
kinematics_vacancy_strain_coeff
public :: &
kinematics_vacancy_strain_init, &
kinematics_vacancy_strain_initialStrain, &
kinematics_vacancy_strain_LiAndItsTangent, &
kinematics_vacancy_strain_ChemPotAndItsTangent
contains
!--------------------------------------------------------------------------------------------------
!> @brief module initialization
!> @details reads in material parameters, allocates arrays, and does sanity checks
!--------------------------------------------------------------------------------------------------
subroutine kinematics_vacancy_strain_init(fileUnit)
#if defined(__GFORTRAN__) || __INTEL_COMPILER >= 1800
use, intrinsic :: iso_fortran_env, only: &
compiler_version, &
compiler_options
#endif
use debug, only: &
debug_level,&
debug_constitutive,&
debug_levelBasic
use IO, only: &
IO_read, &
IO_lc, &
IO_getTag, &
IO_isBlank, &
IO_stringPos, &
IO_stringValue, &
IO_floatValue, &
IO_intValue, &
IO_warning, &
IO_error, &
IO_timeStamp, &
IO_EOF
use material, only: &
phase_kinematics, &
phase_Nkinematics, &
phase_Noutput, &
KINEMATICS_vacancy_strain_label, &
KINEMATICS_vacancy_strain_ID
use config, only: &
material_Nphase, &
MATERIAL_partPhase
implicit none
integer(pInt), intent(in) :: fileUnit
integer(pInt), allocatable, dimension(:) :: chunkPos
integer(pInt) :: maxNinstance,phase,instance,kinematics
character(len=65536) :: &
tag = '', &
line = ''
write(6,'(/,a)') ' <<<+- kinematics_'//KINEMATICS_vacancy_strain_LABEL//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
maxNinstance = int(count(phase_kinematics == KINEMATICS_vacancy_strain_ID),pInt)
if (maxNinstance == 0_pInt) return
if (iand(debug_level(debug_constitutive),debug_levelBasic) /= 0_pInt) &
write(6,'(a16,1x,i5,/)') '# instances:',maxNinstance
allocate(kinematics_vacancy_strain_offset(material_Nphase), source=0_pInt)
allocate(kinematics_vacancy_strain_instance(material_Nphase), source=0_pInt)
do phase = 1, material_Nphase
kinematics_vacancy_strain_instance(phase) = count(phase_kinematics(:,1:phase) == kinematics_vacancy_strain_ID)
do kinematics = 1, phase_Nkinematics(phase)
if (phase_kinematics(kinematics,phase) == kinematics_vacancy_strain_ID) &
kinematics_vacancy_strain_offset(phase) = kinematics
enddo
enddo
allocate(kinematics_vacancy_strain_sizePostResults(maxNinstance), source=0_pInt)
allocate(kinematics_vacancy_strain_sizePostResult(maxval(phase_Noutput),maxNinstance),source=0_pInt)
allocate(kinematics_vacancy_strain_output(maxval(phase_Noutput),maxNinstance))
kinematics_vacancy_strain_output = ''
allocate(kinematics_vacancy_strain_Noutput(maxNinstance), source=0_pInt)
allocate(kinematics_vacancy_strain_coeff(maxNinstance), source=0.0_pReal)
rewind(fileUnit)
phase = 0_pInt
do while (trim(line) /= IO_EOF .and. IO_lc(IO_getTag(line,'<','>')) /= MATERIAL_partPhase) ! wind forward to <phase>
line = IO_read(fileUnit)
enddo
parsingFile: do while (trim(line) /= IO_EOF) ! read through sections of phase part
line = IO_read(fileUnit)
if (IO_isBlank(line)) cycle ! skip empty lines
if (IO_getTag(line,'<','>') /= '') then ! stop at next part
line = IO_read(fileUnit, .true.) ! reset IO_read
exit
endif
if (IO_getTag(line,'[',']') /= '') then ! next phase section
phase = phase + 1_pInt ! advance phase section counter
cycle ! skip to next line
endif
if (phase > 0_pInt ) then; if (any(phase_kinematics(:,phase) == KINEMATICS_vacancy_strain_ID)) then ! do not short-circuit here (.and. with next if statemen). It's not safe in Fortran
instance = kinematics_vacancy_strain_instance(phase) ! which instance of my damage is present phase
chunkPos = IO_stringPos(line)
tag = IO_lc(IO_stringValue(line,chunkPos,1_pInt)) ! extract key
select case(tag)
case ('vacancy_strain_coeff')
kinematics_vacancy_strain_coeff(instance) = IO_floatValue(line,chunkPos,2_pInt)
end select
endif; endif
enddo parsingFile
end subroutine kinematics_vacancy_strain_init
!--------------------------------------------------------------------------------------------------
!> @brief report initial vacancy strain based on current vacancy conc deviation from equillibrium
!--------------------------------------------------------------------------------------------------
pure function kinematics_vacancy_strain_initialStrain(ipc, ip, el)
use math, only: &
math_I3
use material, only: &
material_phase, &
material_homog, &
vacancyConc, &
vacancyfluxMapping
use lattice, only: &
lattice_equilibriumVacancyConcentration
implicit none
integer(pInt), intent(in) :: &
ipc, & !< grain number
ip, & !< integration point number
el !< element number
real(pReal), dimension(3,3) :: &
kinematics_vacancy_strain_initialStrain !< initial thermal strain (should be small strain, though)
integer(pInt) :: &
phase, &
homog, offset, instance
phase = material_phase(ipc,ip,el)
instance = kinematics_vacancy_strain_instance(phase)
homog = material_homog(ip,el)
offset = vacancyfluxMapping(homog)%p(ip,el)
kinematics_vacancy_strain_initialStrain = &
(vacancyConc(homog)%p(offset) - lattice_equilibriumVacancyConcentration(phase)) * &
kinematics_vacancy_strain_coeff(instance)* math_I3
end function kinematics_vacancy_strain_initialStrain
!--------------------------------------------------------------------------------------------------
!> @brief contains the constitutive equation for calculating the velocity gradient
!--------------------------------------------------------------------------------------------------
subroutine kinematics_vacancy_strain_LiAndItsTangent(Li, dLi_dTstar3333, ipc, ip, el)
use material, only: &
material_phase, &
material_homog, &
vacancyConc, &
vacancyConcRate, &
vacancyfluxMapping
use math, only: &
math_I3
use lattice, only: &
lattice_equilibriumVacancyConcentration
implicit none
integer(pInt), intent(in) :: &
ipc, & !< grain number
ip, & !< integration point number
el !< element number
real(pReal), intent(out), dimension(3,3) :: &
Li !< thermal velocity gradient
real(pReal), intent(out), dimension(3,3,3,3) :: &
dLi_dTstar3333 !< derivative of Li with respect to Tstar (4th-order tensor)
integer(pInt) :: &
phase, &
instance, &
homog, offset
real(pReal) :: &
Cv, CvEq, CvDot
phase = material_phase(ipc,ip,el)
instance = kinematics_vacancy_strain_instance(phase)
homog = material_homog(ip,el)
offset = vacancyfluxMapping(homog)%p(ip,el)
Cv = vacancyConc(homog)%p(offset)
CvDot = vacancyConcRate(homog)%p(offset)
CvEq = lattice_equilibriumvacancyConcentration(phase)
Li = CvDot*math_I3* &
kinematics_vacancy_strain_coeff(instance)/ &
(1.0_pReal + kinematics_vacancy_strain_coeff(instance)*(Cv - CvEq))
dLi_dTstar3333 = 0.0_pReal
end subroutine kinematics_vacancy_strain_LiAndItsTangent
!--------------------------------------------------------------------------------------------------
!> @brief contains the kinematic contribution to vacancy chemical potential
!--------------------------------------------------------------------------------------------------
subroutine kinematics_vacancy_strain_ChemPotAndItsTangent(ChemPot, dChemPot_dCv, Tstar_v, Fi0, Fi, ipc, ip, el)
use material, only: &
material_phase
use math, only: &
math_inv33, &
math_mul33x33, &
math_Mandel6to33, &
math_transpose33
implicit none
integer(pInt), intent(in) :: &
ipc, & !< grain number
ip, & !< integration point number
el !< element number
real(pReal), intent(in), dimension(6) :: &
Tstar_v
real(pReal), intent(in), dimension(3,3) :: &
Fi0, Fi
real(pReal), intent(out) :: &
ChemPot, dChemPot_dCv
integer(pInt) :: &
phase, &
instance
phase = material_phase(ipc,ip,el)
instance = kinematics_vacancy_strain_instance(phase)
ChemPot = -kinematics_vacancy_strain_coeff(instance)* &
sum(math_mul33x33(Fi,math_Mandel6to33(Tstar_v))* &
math_mul33x33(math_mul33x33(Fi,math_inv33(Fi0)),Fi))
dChemPot_dCv = 0.0_pReal
end subroutine kinematics_vacancy_strain_ChemPotAndItsTangent
end module kinematics_vacancy_strain

174
src/material.f90
View File

@ -36,29 +36,16 @@ module material
SOURCE_damage_isoDuctile_label = 'damage_isoductile', &
SOURCE_damage_anisoBrittle_label = 'damage_anisobrittle', &
SOURCE_damage_anisoDuctile_label = 'damage_anisoductile', &
SOURCE_vacancy_phenoplasticity_label = 'vacancy_phenoplasticity', &
SOURCE_vacancy_irradiation_label = 'vacancy_irradiation', &
SOURCE_vacancy_thermalfluc_label = 'vacancy_thermalfluctuation', &
KINEMATICS_thermal_expansion_label = 'thermal_expansion', &
KINEMATICS_cleavage_opening_label = 'cleavage_opening', &
KINEMATICS_slipplane_opening_label = 'slipplane_opening', &
KINEMATICS_vacancy_strain_label = 'vacancy_strain', &
KINEMATICS_hydrogen_strain_label = 'hydrogen_strain', &
STIFFNESS_DEGRADATION_damage_label = 'damage', &
STIFFNESS_DEGRADATION_porosity_label = 'porosity', &
THERMAL_isothermal_label = 'isothermal', &
THERMAL_adiabatic_label = 'adiabatic', &
THERMAL_conduction_label = 'conduction', &
DAMAGE_none_label = 'none', &
DAMAGE_local_label = 'local', &
DAMAGE_nonlocal_label = 'nonlocal', &
VACANCYFLUX_isoconc_label = 'isoconcentration', &
VACANCYFLUX_isochempot_label = 'isochemicalpotential', &
VACANCYFLUX_cahnhilliard_label = 'cahnhilliard', &
POROSITY_none_label = 'none', &
POROSITY_phasefield_label = 'phasefield', &
HYDROGENFLUX_isoconc_label = 'isoconcentration', &
HYDROGENFLUX_cahnhilliard_label = 'cahnhilliard', &
HOMOGENIZATION_none_label = 'none', &
HOMOGENIZATION_isostrain_label = 'isostrain', &
HOMOGENIZATION_rgc_label = 'rgc'
@ -87,25 +74,19 @@ module material
SOURCE_damage_isoBrittle_ID, &
SOURCE_damage_isoDuctile_ID, &
SOURCE_damage_anisoBrittle_ID, &
SOURCE_damage_anisoDuctile_ID, &
SOURCE_vacancy_phenoplasticity_ID, &
SOURCE_vacancy_irradiation_ID, &
SOURCE_vacancy_thermalfluc_ID
SOURCE_damage_anisoDuctile_ID
end enum
enum, bind(c)
enumerator :: KINEMATICS_undefined_ID, &
KINEMATICS_cleavage_opening_ID, &
KINEMATICS_slipplane_opening_ID, &
KINEMATICS_thermal_expansion_ID, &
KINEMATICS_vacancy_strain_ID, &
KINEMATICS_hydrogen_strain_ID
KINEMATICS_thermal_expansion_ID
end enum
enum, bind(c)
enumerator :: STIFFNESS_DEGRADATION_undefined_ID, &
STIFFNESS_DEGRADATION_damage_ID, &
STIFFNESS_DEGRADATION_porosity_ID
STIFFNESS_DEGRADATION_damage_ID
end enum
enum, bind(c)
@ -120,21 +101,6 @@ module material
DAMAGE_nonlocal_ID
end enum
enum, bind(c)
enumerator :: VACANCYFLUX_isoconc_ID, &
VACANCYFLUX_isochempot_ID, &
VACANCYFLUX_cahnhilliard_ID
end enum
enum, bind(c)
enumerator :: POROSITY_none_ID, &
POROSITY_phasefield_ID
end enum
enum, bind(c)
enumerator :: HYDROGENFLUX_isoconc_ID, &
HYDROGENFLUX_cahnhilliard_ID
end enum
enum, bind(c)
enumerator :: HOMOGENIZATION_undefined_ID, &
HOMOGENIZATION_none_ID, &
@ -150,12 +116,6 @@ module material
thermal_type !< thermal transport model
integer(kind(DAMAGE_none_ID)), dimension(:), allocatable, public, protected :: &
damage_type !< nonlocal damage model
integer(kind(VACANCYFLUX_isoconc_ID)), dimension(:), allocatable, public, protected :: &
vacancyflux_type !< vacancy transport model
integer(kind(POROSITY_none_ID)), dimension(:), allocatable, public, protected :: &
porosity_type !< porosity evolution model
integer(kind(HYDROGENFLUX_isoconc_ID)), dimension(:), allocatable, public, protected :: &
hydrogenflux_type !< hydrogen transport model
integer(kind(SOURCE_undefined_ID)), dimension(:,:), allocatable, public, protected :: &
phase_source, & !< active sources mechanisms of each phase
@ -181,17 +141,11 @@ module material
homogenization_typeInstance, & !< instance of particular type of each homogenization
thermal_typeInstance, & !< instance of particular type of each thermal transport
damage_typeInstance, & !< instance of particular type of each nonlocal damage
vacancyflux_typeInstance, & !< instance of particular type of each vacancy flux
porosity_typeInstance, & !< instance of particular type of each porosity model
hydrogenflux_typeInstance, & !< instance of particular type of each hydrogen flux
microstructure_crystallite !< crystallite setting ID of each microstructure ! DEPRECATED !!!!
real(pReal), dimension(:), allocatable, public, protected :: &
thermal_initialT, & !< initial temperature per each homogenization
damage_initialPhi, & !< initial damage per each homogenization
vacancyflux_initialCv, & !< initial vacancy concentration per each homogenization
porosity_initialPhi, & !< initial posority per each homogenization
hydrogenflux_initialCh !< initial hydrogen concentration per each homogenization
damage_initialPhi !< initial damage per each homogenization
! NEW MAPPINGS
integer(pInt), dimension(:), allocatable, public, protected :: &
@ -221,10 +175,7 @@ module material
type(tState), allocatable, dimension(:), public :: &
homogState, &
thermalState, &
damageState, &
vacancyfluxState, &
porosityState, &
hydrogenfluxState
damageState
integer(pInt), dimension(:,:,:), allocatable, public, protected :: &
material_texture !< texture (index) of each grain,IP,element
@ -274,20 +225,12 @@ module material
type(tHomogMapping), allocatable, dimension(:), public :: &
thermalMapping, & !< mapping for thermal state/fields
damageMapping, & !< mapping for damage state/fields
vacancyfluxMapping, & !< mapping for vacancy conc state/fields
porosityMapping, & !< mapping for porosity state/fields
hydrogenfluxMapping !< mapping for hydrogen conc state/fields
damageMapping !< mapping for damage state/fields
type(group_float), allocatable, dimension(:), public :: &
temperature, & !< temperature field
damage, & !< damage field
vacancyConc, & !< vacancy conc field
porosity, & !< porosity field
hydrogenConc, & !< hydrogen conc field
temperatureRate, & !< temperature change rate field
vacancyConcRate, & !< vacancy conc change field
hydrogenConcRate !< hydrogen conc change field
temperatureRate !< temperature change rate field
public :: &
material_init, &
@ -306,29 +249,16 @@ module material
SOURCE_damage_isoDuctile_ID, &
SOURCE_damage_anisoBrittle_ID, &
SOURCE_damage_anisoDuctile_ID, &
SOURCE_vacancy_phenoplasticity_ID, &
SOURCE_vacancy_irradiation_ID, &
SOURCE_vacancy_thermalfluc_ID, &
KINEMATICS_cleavage_opening_ID, &
KINEMATICS_slipplane_opening_ID, &
KINEMATICS_thermal_expansion_ID, &
KINEMATICS_vacancy_strain_ID, &
KINEMATICS_hydrogen_strain_ID, &
STIFFNESS_DEGRADATION_damage_ID, &
STIFFNESS_DEGRADATION_porosity_ID, &
THERMAL_isothermal_ID, &
THERMAL_adiabatic_ID, &
THERMAL_conduction_ID, &
DAMAGE_none_ID, &
DAMAGE_local_ID, &
DAMAGE_nonlocal_ID, &
VACANCYFLUX_isoconc_ID, &
VACANCYFLUX_isochempot_ID, &
VACANCYFLUX_cahnhilliard_ID, &
POROSITY_none_ID, &
POROSITY_phasefield_ID, &
HYDROGENFLUX_isoconc_ID, &
HYDROGENFLUX_cahnhilliard_ID, &
HOMOGENIZATION_none_ID, &
HOMOGENIZATION_isostrain_ID, &
HOMOGENIZATION_RGC_ID
@ -420,25 +350,14 @@ subroutine material_init()
allocate(homogState (size(config_homogenization)))
allocate(thermalState (size(config_homogenization)))
allocate(damageState (size(config_homogenization)))
allocate(vacancyfluxState (size(config_homogenization)))
allocate(porosityState (size(config_homogenization)))
allocate(hydrogenfluxState (size(config_homogenization)))
allocate(thermalMapping (size(config_homogenization)))
allocate(damageMapping (size(config_homogenization)))
allocate(vacancyfluxMapping (size(config_homogenization)))
allocate(porosityMapping (size(config_homogenization)))
allocate(hydrogenfluxMapping(size(config_homogenization)))
allocate(temperature (size(config_homogenization)))
allocate(damage (size(config_homogenization)))
allocate(vacancyConc (size(config_homogenization)))
allocate(porosity (size(config_homogenization)))
allocate(hydrogenConc (size(config_homogenization)))
allocate(temperatureRate (size(config_homogenization)))
allocate(vacancyConcRate (size(config_homogenization)))
allocate(hydrogenConcRate (size(config_homogenization)))
do m = 1_pInt,size(config_microstructure)
if(microstructure_crystallite(m) < 1_pInt .or. &
@ -511,17 +430,9 @@ subroutine material_init()
do myHomog = 1,size(config_homogenization)
thermalMapping (myHomog)%p => mappingHomogenizationConst
damageMapping (myHomog)%p => mappingHomogenizationConst
vacancyfluxMapping (myHomog)%p => mappingHomogenizationConst
porosityMapping (myHomog)%p => mappingHomogenizationConst
hydrogenfluxMapping(myHomog)%p => mappingHomogenizationConst
allocate(temperature (myHomog)%p(1), source=thermal_initialT(myHomog))
allocate(damage (myHomog)%p(1), source=damage_initialPhi(myHomog))
allocate(vacancyConc (myHomog)%p(1), source=vacancyflux_initialCv(myHomog))
allocate(porosity (myHomog)%p(1), source=porosity_initialPhi(myHomog))
allocate(hydrogenConc (myHomog)%p(1), source=hydrogenflux_initialCh(myHomog))
allocate(temperatureRate (myHomog)%p(1), source=0.0_pReal)
allocate(vacancyConcRate (myHomog)%p(1), source=0.0_pReal)
allocate(hydrogenConcRate(myHomog)%p(1), source=0.0_pReal)
enddo
end subroutine material_init
@ -545,23 +456,14 @@ subroutine material_parseHomogenization
allocate(homogenization_type(size(config_homogenization)), source=HOMOGENIZATION_undefined_ID)
allocate(thermal_type(size(config_homogenization)), source=THERMAL_isothermal_ID)
allocate(damage_type (size(config_homogenization)), source=DAMAGE_none_ID)
allocate(vacancyflux_type(size(config_homogenization)), source=VACANCYFLUX_isoconc_ID)
allocate(porosity_type (size(config_homogenization)), source=POROSITY_none_ID)
allocate(hydrogenflux_type(size(config_homogenization)), source=HYDROGENFLUX_isoconc_ID)
allocate(homogenization_typeInstance(size(config_homogenization)), source=0_pInt)
allocate(thermal_typeInstance(size(config_homogenization)), source=0_pInt)
allocate(damage_typeInstance(size(config_homogenization)), source=0_pInt)
allocate(vacancyflux_typeInstance(size(config_homogenization)), source=0_pInt)
allocate(porosity_typeInstance(size(config_homogenization)), source=0_pInt)
allocate(hydrogenflux_typeInstance(size(config_homogenization)), source=0_pInt)
allocate(homogenization_Ngrains(size(config_homogenization)), source=0_pInt)
allocate(homogenization_Noutput(size(config_homogenization)), source=0_pInt)
allocate(homogenization_active(size(config_homogenization)), source=.false.) !!!!!!!!!!!!!!!
allocate(thermal_initialT(size(config_homogenization)), source=300.0_pReal)
allocate(damage_initialPhi(size(config_homogenization)), source=1.0_pReal)
allocate(vacancyflux_initialCv(size(config_homogenization)), source=0.0_pReal)
allocate(porosity_initialPhi(size(config_homogenization)), source=1.0_pReal)
allocate(hydrogenflux_initialCh(size(config_homogenization)), source=0.0_pReal)
forall (h = 1_pInt:size(config_homogenization)) &
homogenization_active(h) = any(mesh_homogenizationAt == h)
@ -621,62 +523,12 @@ subroutine material_parseHomogenization
endif
if (config_homogenization(h)%keyExists('vacancyflux')) then
vacancyflux_initialCv(h) = config_homogenization(h)%getFloat('cv0',defaultVal=0.0_pReal)
tag = config_homogenization(h)%getString('vacancyflux')
select case (trim(tag))
case(VACANCYFLUX_isoconc_label)
vacancyflux_type(h) = VACANCYFLUX_isoconc_ID
case(VACANCYFLUX_isochempot_label)
vacancyflux_type(h) = VACANCYFLUX_isochempot_ID
case(VACANCYFLUX_cahnhilliard_label)
vacancyflux_type(h) = VACANCYFLUX_cahnhilliard_ID
case default
call IO_error(500_pInt,ext_msg=trim(tag))
end select
endif
if (config_homogenization(h)%keyExists('porosity')) then
!ToDo?
tag = config_homogenization(h)%getString('porosity')
select case (trim(tag))
case(POROSITY_NONE_label)
porosity_type(h) = POROSITY_none_ID
case(POROSITY_phasefield_label)
porosity_type(h) = POROSITY_phasefield_ID
case default
call IO_error(500_pInt,ext_msg=trim(tag))
end select
endif
if (config_homogenization(h)%keyExists('hydrogenflux')) then
hydrogenflux_initialCh(h) = config_homogenization(h)%getFloat('ch0',defaultVal=0.0_pReal)
tag = config_homogenization(h)%getString('hydrogenflux')
select case (trim(tag))
case(HYDROGENFLUX_isoconc_label)
hydrogenflux_type(h) = HYDROGENFLUX_isoconc_ID
case(HYDROGENFLUX_cahnhilliard_label)
hydrogenflux_type(h) = HYDROGENFLUX_cahnhilliard_ID
case default
call IO_error(500_pInt,ext_msg=trim(tag))
end select
endif
enddo
do h=1_pInt, size(config_homogenization)
homogenization_typeInstance(h) = count(homogenization_type(1:h) == homogenization_type(h))
thermal_typeInstance(h) = count(thermal_type (1:h) == thermal_type (h))
damage_typeInstance(h) = count(damage_type (1:h) == damage_type (h))
vacancyflux_typeInstance(h) = count(vacancyflux_type (1:h) == vacancyflux_type (h))
porosity_typeInstance(h) = count(porosity_type (1:h) == porosity_type (h))
hydrogenflux_typeInstance(h) = count(hydrogenflux_type (1:h) == hydrogenflux_type (h))
enddo
homogenization_maxNgrains = maxval(homogenization_Ngrains,homogenization_active)
@ -866,12 +718,6 @@ subroutine material_parsePhase
phase_source(sourceCtr,p) = SOURCE_damage_anisoBrittle_ID
case (SOURCE_damage_anisoDuctile_label)
phase_source(sourceCtr,p) = SOURCE_damage_anisoDuctile_ID
case (SOURCE_vacancy_phenoplasticity_label)
phase_source(sourceCtr,p) = SOURCE_vacancy_phenoplasticity_ID
case (SOURCE_vacancy_irradiation_label)
phase_source(sourceCtr,p) = SOURCE_vacancy_irradiation_ID
case (SOURCE_vacancy_thermalfluc_label)
phase_source(sourceCtr,p) = SOURCE_vacancy_thermalfluc_ID
end select
enddo
@ -890,10 +736,6 @@ subroutine material_parsePhase
phase_kinematics(kinematicsCtr,p) = KINEMATICS_slipplane_opening_ID
case (KINEMATICS_thermal_expansion_label)
phase_kinematics(kinematicsCtr,p) = KINEMATICS_thermal_expansion_ID
case (KINEMATICS_vacancy_strain_label)
phase_kinematics(kinematicsCtr,p) = KINEMATICS_vacancy_strain_ID
case (KINEMATICS_hydrogen_strain_label)
phase_kinematics(kinematicsCtr,p) = KINEMATICS_hydrogen_strain_ID
end select
enddo
#if defined(__GFORTRAN__)
@ -907,8 +749,6 @@ subroutine material_parsePhase
select case (trim(str(stiffDegradationCtr)))
case (STIFFNESS_DEGRADATION_damage_label)
phase_stiffnessDegradation(stiffDegradationCtr,p) = STIFFNESS_DEGRADATION_damage_ID
case (STIFFNESS_DEGRADATION_porosity_label)
phase_stiffnessDegradation(stiffDegradationCtr,p) = STIFFNESS_DEGRADATION_porosity_ID
end select
enddo
enddo

2
src/math.f90
View File

@ -2617,7 +2617,7 @@ end function math_rotate_forward3333
!> @brief limits a scalar value to a certain range (either one or two sided)
! Will return NaN if left > right
!--------------------------------------------------------------------------------------------------
real(pReal) pure function math_clip(a, left, right)
real(pReal) pure elemental function math_clip(a, left, right)
use, intrinsic :: &
IEEE_arithmetic

1862
src/plastic_disloUCLA.f90
View File

File diff suppressed because it is too large Load Diff

595
src/plastic_isotropic.f90
View File

@ -1,8 +1,9 @@
!--------------------------------------------------------------------------------------------------
!> @author Franz Roters, Max-Planck-Institut für Eisenforschung GmbH
!> @author Philip Eisenlohr, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine for isotropic (ISOTROPIC) plasticity
!> @details Isotropic (ISOTROPIC) Plasticity which resembles the phenopowerlaw plasticity without
!> @author Martin Diehl, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine for isotropic plasticity
!> @details Isotropic Plasticity which resembles the phenopowerlaw plasticity without
!! resolving the stress on the slip systems. Will give the response of phenopowerlaw for an
!! untextured polycrystal
!--------------------------------------------------------------------------------------------------
@ -14,53 +15,54 @@ module plastic_isotropic
implicit none
private
integer(pInt), dimension(:,:), allocatable, target, public :: &
plastic_isotropic_sizePostResult !< size of each post result output
plastic_isotropic_sizePostResult !< size of each post result output
character(len=64), dimension(:,:), allocatable, target, public :: &
plastic_isotropic_output !< name of each post result output
integer(pInt), dimension(:), allocatable, target, public :: &
plastic_isotropic_Noutput !< number of outputs per instance
plastic_isotropic_output !< name of each post result output
enum, bind(c)
enumerator :: undefined_ID, &
flowstress_ID, &
strainrate_ID
enumerator :: &
undefined_ID, &
flowstress_ID, &
strainrate_ID
end enum
type, private :: tParameters !< container type for internal constitutive parameters
integer(kind(undefined_ID)), allocatable, dimension(:) :: &
outputID
real(pReal) :: &
fTaylor, &
tau0, &
gdot0, &
n, &
type, private :: tParameters
real(pReal) :: &
fTaylor, & !< Taylor factor
tau0, & !< initial critical stress
gdot0, & !< reference strain rate
n, & !< stress exponent
h0, &
h0_slopeLnRate, &
tausat, &
tausat, & !< maximum critical stress
a, &
aTolFlowstress, &
aTolShear, &
tausat_SinhFitA, &
tausat_SinhFitB, &
tausat_SinhFitC, &
tausat_SinhFitD
logical :: &
tausat_SinhFitD, &
aTolFlowstress, &
aTolShear
integer(pInt) :: &
of_debug = 0_pInt
integer(kind(undefined_ID)), allocatable, dimension(:) :: &
outputID
logical :: &
dilatation
end type
type(tParameters), dimension(:), allocatable, target, private :: param !< containers of constitutive parameters (len Ninstance)
type(tParameters), dimension(:), allocatable, private :: param !< containers of constitutive parameters (len Ninstance)
type, private :: tIsotropicState !< internal state aliases
real(pReal), pointer, dimension(:) :: & ! scalars along NipcMyInstance
type, private :: tIsotropicState
real(pReal), pointer, dimension(:) :: &
flowstress, &
accumulatedShear
end type
type(tIsotropicState), allocatable, dimension(:), private :: & !< state aliases per instance
state, &
dotState
type(tIsotropicState), allocatable, dimension(:), private :: &
dotState, &
state
public :: &
public :: &
plastic_isotropic_init, &
plastic_isotropic_LpAndItsTangent, &
plastic_isotropic_LiAndItsTangent, &
@ -80,20 +82,29 @@ subroutine plastic_isotropic_init()
compiler_version, &
compiler_options
#endif
use IO
use prec, only: &
pStringLen
use debug, only: &
#ifdef DEBUG
debug_e, &
debug_i, &
debug_g, &
debug_levelExtensive, &
#endif
debug_level, &
debug_constitutive, &
debug_constitutive,&
debug_levelBasic
use numerics, only: &
numerics_integrator
use math, only: &
math_Mandel3333to66, &
math_Voigt66to3333
use IO, only: &
IO_error, &
IO_timeStamp
use material, only: &
#ifdef DEBUG
phasememberAt, &
#endif
phase_plasticity, &
phase_plasticityInstance, &
phase_Noutput, &
material_allocatePlasticState, &
PLASTICITY_ISOTROPIC_label, &
PLASTICITY_ISOTROPIC_ID, &
material_phase, &
@ -101,148 +112,140 @@ use IO
use config, only: &
MATERIAL_partPhase, &
config_phase
use lattice
implicit none
type(tParameters), pointer :: prm
integer(pInt) :: &
phase, &
instance, &
maxNinstance, &
sizeDotState, &
sizeState, &
sizeDeltaState
character(len=65536) :: &
extmsg = ''
integer(pInt) :: NipcMyPhase,i
character(len=65536), dimension(:), allocatable :: outputs
Ninstance, &
p, i, &
NipcMyPhase, &
sizeState, sizeDotState
write(6,'(/,a)') ' <<<+- constitutive_'//PLASTICITY_ISOTROPIC_label//' init -+>>>'
character(len=65536), dimension(0), parameter :: emptyStringArray = [character(len=65536)::]
integer(kind(undefined_ID)) :: &
outputID
character(len=pStringLen) :: &
extmsg = ''
character(len=65536), dimension(:), allocatable :: &
outputs
write(6,'(/,a)') ' <<<+- plastic_'//PLASTICITY_ISOTROPIC_label//' init -+>>>'
write(6,'(/,a)') ' Maiti and Eisenlohr, Scripta Materialia, 145:37-40, 2018'
write(6,'(/,a)') ' https://doi.org/10.1016/j.scriptamat.2017.09.047'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
maxNinstance = int(count(phase_plasticity == PLASTICITY_ISOTROPIC_ID),pInt)
Ninstance = int(count(phase_plasticity == PLASTICITY_ISOTROPIC_ID),pInt)
if (iand(debug_level(debug_constitutive),debug_levelBasic) /= 0_pInt) &
write(6,'(a16,1x,i5,/)') '# instances:',maxNinstance
write(6,'(a16,1x,i5,/)') '# instances:',Ninstance
! public variables
allocate(plastic_isotropic_sizePostResult(maxval(phase_Noutput), maxNinstance),source=0_pInt)
allocate(plastic_isotropic_output(maxval(phase_Noutput), maxNinstance))
allocate(plastic_isotropic_sizePostResult(maxval(phase_Noutput), Ninstance),source=0_pInt)
allocate(plastic_isotropic_output(maxval(phase_Noutput), Ninstance))
plastic_isotropic_output = ''
allocate(plastic_isotropic_Noutput(maxNinstance), source=0_pInt)
allocate(param(maxNinstance)) ! one container of parameters per instance
allocate(state(maxNinstance)) ! internal state aliases
allocate(dotState(maxNinstance))
allocate(param(Ninstance))
allocate(state(Ninstance))
allocate(dotState(Ninstance))
do phase = 1_pInt, size(phase_plasticityInstance)
if (phase_plasticity(phase) == PLASTICITY_ISOTROPIC_ID) then
instance = phase_plasticityInstance(phase)
prm => param(instance) ! shorthand pointer to parameter object of my constitutive law
prm%tau0 = config_phase(phase)%getFloat('tau0')
prm%tausat = config_phase(phase)%getFloat('tausat')
prm%gdot0 = config_phase(phase)%getFloat('gdot0')
prm%n = config_phase(phase)%getFloat('n')
prm%h0 = config_phase(phase)%getFloat('h0')
prm%fTaylor = config_phase(phase)%getFloat('m')
prm%h0_slopeLnRate = config_phase(phase)%getFloat('h0_slopelnrate', defaultVal=0.0_pReal)
prm%tausat_SinhFitA = config_phase(phase)%getFloat('tausat_sinhfita',defaultVal=0.0_pReal)
prm%tausat_SinhFitB = config_phase(phase)%getFloat('tausat_sinhfitb',defaultVal=0.0_pReal)
prm%tausat_SinhFitC = config_phase(phase)%getFloat('tausat_sinhfitc',defaultVal=0.0_pReal)
prm%tausat_SinhFitD = config_phase(phase)%getFloat('tausat_sinhfitd',defaultVal=0.0_pReal)
prm%a = config_phase(phase)%getFloat('a')
prm%aTolFlowStress = config_phase(phase)%getFloat('atol_flowstress',defaultVal=1.0_pReal)
prm%aTolShear = config_phase(phase)%getFloat('atol_shear',defaultVal=1.0e-6_pReal)
do p = 1_pInt, size(phase_plasticityInstance)
if (phase_plasticity(p) /= PLASTICITY_ISOTROPIC_ID) cycle
associate(prm => param(phase_plasticityInstance(p)), &
dot => dotState(phase_plasticityInstance(p)), &
stt => state(phase_plasticityInstance(p)), &
config => config_phase(p))
prm%dilatation = config_phase(phase)%keyExists('/dilatation/')
#if defined(__GFORTRAN__)
outputs = ['GfortranBug86277']
outputs = config_phase(phase)%getStrings('(output)',defaultVal=outputs)
if (outputs(1) == 'GfortranBug86277') outputs = [character(len=65536)::]
#else
outputs = config_phase(phase)%getStrings('(output)',defaultVal=[character(len=65536)::])
#ifdef DEBUG
if (p==material_phase(debug_g,debug_i,debug_e)) then
prm%of_debug = phasememberAt(debug_g,debug_i,debug_e)
endif
#endif
allocate(prm%outputID(0))
do i=1_pInt, size(outputs)
select case(outputs(i))
case ('flowstress')
plastic_isotropic_Noutput(instance) = plastic_isotropic_Noutput(instance) + 1_pInt
plastic_isotropic_output(plastic_isotropic_Noutput(instance),instance) = outputs(i)
plasticState(phase)%sizePostResults = plasticState(phase)%sizePostResults + 1_pInt
plastic_isotropic_sizePostResult(i,instance) = 1_pInt
prm%outputID = [prm%outputID,flowstress_ID]
case ('strainrate')
plastic_isotropic_Noutput(instance) = plastic_isotropic_Noutput(instance) + 1_pInt
plastic_isotropic_output(plastic_isotropic_Noutput(instance),instance) = outputs(i)
plasticState(phase)%sizePostResults = &
plasticState(phase)%sizePostResults + 1_pInt
plastic_isotropic_sizePostResult(i,instance) = 1_pInt
prm%outputID = [prm%outputID,strainrate_ID]
end select
enddo
prm%tau0 = config%getFloat('tau0')
prm%tausat = config%getFloat('tausat')
prm%gdot0 = config%getFloat('gdot0')
prm%n = config%getFloat('n')
prm%h0 = config%getFloat('h0')
prm%fTaylor = config%getFloat('m')
prm%h0_slopeLnRate = config%getFloat('h0_slopelnrate', defaultVal=0.0_pReal)
prm%tausat_SinhFitA = config%getFloat('tausat_sinhfita',defaultVal=0.0_pReal)
prm%tausat_SinhFitB = config%getFloat('tausat_sinhfitb',defaultVal=0.0_pReal)
prm%tausat_SinhFitC = config%getFloat('tausat_sinhfitc',defaultVal=0.0_pReal)
prm%tausat_SinhFitD = config%getFloat('tausat_sinhfitd',defaultVal=0.0_pReal)
prm%a = config%getFloat('a')
prm%aTolFlowStress = config%getFloat('atol_flowstress',defaultVal=1.0_pReal)
prm%aTolShear = config%getFloat('atol_shear', defaultVal=1.0e-6_pReal)
prm%dilatation = config%keyExists('/dilatation/')
!--------------------------------------------------------------------------------------------------
! sanity checks
extmsg = ''
if (prm%aTolShear <= 0.0_pReal) extmsg = trim(extmsg)//"'aTolShear' "
if (prm%tau0 < 0.0_pReal) extmsg = trim(extmsg)//"'tau0' "
if (prm%gdot0 <= 0.0_pReal) extmsg = trim(extmsg)//"'gdot0' "
if (prm%n <= 0.0_pReal) extmsg = trim(extmsg)//"'n' "
if (prm%tausat <= prm%tau0) extmsg = trim(extmsg)//"'tausat' "
if (prm%a <= 0.0_pReal) extmsg = trim(extmsg)//"'a' "
if (prm%fTaylor <= 0.0_pReal) extmsg = trim(extmsg)//"'m' "
if (prm%aTolFlowstress <= 0.0_pReal) extmsg = trim(extmsg)//"'atol_flowstress' "
if (extmsg /= '') call IO_error(211_pInt,ip=instance,&
ext_msg=trim(extmsg)//'('//PLASTICITY_ISOTROPIC_label//')')
extmsg = ''
if (prm%aTolShear <= 0.0_pReal) extmsg = trim(extmsg)//'aTolShear '
if (prm%tau0 < 0.0_pReal) extmsg = trim(extmsg)//'tau0 '
if (prm%gdot0 <= 0.0_pReal) extmsg = trim(extmsg)//'gdot0 '
if (prm%n <= 0.0_pReal) extmsg = trim(extmsg)//'n '
if (prm%tausat <= prm%tau0) extmsg = trim(extmsg)//'tausat '
if (prm%a <= 0.0_pReal) extmsg = trim(extmsg)//'a '
if (prm%fTaylor <= 0.0_pReal) extmsg = trim(extmsg)//'m '
if (prm%aTolFlowstress <= 0.0_pReal) extmsg = trim(extmsg)//'atol_flowstress '
if (prm%aTolShear <= 0.0_pReal) extmsg = trim(extmsg)//'atol_shear '
!--------------------------------------------------------------------------------------------------
! exit if any parameter is out of range
if (extmsg /= '') &
call IO_error(211_pInt,ext_msg=trim(extmsg)//'('//PLASTICITY_ISOTROPIC_label//')')
!--------------------------------------------------------------------------------------------------
! output pararameters
outputs = config%getStrings('(output)',defaultVal=emptyStringArray)
allocate(prm%outputID(0))
do i=1_pInt, size(outputs)
outputID = undefined_ID
select case(outputs(i))
case ('flowstress')
outputID = flowstress_ID
case ('strainrate')
outputID = strainrate_ID
end select
if (outputID /= undefined_ID) then
plastic_isotropic_output(i,phase_plasticityInstance(p)) = outputs(i)
plastic_isotropic_sizePostResult(i,phase_plasticityInstance(p)) = 1_pInt
prm%outputID = [prm%outputID , outputID]
endif
end do
!--------------------------------------------------------------------------------------------------
! allocate state arrays
NipcMyPhase = count(material_phase == phase) ! number of own material points (including point components ipc)
NipcMyPhase = count(material_phase == p)
sizeState = size(["flowstress ","accumulated_shear"])
sizeDotState = sizeState
sizeDotState = size(["flowstress ","accumulated_shear"])
sizeDeltaState = 0_pInt ! no sudden jumps in state
sizeState = sizeDotState + sizeDeltaState
plasticState(phase)%sizeState = sizeState
plasticState(phase)%sizeDotState = sizeDotState
plasticState(phase)%sizeDeltaState = sizeDeltaState
plasticState(phase)%nSlip = 1
allocate(plasticState(phase)%aTolState ( sizeState))
allocate(plasticState(phase)%state0 ( sizeState,NipcMyPhase),source=0.0_pReal)
allocate(plasticState(phase)%partionedState0 ( sizeState,NipcMyPhase),source=0.0_pReal)
allocate(plasticState(phase)%subState0 ( sizeState,NipcMyPhase),source=0.0_pReal)
allocate(plasticState(phase)%state ( sizeState,NipcMyPhase),source=0.0_pReal)
allocate(plasticState(phase)%dotState (sizeDotState,NipcMyPhase),source=0.0_pReal)
allocate(plasticState(phase)%deltaState (sizeDeltaState,NipcMyPhase),source=0.0_pReal)
if (any(numerics_integrator == 1_pInt)) then
allocate(plasticState(phase)%previousDotState (sizeDotState,NipcMyPhase),source=0.0_pReal)
allocate(plasticState(phase)%previousDotState2(sizeDotState,NipcMyPhase),source=0.0_pReal)
endif
if (any(numerics_integrator == 4_pInt)) &
allocate(plasticState(phase)%RK4dotState (sizeDotState,NipcMyPhase),source=0.0_pReal)
if (any(numerics_integrator == 5_pInt)) &
allocate(plasticState(phase)%RKCK45dotState (6,sizeDotState,NipcMyPhase),source=0.0_pReal)
call material_allocatePlasticState(p,NipcMyPhase,sizeState,sizeDotState,0_pInt, &
1_pInt,0_pInt,0_pInt)
plasticState(p)%sizePostResults = sum(plastic_isotropic_sizePostResult(:,phase_plasticityInstance(p)))
!--------------------------------------------------------------------------------------------------
! locally defined state aliases and initialization of state0 and aTolState
stt%flowstress => plasticState(p)%state (1,1:NipcMyPhase)
stt%flowstress = prm%tau0
dot%flowstress => plasticState(p)%dotState (1,1:NipcMyPhase)
plasticState(p)%aTolState(1) = prm%aTolFlowstress
state(instance)%flowstress => plasticState(phase)%state (1,1:NipcMyPhase)
dotState(instance)%flowstress => plasticState(phase)%dotState (1,1:NipcMyPhase)
plasticState(phase)%state0(1,1:NipcMyPhase) = prm%tau0
plasticState(phase)%aTolState(1) = prm%aTolFlowstress
stt%accumulatedShear => plasticState(p)%state (2,1:NipcMyPhase)
dot%accumulatedShear => plasticState(p)%dotState (2,1:NipcMyPhase)
plasticState(p)%aTolState(2) = prm%aTolShear
! global alias
plasticState(p)%slipRate => plasticState(p)%dotState(2:2,1:NipcMyPhase)
plasticState(p)%accumulatedSlip => plasticState(p)%state (2:2,1:NipcMyPhase)
state(instance)%accumulatedShear => plasticState(phase)%state (2,1:NipcMyPhase)
dotState(instance)%accumulatedShear => plasticState(phase)%dotState (2,1:NipcMyPhase)
plasticState(phase)%state0 (2,1:NipcMyPhase) = 0.0_pReal
plasticState(phase)%aTolState(2) = prm%aTolShear
! global alias
plasticState(phase)%slipRate => plasticState(phase)%dotState(2:2,1:NipcMyPhase)
plasticState(phase)%accumulatedSlip => plasticState(phase)%state (2:2,1:NipcMyPhase)
plasticState(p)%state0 = plasticState(p)%state ! ToDo: this could be done centrally
end associate
endif
enddo
end subroutine plastic_isotropic_init
@ -251,309 +254,235 @@ end subroutine plastic_isotropic_init
!--------------------------------------------------------------------------------------------------
!> @brief calculates plastic velocity gradient and its tangent
!--------------------------------------------------------------------------------------------------
subroutine plastic_isotropic_LpAndItsTangent(Lp,dLp_dTstar99,Tstar_v,ipc,ip,el)
subroutine plastic_isotropic_LpAndItsTangent(Lp,dLp_dMp,Mp,instance,of)
#ifdef DEBUG
use debug, only: &
debug_level, &
debug_constitutive, &
debug_levelBasic, &
debug_constitutive,&
debug_levelExtensive, &
debug_levelSelective, &
debug_e, &
debug_i, &
debug_g
debug_levelSelective
#endif
use math, only: &
math_mul6x6, &
math_Mandel6to33, &
math_Plain3333to99, &
math_deviatoric33, &
math_mul33xx33
use material, only: &
phasememberAt, &
material_phase, &
phase_plasticityInstance
implicit none
real(pReal), dimension(3,3), intent(out) :: &
real(pReal), dimension(3,3), intent(out) :: &
Lp !< plastic velocity gradient
real(pReal), dimension(9,9), intent(out) :: &
dLp_dTstar99 !< derivative of Lp with respect to 2nd Piola Kirchhoff stress
real(pReal), dimension(3,3,3,3), intent(out) :: &
dLp_dMp !< derivative of Lp with respect to the Mandel stress
real(pReal), dimension(6), intent(in) :: &
Tstar_v !< 2nd Piola Kirchhoff stress tensor in Mandel notation
real(pReal), dimension(3,3), intent(in) :: &
Mp !< Mandel stress
integer(pInt), intent(in) :: &
ipc, & !< component-ID of integration point
ip, & !< integration point
el !< element
type(tParameters), pointer :: prm
instance, &
of
real(pReal), dimension(3,3) :: &
Tstar_dev_33 !< deviatoric part of the 2nd Piola Kirchhoff stress tensor as 2nd order tensor
real(pReal), dimension(3,3,3,3) :: &
dLp_dTstar_3333 !< derivative of Lp with respect to Tstar as 4th order tensor
Mp_dev !< deviatoric part of the Mandel stress
real(pReal) :: &
gamma_dot, & !< strainrate
norm_Tstar_dev, & !< euclidean norm of Tstar_dev
squarenorm_Tstar_dev !< square of the euclidean norm of Tstar_dev
norm_Mp_dev, & !< norm of the deviatoric part of the Mandel stress
squarenorm_Mp_dev !< square of the norm of the deviatoric part of the Mandel stress
integer(pInt) :: &
instance, of, &
k, l, m, n
of = phasememberAt(ipc,ip,el) ! phasememberAt should be tackled by material and be renamed to material_phasemember
instance = phase_plasticityInstance(material_phase(ipc,ip,el))
prm => param(instance)
associate(prm => param(instance), stt => state(instance))
Tstar_dev_33 = math_deviatoric33(math_Mandel6to33(Tstar_v)) ! deviatoric part of 2nd Piola-Kirchhoff stress
squarenorm_Tstar_dev = math_mul33xx33(Tstar_dev_33,Tstar_dev_33)
norm_Tstar_dev = sqrt(squarenorm_Tstar_dev)
Mp_dev = math_deviatoric33(Mp)
squarenorm_Mp_dev = math_mul33xx33(Mp_dev,Mp_dev)
norm_Mp_dev = sqrt(squarenorm_Mp_dev)
if (norm_Tstar_dev <= 0.0_pReal) then ! Tstar == 0 --> both Lp and dLp_dTstar are zero
Lp = 0.0_pReal
dLp_dTstar99 = 0.0_pReal
else
gamma_dot = prm%gdot0 &
* ( sqrt(1.5_pReal) * norm_Tstar_dev / prm%fTaylor / state(instance)%flowstress(of) ) &
**prm%n
Lp = Tstar_dev_33/norm_Tstar_dev * gamma_dot/prm%fTaylor
if (norm_Mp_dev > 0.0_pReal) then
gamma_dot = prm%gdot0 * (sqrt(1.5_pReal) * norm_Mp_dev/(prm%fTaylor*stt%flowstress(of))) **prm%n
Lp = Mp_dev/norm_Mp_dev * gamma_dot/prm%fTaylor
#ifdef DEBUG
if (iand(debug_level(debug_constitutive), debug_levelExtensive) /= 0_pInt &
.and. ((el == debug_e .and. ip == debug_i .and. ipc == debug_g) &
.or. .not. iand(debug_level(debug_constitutive),debug_levelSelective) /= 0_pInt)) then
write(6,'(a,i8,1x,i2,1x,i3)') '<< CONST isotropic >> at el ip g ',el,ip,ipc
.and. (of == prm%of_debug .or. .not. iand(debug_level(debug_constitutive),debug_levelSelective) /= 0_pInt)) then
write(6,'(/,a,/,3(12x,3(f12.4,1x)/))') '<< CONST isotropic >> Tstar (dev) / MPa', &
transpose(Tstar_dev_33(1:3,1:3))*1.0e-6_pReal
write(6,'(/,a,/,f12.5)') '<< CONST isotropic >> norm Tstar / MPa', norm_Tstar_dev*1.0e-6_pReal
transpose(Mp_dev)*1.0e-6_pReal
write(6,'(/,a,/,f12.5)') '<< CONST isotropic >> norm Tstar / MPa', norm_Mp_dev*1.0e-6_pReal
write(6,'(/,a,/,f12.5)') '<< CONST isotropic >> gdot', gamma_dot
end if
!--------------------------------------------------------------------------------------------------
! Calculation of the tangent of Lp
#endif
forall (k=1_pInt:3_pInt,l=1_pInt:3_pInt,m=1_pInt:3_pInt,n=1_pInt:3_pInt) &
dLp_dTstar_3333(k,l,m,n) = (prm%n-1.0_pReal) * &
Tstar_dev_33(k,l)*Tstar_dev_33(m,n) / squarenorm_Tstar_dev
dLp_dMp(k,l,m,n) = (prm%n-1.0_pReal) * Mp_dev(k,l)*Mp_dev(m,n) / squarenorm_Mp_dev
forall (k=1_pInt:3_pInt,l=1_pInt:3_pInt) &
dLp_dTstar_3333(k,l,k,l) = dLp_dTstar_3333(k,l,k,l) + 1.0_pReal
dLp_dMp(k,l,k,l) = dLp_dMp(k,l,k,l) + 1.0_pReal
forall (k=1_pInt:3_pInt,m=1_pInt:3_pInt) &
dLp_dTstar_3333(k,k,m,m) = dLp_dTstar_3333(k,k,m,m) - 1.0_pReal/3.0_pReal
dLp_dTstar99 = math_Plain3333to99(gamma_dot / prm%fTaylor * &
dLp_dTstar_3333 / norm_Tstar_dev)
dLp_dMp(k,k,m,m) = dLp_dMp(k,k,m,m) - 1.0_pReal/3.0_pReal
dLp_dMp = gamma_dot / prm%fTaylor * dLp_dMp / norm_Mp_dev
else
Lp = 0.0_pReal
dLp_dMp = 0.0_pReal
end if
end associate
end subroutine plastic_isotropic_LpAndItsTangent
!--------------------------------------------------------------------------------------------------
!> @brief calculates plastic velocity gradient and its tangent
! ToDo: Rename Tstar to Mi?
!--------------------------------------------------------------------------------------------------
subroutine plastic_isotropic_LiAndItsTangent(Li,dLi_dTstar_3333,Tstar_v,ipc,ip,el)
subroutine plastic_isotropic_LiAndItsTangent(Li,dLi_dTstar,Tstar,instance,of)
use math, only: &
math_mul6x6, &
math_Mandel6to33, &
math_Plain3333to99, &
math_spherical33, &
math_mul33xx33
use material, only: &
phasememberAt, &
material_phase, &
phase_plasticityInstance
implicit none
real(pReal), dimension(3,3), intent(out) :: &
Li !< plastic velocity gradient
Li !< inleastic velocity gradient
real(pReal), dimension(3,3,3,3), intent(out) :: &
dLi_dTstar_3333 !< derivative of Li with respect to Tstar as 4th order tensor
real(pReal), dimension(6), intent(in) :: &
Tstar_v !< 2nd Piola Kirchhoff stress tensor in Mandel notation
integer(pInt), intent(in) :: &
ipc, & !< component-ID of integration point
ip, & !< integration point
el !< element
dLi_dTstar !< derivative of Li with respect to the Mandel stress
type(tParameters), pointer :: prm
real(pReal), dimension(3,3), intent(in) :: &
Tstar !< Mandel stress ToDo: Mi?
integer(pInt), intent(in) :: &
instance, &
of
real(pReal), dimension(3,3) :: &
Tstar_sph_33 !< sphiatoric part of the 2nd Piola Kirchhoff stress tensor as 2nd order tensor
Tstar_sph !< sphiatoric part of the Mandel stress
real(pReal) :: &
gamma_dot, & !< strainrate
norm_Tstar_sph, & !< euclidean norm of Tstar_sph
squarenorm_Tstar_sph !< square of the euclidean norm of Tstar_sph
integer(pInt) :: &
instance, of, &
k, l, m, n
of = phasememberAt(ipc,ip,el) ! phasememberAt should be tackled by material and be renamed to material_phasemember
instance = phase_plasticityInstance(material_phase(ipc,ip,el))
prm => param(instance)
associate(prm => param(instance), stt => state(instance))
Tstar_sph_33 = math_spherical33(math_Mandel6to33(Tstar_v)) ! spherical part of 2nd Piola-Kirchhoff stress
squarenorm_Tstar_sph = math_mul33xx33(Tstar_sph_33,Tstar_sph_33)
Tstar_sph = math_spherical33(Tstar)
squarenorm_Tstar_sph = math_mul33xx33(Tstar_sph,Tstar_sph)
norm_Tstar_sph = sqrt(squarenorm_Tstar_sph)
if (prm%dilatation .and. norm_Tstar_sph > 0.0_pReal) then ! Tstar == 0 or J2 plascitiy --> both Li and dLi_dTstar are zero
gamma_dot = prm%gdot0 &
* (sqrt(1.5_pReal) * norm_Tstar_sph / prm%fTaylor / state(instance)%flowstress(of) ) &
**prm%n
if (prm%dilatation .and. norm_Tstar_sph > 0.0_pReal) then ! no stress or J2 plastitiy --> Li and its derivative are zero
gamma_dot = prm%gdot0 * (sqrt(1.5_pReal) * norm_Tstar_sph /(prm%fTaylor*stt%flowstress(of))) **prm%n
Li = Tstar_sph_33/norm_Tstar_sph * gamma_dot/prm%fTaylor
!--------------------------------------------------------------------------------------------------
! Calculation of the tangent of Li
Li = Tstar_sph/norm_Tstar_sph * gamma_dot/prm%fTaylor
forall (k=1_pInt:3_pInt,l=1_pInt:3_pInt,m=1_pInt:3_pInt,n=1_pInt:3_pInt) &
dLi_dTstar_3333(k,l,m,n) = (prm%n-1.0_pReal) * &
Tstar_sph_33(k,l)*Tstar_sph_33(m,n) / squarenorm_Tstar_sph
dLi_dTstar(k,l,m,n) = (prm%n-1.0_pReal) * Tstar_sph(k,l)*Tstar_sph(m,n) / squarenorm_Tstar_sph
forall (k=1_pInt:3_pInt,l=1_pInt:3_pInt) &
dLi_dTstar_3333(k,l,k,l) = dLi_dTstar_3333(k,l,k,l) + 1.0_pReal
dLi_dTstar(k,l,k,l) = dLi_dTstar(k,l,k,l) + 1.0_pReal
dLi_dTstar_3333 = gamma_dot / prm%fTaylor * &
dLi_dTstar_3333 / norm_Tstar_sph
dLi_dTstar = gamma_dot / prm%fTaylor * dLi_dTstar / norm_Tstar_sph
else
Li = 0.0_pReal
dLi_dTstar_3333 = 0.0_pReal
Li = 0.0_pReal
dLi_dTstar = 0.0_pReal
endif
end associate
end subroutine plastic_isotropic_LiAndItsTangent
!--------------------------------------------------------------------------------------------------
!> @brief calculates the rate of change of microstructure
!--------------------------------------------------------------------------------------------------
subroutine plastic_isotropic_dotState(Tstar_v,ipc,ip,el)
subroutine plastic_isotropic_dotState(Mp,instance,of)
use prec, only: &
dEq0
use math, only: &
math_mul6x6
use material, only: &
phasememberAt, &
material_phase, &
phase_plasticityInstance
math_mul33xx33, &
math_deviatoric33
implicit none
real(pReal), dimension(6), intent(in):: &
Tstar_v !< 2nd Piola Kirchhoff stress tensor in Mandel notation
integer(pInt), intent(in) :: &
ipc, & !< component-ID of integration point
ip, & !< integration point
el !< element
type(tParameters), pointer :: prm
real(pReal), dimension(6) :: &
Tstar_dev_v !< deviatoric 2nd Piola Kirchhoff stress tensor in Mandel notation
real(pReal), dimension(3,3), intent(in) :: &
Mp !< Mandel stress
integer(pInt), intent(in) :: &
instance, &
of
real(pReal) :: &
gamma_dot, & !< strainrate
hardening, & !< hardening coefficient
saturation, & !< saturation flowstress
norm_Tstar_v !< euclidean norm of Tstar_dev
integer(pInt) :: &
instance, & !< instance of my instance (unique number of my constitutive model)
of !< shortcut notation for offset position in state array
norm_Mp !< norm of the (deviatoric) Mandel stress
of = phasememberAt(ipc,ip,el) ! phasememberAt should be tackled by material and be renamed to material_phasemember
instance = phase_plasticityInstance(material_phase(ipc,ip,el))
prm => param(instance)
associate(prm => param(instance), stt => state(instance), dot => dotState(instance))
!--------------------------------------------------------------------------------------------------
! norm of (deviatoric) 2nd Piola-Kirchhoff stress
if (prm%dilatation) then
norm_Tstar_v = sqrt(math_mul6x6(Tstar_v,Tstar_v))
norm_Mp = sqrt(math_mul33xx33(Mp,Mp))
else
Tstar_dev_v(1:3) = Tstar_v(1:3) - sum(Tstar_v(1:3))/3.0_pReal
Tstar_dev_v(4:6) = Tstar_v(4:6)
norm_Tstar_v = sqrt(math_mul6x6(Tstar_dev_v,Tstar_dev_v))
end if
!--------------------------------------------------------------------------------------------------
! strain rate
gamma_dot = prm%gdot0 * ( sqrt(1.5_pReal) * norm_Tstar_v &
/ &!-----------------------------------------------------------------------------------
(prm%fTaylor*state(instance)%flowstress(of) ))**prm%n
norm_Mp = sqrt(math_mul33xx33(math_deviatoric33(Mp),math_deviatoric33(Mp)))
endif
gamma_dot = prm%gdot0 * (sqrt(1.5_pReal) * norm_Mp /(prm%fTaylor*stt%flowstress(of))) **prm%n
!--------------------------------------------------------------------------------------------------
! hardening coefficient
if (abs(gamma_dot) > 1e-12_pReal) then
if (dEq0(prm%tausat_SinhFitA)) then
saturation = prm%tausat
else
saturation = prm%tausat &
+ asinh( (gamma_dot / prm%tausat_SinhFitA&
)**(1.0_pReal / prm%tausat_SinhFitD)&
+ asinh( (gamma_dot / prm%tausat_SinhFitA)**(1.0_pReal / prm%tausat_SinhFitD) &
)**(1.0_pReal / prm%tausat_SinhFitC) &
/ ( prm%tausat_SinhFitB &
* (gamma_dot / prm%gdot0)**(1.0_pReal / prm%n) &
)
/ prm%tausat_SinhFitB * (gamma_dot / prm%gdot0)**(1.0_pReal / prm%n)
endif
hardening = ( prm%h0 + prm%h0_slopeLnRate * log(gamma_dot) ) &
* abs( 1.0_pReal - state(instance)%flowstress(of)/saturation )**prm%a &
* sign(1.0_pReal, 1.0_pReal - state(instance)%flowstress(of)/saturation)
* abs( 1.0_pReal - stt%flowstress(of)/saturation )**prm%a &
* sign(1.0_pReal, 1.0_pReal - stt%flowstress(of)/saturation)
else
hardening = 0.0_pReal
endif
dotState(instance)%flowstress (of) = hardening * gamma_dot
dotState(instance)%accumulatedShear(of) = gamma_dot
dot%flowstress (of) = hardening * gamma_dot
dot%accumulatedShear(of) = gamma_dot
end associate
end subroutine plastic_isotropic_dotState
!--------------------------------------------------------------------------------------------------
!> @brief return array of constitutive results
!--------------------------------------------------------------------------------------------------
function plastic_isotropic_postResults(Tstar_v,ipc,ip,el)
function plastic_isotropic_postResults(Mp,instance,of) result(postResults)
use math, only: &
math_mul6x6
use material, only: &
plasticState, &
material_phase, &
phasememberAt, &
phase_plasticityInstance
math_mul33xx33, &
math_deviatoric33
implicit none
real(pReal), dimension(6), intent(in) :: &
Tstar_v !< 2nd Piola Kirchhoff stress tensor in Mandel notation
integer(pInt), intent(in) :: &
ipc, & !< component-ID of integration point
ip, & !< integration point
el !< element
real(pReal), dimension(3,3), intent(in) :: &
Mp !< Mandel stress
integer(pInt), intent(in) :: &
instance, &
of
type(tParameters), pointer :: prm
real(pReal), dimension(sum(plastic_isotropic_sizePostResult(:,instance))) :: &
postResults
real(pReal), dimension(plasticState(material_phase(ipc,ip,el))%sizePostResults) :: &
plastic_isotropic_postResults
real(pReal), dimension(6) :: &
Tstar_dev_v !< deviatoric 2nd Piola Kirchhoff stress tensor in Mandel notation
real(pReal) :: &
norm_Tstar_v ! euclidean norm of Tstar_dev
norm_Mp !< norm of the Mandel stress
integer(pInt) :: &
instance, & !< instance of my instance (unique number of my constitutive model)
of, & !< shortcut notation for offset position in state array
c, &
o
o,c
of = phasememberAt(ipc,ip,el) ! phasememberAt should be tackled by material and be renamed to material_phasemember
instance = phase_plasticityInstance(material_phase(ipc,ip,el))
prm => param(instance)
associate(prm => param(instance), stt => state(instance))
!--------------------------------------------------------------------------------------------------
! norm of (deviatoric) 2nd Piola-Kirchhoff stress
if (prm%dilatation) then
norm_Tstar_v = sqrt(math_mul6x6(Tstar_v,Tstar_v))
norm_Mp = sqrt(math_mul33xx33(Mp,Mp))
else
Tstar_dev_v(1:3) = Tstar_v(1:3) - sum(Tstar_v(1:3))/3.0_pReal
Tstar_dev_v(4:6) = Tstar_v(4:6)
norm_Tstar_v = sqrt(math_mul6x6(Tstar_dev_v,Tstar_dev_v))
end if
norm_Mp = sqrt(math_mul33xx33(math_deviatoric33(Mp),math_deviatoric33(Mp)))
endif
c = 0_pInt
plastic_isotropic_postResults = 0.0_pReal
outputsLoop: do o = 1_pInt,plastic_isotropic_Noutput(instance)
outputsLoop: do o = 1_pInt,size(prm%outputID)
select case(prm%outputID(o))
case (flowstress_ID)
plastic_isotropic_postResults(c+1_pInt) = state(instance)%flowstress(of)
postResults(c+1_pInt) = stt%flowstress(of)
c = c + 1_pInt
case (strainrate_ID)
plastic_isotropic_postResults(c+1_pInt) = &
prm%gdot0 * ( sqrt(1.5_pReal) * norm_Tstar_v &
/ &!----------------------------------------------------------------------------------
(prm%fTaylor * state(instance)%flowstress(of)) ) ** prm%n
postResults(c+1_pInt) = prm%gdot0 &
* (sqrt(1.5_pReal) * norm_Mp /(prm%fTaylor * stt%flowstress(of)))**prm%n
c = c + 1_pInt
end select
enddo outputsLoop
end associate
end function plastic_isotropic_postResults

2
src/plastic_none.f90
View File

@ -48,7 +48,7 @@ subroutine plastic_none_init
phase, &
NofMyPhase
write(6,'(/,a)') ' <<<+- constitutive_'//PLASTICITY_NONE_label//' init -+>>>'
write(6,'(/,a)') ' <<<+- plastic_'//PLASTICITY_NONE_label//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"

401
src/plastic_phenopowerlaw.f90
View File

@ -24,12 +24,10 @@ module plastic_phenopowerlaw
accumulatedshear_slip_ID, &
shearrate_slip_ID, &
resolvedstress_slip_ID, &
totalshear_ID, &
resistance_twin_ID, &
accumulatedshear_twin_ID, &
shearrate_twin_ID, &
resolvedstress_twin_ID, &
totalvolfrac_twin_ID
resolvedstress_twin_ID
end enum
type, private :: tParameters
@ -55,7 +53,7 @@ module plastic_phenopowerlaw
xi_twin_0, & !< initial critical shear stress for twin
xi_slip_sat, & !< maximum critical shear stress for slip
nonSchmidCoeff, &
H_int, & !< per family hardening activity (optional) !ToDo: Better name!
H_int, & !< per family hardening activity (optional)
gamma_twin_char !< characteristic shear for twins
real(pReal), allocatable, dimension(:,:) :: &
interaction_SlipSlip, & !< slip resistance from slip activity
@ -80,15 +78,11 @@ module plastic_phenopowerlaw
type(tParameters), dimension(:), allocatable, private :: param !< containers of constitutive parameters (len Ninstance)
type, private :: tPhenopowerlawState
real(pReal), pointer, dimension(:) :: &
sumGamma, & ! ToDo: why not make a dependent state?
sumF ! ToDo: why not make a dependent state?
real(pReal), pointer, dimension(:,:) :: &
xi_slip, &
xi_twin, &
gamma_slip, &
gamma_twin, &
whole
gamma_twin
end type
type(tPhenopowerlawState), allocatable, dimension(:), private :: &
@ -100,6 +94,9 @@ module plastic_phenopowerlaw
plastic_phenopowerlaw_LpAndItsTangent, &
plastic_phenopowerlaw_dotState, &
plastic_phenopowerlaw_postResults
private :: &
kinetics_slip, &
kinetics_twin
contains
@ -115,8 +112,7 @@ subroutine plastic_phenopowerlaw_init
compiler_options
#endif
use prec, only: &
pStringLen, &
dEq0
pStringLen
use debug, only: &
debug_level, &
debug_constitutive,&
@ -124,7 +120,6 @@ subroutine plastic_phenopowerlaw_init
use math, only: &
math_expand
use IO, only: &
IO_warning, &
IO_error, &
IO_timeStamp
use material, only: &
@ -153,22 +148,16 @@ subroutine plastic_phenopowerlaw_init
real(pReal), dimension(0), parameter :: emptyRealArray = [real(pReal)::]
character(len=65536), dimension(0), parameter :: emptyStringArray = [character(len=65536)::]
type(tParameters) :: &
prm
type(tPhenopowerlawState) :: &
stt, &
dot
integer(kind(undefined_ID)) :: &
outputID !< ID of each post result output
outputID
character(len=pStringLen) :: &
structure = '',&
extmsg = ''
character(len=65536), dimension(:), allocatable :: &
outputs
outputs
write(6,'(/,a)') ' <<<+- constitutive_'//PLASTICITY_PHENOPOWERLAW_label//' init -+>>>'
write(6,'(/,a)') ' <<<+- plastic_'//PLASTICITY_PHENOPOWERLAW_label//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
@ -188,20 +177,21 @@ subroutine plastic_phenopowerlaw_init
if (phase_plasticity(p) /= PLASTICITY_PHENOPOWERLAW_ID) cycle
associate(prm => param(phase_plasticityInstance(p)), &
dot => dotState(phase_plasticityInstance(p)), &
stt => state(phase_plasticityInstance(p)))
stt => state(phase_plasticityInstance(p)), &
config => config_phase(p))
structure = config_phase(p)%getString('lattice_structure')
structure = config%getString('lattice_structure')
!--------------------------------------------------------------------------------------------------
! optional parameters that need to be defined
prm%twinB = config_phase(p)%getFloat('twin_b',defaultVal=1.0_pReal)
prm%twinC = config_phase(p)%getFloat('twin_c',defaultVal=0.0_pReal)
prm%twinD = config_phase(p)%getFloat('twin_d',defaultVal=0.0_pReal)
prm%twinE = config_phase(p)%getFloat('twin_e',defaultVal=0.0_pReal)
prm%twinB = config%getFloat('twin_b',defaultVal=1.0_pReal)
prm%twinC = config%getFloat('twin_c',defaultVal=0.0_pReal)
prm%twinD = config%getFloat('twin_d',defaultVal=0.0_pReal)
prm%twinE = config%getFloat('twin_e',defaultVal=0.0_pReal)
prm%aTolResistance = config_phase(p)%getFloat('atol_resistance',defaultVal=1.0_pReal)
prm%aTolShear = config_phase(p)%getFloat('atol_shear', defaultVal=1.0e-6_pReal)
prm%aTolTwinfrac = config_phase(p)%getFloat('atol_twinfrac', defaultVal=1.0e-6_pReal)
prm%aTolResistance = config%getFloat('atol_resistance',defaultVal=1.0_pReal)
prm%aTolShear = config%getFloat('atol_shear', defaultVal=1.0e-6_pReal)
prm%aTolTwinfrac = config%getFloat('atol_twinfrac', defaultVal=1.0e-6_pReal)
! sanity checks
if (prm%aTolResistance <= 0.0_pReal) extmsg = trim(extmsg)//'aTolresistance '
@ -210,14 +200,14 @@ subroutine plastic_phenopowerlaw_init
!--------------------------------------------------------------------------------------------------
! slip related parameters
prm%Nslip = config_phase(p)%getInts('nslip',defaultVal=emptyIntArray)
prm%Nslip = config%getInts('nslip',defaultVal=emptyIntArray)
prm%totalNslip = sum(prm%Nslip)
slipActive: if (prm%totalNslip > 0_pInt) then
prm%Schmid_slip = lattice_SchmidMatrix_slip(prm%Nslip,structure(1:3),&
config_phase(p)%getFloat('c/a',defaultVal=0.0_pReal))
config%getFloat('c/a',defaultVal=0.0_pReal))
if(structure=='bcc') then
prm%nonSchmidCoeff = config_phase(p)%getFloats('nonschmid_coefficients',&
defaultVal = emptyRealArray)
prm%nonSchmidCoeff = config%getFloats('nonschmid_coefficients',&
defaultVal = emptyRealArray)
prm%nonSchmid_pos = lattice_nonSchmidMatrix(prm%Nslip,prm%nonSchmidCoeff,+1_pInt)
prm%nonSchmid_neg = lattice_nonSchmidMatrix(prm%Nslip,prm%nonSchmidCoeff,-1_pInt)
else
@ -225,18 +215,18 @@ subroutine plastic_phenopowerlaw_init
prm%nonSchmid_neg = prm%Schmid_slip
endif
prm%interaction_SlipSlip = lattice_interaction_SlipSlip(prm%Nslip, &
config_phase(p)%getFloats('interaction_slipslip'), &
config%getFloats('interaction_slipslip'), &
structure(1:3))
prm%xi_slip_0 = config_phase(p)%getFloats('tau0_slip', requiredShape=shape(prm%Nslip))
prm%xi_slip_sat = config_phase(p)%getFloats('tausat_slip', requiredShape=shape(prm%Nslip))
prm%H_int = config_phase(p)%getFloats('h_int', requiredShape=shape(prm%Nslip), &
defaultVal=[(0.0_pReal,i=1_pInt,size(prm%Nslip))])
prm%xi_slip_0 = config%getFloats('tau0_slip', requiredSize=size(prm%Nslip))
prm%xi_slip_sat = config%getFloats('tausat_slip', requiredSize=size(prm%Nslip))
prm%H_int = config%getFloats('h_int', requiredSize=size(prm%Nslip), &
defaultVal=[(0.0_pReal,i=1_pInt,size(prm%Nslip))])
prm%gdot0_slip = config_phase(p)%getFloat('gdot0_slip')
prm%n_slip = config_phase(p)%getFloat('n_slip')
prm%a_slip = config_phase(p)%getFloat('a_slip')
prm%h0_SlipSlip = config_phase(p)%getFloat('h0_slipslip')
prm%gdot0_slip = config%getFloat('gdot0_slip')
prm%n_slip = config%getFloat('n_slip')
prm%a_slip = config%getFloat('a_slip')
prm%h0_SlipSlip = config%getFloat('h0_slipslip')
! expand: family => system
prm%xi_slip_0 = math_expand(prm%xi_slip_0, prm%Nslip)
@ -244,9 +234,9 @@ subroutine plastic_phenopowerlaw_init
prm%H_int = math_expand(prm%H_int, prm%Nslip)
! sanity checks
if (prm%gdot0_slip <= 0.0_pReal) extmsg = trim(extmsg)//'gdot0_slip '
if (dEq0(prm%a_slip)) extmsg = trim(extmsg)//'a_slip ' ! ToDo: negative values ok?
if (dEq0(prm%n_slip)) extmsg = trim(extmsg)//'n_slip ' ! ToDo: negative values ok?
if (prm%gdot0_slip <= 0.0_pReal) extmsg = trim(extmsg)//'gdot0_slip '
if (prm%a_slip <= 0.0_pReal) extmsg = trim(extmsg)//'a_slip '
if (prm%n_slip <= 0.0_pReal) extmsg = trim(extmsg)//'n_slip '
if (any(prm%xi_slip_0 <= 0.0_pReal)) extmsg = trim(extmsg)//'xi_slip_0 '
if (any(prm%xi_slip_sat < prm%xi_slip_0)) extmsg = trim(extmsg)//'xi_slip_sat '
else slipActive
@ -256,47 +246,48 @@ subroutine plastic_phenopowerlaw_init
!--------------------------------------------------------------------------------------------------
! twin related parameters
prm%Ntwin = config_phase(p)%getInts('ntwin', defaultVal=emptyIntArray)
prm%Ntwin = config%getInts('ntwin', defaultVal=emptyIntArray)
prm%totalNtwin = sum(prm%Ntwin)
twinActive: if (prm%totalNtwin > 0_pInt) then
prm%Schmid_twin = lattice_SchmidMatrix_twin(prm%Ntwin,structure(1:3),&
config_phase(p)%getFloat('c/a',defaultVal=0.0_pReal))
config%getFloat('c/a',defaultVal=0.0_pReal))
prm%interaction_TwinTwin = lattice_interaction_TwinTwin(prm%Ntwin,&
config_phase(p)%getFloats('interaction_twintwin'), &
config%getFloats('interaction_twintwin'), &
structure(1:3))
prm%gamma_twin_char = lattice_characteristicShear_twin(prm%Ntwin,structure(1:3),&
config_phase(p)%getFloat('c/a'))
config%getFloat('c/a'))
prm%xi_twin_0 = config_phase(p)%getFloats('tau0_twin',requiredShape=shape(prm%Ntwin))
prm%xi_twin_0 = config%getFloats('tau0_twin',requiredSize=size(prm%Ntwin))
prm%gdot0_twin = config_phase(p)%getFloat('gdot0_twin')
prm%n_twin = config_phase(p)%getFloat('n_twin')
prm%spr = config_phase(p)%getFloat('s_pr')
prm%h0_TwinTwin = config_phase(p)%getFloat('h0_twintwin')
prm%gdot0_twin = config%getFloat('gdot0_twin')
prm%n_twin = config%getFloat('n_twin')
prm%spr = config%getFloat('s_pr')
prm%h0_TwinTwin = config%getFloat('h0_twintwin')
! expand: family => system
prm%xi_twin_0 = math_expand(prm%xi_twin_0, prm%Ntwin)
! sanity checks
if (prm%gdot0_twin <= 0.0_pReal) extmsg = trim(extmsg)//'gdot0_twin '
if (dEq0(prm%n_twin)) extmsg = trim(extmsg)//'n_twin ' ! ToDo: negative values ok?
if (prm%n_twin <= 0.0_pReal) extmsg = trim(extmsg)//'n_twin '
else twinActive
allocate(prm%interaction_TwinTwin(0,0))
allocate(prm%xi_twin_0(0))
allocate(prm%gamma_twin_char(0))
endif twinActive
!--------------------------------------------------------------------------------------------------
! slip-twin related parameters
slipAndTwinActive: if (prm%totalNslip > 0_pInt .and. prm%totalNtwin > 0_pInt) then
prm%interaction_SlipTwin = lattice_interaction_SlipTwin(prm%Nslip,prm%Ntwin,&
config_phase(p)%getFloats('interaction_sliptwin'), &
config%getFloats('interaction_sliptwin'), &
structure(1:3))
prm%interaction_TwinSlip = lattice_interaction_TwinSlip(prm%Ntwin,prm%Nslip,&
config_phase(p)%getFloats('interaction_twinslip'), &
config%getFloats('interaction_twinslip'), &
structure(1:3))
else slipAndTwinActive
allocate(prm%interaction_SlipTwin(prm%totalNslip,prm%TotalNtwin)) ! at least one dimension is 0
allocate(prm%interaction_TwinSlip(prm%totalNtwin,prm%TotalNslip)) ! at least one dimension is 0
allocate(prm%interaction_SlipTwin(prm%totalNslip,prm%TotalNtwin)) ! at least one dimension is 0
allocate(prm%interaction_TwinSlip(prm%totalNtwin,prm%TotalNslip)) ! at least one dimension is 0
prm%h0_TwinSlip = 0.0_pReal
endif slipAndTwinActive
@ -307,7 +298,7 @@ subroutine plastic_phenopowerlaw_init
!--------------------------------------------------------------------------------------------------
! output pararameters
outputs = config_phase(p)%getStrings('(output)',defaultVal=emptyStringArray)
outputs = config%getStrings('(output)',defaultVal=emptyStringArray)
allocate(prm%outputID(0))
do i=1_pInt, size(outputs)
outputID = undefined_ID
@ -338,12 +329,6 @@ subroutine plastic_phenopowerlaw_init
outputID = merge(resolvedstress_twin_ID,undefined_ID,prm%totalNtwin>0_pInt)
outputSize = prm%totalNtwin
case ('totalshear')
outputID = merge(totalshear_ID,undefined_ID,prm%totalNslip>0_pInt)
outputSize = 1_pInt
case ('totalvolfrac_twin')
outputID = merge(totalvolfrac_twin_ID,undefined_ID,prm%totalNtwin>0_pInt)
outputSize = 1_pInt
end select
if (outputID /= undefined_ID) then
@ -356,17 +341,15 @@ subroutine plastic_phenopowerlaw_init
!--------------------------------------------------------------------------------------------------
! allocate state arrays
NipcMyPhase = count(material_phase == p) ! number of IPCs containing my phase
NipcMyPhase = count(material_phase == p)
sizeState = size(['tau_slip ','gamma_slip']) * prm%TotalNslip &
+ size(['tau_twin ','gamma_twin']) * prm%TotalNtwin &
+ size(['sum(gamma)','sum(f) ']) ! ToDo: only needed if either twin or slip active!
+ size(['tau_twin ','gamma_twin']) * prm%TotalNtwin
sizeDotState = sizeState
call material_allocatePlasticState(p,NipcMyPhase,sizeState,sizeDotState,0_pInt, &
prm%totalNslip,prm%totalNtwin,0_pInt)
plasticState(p)%sizePostResults = sum(plastic_phenopowerlaw_sizePostResult(:,phase_plasticityInstance(p)))
!--------------------------------------------------------------------------------------------------
! locally defined state aliases and initialization of state0 and aTolState
startIndex = 1_pInt
@ -383,18 +366,6 @@ subroutine plastic_phenopowerlaw_init
dot%xi_twin => plasticState(p)%dotState(startIndex:endIndex,:)
plasticState(p)%aTolState(startIndex:endIndex) = prm%aTolResistance
startIndex = endIndex + 1_pInt
endIndex = endIndex + 1_pInt
stt%sumGamma => plasticState(p)%state (startIndex,:)
dot%sumGamma => plasticState(p)%dotState(startIndex,:)
plasticState(p)%aTolState(startIndex:endIndex) = prm%aTolShear
startIndex = endIndex + 1_pInt
endIndex = endIndex + 1_pInt
stt%sumF=>plasticState(p)%state (startIndex,:)
dot%sumF=>plasticState(p)%dotState(startIndex,:)
plasticState(p)%aTolState(startIndex:endIndex) = prm%aTolTwinFrac
startIndex = endIndex + 1_pInt
endIndex = endIndex + prm%totalNslip
stt%gamma_slip => plasticState(p)%state (startIndex:endIndex,:)
@ -410,8 +381,7 @@ subroutine plastic_phenopowerlaw_init
dot%gamma_twin => plasticState(p)%dotState(startIndex:endIndex,:)
plasticState(p)%aTolState(startIndex:endIndex) = prm%aTolShear
plasticState(p)%state0 = plasticState(p)%state ! ToDo: this could be done centrally
dot%whole => plasticState(p)%dotState
plasticState(p)%state0 = plasticState(p)%state ! ToDo: this could be done centrally
end associate
enddo
@ -421,11 +391,13 @@ end subroutine plastic_phenopowerlaw_init
!--------------------------------------------------------------------------------------------------
!> @brief calculates plastic velocity gradient and its tangent
!> @details asumme that deformation by dislocation glide affects twinned and untwinned volume
! equally (Taylor assumption). Twinning happens only in untwinned volume (
!--------------------------------------------------------------------------------------------------
subroutine plastic_phenopowerlaw_LpAndItsTangent(Lp,dLp_dMp,Mp,instance,of)
implicit none
real(pReal), dimension(3,3), intent(out) :: &
real(pReal), dimension(3,3), intent(out) :: &
Lp !< plastic velocity gradient
real(pReal), dimension(3,3,3,3), intent(out) :: &
dLp_dMp !< derivative of Lp with respect to the Mandel stress
@ -444,32 +416,29 @@ subroutine plastic_phenopowerlaw_LpAndItsTangent(Lp,dLp_dMp,Mp,instance,of)
real(pReal), dimension(param(instance)%totalNtwin) :: &
gdot_twin,dgdot_dtautwin
type(tParameters) :: prm
type(tPhenopowerlawState) :: stt
associate(prm => param(instance), stt => state(instance))
Lp = 0.0_pReal
dLp_dMp = 0.0_pReal
call kinetics_slip(prm,stt,of,Mp,gdot_slip_pos,gdot_slip_neg,dgdot_dtauslip_pos,dgdot_dtauslip_neg)
associate(prm => param(instance))
call kinetics_slip(Mp,instance,of,gdot_slip_pos,gdot_slip_neg,dgdot_dtauslip_pos,dgdot_dtauslip_neg)
slipSystems: do i = 1_pInt, prm%totalNslip
Lp = Lp + (1.0_pReal-stt%sumF(of))*(gdot_slip_pos(i)+gdot_slip_neg(i))*prm%Schmid_slip(1:3,1:3,i)
Lp = Lp + (gdot_slip_pos(i)+gdot_slip_neg(i))*prm%Schmid_slip(1:3,1:3,i)
forall (k=1_pInt:3_pInt,l=1_pInt:3_pInt,m=1_pInt:3_pInt,n=1_pInt:3_pInt) &
dLp_dMp(k,l,m,n) = dLp_dMp(k,l,m,n) &
+ dgdot_dtauslip_pos(i) * prm%Schmid_slip(k,l,i) * prm%nonSchmid_pos(m,n,i) &
+ dgdot_dtauslip_neg(i) * prm%Schmid_slip(k,l,i) * prm%nonSchmid_neg(m,n,i)
enddo slipSystems
call kinetics_twin(prm,stt,of,Mp,gdot_twin,dgdot_dtautwin)
call kinetics_twin(Mp,instance,of,gdot_twin,dgdot_dtautwin)
twinSystems: do i = 1_pInt, prm%totalNtwin
Lp = Lp + gdot_twin(i)*prm%Schmid_twin(1:3,1:3,i)
forall (k=1_pInt:3_pInt,l=1_pInt:3_pInt,m=1_pInt:3_pInt,n=1_pInt:3_pInt) &
dLp_dMp(k,l,m,n) = dLp_dMp(k,l,m,n) &
+ dgdot_dtautwin(i)*prm%Schmid_twin(k,l,i)*prm%Schmid_twin(m,n,i)
enddo twinSystems
end associate
end associate
end subroutine plastic_phenopowerlaw_LpAndItsTangent
@ -482,7 +451,7 @@ subroutine plastic_phenopowerlaw_dotState(Mp,instance,of)
implicit none
real(pReal), dimension(3,3), intent(in) :: &
Mp !< Mandel stress
integer(pInt), intent(in) :: &
integer(pInt), intent(in) :: &
instance, &
of
@ -490,47 +459,41 @@ subroutine plastic_phenopowerlaw_dotState(Mp,instance,of)
i
real(pReal) :: &
c_SlipSlip,c_TwinSlip,c_TwinTwin, &
xi_slip_sat_offset
xi_slip_sat_offset,&
sumGamma,sumF
real(pReal), dimension(param(instance)%totalNslip) :: &
left_SlipSlip,right_SlipSlip, &
gdot_slip_pos,gdot_slip_neg
type(tParameters) :: prm
type(tPhenopowerlawState) :: dot,stt
associate(prm => param(instance), stt => state(instance), dot => dotState(instance))
dot%whole(:,of) = 0.0_pReal
sumGamma = sum(stt%gamma_slip(:,of))
sumF = sum(stt%gamma_twin(:,of)/prm%gamma_twin_char)
!--------------------------------------------------------------------------------------------------
! system-independent (nonlinear) prefactors to M_Xx (X influenced by x) matrices
c_SlipSlip = prm%h0_slipslip * (1.0_pReal + prm%twinC*stt%sumF(of)** prm%twinB)
c_TwinSlip = prm%h0_TwinSlip * stt%sumGamma(of)**prm%twinE
c_TwinTwin = prm%h0_TwinTwin * stt%sumF(of)**prm%twinD
c_SlipSlip = prm%h0_slipslip * (1.0_pReal + prm%twinC*sumF** prm%twinB)
c_TwinSlip = prm%h0_TwinSlip * sumGamma**prm%twinE
c_TwinTwin = prm%h0_TwinTwin * sumF**prm%twinD
!--------------------------------------------------------------------------------------------------
! calculate left and right vectors
left_SlipSlip = 1.0_pReal + prm%H_int
xi_slip_sat_offset = prm%spr*sqrt(stt%sumF(of))
xi_slip_sat_offset = prm%spr*sqrt(sumF)
right_SlipSlip = abs(1.0_pReal-stt%xi_slip(:,of) / (prm%xi_slip_sat+xi_slip_sat_offset)) **prm%a_slip &
* sign(1.0_pReal,1.0_pReal-stt%xi_slip(:,of) / (prm%xi_slip_sat+xi_slip_sat_offset))
!--------------------------------------------------------------------------------------------------
! shear rates
call kinetics_slip(prm,stt,of,Mp,gdot_slip_pos,gdot_slip_neg)
call kinetics_slip(Mp,instance,of,gdot_slip_pos,gdot_slip_neg)
dot%gamma_slip(:,of) = abs(gdot_slip_pos+gdot_slip_neg)
dot%sumGamma(of) = sum(dot%gamma_slip(:,of))
call kinetics_twin(prm,stt,of,Mp,dot%gamma_twin(:,of))
if (prm%totalNtwin > 0_pInt) dot%sumF(of) = merge(sum(dot%gamma_twin(:,of)/prm%gamma_twin_char), &
0.0_pReal, &
stt%sumF(of) < 0.98_pReal)
call kinetics_twin(Mp,instance,of,dot%gamma_twin(:,of))
!--------------------------------------------------------------------------------------------------
! hardening
hardeningSlip: do i = 1_pInt, prm%totalNslip
dot%xi_slip(i,of) = dot_product(prm%interaction_SlipSlip(i,:),right_SlipSlip*dot%gamma_slip(:,of)) &
* c_SlipSlip * left_SlipSlip(i) &
* c_SlipSlip * left_SlipSlip(i) &
+ dot_product(prm%interaction_SlipTwin(i,:),dot%gamma_twin(:,of))
enddo hardeningSlip
@ -545,39 +508,108 @@ end subroutine plastic_phenopowerlaw_dotState
!--------------------------------------------------------------------------------------------------
!> @brief calculates shear rates on slip systems and derivatives with respect to resolved stress
!> @details: Shear rates are calculated only optionally. NOTE: Against the common convention, the
!> result (i.e. intent(out)) variables are the last to have the optional arguments at the end
!> @brief return array of constitutive results
!--------------------------------------------------------------------------------------------------
pure subroutine kinetics_slip(prm,stt,of,Mp,gdot_slip_pos,gdot_slip_neg, &
dgdot_dtau_slip_pos,dgdot_dtau_slip_neg)
function plastic_phenopowerlaw_postResults(Mp,instance,of) result(postResults)
use math, only: &
math_mul33xx33
implicit none
real(pReal), dimension(3,3), intent(in) :: &
Mp !< Mandel stress
integer(pInt), intent(in) :: &
instance, &
of
real(pReal), dimension(sum(plastic_phenopowerlaw_sizePostResult(:,instance))) :: &
postResults
integer(pInt) :: &
o,c,i
real(pReal), dimension(param(instance)%totalNslip) :: &
gdot_slip_pos,gdot_slip_neg
c = 0_pInt
associate( prm => param(instance), stt => state(instance))
outputsLoop: do o = 1_pInt,size(prm%outputID)
select case(prm%outputID(o))
case (resistance_slip_ID)
postResults(c+1_pInt:c+prm%totalNslip) = stt%xi_slip(1:prm%totalNslip,of)
c = c + prm%totalNslip
case (accumulatedshear_slip_ID)
postResults(c+1_pInt:c+prm%totalNslip) = stt%gamma_slip(1:prm%totalNslip,of)
c = c + prm%totalNslip
case (shearrate_slip_ID)
call kinetics_slip(Mp,instance,of,gdot_slip_pos,gdot_slip_neg)
postResults(c+1_pInt:c+prm%totalNslip) = gdot_slip_pos+gdot_slip_neg
c = c + prm%totalNslip
case (resolvedstress_slip_ID)
do i = 1_pInt, prm%totalNslip
postResults(c+i) = math_mul33xx33(Mp,prm%Schmid_slip(1:3,1:3,i))
enddo
c = c + prm%totalNslip
case (resistance_twin_ID)
postResults(c+1_pInt:c+prm%totalNtwin) = stt%xi_twin(1:prm%totalNtwin,of)
c = c + prm%totalNtwin
case (accumulatedshear_twin_ID)
postResults(c+1_pInt:c+prm%totalNtwin) = stt%gamma_twin(1:prm%totalNtwin,of)
c = c + prm%totalNtwin
case (shearrate_twin_ID)
call kinetics_twin(Mp,instance,of,postResults(c+1_pInt:c+prm%totalNtwin))
c = c + prm%totalNtwin
case (resolvedstress_twin_ID)
do i = 1_pInt, prm%totalNtwin
postResults(c+i) = math_mul33xx33(Mp,prm%Schmid_twin(1:3,1:3,i))
enddo
c = c + prm%totalNtwin
end select
enddo outputsLoop
end associate
end function plastic_phenopowerlaw_postResults
!--------------------------------------------------------------------------------------------------
!> @brief Shear rates on slip systems and their derivatives with respect to resolved stress
!> @details Derivatives are calculated only optionally.
! NOTE: Against the common convention, the result (i.e. intent(out)) variables are the last to
! have the optional arguments at the end
!--------------------------------------------------------------------------------------------------
pure subroutine kinetics_slip(Mp,instance,of, &
gdot_slip_pos,gdot_slip_neg,dgdot_dtau_slip_pos,dgdot_dtau_slip_neg)
use prec, only: &
dNeq0
use math, only: &
math_mul33xx33
implicit none
type(tParameters), intent(in) :: &
prm
type(tPhenopowerlawState), intent(in) :: &
stt
integer(pInt), intent(in) :: &
real(pReal), dimension(3,3), intent(in) :: &
Mp !< Mandel stress
integer(pInt), intent(in) :: &
instance, &
of
real(pReal), dimension(prm%totalNslip), intent(out) :: &
real(pReal), dimension(param(instance)%totalNslip), intent(out) :: &
gdot_slip_pos, &
gdot_slip_neg
real(pReal), dimension(prm%totalNslip), optional, intent(out) :: &
real(pReal), dimension(param(instance)%totalNslip), intent(out), optional :: &
dgdot_dtau_slip_pos, &
dgdot_dtau_slip_neg
real(pReal), dimension(3,3), intent(in) :: &
Mp
real(pReal), dimension(prm%totalNslip) :: &
real(pReal), dimension(param(instance)%totalNslip) :: &
tau_slip_pos, &
tau_slip_neg
integer(pInt) :: i
logical :: nonSchmidActive
associate(prm => param(instance), stt => state(instance))
nonSchmidActive = size(prm%nonSchmidCoeff) > 0_pInt
do i = 1_pInt, prm%totalNslip
@ -614,45 +646,50 @@ pure subroutine kinetics_slip(prm,stt,of,Mp,gdot_slip_pos,gdot_slip_neg, &
dgdot_dtau_slip_neg = 0.0_pReal
end where
endif
end associate
end subroutine kinetics_slip
!--------------------------------------------------------------------------------------------------
!> @brief calculates shear rates on twin systems and derivatives with respect to resolved stress
!> @details: Shear rates are calculated only optionally. NOTE: Against the common convention, the
!> result (i.e. intent(out)) variables are the last to have the optional arguments at the end
!> @brief Shear rates on twin systems and their derivatives with respect to resolved stress.
! twinning is assumed to take place only in untwinned volume.
!> @details Derivates are calculated only optionally.
! NOTE: Against the common convention, the result (i.e. intent(out)) variables are the last to
! have the optional arguments at the end.
!--------------------------------------------------------------------------------------------------
pure subroutine kinetics_twin(prm,stt,of,Mp,gdot_twin,dgdot_dtau_twin)
pure subroutine kinetics_twin(Mp,instance,of,&
gdot_twin,dgdot_dtau_twin)
use prec, only: &
dNeq0
use math, only: &
math_mul33xx33
implicit none
type(tParameters), intent(in) :: &
prm
type(tPhenopowerlawState), intent(in) :: &
stt
integer(pInt), intent(in) :: &
real(pReal), dimension(3,3), intent(in) :: &
Mp !< Mandel stress
integer(pInt), intent(in) :: &
instance, &
of
real(pReal), dimension(3,3), intent(in) :: &
Mp
real(pReal), dimension(prm%totalNtwin), intent(out) :: &
real(pReal), dimension(param(instance)%totalNtwin), intent(out) :: &
gdot_twin
real(pReal), dimension(prm%totalNtwin), optional, intent(out) :: &
real(pReal), dimension(param(instance)%totalNtwin), intent(out), optional :: &
dgdot_dtau_twin
real(pReal), dimension(prm%totalNtwin) :: &
real(pReal), dimension(param(instance)%totalNtwin) :: &
tau_twin
integer(pInt) :: i
associate(prm => param(instance), stt => state(instance))
do i = 1_pInt, prm%totalNtwin
tau_twin(i) = math_mul33xx33(Mp,prm%Schmid_twin(1:3,1:3,i))
enddo
where(tau_twin > 0.0_pReal)
gdot_twin = (1.0_pReal-stt%sumF(of))*prm%gdot0_twin*(abs(tau_twin)/stt%xi_twin(:,of))**prm%n_twin
gdot_twin = (1.0_pReal-sum(stt%gamma_twin(:,of)/prm%gamma_twin_char)) & ! only twin in untwinned volume fraction
* prm%gdot0_twin*(abs(tau_twin)/stt%xi_twin(:,of))**prm%n_twin
else where
gdot_twin = 0.0_pReal
end where
@ -665,84 +702,8 @@ pure subroutine kinetics_twin(prm,stt,of,Mp,gdot_twin,dgdot_dtau_twin)
end where
endif
end subroutine kinetics_twin
!--------------------------------------------------------------------------------------------------
!> @brief return array of constitutive results
!--------------------------------------------------------------------------------------------------
function plastic_phenopowerlaw_postResults(Mp,instance,of) result(postResults)
use math, only: &
math_mul33xx33
implicit none
real(pReal), dimension(3,3), intent(in) :: &
Mp !< Mandel stress
integer(pInt), intent(in) :: &
instance, &
of
real(pReal), dimension(sum(plastic_phenopowerlaw_sizePostResult(:,instance))) :: &
postResults
integer(pInt) :: &
o,c,i
real(pReal), dimension(param(instance)%totalNslip) :: &
gdot_slip_pos,gdot_slip_neg
type(tParameters) :: prm
type(tPhenopowerlawState) :: stt
associate( prm => param(instance), stt => state(instance))
postResults = 0.0_pReal
c = 0_pInt
outputsLoop: do o = 1_pInt,size(prm%outputID)
select case(prm%outputID(o))
case (resistance_slip_ID)
postResults(c+1_pInt:c+prm%totalNslip) = stt%xi_slip(1:prm%totalNslip,of)
c = c + prm%totalNslip
case (accumulatedshear_slip_ID)
postResults(c+1_pInt:c+prm%totalNslip) = stt%gamma_slip(1:prm%totalNslip,of)
c = c + prm%totalNslip
case (shearrate_slip_ID)
call kinetics_slip(prm,stt,of,Mp,gdot_slip_pos,gdot_slip_neg)
postResults(c+1_pInt:c+prm%totalNslip) = gdot_slip_pos+gdot_slip_neg
c = c + prm%totalNslip
case (resolvedstress_slip_ID)
do i = 1_pInt, prm%totalNslip
postResults(c+i) = math_mul33xx33(Mp,prm%Schmid_slip(1:3,1:3,i))
enddo
c = c + prm%totalNslip
case (resistance_twin_ID)
postResults(c+1_pInt:c+prm%totalNtwin) = stt%xi_twin(1:prm%totalNtwin,of)
c = c + prm%totalNtwin
case (accumulatedshear_twin_ID)
postResults(c+1_pInt:c+prm%totalNtwin) = stt%gamma_twin(1:prm%totalNtwin,of)
c = c + prm%totalNtwin
case (shearrate_twin_ID)
call kinetics_twin(prm,stt,of,Mp,postResults(c+1_pInt:c+prm%totalNtwin))
c = c + prm%totalNtwin
case (resolvedstress_twin_ID)
do i = 1_pInt, prm%totalNtwin
postResults(c+i) = math_mul33xx33(Mp,prm%Schmid_twin(1:3,1:3,i))
enddo
c = c + prm%totalNtwin
case (totalshear_ID)
postResults(c+1_pInt) = stt%sumGamma(of)
c = c + 1_pInt
case (totalvolfrac_twin_ID)
postResults(c+1_pInt) = stt%sumF(of)
c = c + 1_pInt
end select
enddo outputsLoop
end associate
end function plastic_phenopowerlaw_postResults
end subroutine kinetics_twin
end module plastic_phenopowerlaw

60
src/porosity_none.f90
View File

@ -1,60 +0,0 @@
!--------------------------------------------------------------------------------------------------
!> @author Pratheek Shanthraj, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine for constant porosity
!--------------------------------------------------------------------------------------------------
module porosity_none
implicit none
private
public :: &
porosity_none_init
contains
!--------------------------------------------------------------------------------------------------
!> @brief allocates all neccessary fields, reads information from material configuration file
!--------------------------------------------------------------------------------------------------
subroutine porosity_none_init()
#if defined(__GFORTRAN__) || __INTEL_COMPILER >= 1800
use, intrinsic :: iso_fortran_env, only: &
compiler_version, &
compiler_options
#endif
use prec, only: &
pReal, &
pInt
use IO, only: &
IO_timeStamp
use material
use config
implicit none
integer(pInt) :: &
homog, &
NofMyHomog
write(6,'(/,a)') ' <<<+- porosity_'//POROSITY_none_label//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
initializeInstances: do homog = 1_pInt, material_Nhomogenization
myhomog: if (porosity_type(homog) == POROSITY_none_ID) then
NofMyHomog = count(material_homog == homog)
porosityState(homog)%sizeState = 0_pInt
porosityState(homog)%sizePostResults = 0_pInt
allocate(porosityState(homog)%state0 (0_pInt,NofMyHomog), source=0.0_pReal)
allocate(porosityState(homog)%subState0(0_pInt,NofMyHomog), source=0.0_pReal)
allocate(porosityState(homog)%state (0_pInt,NofMyHomog), source=0.0_pReal)
deallocate(porosity(homog)%p)
allocate (porosity(homog)%p(1), source=porosity_initialPhi(homog))
endif myhomog
enddo initializeInstances
end subroutine porosity_none_init
end module porosity_none

448
src/porosity_phasefield.f90
View File

@ -1,448 +0,0 @@
!--------------------------------------------------------------------------------------------------
!> @author Pratheek Shanthraj, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine for phase field modelling of pore nucleation and growth
!> @details phase field model for pore nucleation and growth based on vacancy clustering
!--------------------------------------------------------------------------------------------------
module porosity_phasefield
use prec, only: &
pReal, &
pInt
implicit none
private
integer(pInt), dimension(:), allocatable, public, protected :: &
porosity_phasefield_sizePostResults !< cumulative size of post results
integer(pInt), dimension(:,:), allocatable, target, public :: &
porosity_phasefield_sizePostResult !< size of each post result output
character(len=64), dimension(:,:), allocatable, target, public :: &
porosity_phasefield_output !< name of each post result output
integer(pInt), dimension(:), allocatable, target, public :: &
porosity_phasefield_Noutput !< number of outputs per instance of this porosity
enum, bind(c)
enumerator :: undefined_ID, &
porosity_ID
end enum
integer(kind(undefined_ID)), dimension(:,:), allocatable, private :: &
porosity_phasefield_outputID !< ID of each post result output
public :: &
porosity_phasefield_init, &
porosity_phasefield_getFormationEnergy, &
porosity_phasefield_getSurfaceEnergy, &
porosity_phasefield_getSourceAndItsTangent, &
porosity_phasefield_getDiffusion33, &
porosity_phasefield_getMobility, &
porosity_phasefield_putPorosity, &
porosity_phasefield_postResults
contains
!--------------------------------------------------------------------------------------------------
!> @brief module initialization
!> @details reads in material parameters, allocates arrays, and does sanity checks
!--------------------------------------------------------------------------------------------------
subroutine porosity_phasefield_init(fileUnit)
#if defined(__GFORTRAN__) || __INTEL_COMPILER >= 1800
use, intrinsic :: iso_fortran_env, only: &
compiler_version, &
compiler_options
#endif
use IO, only: &
IO_read, &
IO_lc, &
IO_getTag, &
IO_isBlank, &
IO_stringPos, &
IO_stringValue, &
IO_floatValue, &
IO_intValue, &
IO_warning, &
IO_error, &
IO_timeStamp, &
IO_EOF
use material, only: &
porosity_type, &
porosity_typeInstance, &
homogenization_Noutput, &
POROSITY_phasefield_label, &
POROSITY_phasefield_ID, &
material_homog, &
mappingHomogenization, &
porosityState, &
porosityMapping, &
porosity, &
porosity_initialPhi
use config, only: &
material_partHomogenization, &
material_partPhase
implicit none
integer(pInt), intent(in) :: fileUnit
integer(pInt), allocatable, dimension(:) :: chunkPos
integer(pInt) :: maxNinstance,mySize=0_pInt,section,instance,o
integer(pInt) :: sizeState
integer(pInt) :: NofMyHomog
character(len=65536) :: &
tag = '', &
line = ''
write(6,'(/,a)') ' <<<+- porosity_'//POROSITY_phasefield_label//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
maxNinstance = int(count(porosity_type == POROSITY_phasefield_ID),pInt)
if (maxNinstance == 0_pInt) return
allocate(porosity_phasefield_sizePostResults(maxNinstance), source=0_pInt)
allocate(porosity_phasefield_sizePostResult (maxval(homogenization_Noutput),maxNinstance),source=0_pInt)
allocate(porosity_phasefield_output (maxval(homogenization_Noutput),maxNinstance))
porosity_phasefield_output = ''
allocate(porosity_phasefield_outputID (maxval(homogenization_Noutput),maxNinstance),source=undefined_ID)
allocate(porosity_phasefield_Noutput (maxNinstance), source=0_pInt)
rewind(fileUnit)
section = 0_pInt
do while (trim(line) /= IO_EOF .and. IO_lc(IO_getTag(line,'<','>')) /= material_partHomogenization)! wind forward to <homogenization>
line = IO_read(fileUnit)
enddo
parsingHomog: do while (trim(line) /= IO_EOF) ! read through sections of homog part
line = IO_read(fileUnit)
if (IO_isBlank(line)) cycle ! skip empty lines
if (IO_getTag(line,'<','>') /= '') then ! stop at next part
line = IO_read(fileUnit, .true.) ! reset IO_read
exit
endif
if (IO_getTag(line,'[',']') /= '') then ! next homog section
section = section + 1_pInt ! advance homog section counter
cycle ! skip to next line
endif
if (section > 0_pInt ) then; if (porosity_type(section) == POROSITY_phasefield_ID) then ! do not short-circuit here (.and. with next if statemen). It's not safe in Fortran
instance = porosity_typeInstance(section) ! which instance of my porosity is present homog
chunkPos = IO_stringPos(line)
tag = IO_lc(IO_stringValue(line,chunkPos,1_pInt)) ! extract key
select case(tag)
case ('(output)')
select case(IO_lc(IO_stringValue(line,chunkPos,2_pInt)))
case ('porosity')
porosity_phasefield_Noutput(instance) = porosity_phasefield_Noutput(instance) + 1_pInt
porosity_phasefield_outputID(porosity_phasefield_Noutput(instance),instance) = porosity_ID
porosity_phasefield_output(porosity_phasefield_Noutput(instance),instance) = &
IO_lc(IO_stringValue(line,chunkPos,2_pInt))
end select
end select
endif; endif
enddo parsingHomog
initializeInstances: do section = 1_pInt, size(porosity_type)
if (porosity_type(section) == POROSITY_phasefield_ID) then
NofMyHomog=count(material_homog==section)
instance = porosity_typeInstance(section)
!--------------------------------------------------------------------------------------------------
! Determine size of postResults array
outputsLoop: do o = 1_pInt,porosity_phasefield_Noutput(instance)
select case(porosity_phasefield_outputID(o,instance))
case(porosity_ID)
mySize = 1_pInt
end select
if (mySize > 0_pInt) then ! any meaningful output found
porosity_phasefield_sizePostResult(o,instance) = mySize
porosity_phasefield_sizePostResults(instance) = porosity_phasefield_sizePostResults(instance) + mySize
endif
enddo outputsLoop
! allocate state arrays
sizeState = 0_pInt
porosityState(section)%sizeState = sizeState
porosityState(section)%sizePostResults = porosity_phasefield_sizePostResults(instance)
allocate(porosityState(section)%state0 (sizeState,NofMyHomog))
allocate(porosityState(section)%subState0(sizeState,NofMyHomog))
allocate(porosityState(section)%state (sizeState,NofMyHomog))
nullify(porosityMapping(section)%p)
porosityMapping(section)%p => mappingHomogenization(1,:,:)
deallocate(porosity(section)%p)
allocate(porosity(section)%p(NofMyHomog), source=porosity_initialPhi(section))
endif
enddo initializeInstances
end subroutine porosity_phasefield_init
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized vacancy formation energy
!--------------------------------------------------------------------------------------------------
function porosity_phasefield_getFormationEnergy(ip,el)
use lattice, only: &
lattice_vacancyFormationEnergy, &
lattice_vacancyVol
use material, only: &
homogenization_Ngrains, &
material_phase
use mesh, only: &
mesh_element
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal) :: &
porosity_phasefield_getFormationEnergy
integer(pInt) :: &
grain
porosity_phasefield_getFormationEnergy = 0.0_pReal
do grain = 1, homogenization_Ngrains(mesh_element(3,el))
porosity_phasefield_getFormationEnergy = porosity_phasefield_getFormationEnergy + &
lattice_vacancyFormationEnergy(material_phase(grain,ip,el))/ &
lattice_vacancyVol(material_phase(grain,ip,el))
enddo
porosity_phasefield_getFormationEnergy = &
porosity_phasefield_getFormationEnergy/real(homogenization_Ngrains(mesh_element(3,el)),pReal)
end function porosity_phasefield_getFormationEnergy
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized pore surface energy (normalized by characteristic length)
!--------------------------------------------------------------------------------------------------
function porosity_phasefield_getSurfaceEnergy(ip,el)
use lattice, only: &
lattice_vacancySurfaceEnergy
use material, only: &
homogenization_Ngrains, &
material_phase
use mesh, only: &
mesh_element
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal) :: &
porosity_phasefield_getSurfaceEnergy
integer(pInt) :: &
grain
porosity_phasefield_getSurfaceEnergy = 0.0_pReal
do grain = 1, homogenization_Ngrains(mesh_element(3,el))
porosity_phasefield_getSurfaceEnergy = porosity_phasefield_getSurfaceEnergy + &
lattice_vacancySurfaceEnergy(material_phase(grain,ip,el))
enddo
porosity_phasefield_getSurfaceEnergy = &
porosity_phasefield_getSurfaceEnergy/real(homogenization_Ngrains(mesh_element(3,el)),pReal)
end function porosity_phasefield_getSurfaceEnergy
!--------------------------------------------------------------------------------------------------
!> @brief calculates homogenized local driving force for pore nucleation and growth
!--------------------------------------------------------------------------------------------------
subroutine porosity_phasefield_getSourceAndItsTangent(phiDot, dPhiDot_dPhi, phi, ip, el)
use math, only : &
math_mul33x33, &
math_mul66x6, &
math_Mandel33to6, &
math_transpose33, &
math_I3
use material, only: &
homogenization_Ngrains, &
material_homog, &
material_phase, &
phase_NstiffnessDegradations, &
phase_stiffnessDegradation, &
vacancyConc, &
vacancyfluxMapping, &
damage, &
damageMapping, &
STIFFNESS_DEGRADATION_damage_ID
use crystallite, only: &
crystallite_Fe
use constitutive, only: &
constitutive_homogenizedC
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), intent(in) :: &
phi
integer(pInt) :: &
phase, &
grain, &
homog, &
mech
real(pReal) :: &
phiDot, dPhiDot_dPhi, Cv, W_e, strain(6), C(6,6)
homog = material_homog(ip,el)
Cv = vacancyConc(homog)%p(vacancyfluxMapping(homog)%p(ip,el))
W_e = 0.0_pReal
do grain = 1, homogenization_Ngrains(homog)
phase = material_phase(grain,ip,el)
strain = math_Mandel33to6(math_mul33x33(math_transpose33(crystallite_Fe(1:3,1:3,grain,ip,el)), &
crystallite_Fe(1:3,1:3,grain,ip,el)) - math_I3)/2.0_pReal
C = constitutive_homogenizedC(grain,ip,el)
do mech = 1_pInt, phase_NstiffnessDegradations(phase)
select case(phase_stiffnessDegradation(mech,phase))
case (STIFFNESS_DEGRADATION_damage_ID)
C = damage(homog)%p(damageMapping(homog)%p(ip,el))* &
damage(homog)%p(damageMapping(homog)%p(ip,el))* &
C
end select
enddo
W_e = W_e + sum(abs(strain*math_mul66x6(C,strain)))
enddo
W_e = W_e/real(homogenization_Ngrains(homog),pReal)
phiDot = 2.0_pReal*(1.0_pReal - phi)*(1.0_pReal - Cv)*(1.0_pReal - Cv) - &
2.0_pReal*phi*(W_e + Cv*porosity_phasefield_getFormationEnergy(ip,el))/ &
porosity_phasefield_getSurfaceEnergy (ip,el)
dPhiDot_dPhi = - 2.0_pReal*(1.0_pReal - Cv)*(1.0_pReal - Cv) &
- 2.0_pReal*(W_e + Cv*porosity_phasefield_getFormationEnergy(ip,el))/ &
porosity_phasefield_getSurfaceEnergy (ip,el)
end subroutine porosity_phasefield_getSourceAndItsTangent
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized nonlocal diffusion tensor in reference configuration
!--------------------------------------------------------------------------------------------------
function porosity_phasefield_getDiffusion33(ip,el)
use lattice, only: &
lattice_PorosityDiffusion33
use material, only: &
homogenization_Ngrains, &
material_phase, &
mappingHomogenization
use crystallite, only: &
crystallite_push33ToRef
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), dimension(3,3) :: &
porosity_phasefield_getDiffusion33
integer(pInt) :: &
homog, &
grain
homog = mappingHomogenization(2,ip,el)
porosity_phasefield_getDiffusion33 = 0.0_pReal
do grain = 1, homogenization_Ngrains(homog)
porosity_phasefield_getDiffusion33 = porosity_phasefield_getDiffusion33 + &
crystallite_push33ToRef(grain,ip,el,lattice_PorosityDiffusion33(1:3,1:3,material_phase(grain,ip,el)))
enddo
porosity_phasefield_getDiffusion33 = &
porosity_phasefield_getDiffusion33/real(homogenization_Ngrains(homog),pReal)
end function porosity_phasefield_getDiffusion33
!--------------------------------------------------------------------------------------------------
!> @brief Returns homogenized phase field mobility
!--------------------------------------------------------------------------------------------------
real(pReal) function porosity_phasefield_getMobility(ip,el)
use mesh, only: &
mesh_element
use lattice, only: &
lattice_PorosityMobility
use material, only: &
material_phase, &
homogenization_Ngrains
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
integer(pInt) :: &
ipc
porosity_phasefield_getMobility = 0.0_pReal
do ipc = 1, homogenization_Ngrains(mesh_element(3,el))
porosity_phasefield_getMobility = porosity_phasefield_getMobility &
+ lattice_PorosityMobility(material_phase(ipc,ip,el))
enddo
porosity_phasefield_getMobility = &
porosity_phasefield_getMobility/real(homogenization_Ngrains(mesh_element(3,el)),pReal)
end function porosity_phasefield_getMobility
!--------------------------------------------------------------------------------------------------
!> @brief updates porosity with solution from phasefield PDE
!--------------------------------------------------------------------------------------------------
subroutine porosity_phasefield_putPorosity(phi,ip,el)
use material, only: &
material_homog, &
porosityMapping, &
porosity
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), intent(in) :: &
phi
integer(pInt) :: &
homog, &
offset
homog = material_homog(ip,el)
offset = porosityMapping(homog)%p(ip,el)
porosity(homog)%p(offset) = phi
end subroutine porosity_phasefield_putPorosity
!--------------------------------------------------------------------------------------------------
!> @brief return array of porosity results
!--------------------------------------------------------------------------------------------------
function porosity_phasefield_postResults(ip,el)
use material, only: &
mappingHomogenization, &
porosity_typeInstance, &
porosity
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point
el !< element
real(pReal), dimension(porosity_phasefield_sizePostResults(porosity_typeInstance(mappingHomogenization(2,ip,el)))) :: &
porosity_phasefield_postResults
integer(pInt) :: &
instance, homog, offset, o, c
homog = mappingHomogenization(2,ip,el)
offset = mappingHomogenization(1,ip,el)
instance = porosity_typeInstance(homog)
c = 0_pInt
porosity_phasefield_postResults = 0.0_pReal
do o = 1_pInt,porosity_phasefield_Noutput(instance)
select case(porosity_phasefield_outputID(o,instance))
case (porosity_ID)
porosity_phasefield_postResults(c+1_pInt) = porosity(homog)%p(offset)
c = c + 1
end select
enddo
end function porosity_phasefield_postResults
end module porosity_phasefield

13
src/source_damage_isoBrittle.f90
View File

@ -246,10 +246,7 @@ subroutine source_damage_isoBrittle_deltaState(C, Fe, ipc, ip, el)
sourceState, &
material_homog, &
phase_NstiffnessDegradations, &
phase_stiffnessDegradation, &
porosity, &
porosityMapping, &
STIFFNESS_DEGRADATION_porosity_ID
phase_stiffnessDegradation
use math, only : &
math_mul33x33, &
math_mul66x6, &
@ -280,14 +277,6 @@ subroutine source_damage_isoBrittle_deltaState(C, Fe, ipc, ip, el)
sourceOffset = source_damage_isoBrittle_offset(phase)
stiffness = C
do mech = 1_pInt, phase_NstiffnessDegradations(phase)
select case(phase_stiffnessDegradation(mech,phase))
case (STIFFNESS_DEGRADATION_porosity_ID)
stiffness = porosity(material_homog(ip,el))%p(porosityMapping(material_homog(ip,el))%p(ip,el))* &
porosity(material_homog(ip,el))%p(porosityMapping(material_homog(ip,el))%p(ip,el))* &
stiffness
end select
enddo
strain = 0.5_pReal*math_Mandel33to6(math_mul33x33(math_transpose33(Fe),Fe)-math_I3)
strainenergy = 2.0_pReal*sum(strain*math_mul66x6(stiffness,strain))/ &

248
src/source_vacancy_irradiation.f90
View File

@ -1,248 +0,0 @@
!--------------------------------------------------------------------------------------------------
!> @author Pratheek Shanthraj, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine for vacancy generation due to irradiation
!> @details to be done
!--------------------------------------------------------------------------------------------------
module source_vacancy_irradiation
use prec, only: &
pReal, &
pInt
implicit none
private
integer(pInt), dimension(:), allocatable, public, protected :: &
source_vacancy_irradiation_sizePostResults, & !< cumulative size of post results
source_vacancy_irradiation_offset, & !< which source is my current damage mechanism?
source_vacancy_irradiation_instance !< instance of damage source mechanism
integer(pInt), dimension(:,:), allocatable, target, public :: &
source_vacancy_irradiation_sizePostResult !< size of each post result output
character(len=64), dimension(:,:), allocatable, target, public :: &
source_vacancy_irradiation_output !< name of each post result output
integer(pInt), dimension(:), allocatable, target, public :: &
source_vacancy_irradiation_Noutput !< number of outputs per instance of this damage
real(pReal), dimension(:), allocatable, private :: &
source_vacancy_irradiation_cascadeProb, &
source_vacancy_irradiation_cascadeVolume
public :: &
source_vacancy_irradiation_init, &
source_vacancy_irradiation_deltaState, &
source_vacancy_irradiation_getRateAndItsTangent
contains
!--------------------------------------------------------------------------------------------------
!> @brief module initialization
!> @details reads in material parameters, allocates arrays, and does sanity checks
!--------------------------------------------------------------------------------------------------
subroutine source_vacancy_irradiation_init(fileUnit)
#if defined(__GFORTRAN__) || __INTEL_COMPILER >= 1800
use, intrinsic :: iso_fortran_env, only: &
compiler_version, &
compiler_options
#endif
use debug, only: &
debug_level,&
debug_constitutive,&
debug_levelBasic
use IO, only: &
IO_read, &
IO_lc, &
IO_getTag, &
IO_isBlank, &
IO_stringPos, &
IO_stringValue, &
IO_floatValue, &
IO_intValue, &
IO_warning, &
IO_error, &
IO_timeStamp, &
IO_EOF
use material, only: &
phase_source, &
phase_Nsources, &
phase_Noutput, &
SOURCE_vacancy_irradiation_label, &
SOURCE_vacancy_irradiation_ID, &
material_phase, &
sourceState
use config, only: &
material_Nphase, &
MATERIAL_partPhase
use numerics,only: &
numerics_integrator
implicit none
integer(pInt), intent(in) :: fileUnit
integer(pInt), allocatable, dimension(:) :: chunkPos
integer(pInt) :: maxNinstance,phase,instance,source,sourceOffset
integer(pInt) :: sizeState, sizeDotState, sizeDeltaState
integer(pInt) :: NofMyPhase
character(len=65536) :: &
tag = '', &
line = ''
write(6,'(/,a)') ' <<<+- source_'//SOURCE_vacancy_irradiation_label//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
maxNinstance = int(count(phase_source == SOURCE_vacancy_irradiation_ID),pInt)
if (maxNinstance == 0_pInt) return
if (iand(debug_level(debug_constitutive),debug_levelBasic) /= 0_pInt) &
write(6,'(a16,1x,i5,/)') '# instances:',maxNinstance
allocate(source_vacancy_irradiation_offset(material_Nphase), source=0_pInt)
allocate(source_vacancy_irradiation_instance(material_Nphase), source=0_pInt)
do phase = 1, material_Nphase
source_vacancy_irradiation_instance(phase) = count(phase_source(:,1:phase) == source_vacancy_irradiation_ID)
do source = 1, phase_Nsources(phase)
if (phase_source(source,phase) == source_vacancy_irradiation_ID) &
source_vacancy_irradiation_offset(phase) = source
enddo
enddo
allocate(source_vacancy_irradiation_sizePostResults(maxNinstance), source=0_pInt)
allocate(source_vacancy_irradiation_sizePostResult(maxval(phase_Noutput),maxNinstance),source=0_pInt)
allocate(source_vacancy_irradiation_output(maxval(phase_Noutput),maxNinstance))
source_vacancy_irradiation_output = ''
allocate(source_vacancy_irradiation_Noutput(maxNinstance), source=0_pInt)
allocate(source_vacancy_irradiation_cascadeProb(maxNinstance), source=0.0_pReal)
allocate(source_vacancy_irradiation_cascadeVolume(maxNinstance), source=0.0_pReal)
rewind(fileUnit)
phase = 0_pInt
do while (trim(line) /= IO_EOF .and. IO_lc(IO_getTag(line,'<','>')) /= MATERIAL_partPhase) ! wind forward to <phase>
line = IO_read(fileUnit)
enddo
parsingFile: do while (trim(line) /= IO_EOF) ! read through sections of phase part
line = IO_read(fileUnit)
if (IO_isBlank(line)) cycle ! skip empty lines
if (IO_getTag(line,'<','>') /= '') then ! stop at next part
line = IO_read(fileUnit, .true.) ! reset IO_read
exit
endif
if (IO_getTag(line,'[',']') /= '') then ! next phase section
phase = phase + 1_pInt ! advance phase section counter
cycle ! skip to next line
endif
if (phase > 0_pInt ) then; if (any(phase_source(:,phase) == SOURCE_vacancy_irradiation_ID)) then ! do not short-circuit here (.and. with next if statemen). It's not safe in Fortran
instance = source_vacancy_irradiation_instance(phase) ! which instance of my vacancy is present phase
chunkPos = IO_stringPos(line)
tag = IO_lc(IO_stringValue(line,chunkPos,1_pInt)) ! extract key
select case(tag)
case ('irradiation_cascadeprobability')
source_vacancy_irradiation_cascadeProb(instance) = IO_floatValue(line,chunkPos,2_pInt)
case ('irradiation_cascadevolume')
source_vacancy_irradiation_cascadeVolume(instance) = IO_floatValue(line,chunkPos,2_pInt)
end select
endif; endif
enddo parsingFile
initializeInstances: do phase = 1_pInt, material_Nphase
if (any(phase_source(:,phase) == SOURCE_vacancy_irradiation_ID)) then
NofMyPhase=count(material_phase==phase)
instance = source_vacancy_irradiation_instance(phase)
sourceOffset = source_vacancy_irradiation_offset(phase)
sizeDotState = 2_pInt
sizeDeltaState = 2_pInt
sizeState = 2_pInt
sourceState(phase)%p(sourceOffset)%sizeState = sizeState
sourceState(phase)%p(sourceOffset)%sizeDotState = sizeDotState
sourceState(phase)%p(sourceOffset)%sizeDeltaState = sizeDeltaState
sourceState(phase)%p(sourceOffset)%sizePostResults = source_vacancy_irradiation_sizePostResults(instance)
allocate(sourceState(phase)%p(sourceOffset)%aTolState (sizeState), source=0.1_pReal)
allocate(sourceState(phase)%p(sourceOffset)%state0 (sizeState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%partionedState0 (sizeState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%subState0 (sizeState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%state (sizeState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%dotState (sizeDotState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%deltaState (sizeDeltaState,NofMyPhase), source=0.0_pReal)
if (any(numerics_integrator == 1_pInt)) then
allocate(sourceState(phase)%p(sourceOffset)%previousDotState (sizeDotState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%previousDotState2 (sizeDotState,NofMyPhase), source=0.0_pReal)
endif
if (any(numerics_integrator == 4_pInt)) &
allocate(sourceState(phase)%p(sourceOffset)%RK4dotState (sizeDotState,NofMyPhase), source=0.0_pReal)
if (any(numerics_integrator == 5_pInt)) &
allocate(sourceState(phase)%p(sourceOffset)%RKCK45dotState (6,sizeDotState,NofMyPhase),source=0.0_pReal)
endif
enddo initializeInstances
end subroutine source_vacancy_irradiation_init
!--------------------------------------------------------------------------------------------------
!> @brief calculates derived quantities from state
!--------------------------------------------------------------------------------------------------
subroutine source_vacancy_irradiation_deltaState(ipc, ip, el)
use material, only: &
phaseAt, phasememberAt, &
sourceState
implicit none
integer(pInt), intent(in) :: &
ipc, & !< component-ID of integration point
ip, & !< integration point
el !< element
integer(pInt) :: &
phase, constituent, sourceOffset
real(pReal) :: &
randNo
phase = phaseAt(ipc,ip,el)
constituent = phasememberAt(ipc,ip,el)
sourceOffset = source_vacancy_irradiation_offset(phase)
call random_number(randNo)
sourceState(phase)%p(sourceOffset)%deltaState(1,constituent) = &
randNo - sourceState(phase)%p(sourceOffset)%state(1,constituent)
call random_number(randNo)
sourceState(phase)%p(sourceOffset)%deltaState(2,constituent) = &
randNo - sourceState(phase)%p(sourceOffset)%state(2,constituent)
end subroutine source_vacancy_irradiation_deltaState
!--------------------------------------------------------------------------------------------------
!> @brief returns local vacancy generation rate
!--------------------------------------------------------------------------------------------------
subroutine source_vacancy_irradiation_getRateAndItsTangent(CvDot, dCvDot_dCv, ipc, ip, el)
use material, only: &
phaseAt, phasememberAt, &
sourceState
implicit none
integer(pInt), intent(in) :: &
ipc, & !< grain number
ip, & !< integration point number
el !< element number
real(pReal), intent(out) :: &
CvDot, dCvDot_dCv
integer(pInt) :: &
instance, phase, constituent, sourceOffset
phase = phaseAt(ipc,ip,el)
constituent = phasememberAt(ipc,ip,el)
instance = source_vacancy_irradiation_instance(phase)
sourceOffset = source_vacancy_irradiation_offset(phase)
CvDot = 0.0_pReal
dCvDot_dCv = 0.0_pReal
if (sourceState(phase)%p(sourceOffset)%state0(1,constituent) < source_vacancy_irradiation_cascadeProb(instance)) &
CvDot = sourceState(phase)%p(sourceOffset)%state0(2,constituent)*source_vacancy_irradiation_cascadeVolume(instance)
end subroutine source_vacancy_irradiation_getRateAndItsTangent
end module source_vacancy_irradiation

210
src/source_vacancy_phenoplasticity.f90
View File

@ -1,210 +0,0 @@
!--------------------------------------------------------------------------------------------------
!> @author Pratheek Shanthraj, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine for vacancy generation due to plasticity
!> @details to be done
!--------------------------------------------------------------------------------------------------
module source_vacancy_phenoplasticity
use prec, only: &
pReal, &
pInt
implicit none
private
integer(pInt), dimension(:), allocatable, public, protected :: &
source_vacancy_phenoplasticity_sizePostResults, & !< cumulative size of post results
source_vacancy_phenoplasticity_offset, & !< which source is my current damage mechanism?
source_vacancy_phenoplasticity_instance !< instance of damage source mechanism
integer(pInt), dimension(:,:), allocatable, target, public :: &
source_vacancy_phenoplasticity_sizePostResult !< size of each post result output
character(len=64), dimension(:,:), allocatable, target, public :: &
source_vacancy_phenoplasticity_output !< name of each post result output
integer(pInt), dimension(:), allocatable, target, public :: &
source_vacancy_phenoplasticity_Noutput !< number of outputs per instance of this damage
real(pReal), dimension(:), allocatable, private :: &
source_vacancy_phenoplasticity_rateCoeff
public :: &
source_vacancy_phenoplasticity_init, &
source_vacancy_phenoplasticity_getRateAndItsTangent
contains
!--------------------------------------------------------------------------------------------------
!> @brief module initialization
!> @details reads in material parameters, allocates arrays, and does sanity checks
!--------------------------------------------------------------------------------------------------
subroutine source_vacancy_phenoplasticity_init(fileUnit)
#if defined(__GFORTRAN__) || __INTEL_COMPILER >= 1800
use, intrinsic :: iso_fortran_env, only: &
compiler_version, &
compiler_options
#endif
use debug, only: &
debug_level,&
debug_constitutive,&
debug_levelBasic
use IO, only: &
IO_read, &
IO_lc, &
IO_getTag, &
IO_isBlank, &
IO_stringPos, &
IO_stringValue, &
IO_floatValue, &
IO_intValue, &
IO_warning, &
IO_error, &
IO_timeStamp, &
IO_EOF
use material, only: &
phase_source, &
phase_Nsources, &
phase_Noutput, &
SOURCE_vacancy_phenoplasticity_label, &
SOURCE_vacancy_phenoplasticity_ID, &
material_phase, &
sourceState
use config, only: &
material_Nphase, &
MATERIAL_partPhase
use numerics,only: &
numerics_integrator
implicit none
integer(pInt), intent(in) :: fileUnit
integer(pInt), allocatable, dimension(:) :: chunkPos
integer(pInt) :: maxNinstance,phase,instance,source,sourceOffset
integer(pInt) :: sizeState, sizeDotState, sizeDeltaState
integer(pInt) :: NofMyPhase
character(len=65536) :: &
tag = '', &
line = ''
write(6,'(/,a)') ' <<<+- source_'//SOURCE_vacancy_phenoplasticity_label//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
maxNinstance = int(count(phase_source == SOURCE_vacancy_phenoplasticity_ID),pInt)
if (maxNinstance == 0_pInt) return
if (iand(debug_level(debug_constitutive),debug_levelBasic) /= 0_pInt) &
write(6,'(a16,1x,i5,/)') '# instances:',maxNinstance
allocate(source_vacancy_phenoplasticity_offset(material_Nphase), source=0_pInt)
allocate(source_vacancy_phenoplasticity_instance(material_Nphase), source=0_pInt)
do phase = 1, material_Nphase
source_vacancy_phenoplasticity_instance(phase) = count(phase_source(:,1:phase) == source_vacancy_phenoplasticity_ID)
do source = 1, phase_Nsources(phase)
if (phase_source(source,phase) == source_vacancy_phenoplasticity_ID) &
source_vacancy_phenoplasticity_offset(phase) = source
enddo
enddo
allocate(source_vacancy_phenoplasticity_sizePostResults(maxNinstance), source=0_pInt)
allocate(source_vacancy_phenoplasticity_sizePostResult(maxval(phase_Noutput),maxNinstance),source=0_pInt)
allocate(source_vacancy_phenoplasticity_output(maxval(phase_Noutput),maxNinstance))
source_vacancy_phenoplasticity_output = ''
allocate(source_vacancy_phenoplasticity_Noutput(maxNinstance), source=0_pInt)
allocate(source_vacancy_phenoplasticity_rateCoeff(maxNinstance), source=0.0_pReal)
rewind(fileUnit)
phase = 0_pInt
do while (trim(line) /= IO_EOF .and. IO_lc(IO_getTag(line,'<','>')) /= MATERIAL_partPhase) ! wind forward to <phase>
line = IO_read(fileUnit)
enddo
parsingFile: do while (trim(line) /= IO_EOF) ! read through sections of phase part
line = IO_read(fileUnit)
if (IO_isBlank(line)) cycle ! skip empty lines
if (IO_getTag(line,'<','>') /= '') then ! stop at next part
line = IO_read(fileUnit, .true.) ! reset IO_read
exit
endif
if (IO_getTag(line,'[',']') /= '') then ! next phase section
phase = phase + 1_pInt ! advance phase section counter
cycle ! skip to next line
endif
if (phase > 0_pInt ) then; if (any(phase_source(:,phase) == SOURCE_vacancy_phenoplasticity_ID)) then ! do not short-circuit here (.and. with next if statemen). It's not safe in Fortran
instance = source_vacancy_phenoplasticity_instance(phase) ! which instance of my vacancy is present phase
chunkPos = IO_stringPos(line)
tag = IO_lc(IO_stringValue(line,chunkPos,1_pInt)) ! extract key
select case(tag)
case ('phenoplasticity_ratecoeff')
source_vacancy_phenoplasticity_rateCoeff(instance) = IO_floatValue(line,chunkPos,2_pInt)
end select
endif; endif
enddo parsingFile
initializeInstances: do phase = 1_pInt, material_Nphase
if (any(phase_source(:,phase) == SOURCE_vacancy_phenoplasticity_ID)) then
NofMyPhase=count(material_phase==phase)
instance = source_vacancy_phenoplasticity_instance(phase)
sourceOffset = source_vacancy_phenoplasticity_offset(phase)
sizeDotState = 0_pInt
sizeDeltaState = 0_pInt
sizeState = 0_pInt
sourceState(phase)%p(sourceOffset)%sizeState = sizeState
sourceState(phase)%p(sourceOffset)%sizeDotState = sizeDotState
sourceState(phase)%p(sourceOffset)%sizeDeltaState = sizeDeltaState
sourceState(phase)%p(sourceOffset)%sizePostResults = source_vacancy_phenoplasticity_sizePostResults(instance)
allocate(sourceState(phase)%p(sourceOffset)%aTolState (sizeState), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%state0 (sizeState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%partionedState0 (sizeState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%subState0 (sizeState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%state (sizeState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%dotState (sizeDotState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%deltaState (sizeDeltaState,NofMyPhase), source=0.0_pReal)
if (any(numerics_integrator == 1_pInt)) then
allocate(sourceState(phase)%p(sourceOffset)%previousDotState (sizeDotState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%previousDotState2 (sizeDotState,NofMyPhase), source=0.0_pReal)
endif
if (any(numerics_integrator == 4_pInt)) &
allocate(sourceState(phase)%p(sourceOffset)%RK4dotState (sizeDotState,NofMyPhase), source=0.0_pReal)
if (any(numerics_integrator == 5_pInt)) &
allocate(sourceState(phase)%p(sourceOffset)%RKCK45dotState (6,sizeDotState,NofMyPhase),source=0.0_pReal)
endif
enddo initializeInstances
end subroutine source_vacancy_phenoplasticity_init
!--------------------------------------------------------------------------------------------------
!> @brief returns local vacancy generation rate
!--------------------------------------------------------------------------------------------------
subroutine source_vacancy_phenoplasticity_getRateAndItsTangent(CvDot, dCvDot_dCv, ipc, ip, el)
use material, only: &
phaseAt, phasememberAt, &
plasticState
implicit none
integer(pInt), intent(in) :: &
ipc, & !< grain number
ip, & !< integration point number
el !< element number
real(pReal), intent(out) :: &
CvDot, dCvDot_dCv
integer(pInt) :: &
instance, phase, constituent
phase = phaseAt(ipc,ip,el)
constituent = phasememberAt(ipc,ip,el)
instance = source_vacancy_phenoplasticity_instance(phase)
CvDot = &
source_vacancy_phenoplasticity_rateCoeff(instance)* &
sum(plasticState(phase)%slipRate(:,constituent))
dCvDot_dCv = 0.0_pReal
end subroutine source_vacancy_phenoplasticity_getRateAndItsTangent
end module source_vacancy_phenoplasticity

250
src/source_vacancy_thermalfluc.f90
View File

@ -1,250 +0,0 @@
!--------------------------------------------------------------------------------------------------
!> @author Pratheek Shanthraj, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine for vacancy generation due to thermal fluctuations
!> @details to be done
!--------------------------------------------------------------------------------------------------
module source_vacancy_thermalfluc
use prec, only: &
pReal, &
pInt
implicit none
private
integer(pInt), dimension(:), allocatable, public, protected :: &
source_vacancy_thermalfluc_sizePostResults, & !< cumulative size of post results
source_vacancy_thermalfluc_offset, & !< which source is my current damage mechanism?
source_vacancy_thermalfluc_instance !< instance of damage source mechanism
integer(pInt), dimension(:,:), allocatable, target, public :: &
source_vacancy_thermalfluc_sizePostResult !< size of each post result output
character(len=64), dimension(:,:), allocatable, target, public :: &
source_vacancy_thermalfluc_output !< name of each post result output
integer(pInt), dimension(:), allocatable, target, public :: &
source_vacancy_thermalfluc_Noutput !< number of outputs per instance of this damage
real(pReal), dimension(:), allocatable, private :: &
source_vacancy_thermalfluc_amplitude, &
source_vacancy_thermalfluc_normVacancyEnergy
public :: &
source_vacancy_thermalfluc_init, &
source_vacancy_thermalfluc_deltaState, &
source_vacancy_thermalfluc_getRateAndItsTangent
contains
!--------------------------------------------------------------------------------------------------
!> @brief module initialization
!> @details reads in material parameters, allocates arrays, and does sanity checks
!--------------------------------------------------------------------------------------------------
subroutine source_vacancy_thermalfluc_init(fileUnit)
#if defined(__GFORTRAN__) || __INTEL_COMPILER >= 1800
use, intrinsic :: iso_fortran_env, only: &
compiler_version, &
compiler_options
#endif
use debug, only: &
debug_level,&
debug_constitutive,&
debug_levelBasic
use IO, only: &
IO_read, &
IO_lc, &
IO_getTag, &
IO_isBlank, &
IO_stringPos, &
IO_stringValue, &
IO_floatValue, &
IO_intValue, &
IO_warning, &
IO_error, &
IO_timeStamp, &
IO_EOF
use lattice, only: &
lattice_vacancyFormationEnergy
use material, only: &
phase_source, &
phase_Nsources, &
phase_Noutput, &
SOURCE_vacancy_thermalfluc_label, &
SOURCE_vacancy_thermalfluc_ID, &
material_phase, &
sourceState
use config, only: &
material_Nphase, &
MATERIAL_partPhase
use numerics,only: &
numerics_integrator
implicit none
integer(pInt), intent(in) :: fileUnit
integer(pInt), allocatable, dimension(:) :: chunkPos
integer(pInt) :: maxNinstance,phase,instance,source,sourceOffset
integer(pInt) :: sizeState, sizeDotState, sizeDeltaState
integer(pInt) :: NofMyPhase
character(len=65536) :: &
tag = '', &
line = ''
write(6,'(/,a)') ' <<<+- source_'//SOURCE_vacancy_thermalfluc_label//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
maxNinstance = int(count(phase_source == SOURCE_vacancy_thermalfluc_ID),pInt)
if (maxNinstance == 0_pInt) return
if (iand(debug_level(debug_constitutive),debug_levelBasic) /= 0_pInt) &
write(6,'(a16,1x,i5,/)') '# instances:',maxNinstance
allocate(source_vacancy_thermalfluc_offset(material_Nphase), source=0_pInt)
allocate(source_vacancy_thermalfluc_instance(material_Nphase), source=0_pInt)
do phase = 1, material_Nphase
source_vacancy_thermalfluc_instance(phase) = count(phase_source(:,1:phase) == source_vacancy_thermalfluc_ID)
do source = 1, phase_Nsources(phase)
if (phase_source(source,phase) == source_vacancy_thermalfluc_ID) &
source_vacancy_thermalfluc_offset(phase) = source
enddo
enddo
allocate(source_vacancy_thermalfluc_sizePostResults(maxNinstance), source=0_pInt)
allocate(source_vacancy_thermalfluc_sizePostResult(maxval(phase_Noutput),maxNinstance),source=0_pInt)
allocate(source_vacancy_thermalfluc_output(maxval(phase_Noutput),maxNinstance))
source_vacancy_thermalfluc_output = ''
allocate(source_vacancy_thermalfluc_Noutput(maxNinstance), source=0_pInt)
allocate(source_vacancy_thermalfluc_amplitude(maxNinstance), source=0.0_pReal)
allocate(source_vacancy_thermalfluc_normVacancyEnergy(maxNinstance), source=0.0_pReal)
rewind(fileUnit)
phase = 0_pInt
do while (trim(line) /= IO_EOF .and. IO_lc(IO_getTag(line,'<','>')) /= MATERIAL_partPhase) ! wind forward to <phase>
line = IO_read(fileUnit)
enddo
parsingFile: do while (trim(line) /= IO_EOF) ! read through sections of phase part
line = IO_read(fileUnit)
if (IO_isBlank(line)) cycle ! skip empty lines
if (IO_getTag(line,'<','>') /= '') then ! stop at next part
line = IO_read(fileUnit, .true.) ! reset IO_read
exit
endif
if (IO_getTag(line,'[',']') /= '') then ! next phase section
phase = phase + 1_pInt ! advance phase section counter
cycle ! skip to next line
endif
if (phase > 0_pInt ) then; if (any(phase_source(:,phase) == SOURCE_vacancy_thermalfluc_ID)) then ! do not short-circuit here (.and. with next if statemen). It's not safe in Fortran
instance = source_vacancy_thermalfluc_instance(phase) ! which instance of my vacancy is present phase
chunkPos = IO_stringPos(line)
tag = IO_lc(IO_stringValue(line,chunkPos,1_pInt)) ! extract key
select case(tag)
case ('thermalfluctuation_amplitude')
source_vacancy_thermalfluc_amplitude(instance) = IO_floatValue(line,chunkPos,2_pInt)
end select
endif; endif
enddo parsingFile
initializeInstances: do phase = 1_pInt, material_Nphase
if (any(phase_source(:,phase) == SOURCE_vacancy_thermalfluc_ID)) then
NofMyPhase=count(material_phase==phase)
instance = source_vacancy_thermalfluc_instance(phase)
source_vacancy_thermalfluc_normVacancyEnergy(instance) = &
lattice_vacancyFormationEnergy(phase)/1.3806488e-23_pReal
sourceOffset = source_vacancy_thermalfluc_offset(phase)
sizeDotState = 1_pInt
sizeDeltaState = 1_pInt
sizeState = 1_pInt
sourceState(phase)%p(sourceOffset)%sizeState = sizeState
sourceState(phase)%p(sourceOffset)%sizeDotState = sizeDotState
sourceState(phase)%p(sourceOffset)%sizeDeltaState = sizeDeltaState
sourceState(phase)%p(sourceOffset)%sizePostResults = source_vacancy_thermalfluc_sizePostResults(instance)
allocate(sourceState(phase)%p(sourceOffset)%aTolState (sizeState), source=0.1_pReal)
allocate(sourceState(phase)%p(sourceOffset)%state0 (sizeState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%partionedState0 (sizeState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%subState0 (sizeState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%state (sizeState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%dotState (sizeDotState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%deltaState (sizeDeltaState,NofMyPhase), source=0.0_pReal)
if (any(numerics_integrator == 1_pInt)) then
allocate(sourceState(phase)%p(sourceOffset)%previousDotState (sizeDotState,NofMyPhase), source=0.0_pReal)
allocate(sourceState(phase)%p(sourceOffset)%previousDotState2 (sizeDotState,NofMyPhase), source=0.0_pReal)
endif
if (any(numerics_integrator == 4_pInt)) &
allocate(sourceState(phase)%p(sourceOffset)%RK4dotState (sizeDotState,NofMyPhase), source=0.0_pReal)
if (any(numerics_integrator == 5_pInt)) &
allocate(sourceState(phase)%p(sourceOffset)%RKCK45dotState (6,sizeDotState,NofMyPhase),source=0.0_pReal)
endif
enddo initializeInstances
end subroutine source_vacancy_thermalfluc_init
!--------------------------------------------------------------------------------------------------
!> @brief calculates derived quantities from state
!--------------------------------------------------------------------------------------------------
subroutine source_vacancy_thermalfluc_deltaState(ipc, ip, el)
use material, only: &
phaseAt, phasememberAt, &
sourceState
implicit none
integer(pInt), intent(in) :: &
ipc, & !< component-ID of integration point
ip, & !< integration point
el !< element
integer(pInt) :: &
phase, constituent, sourceOffset
real(pReal) :: &
randNo
phase = phaseAt(ipc,ip,el)
constituent = phasememberAt(ipc,ip,el)
sourceOffset = source_vacancy_thermalfluc_offset(phase)
call random_number(randNo)
sourceState(phase)%p(sourceOffset)%deltaState(1,constituent) = &
randNo - 0.5_pReal - sourceState(phase)%p(sourceOffset)%state(1,constituent)
end subroutine source_vacancy_thermalfluc_deltaState
!--------------------------------------------------------------------------------------------------
!> @brief returns local vacancy generation rate
!--------------------------------------------------------------------------------------------------
subroutine source_vacancy_thermalfluc_getRateAndItsTangent(CvDot, dCvDot_dCv, ipc, ip, el)
use material, only: &
phaseAt, phasememberAt, &
material_homog, &
temperature, &
thermalMapping, &
sourceState
implicit none
integer(pInt), intent(in) :: &
ipc, & !< grain number
ip, & !< integration point number
el !< element number
real(pReal), intent(out) :: &
CvDot, dCvDot_dCv
integer(pInt) :: &
instance, phase, constituent, sourceOffset
phase = phaseAt(ipc,ip,el)
constituent = phasememberAt(ipc,ip,el)
instance = source_vacancy_thermalfluc_instance(phase)
sourceOffset = source_vacancy_thermalfluc_offset(phase)
CvDot = source_vacancy_thermalfluc_amplitude(instance)* &
sourceState(phase)%p(sourceOffset)%state0(2,constituent)* &
exp(-source_vacancy_thermalfluc_normVacancyEnergy(instance)/ &
temperature(material_homog(ip,el))%p(thermalMapping(material_homog(ip,el))%p(ip,el)))
dCvDot_dCv = 0.0_pReal
end subroutine source_vacancy_thermalfluc_getRateAndItsTangent
end module source_vacancy_thermalfluc

602
src/vacancyflux_cahnhilliard.f90
View File

@ -1,602 +0,0 @@
!--------------------------------------------------------------------------------------------------
!> @author Pratheek Shanthraj, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine for conservative transport of vacancy concentration field
!> @details to be done
!--------------------------------------------------------------------------------------------------
module vacancyflux_cahnhilliard
use prec, only: &
pReal, &
pInt, &
group_float
implicit none
private
integer(pInt), dimension(:), allocatable, public, protected :: &
vacancyflux_cahnhilliard_sizePostResults !< cumulative size of post results
integer(pInt), dimension(:,:), allocatable, target, public :: &
vacancyflux_cahnhilliard_sizePostResult !< size of each post result output
character(len=64), dimension(:,:), allocatable, target, public :: &
vacancyflux_cahnhilliard_output !< name of each post result output
integer(pInt), dimension(:), allocatable, target, public :: &
vacancyflux_cahnhilliard_Noutput !< number of outputs per instance of this damage
real(pReal), dimension(:), allocatable, private :: &
vacancyflux_cahnhilliard_flucAmplitude
type(group_float), dimension(:), allocatable, private :: &
vacancyflux_cahnhilliard_thermalFluc
real(pReal), parameter, private :: &
kB = 1.3806488e-23_pReal !< Boltzmann constant in J/Kelvin
enum, bind(c)
enumerator :: undefined_ID, &
vacancyConc_ID
end enum
integer(kind(undefined_ID)), dimension(:,:), allocatable, private :: &
vacancyflux_cahnhilliard_outputID !< ID of each post result output
public :: &
vacancyflux_cahnhilliard_init, &
vacancyflux_cahnhilliard_getSourceAndItsTangent, &
vacancyflux_cahnhilliard_getMobility33, &
vacancyflux_cahnhilliard_getDiffusion33, &
vacancyflux_cahnhilliard_getChemPotAndItsTangent, &
vacancyflux_cahnhilliard_putVacancyConcAndItsRate, &
vacancyflux_cahnhilliard_postResults
private :: &
vacancyflux_cahnhilliard_getFormationEnergy, &
vacancyflux_cahnhilliard_getEntropicCoeff, &
vacancyflux_cahnhilliard_KinematicChemPotAndItsTangent
contains
!--------------------------------------------------------------------------------------------------
!> @brief module initialization
!> @details reads in material parameters, allocates arrays, and does sanity checks
!--------------------------------------------------------------------------------------------------
subroutine vacancyflux_cahnhilliard_init(fileUnit)
#if defined(__GFORTRAN__) || __INTEL_COMPILER >= 1800
use, intrinsic :: iso_fortran_env, only: &
compiler_version, &
compiler_options
#endif
use IO, only: &
IO_read, &
IO_lc, &
IO_getTag, &
IO_isBlank, &
IO_stringPos, &
IO_stringValue, &
IO_floatValue, &
IO_intValue, &
IO_warning, &
IO_error, &
IO_timeStamp, &
IO_EOF
use material, only: &
vacancyflux_type, &
vacancyflux_typeInstance, &
homogenization_Noutput, &
VACANCYFLUX_cahnhilliard_label, &
VACANCYFLUX_cahnhilliard_ID, &
material_homog, &
mappingHomogenization, &
vacancyfluxState, &
vacancyfluxMapping, &
vacancyConc, &
vacancyConcRate, &
vacancyflux_initialCv
use config, only: &
material_partPhase, &
material_partHomogenization
implicit none
integer(pInt), intent(in) :: fileUnit
integer(pInt), allocatable, dimension(:) :: chunkPos
integer(pInt) :: maxNinstance,mySize=0_pInt,section,instance,o,offset
integer(pInt) :: sizeState
integer(pInt) :: NofMyHomog
character(len=65536) :: &
tag = '', &
line = ''
write(6,'(/,a)') ' <<<+- vacancyflux_'//VACANCYFLUX_cahnhilliard_label//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
maxNinstance = int(count(vacancyflux_type == VACANCYFLUX_cahnhilliard_ID),pInt)
if (maxNinstance == 0_pInt) return
allocate(vacancyflux_cahnhilliard_sizePostResults(maxNinstance), source=0_pInt)
allocate(vacancyflux_cahnhilliard_sizePostResult (maxval(homogenization_Noutput),maxNinstance),source=0_pInt)
allocate(vacancyflux_cahnhilliard_output (maxval(homogenization_Noutput),maxNinstance))
vacancyflux_cahnhilliard_output = ''
allocate(vacancyflux_cahnhilliard_outputID (maxval(homogenization_Noutput),maxNinstance),source=undefined_ID)
allocate(vacancyflux_cahnhilliard_Noutput (maxNinstance), source=0_pInt)
allocate(vacancyflux_cahnhilliard_flucAmplitude (maxNinstance))
allocate(vacancyflux_cahnhilliard_thermalFluc (maxNinstance))
rewind(fileUnit)
section = 0_pInt
do while (trim(line) /= IO_EOF .and. IO_lc(IO_getTag(line,'<','>')) /= material_partHomogenization)! wind forward to <homogenization>
line = IO_read(fileUnit)
enddo
parsingHomog: do while (trim(line) /= IO_EOF) ! read through sections of homog part
line = IO_read(fileUnit)
if (IO_isBlank(line)) cycle ! skip empty lines
if (IO_getTag(line,'<','>') /= '') then ! stop at next part
line = IO_read(fileUnit, .true.) ! reset IO_read
exit
endif
if (IO_getTag(line,'[',']') /= '') then ! next homog section
section = section + 1_pInt ! advance homog section counter
cycle ! skip to next line
endif
if (section > 0_pInt ) then; if (vacancyflux_type(section) == VACANCYFLUX_cahnhilliard_ID) then ! do not short-circuit here (.and. with next if statemen). It's not safe in Fortran
instance = vacancyflux_typeInstance(section) ! which instance of my vacancyflux is present homog
chunkPos = IO_stringPos(line)
tag = IO_lc(IO_stringValue(line,chunkPos,1_pInt)) ! extract key
select case(tag)
case ('(output)')
select case(IO_lc(IO_stringValue(line,chunkPos,2_pInt)))
case ('vacancyconc')
vacancyflux_cahnhilliard_Noutput(instance) = vacancyflux_cahnhilliard_Noutput(instance) + 1_pInt
vacancyflux_cahnhilliard_outputID(vacancyflux_cahnhilliard_Noutput(instance),instance) = vacancyConc_ID
vacancyflux_cahnhilliard_output(vacancyflux_cahnhilliard_Noutput(instance),instance) = &
IO_lc(IO_stringValue(line,chunkPos,2_pInt))
end select
case ('vacancyflux_flucamplitude')
vacancyflux_cahnhilliard_flucAmplitude(instance) = IO_floatValue(line,chunkPos,2_pInt)
end select
endif; endif
enddo parsingHomog
initializeInstances: do section = 1_pInt, size(vacancyflux_type)
if (vacancyflux_type(section) == VACANCYFLUX_cahnhilliard_ID) then
NofMyHomog=count(material_homog==section)
instance = vacancyflux_typeInstance(section)
!--------------------------------------------------------------------------------------------------
! Determine size of postResults array
outputsLoop: do o = 1_pInt,vacancyflux_cahnhilliard_Noutput(instance)
select case(vacancyflux_cahnhilliard_outputID(o,instance))
case(vacancyConc_ID)
mySize = 1_pInt
end select
if (mySize > 0_pInt) then ! any meaningful output found
vacancyflux_cahnhilliard_sizePostResult(o,instance) = mySize
vacancyflux_cahnhilliard_sizePostResults(instance) = vacancyflux_cahnhilliard_sizePostResults(instance) + mySize
endif
enddo outputsLoop
! allocate state arrays
sizeState = 0_pInt
vacancyfluxState(section)%sizeState = sizeState
vacancyfluxState(section)%sizePostResults = vacancyflux_cahnhilliard_sizePostResults(instance)
allocate(vacancyfluxState(section)%state0 (sizeState,NofMyHomog))
allocate(vacancyfluxState(section)%subState0(sizeState,NofMyHomog))
allocate(vacancyfluxState(section)%state (sizeState,NofMyHomog))
allocate(vacancyflux_cahnhilliard_thermalFluc(instance)%p(NofMyHomog))
do offset = 1_pInt, NofMyHomog
call random_number(vacancyflux_cahnhilliard_thermalFluc(instance)%p(offset))
vacancyflux_cahnhilliard_thermalFluc(instance)%p(offset) = &
1.0_pReal - &
vacancyflux_cahnhilliard_flucAmplitude(instance)* &
(vacancyflux_cahnhilliard_thermalFluc(instance)%p(offset) - 0.5_pReal)
enddo
nullify(vacancyfluxMapping(section)%p)
vacancyfluxMapping(section)%p => mappingHomogenization(1,:,:)
deallocate(vacancyConc (section)%p)
allocate (vacancyConc (section)%p(NofMyHomog), source=vacancyflux_initialCv(section))
deallocate(vacancyConcRate(section)%p)
allocate (vacancyConcRate(section)%p(NofMyHomog), source=0.0_pReal)
endif
enddo initializeInstances
end subroutine vacancyflux_cahnhilliard_init
!--------------------------------------------------------------------------------------------------
!> @brief calculates homogenized vacancy driving forces
!--------------------------------------------------------------------------------------------------
subroutine vacancyflux_cahnhilliard_getSourceAndItsTangent(CvDot, dCvDot_dCv, Cv, ip, el)
use material, only: &
homogenization_Ngrains, &
mappingHomogenization, &
phaseAt, &
phase_source, &
phase_Nsources, &
SOURCE_vacancy_phenoplasticity_ID, &
SOURCE_vacancy_irradiation_ID, &
SOURCE_vacancy_thermalfluc_ID
use source_vacancy_phenoplasticity, only: &
source_vacancy_phenoplasticity_getRateAndItsTangent
use source_vacancy_irradiation, only: &
source_vacancy_irradiation_getRateAndItsTangent
use source_vacancy_thermalfluc, only: &
source_vacancy_thermalfluc_getRateAndItsTangent
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), intent(in) :: &
Cv
integer(pInt) :: &
phase, &
grain, &
source
real(pReal) :: &
CvDot, dCvDot_dCv, localCvDot, dLocalCvDot_dCv
CvDot = 0.0_pReal
dCvDot_dCv = 0.0_pReal
do grain = 1, homogenization_Ngrains(mappingHomogenization(2,ip,el))
phase = phaseAt(grain,ip,el)
do source = 1_pInt, phase_Nsources(phase)
select case(phase_source(source,phase))
case (SOURCE_vacancy_phenoplasticity_ID)
call source_vacancy_phenoplasticity_getRateAndItsTangent (localCvDot, dLocalCvDot_dCv, grain, ip, el)
case (SOURCE_vacancy_irradiation_ID)
call source_vacancy_irradiation_getRateAndItsTangent (localCvDot, dLocalCvDot_dCv, grain, ip, el)
case (SOURCE_vacancy_thermalfluc_ID)
call source_vacancy_thermalfluc_getRateAndItsTangent(localCvDot, dLocalCvDot_dCv, grain, ip, el)
end select
CvDot = CvDot + localCvDot
dCvDot_dCv = dCvDot_dCv + dLocalCvDot_dCv
enddo
enddo
CvDot = CvDot/real(homogenization_Ngrains(mappingHomogenization(2,ip,el)),pReal)
dCvDot_dCv = dCvDot_dCv/real(homogenization_Ngrains(mappingHomogenization(2,ip,el)),pReal)
end subroutine vacancyflux_cahnhilliard_getSourceAndItsTangent
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized vacancy mobility tensor in reference configuration
!--------------------------------------------------------------------------------------------------
function vacancyflux_cahnhilliard_getMobility33(ip,el)
use lattice, only: &
lattice_vacancyfluxMobility33
use material, only: &
homogenization_Ngrains, &
material_phase
use mesh, only: &
mesh_element
use crystallite, only: &
crystallite_push33ToRef
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), dimension(3,3) :: &
vacancyflux_cahnhilliard_getMobility33
integer(pInt) :: &
grain
vacancyflux_cahnhilliard_getMobility33 = 0.0_pReal
do grain = 1, homogenization_Ngrains(mesh_element(3,el))
vacancyflux_cahnhilliard_getMobility33 = vacancyflux_cahnhilliard_getMobility33 + &
crystallite_push33ToRef(grain,ip,el,lattice_vacancyfluxMobility33(:,:,material_phase(grain,ip,el)))
enddo
vacancyflux_cahnhilliard_getMobility33 = &
vacancyflux_cahnhilliard_getMobility33/real(homogenization_Ngrains(mesh_element(3,el)),pReal)
end function vacancyflux_cahnhilliard_getMobility33
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized vacancy diffusion tensor in reference configuration
!--------------------------------------------------------------------------------------------------
function vacancyflux_cahnhilliard_getDiffusion33(ip,el)
use lattice, only: &
lattice_vacancyfluxDiffusion33
use material, only: &
homogenization_Ngrains, &
material_phase
use mesh, only: &
mesh_element
use crystallite, only: &
crystallite_push33ToRef
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), dimension(3,3) :: &
vacancyflux_cahnhilliard_getDiffusion33
integer(pInt) :: &
grain
vacancyflux_cahnhilliard_getDiffusion33 = 0.0_pReal
do grain = 1, homogenization_Ngrains(mesh_element(3,el))
vacancyflux_cahnhilliard_getDiffusion33 = vacancyflux_cahnhilliard_getDiffusion33 + &
crystallite_push33ToRef(grain,ip,el,lattice_vacancyfluxDiffusion33(:,:,material_phase(grain,ip,el)))
enddo
vacancyflux_cahnhilliard_getDiffusion33 = &
vacancyflux_cahnhilliard_getDiffusion33/real(homogenization_Ngrains(mesh_element(3,el)),pReal)
end function vacancyflux_cahnhilliard_getDiffusion33
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized vacancy formation energy
!--------------------------------------------------------------------------------------------------
real(pReal) function vacancyflux_cahnhilliard_getFormationEnergy(ip,el)
use lattice, only: &
lattice_vacancyFormationEnergy, &
lattice_vacancyVol, &
lattice_vacancySurfaceEnergy
use material, only: &
homogenization_Ngrains, &
material_phase
use mesh, only: &
mesh_element
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
integer(pInt) :: &
grain
vacancyflux_cahnhilliard_getFormationEnergy = 0.0_pReal
do grain = 1, homogenization_Ngrains(mesh_element(3,el))
vacancyflux_cahnhilliard_getFormationEnergy = vacancyflux_cahnhilliard_getFormationEnergy + &
lattice_vacancyFormationEnergy(material_phase(grain,ip,el))/ &
lattice_vacancyVol(material_phase(grain,ip,el))/ &
lattice_vacancySurfaceEnergy(material_phase(grain,ip,el))
enddo
vacancyflux_cahnhilliard_getFormationEnergy = &
vacancyflux_cahnhilliard_getFormationEnergy/real(homogenization_Ngrains(mesh_element(3,el)),pReal)
end function vacancyflux_cahnhilliard_getFormationEnergy
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized vacancy entropy coefficient
!--------------------------------------------------------------------------------------------------
real(pReal) function vacancyflux_cahnhilliard_getEntropicCoeff(ip,el)
use lattice, only: &
lattice_vacancyVol, &
lattice_vacancySurfaceEnergy
use material, only: &
homogenization_Ngrains, &
material_homog, &
material_phase, &
temperature, &
thermalMapping
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
integer(pInt) :: &
grain
vacancyflux_cahnhilliard_getEntropicCoeff = 0.0_pReal
do grain = 1, homogenization_Ngrains(material_homog(ip,el))
vacancyflux_cahnhilliard_getEntropicCoeff = vacancyflux_cahnhilliard_getEntropicCoeff + &
kB/ &
lattice_vacancyVol(material_phase(grain,ip,el))/ &
lattice_vacancySurfaceEnergy(material_phase(grain,ip,el))
enddo
vacancyflux_cahnhilliard_getEntropicCoeff = &
vacancyflux_cahnhilliard_getEntropicCoeff* &
temperature(material_homog(ip,el))%p(thermalMapping(material_homog(ip,el))%p(ip,el))/ &
real(homogenization_Ngrains(material_homog(ip,el)),pReal)
end function vacancyflux_cahnhilliard_getEntropicCoeff
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized kinematic contribution to chemical potential
!--------------------------------------------------------------------------------------------------
subroutine vacancyflux_cahnhilliard_KinematicChemPotAndItsTangent(KPot, dKPot_dCv, Cv, ip, el)
use lattice, only: &
lattice_vacancySurfaceEnergy
use material, only: &
homogenization_Ngrains, &
material_homog, &
phase_kinematics, &
phase_Nkinematics, &
material_phase, &
KINEMATICS_vacancy_strain_ID
use crystallite, only: &
crystallite_Tstar_v, &
crystallite_Fi0, &
crystallite_Fi
use kinematics_vacancy_strain, only: &
kinematics_vacancy_strain_ChemPotAndItsTangent
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), intent(in) :: &
Cv
real(pReal), intent(out) :: &
KPot, dKPot_dCv
real(pReal) :: &
my_KPot, my_dKPot_dCv
integer(pInt) :: &
grain, kinematics
KPot = 0.0_pReal
dKPot_dCv = 0.0_pReal
do grain = 1_pInt,homogenization_Ngrains(material_homog(ip,el))
do kinematics = 1_pInt, phase_Nkinematics(material_phase(grain,ip,el))
select case (phase_kinematics(kinematics,material_phase(grain,ip,el)))
case (KINEMATICS_vacancy_strain_ID)
call kinematics_vacancy_strain_ChemPotAndItsTangent(my_KPot, my_dKPot_dCv, &
crystallite_Tstar_v(1:6,grain,ip,el), &
crystallite_Fi0(1:3,1:3,grain,ip,el), &
crystallite_Fi (1:3,1:3,grain,ip,el), &
grain,ip, el)
case default
my_KPot = 0.0_pReal
my_dKPot_dCv = 0.0_pReal
end select
KPot = KPot + my_KPot/lattice_vacancySurfaceEnergy(material_phase(grain,ip,el))
dKPot_dCv = dKPot_dCv + my_dKPot_dCv/lattice_vacancySurfaceEnergy(material_phase(grain,ip,el))
enddo
enddo
KPot = KPot/real(homogenization_Ngrains(material_homog(ip,el)),pReal)
dKPot_dCv = dKPot_dCv/real(homogenization_Ngrains(material_homog(ip,el)),pReal)
end subroutine vacancyflux_cahnhilliard_KinematicChemPotAndItsTangent
!--------------------------------------------------------------------------------------------------
!> @brief returns homogenized chemical potential and its tangent
!--------------------------------------------------------------------------------------------------
subroutine vacancyflux_cahnhilliard_getChemPotAndItsTangent(ChemPot,dChemPot_dCv,Cv,ip,el)
use numerics, only: &
vacancyBoundPenalty, &
vacancyPolyOrder
use material, only: &
mappingHomogenization, &
vacancyflux_typeInstance, &
porosity, &
porosityMapping
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), intent(in) :: &
Cv
real(pReal), intent(out) :: &
ChemPot, &
dChemPot_dCv
real(pReal) :: &
VoidPhaseFrac, kBT, KPot, dKPot_dCv
integer(pInt) :: &
homog, o
homog = mappingHomogenization(2,ip,el)
VoidPhaseFrac = porosity(homog)%p(porosityMapping(homog)%p(ip,el))
kBT = vacancyflux_cahnhilliard_getEntropicCoeff(ip,el)
ChemPot = vacancyflux_cahnhilliard_getFormationEnergy(ip,el)
dChemPot_dCv = 0.0_pReal
do o = 1_pInt, vacancyPolyOrder
ChemPot = ChemPot + kBT*((2.0_pReal*Cv - 1.0_pReal)**real(2_pInt*o-1_pInt,pReal))/ &
real(2_pInt*o-1_pInt,pReal)
dChemPot_dCv = dChemPot_dCv + 2.0_pReal*kBT*(2.0_pReal*Cv - 1.0_pReal)**real(2_pInt*o-2_pInt,pReal)
enddo
ChemPot = VoidPhaseFrac*VoidPhaseFrac*ChemPot &
- 2.0_pReal*(1.0_pReal - Cv)*(1.0_pReal - VoidPhaseFrac)*(1.0_pReal - VoidPhaseFrac)
dChemPot_dCv = VoidPhaseFrac*VoidPhaseFrac*dChemPot_dCv &
+ 2.0_pReal*(1.0_pReal - VoidPhaseFrac)*(1.0_pReal - VoidPhaseFrac)
call vacancyflux_cahnhilliard_KinematicChemPotAndItsTangent(KPot, dKPot_dCv, Cv, ip, el)
ChemPot = ChemPot + KPot
dChemPot_dCv = dChemPot_dCv + dKPot_dCv
if (Cv < 0.0_pReal) then
ChemPot = ChemPot - 3.0_pReal*vacancyBoundPenalty*Cv*Cv
dChemPot_dCv = dChemPot_dCv - 6.0_pReal*vacancyBoundPenalty*Cv
elseif (Cv > 1.0_pReal) then
ChemPot = ChemPot + 3.0_pReal*vacancyBoundPenalty*(1.0_pReal - Cv)*(1.0_pReal - Cv)
dChemPot_dCv = dChemPot_dCv - 6.0_pReal*vacancyBoundPenalty*(1.0_pReal - Cv)
endif
ChemPot = ChemPot* &
vacancyflux_cahnhilliard_thermalFluc(vacancyflux_typeInstance(homog))%p(mappingHomogenization(1,ip,el))
dChemPot_dCv = dChemPot_dCv* &
vacancyflux_cahnhilliard_thermalFluc(vacancyflux_typeInstance(homog))%p(mappingHomogenization(1,ip,el))
end subroutine vacancyflux_cahnhilliard_getChemPotAndItsTangent
!--------------------------------------------------------------------------------------------------
!> @brief updated vacancy concentration and its rate with solution from transport PDE
!--------------------------------------------------------------------------------------------------
subroutine vacancyflux_cahnhilliard_putVacancyConcAndItsRate(Cv,Cvdot,ip,el)
use material, only: &
mappingHomogenization, &
vacancyConc, &
vacancyConcRate, &
vacancyfluxMapping
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), intent(in) :: &
Cv, &
Cvdot
integer(pInt) :: &
homog, &
offset
homog = mappingHomogenization(2,ip,el)
offset = vacancyfluxMapping(homog)%p(ip,el)
vacancyConc (homog)%p(offset) = Cv
vacancyConcRate(homog)%p(offset) = Cvdot
end subroutine vacancyflux_cahnhilliard_putVacancyConcAndItsRate
!--------------------------------------------------------------------------------------------------
!> @brief return array of vacancy transport results
!--------------------------------------------------------------------------------------------------
function vacancyflux_cahnhilliard_postResults(ip,el)
use material, only: &
mappingHomogenization, &
vacancyflux_typeInstance, &
vacancyConc, &
vacancyfluxMapping
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point
el !< element
real(pReal), dimension(vacancyflux_cahnhilliard_sizePostResults(vacancyflux_typeInstance(mappingHomogenization(2,ip,el)))) :: &
vacancyflux_cahnhilliard_postResults
integer(pInt) :: &
instance, homog, offset, o, c
homog = mappingHomogenization(2,ip,el)
offset = vacancyfluxMapping(homog)%p(ip,el)
instance = vacancyflux_typeInstance(homog)
c = 0_pInt
vacancyflux_cahnhilliard_postResults = 0.0_pReal
do o = 1_pInt,vacancyflux_cahnhilliard_Noutput(instance)
select case(vacancyflux_cahnhilliard_outputID(o,instance))
case (vacancyConc_ID)
vacancyflux_cahnhilliard_postResults(c+1_pInt) = vacancyConc(homog)%p(offset)
c = c + 1
end select
enddo
end function vacancyflux_cahnhilliard_postResults
end module vacancyflux_cahnhilliard

328
src/vacancyflux_isochempot.f90
View File

@ -1,328 +0,0 @@
!--------------------------------------------------------------------------------------------------
!> @author Pratheek Shanthraj, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine for locally evolving vacancy concentration
!> @details to be done
!--------------------------------------------------------------------------------------------------
module vacancyflux_isochempot
use prec, only: &
pReal, &
pInt
implicit none
private
integer(pInt), dimension(:), allocatable, public, protected :: &
vacancyflux_isochempot_sizePostResults !< cumulative size of post results
integer(pInt), dimension(:,:), allocatable, target, public :: &
vacancyflux_isochempot_sizePostResult !< size of each post result output
character(len=64), dimension(:,:), allocatable, target, public :: &
vacancyflux_isochempot_output !< name of each post result output
integer(pInt), dimension(:), allocatable, target, public :: &
vacancyflux_isochempot_Noutput !< number of outputs per instance of this damage
enum, bind(c)
enumerator :: undefined_ID, &
vacancyconc_ID
end enum
integer(kind(undefined_ID)), dimension(:,:), allocatable, private :: &
vacancyflux_isochempot_outputID !< ID of each post result output
public :: &
vacancyflux_isochempot_init, &
vacancyflux_isochempot_updateState, &
vacancyflux_isochempot_getSourceAndItsTangent, &
vacancyflux_isochempot_postResults
contains
!--------------------------------------------------------------------------------------------------
!> @brief module initialization
!> @details reads in material parameters, allocates arrays, and does sanity checks
!--------------------------------------------------------------------------------------------------
subroutine vacancyflux_isochempot_init(fileUnit)
#if defined(__GFORTRAN__) || __INTEL_COMPILER >= 1800
use, intrinsic :: iso_fortran_env, only: &
compiler_version, &
compiler_options
#endif
use IO, only: &
IO_read, &
IO_lc, &
IO_getTag, &
IO_isBlank, &
IO_stringPos, &
IO_stringValue, &
IO_floatValue, &
IO_intValue, &
IO_warning, &
IO_error, &
IO_timeStamp, &
IO_EOF
use material, only: &
vacancyflux_type, &
vacancyflux_typeInstance, &
homogenization_Noutput, &
VACANCYFLUX_isochempot_label, &
VACANCYFLUX_isochempot_ID, &
material_homog, &
mappingHomogenization, &
vacancyfluxState, &
vacancyfluxMapping, &
vacancyConc, &
vacancyConcRate, &
vacancyflux_initialCv
use config, only: &
material_partHomogenization
implicit none
integer(pInt), intent(in) :: fileUnit
integer(pInt), allocatable, dimension(:) :: chunkPos
integer(pInt) :: maxNinstance,mySize=0_pInt,section,instance,o
integer(pInt) :: sizeState
integer(pInt) :: NofMyHomog
character(len=65536) :: &
tag = '', &
line = ''
write(6,'(/,a)') ' <<<+- vacancyflux_'//VACANCYFLUX_isochempot_label//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
maxNinstance = int(count(vacancyflux_type == VACANCYFLUX_isochempot_ID),pInt)
if (maxNinstance == 0_pInt) return
allocate(vacancyflux_isochempot_sizePostResults(maxNinstance), source=0_pInt)
allocate(vacancyflux_isochempot_sizePostResult (maxval(homogenization_Noutput),maxNinstance),source=0_pInt)
allocate(vacancyflux_isochempot_output (maxval(homogenization_Noutput),maxNinstance))
vacancyflux_isochempot_output = ''
allocate(vacancyflux_isochempot_outputID (maxval(homogenization_Noutput),maxNinstance),source=undefined_ID)
allocate(vacancyflux_isochempot_Noutput (maxNinstance), source=0_pInt)
rewind(fileUnit)
section = 0_pInt
do while (trim(line) /= IO_EOF .and. IO_lc(IO_getTag(line,'<','>')) /= material_partHomogenization)! wind forward to <homogenization>
line = IO_read(fileUnit)
enddo
parsingFile: do while (trim(line) /= IO_EOF) ! read through sections of homog part
line = IO_read(fileUnit)
if (IO_isBlank(line)) cycle ! skip empty lines
if (IO_getTag(line,'<','>') /= '') then ! stop at next part
line = IO_read(fileUnit, .true.) ! reset IO_read
exit
endif
if (IO_getTag(line,'[',']') /= '') then ! next homog section
section = section + 1_pInt ! advance homog section counter
cycle ! skip to next line
endif
if (section > 0_pInt ) then; if (vacancyflux_type(section) == VACANCYFLUX_isochempot_ID) then ! do not short-circuit here (.and. with next if statemen). It's not safe in Fortran
instance = vacancyflux_typeInstance(section) ! which instance of my vacancyflux is present homog
chunkPos = IO_stringPos(line)
tag = IO_lc(IO_stringValue(line,chunkPos,1_pInt)) ! extract key
select case(tag)
case ('(output)')
select case(IO_lc(IO_stringValue(line,chunkPos,2_pInt)))
case ('vacancyconc')
vacancyflux_isochempot_Noutput(instance) = vacancyflux_isochempot_Noutput(instance) + 1_pInt
vacancyflux_isochempot_outputID(vacancyflux_isochempot_Noutput(instance),instance) = vacancyconc_ID
vacancyflux_isochempot_output(vacancyflux_isochempot_Noutput(instance),instance) = &
IO_lc(IO_stringValue(line,chunkPos,2_pInt))
end select
end select
endif; endif
enddo parsingFile
initializeInstances: do section = 1_pInt, size(vacancyflux_type)
if (vacancyflux_type(section) == VACANCYFLUX_isochempot_ID) then
NofMyHomog=count(material_homog==section)
instance = vacancyflux_typeInstance(section)
!--------------------------------------------------------------------------------------------------
! Determine size of postResults array
outputsLoop: do o = 1_pInt,vacancyflux_isochempot_Noutput(instance)
select case(vacancyflux_isochempot_outputID(o,instance))
case(vacancyconc_ID)
mySize = 1_pInt
end select
if (mySize > 0_pInt) then ! any meaningful output found
vacancyflux_isochempot_sizePostResult(o,instance) = mySize
vacancyflux_isochempot_sizePostResults(instance) = vacancyflux_isochempot_sizePostResults(instance) + mySize
endif
enddo outputsLoop
! allocate state arrays
sizeState = 1_pInt
vacancyfluxState(section)%sizeState = sizeState
vacancyfluxState(section)%sizePostResults = vacancyflux_isochempot_sizePostResults(instance)
allocate(vacancyfluxState(section)%state0 (sizeState,NofMyHomog), source=vacancyflux_initialCv(section))
allocate(vacancyfluxState(section)%subState0(sizeState,NofMyHomog), source=vacancyflux_initialCv(section))
allocate(vacancyfluxState(section)%state (sizeState,NofMyHomog), source=vacancyflux_initialCv(section))
nullify(vacancyfluxMapping(section)%p)
vacancyfluxMapping(section)%p => mappingHomogenization(1,:,:)
deallocate(vacancyConc(section)%p)
vacancyConc(section)%p => vacancyfluxState(section)%state(1,:)
deallocate(vacancyConcRate(section)%p)
allocate(vacancyConcRate(section)%p(NofMyHomog), source=0.0_pReal)
endif
enddo initializeInstances
end subroutine vacancyflux_isochempot_init
!--------------------------------------------------------------------------------------------------
!> @brief calculates change in vacancy concentration based on local vacancy generation model
!--------------------------------------------------------------------------------------------------
function vacancyflux_isochempot_updateState(subdt, ip, el)
use numerics, only: &
err_vacancyflux_tolAbs, &
err_vacancyflux_tolRel
use material, only: &
mappingHomogenization, &
vacancyflux_typeInstance, &
vacancyfluxState, &
vacancyConc, &
vacancyConcRate, &
vacancyfluxMapping
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), intent(in) :: &
subdt
logical, dimension(2) :: &
vacancyflux_isochempot_updateState
integer(pInt) :: &
homog, &
offset, &
instance
real(pReal) :: &
Cv, Cvdot, dCvDot_dCv
homog = mappingHomogenization(2,ip,el)
offset = mappingHomogenization(1,ip,el)
instance = vacancyflux_typeInstance(homog)
Cv = vacancyfluxState(homog)%subState0(1,offset)
call vacancyflux_isochempot_getSourceAndItsTangent(CvDot, dCvDot_dCv, Cv, ip, el)
Cv = Cv + subdt*Cvdot
vacancyflux_isochempot_updateState = [ abs(Cv - vacancyfluxState(homog)%state(1,offset)) &
<= err_vacancyflux_tolAbs &
.or. abs(Cv - vacancyfluxState(homog)%state(1,offset)) &
<= err_vacancyflux_tolRel*abs(vacancyfluxState(homog)%state(1,offset)), &
.true.]
vacancyConc (homog)%p(vacancyfluxMapping(homog)%p(ip,el)) = Cv
vacancyConcRate(homog)%p(vacancyfluxMapping(homog)%p(ip,el)) = &
(vacancyfluxState(homog)%state(1,offset) - vacancyfluxState(homog)%subState0(1,offset))/(subdt+tiny(0.0_pReal))
end function vacancyflux_isochempot_updateState
!--------------------------------------------------------------------------------------------------
!> @brief calculates homogenized vacancy driving forces
!--------------------------------------------------------------------------------------------------
subroutine vacancyflux_isochempot_getSourceAndItsTangent(CvDot, dCvDot_dCv, Cv, ip, el)
use material, only: &
homogenization_Ngrains, &
mappingHomogenization, &
phaseAt, &
phase_source, &
phase_Nsources, &
SOURCE_vacancy_phenoplasticity_ID, &
SOURCE_vacancy_irradiation_ID, &
SOURCE_vacancy_thermalfluc_ID
use source_vacancy_phenoplasticity, only: &
source_vacancy_phenoplasticity_getRateAndItsTangent
use source_vacancy_irradiation, only: &
source_vacancy_irradiation_getRateAndItsTangent
use source_vacancy_thermalfluc, only: &
source_vacancy_thermalfluc_getRateAndItsTangent
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point number
el !< element number
real(pReal), intent(in) :: &
Cv
integer(pInt) :: &
phase, &
grain, &
source
real(pReal) :: &
CvDot, dCvDot_dCv, localCvDot, dLocalCvDot_dCv
CvDot = 0.0_pReal
dCvDot_dCv = 0.0_pReal
do grain = 1, homogenization_Ngrains(mappingHomogenization(2,ip,el))
phase = phaseAt(grain,ip,el)
do source = 1_pInt, phase_Nsources(phase)
select case(phase_source(source,phase))
case (SOURCE_vacancy_phenoplasticity_ID)
call source_vacancy_phenoplasticity_getRateAndItsTangent (localCvDot, dLocalCvDot_dCv, grain, ip, el)
case (SOURCE_vacancy_irradiation_ID)
call source_vacancy_irradiation_getRateAndItsTangent (localCvDot, dLocalCvDot_dCv, grain, ip, el)
case (SOURCE_vacancy_thermalfluc_ID)
call source_vacancy_thermalfluc_getRateAndItsTangent(localCvDot, dLocalCvDot_dCv, grain, ip, el)
end select
CvDot = CvDot + localCvDot
dCvDot_dCv = dCvDot_dCv + dLocalCvDot_dCv
enddo
enddo
CvDot = CvDot/real(homogenization_Ngrains(mappingHomogenization(2,ip,el)),pReal)
dCvDot_dCv = dCvDot_dCv/real(homogenization_Ngrains(mappingHomogenization(2,ip,el)),pReal)
end subroutine vacancyflux_isochempot_getSourceAndItsTangent
!--------------------------------------------------------------------------------------------------
!> @brief return array of vacancy transport results
!--------------------------------------------------------------------------------------------------
function vacancyflux_isochempot_postResults(ip,el)
use material, only: &
mappingHomogenization, &
vacancyflux_typeInstance, &
vacancyConc, &
vacancyfluxMapping
implicit none
integer(pInt), intent(in) :: &
ip, & !< integration point
el !< element
real(pReal), dimension(vacancyflux_isochempot_sizePostResults(vacancyflux_typeInstance(mappingHomogenization(2,ip,el)))) :: &
vacancyflux_isochempot_postResults
integer(pInt) :: &
instance, homog, offset, o, c
homog = mappingHomogenization(2,ip,el)
offset = vacancyfluxMapping(homog)%p(ip,el)
instance = vacancyflux_typeInstance(homog)
c = 0_pInt
vacancyflux_isochempot_postResults = 0.0_pReal
do o = 1_pInt,vacancyflux_isochempot_Noutput(instance)
select case(vacancyflux_isochempot_outputID(o,instance))
case (vacancyconc_ID)
vacancyflux_isochempot_postResults(c+1_pInt) = vacancyConc(homog)%p(offset)
c = c + 1
end select
enddo
end function vacancyflux_isochempot_postResults
end module vacancyflux_isochempot

62
src/vacancyflux_isoconc.f90
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@ -1,62 +0,0 @@
!--------------------------------------------------------------------------------------------------
!> @author Pratheek Shanthraj, Max-Planck-Institut für Eisenforschung GmbH
!> @brief material subroutine for constant vacancy concentration
!--------------------------------------------------------------------------------------------------
module vacancyflux_isoconc
implicit none
private
public :: &
vacancyflux_isoconc_init
contains
!--------------------------------------------------------------------------------------------------
!> @brief allocates all neccessary fields, reads information from material configuration file
!--------------------------------------------------------------------------------------------------
subroutine vacancyflux_isoconc_init()
#if defined(__GFORTRAN__) || __INTEL_COMPILER >= 1800
use, intrinsic :: iso_fortran_env, only: &
compiler_version, &
compiler_options
#endif
use prec, only: &
pReal, &
pInt
use IO, only: &
IO_timeStamp
use material
use config
implicit none
integer(pInt) :: &
homog, &
NofMyHomog
write(6,'(/,a)') ' <<<+- vacancyflux_'//VACANCYFLUX_isoconc_label//' init -+>>>'
write(6,'(a15,a)') ' Current time: ',IO_timeStamp()
#include "compilation_info.f90"
initializeInstances: do homog = 1_pInt, material_Nhomogenization
myhomog: if (vacancyflux_type(homog) == VACANCYFLUX_isoconc_ID) then
NofMyHomog = count(material_homog == homog)
vacancyfluxState(homog)%sizeState = 0_pInt
vacancyfluxState(homog)%sizePostResults = 0_pInt
allocate(vacancyfluxState(homog)%state0 (0_pInt,NofMyHomog))
allocate(vacancyfluxState(homog)%subState0(0_pInt,NofMyHomog))
allocate(vacancyfluxState(homog)%state (0_pInt,NofMyHomog))
deallocate(vacancyConc (homog)%p)
allocate (vacancyConc (homog)%p(1), source=vacancyflux_initialCv(homog))
deallocate(vacancyConcRate(homog)%p)
allocate (vacancyConcRate(homog)%p(1), source=0.0_pReal)
endif myhomog
enddo initializeInstances
end subroutine vacancyflux_isoconc_init
end module vacancyflux_isoconc