simplified grid/size synonyms treatment
This commit is contained in:
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21c4447955
commit
dd3d53e238
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@ -27,6 +27,10 @@ class extendedOption(Option):
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#--------------------------------------------------------------------------------------------------
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#--------------------------------------------------------------------------------------------------
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# MAIN
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# MAIN
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#--------------------------------------------------------------------------------------------------
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#--------------------------------------------------------------------------------------------------
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synonyms = {
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'grid': ['resolution'],
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'size': ['dimension'],
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}
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identifiers = {
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identifiers = {
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'grid': ['a','b','c'],
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'grid': ['a','b','c'],
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'size': ['x','y','z'],
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'size': ['x','y','z'],
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@ -100,8 +104,8 @@ for file in files:
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for header in theTable.info:
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for header in theTable.info:
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headitems = map(str.lower,header.split())
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headitems = map(str.lower,header.split())
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if len(headitems) == 0: continue # skip blank lines
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if len(headitems) == 0: continue # skip blank lines
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if headitems[0] == 'resolution': headitems[0] = 'grid'
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for synonym,alternatives in synonyms.iteritems():
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if headitems[0] == 'dimension': headitems[0] = 'size'
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if headitems[0] in alternatives: headitems[0] = synonym
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if headitems[0] in mappings.keys():
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if headitems[0] in mappings.keys():
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if headitems[0] in identifiers.keys():
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if headitems[0] in identifiers.keys():
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for i in xrange(len(identifiers[headitems[0]])):
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for i in xrange(len(identifiers[headitems[0]])):
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@ -27,6 +27,10 @@ class extendedOption(Option):
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#--------------------------------------------------------------------------------------------------
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#--------------------------------------------------------------------------------------------------
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# MAIN
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# MAIN
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#--------------------------------------------------------------------------------------------------
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#--------------------------------------------------------------------------------------------------
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synonyms = {
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'grid': ['resolution'],
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'size': ['dimension'],
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}
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identifiers = {
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identifiers = {
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'grid': ['a','b','c'],
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'grid': ['a','b','c'],
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'size': ['x','y','z'],
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'size': ['x','y','z'],
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@ -77,15 +81,15 @@ for file in files:
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'grid': numpy.zeros(3,'i'),
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'grid': numpy.zeros(3,'i'),
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'size': numpy.zeros(3,'d'),
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'size': numpy.zeros(3,'d'),
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'origin': numpy.zeros(3,'d'),
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'origin': numpy.zeros(3,'d'),
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'homogenization': 0,
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'microstructures': 0,
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'microstructures': 0,
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'homogenization': 0
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}
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}
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for header in theTable.info:
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for header in theTable.info:
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headitems = map(str.lower,header.split())
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headitems = map(str.lower,header.split())
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if len(headitems) == 0: continue
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if len(headitems) == 0: continue
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if headitems[0] == 'resolution': headitems[0] = 'grid'
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for synonym,alternatives in synonyms.iteritems():
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if headitems[0] == 'dimension': headitems[0] = 'size'
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if headitems[0] in alternatives: headitems[0] = synonym
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if headitems[0] in mappings.keys():
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if headitems[0] in mappings.keys():
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if headitems[0] in identifiers.keys():
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if headitems[0] in identifiers.keys():
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for i in xrange(len(identifiers[headitems[0]])):
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for i in xrange(len(identifiers[headitems[0]])):
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@ -140,7 +140,7 @@ for file in files:
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for i in xrange(3):
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for i in xrange(3):
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if info['size'][i] <= 0.0: # any invalid size?
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if info['size'][i] <= 0.0: # any invalid size?
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info['size'][i] = float(info['grid'][i])/max(info['grid'])
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info['size'][i] = float(info['grid'][i])/max(info['grid'])
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file['croak'].write('rescaling size %i...\n'%i)
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file['croak'].write('rescaling size %s...\n'%{0:'x',1:'y',2:'z'}[i])
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file['croak'].write('grains to map: %i\n'%info['grains'] + \
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file['croak'].write('grains to map: %i\n'%info['grains'] + \
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'grid a b c: %s\n'%(' x '.join(map(str,info['grid']))) + \
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'grid a b c: %s\n'%(' x '.join(map(str,info['grid']))) + \
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@ -159,7 +159,6 @@ for file in files:
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continue
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continue
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#--- prepare data ---------------------------------------------------------------------------------
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#--- prepare data ---------------------------------------------------------------------------------
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formatwidth = 1+int(math.log10(info['grains']))
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coords = (theData[:,:3]*info['size']).transpose()
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coords = (theData[:,:3]*info['size']).transpose()
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eulers = (theData[:,3:6]).transpose()
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eulers = (theData[:,3:6]).transpose()
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@ -200,13 +199,14 @@ for file in files:
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"grid\ta %i\tb %i\tc %i"%(info['grid'][0],info['grid'][1],info['grid'][2],),
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"grid\ta %i\tb %i\tc %i"%(info['grid'][0],info['grid'][1],info['grid'][2],),
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"size\tx %f\ty %f\tz %f"%(info['size'][0],info['size'][1],info['size'][2],),
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"size\tx %f\ty %f\tz %f"%(info['size'][0],info['size'][1],info['size'][2],),
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"origin\tx %f\ty %f\tz %f"%(info['origin'][0],info['origin'][1],info['origin'][2],),
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"origin\tx %f\ty %f\tz %f"%(info['origin'][0],info['origin'][1],info['origin'][2],),
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"microstructures\t%i"%(info['grains']-missing),
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"homogenization\t%i"%info['homogenization'],
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"homogenization\t%i"%info['homogenization'],
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"microstructures\t%i"%(info['grains']-missing),
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])
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])
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theTable.head_write()
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theTable.head_write()
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theTable.output_flush()
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theTable.output_flush()
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# --- write microstructure information ------------------------------------------------------------
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# --- write microstructure information ------------------------------------------------------------
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formatwidth = 1+int(math.log10(info['grains']))
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theTable.data = indices.reshape(info['grid'][1]*info['grid'][2],info['grid'][0])
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theTable.data = indices.reshape(info['grid'][1]*info['grid'][2],info['grid'][0])
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theTable.data_writeArray('%%%ii'%(formatwidth))
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theTable.data_writeArray('%%%ii'%(formatwidth))
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@ -27,6 +27,10 @@ class extendedOption(Option):
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#--------------------------------------------------------------------------------------------------
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#--------------------------------------------------------------------------------------------------
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# MAIN
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# MAIN
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#--------------------------------------------------------------------------------------------------
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#--------------------------------------------------------------------------------------------------
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synonyms = {
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'grid': ['resolution'],
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'size': ['dimension'],
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}
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identifiers = {
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identifiers = {
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'grid': ['a','b','c'],
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'grid': ['a','b','c'],
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'size': ['x','y','z'],
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'size': ['x','y','z'],
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@ -85,8 +89,8 @@ for file in files:
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for header in theTable.info:
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for header in theTable.info:
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headitems = map(str.lower,header.split())
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headitems = map(str.lower,header.split())
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if len(headitems) == 0: continue
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if len(headitems) == 0: continue
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if headitems[0] == 'resolution': headitems[0] = 'grid'
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for synonym,alternatives in synonyms.iteritems():
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if headitems[0] == 'dimension': headitems[0] = 'size'
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if headitems[0] in alternatives: headitems[0] = synonym
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if headitems[0] in mappings.keys():
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if headitems[0] in mappings.keys():
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if headitems[0] in identifiers.keys():
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if headitems[0] in identifiers.keys():
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for i in xrange(len(identifiers[headitems[0]])):
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for i in xrange(len(identifiers[headitems[0]])):
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@ -26,6 +26,10 @@ class extendedOption(Option):
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#--------------------------------------------------------------------------------------------------
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#--------------------------------------------------------------------------------------------------
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# MAIN
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# MAIN
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#--------------------------------------------------------------------------------------------------
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#--------------------------------------------------------------------------------------------------
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synonyms = {
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'grid': ['resolution'],
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'size': ['dimension'],
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}
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identifiers = {
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identifiers = {
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'grid': ['a','b','c'],
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'grid': ['a','b','c'],
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'size': ['x','y','z'],
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'size': ['x','y','z'],
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@ -103,8 +107,8 @@ for file in files:
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for header in theTable.info:
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for header in theTable.info:
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headitems = map(str.lower,header.split())
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headitems = map(str.lower,header.split())
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if len(headitems) == 0: continue
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if len(headitems) == 0: continue
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if headitems[0] == 'resolution': headitems[0] = 'grid'
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for synonym,alternatives in synonyms.iteritems():
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if headitems[0] == 'dimension': headitems[0] = 'size'
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if headitems[0] in alternatives: headitems[0] = synonym
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if headitems[0] in mappings.keys():
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if headitems[0] in mappings.keys():
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if headitems[0] in identifiers.keys():
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if headitems[0] in identifiers.keys():
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for i in xrange(len(identifiers[headitems[0]])):
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for i in xrange(len(identifiers[headitems[0]])):
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@ -27,6 +27,10 @@ class extendedOption(Option):
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#--------------------------------------------------------------------------------------------------
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#--------------------------------------------------------------------------------------------------
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# MAIN
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# MAIN
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#--------------------------------------------------------------------------------------------------
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#--------------------------------------------------------------------------------------------------
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synonyms = {
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'grid': ['resolution'],
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'size': ['dimension'],
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}
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identifiers = {
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identifiers = {
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'grid': ['a','b','c'],
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'grid': ['a','b','c'],
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'size': ['x','y','z'],
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'size': ['x','y','z'],
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@ -90,8 +94,8 @@ for file in files:
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for header in theTable.info:
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for header in theTable.info:
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headitems = map(str.lower,header.split())
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headitems = map(str.lower,header.split())
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if len(headitems) == 0: continue
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if len(headitems) == 0: continue
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if headitems[0] == 'resolution': headitems[0] = 'grid'
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for synonym,alternatives in synonyms.iteritems():
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if headitems[0] == 'dimension': headitems[0] = 'size'
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if headitems[0] in alternatives: headitems[0] = synonym
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if headitems[0] in mappings.keys():
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if headitems[0] in mappings.keys():
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if headitems[0] in identifiers.keys():
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if headitems[0] in identifiers.keys():
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for i in xrange(len(identifiers[headitems[0]])):
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for i in xrange(len(identifiers[headitems[0]])):
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