returns vtk object
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@ -914,16 +914,16 @@ class Geom:
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v.save('GrainBoundaries')
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v.save('GrainBoundaries')
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def get_grain_boundaries(self,periodic=True,direction='xyz'):
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def get_grain_boundaries(self,periodic=True,direction='x'):
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"""
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"""
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Create VTK files to show grain boundaries as feature edges.
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Create mesh in VTK to show grain boundaries as feature edges.
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Parameters
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Parameters
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----------
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----------
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periodic : Boolean, optional
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periodic : Boolean, optional
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Show boundaries at periodic nodes too. Defaults to True.
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Show boundaries at periodic nodes too. Defaults to True.
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direction : string
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direction : string
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Show grain boundaries only across certain directions. [X=0,Y=1,Z=2]. Defaults to all possible.
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Show grain boundaries only across a certain direction. ['x','y','z']
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"""
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"""
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coord=grid_filters.node_coord0(self.grid,self.size,self.origin).reshape(-1,3,order='F')
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coord=grid_filters.node_coord0(self.grid,self.size,self.origin).reshape(-1,3,order='F')
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@ -932,21 +932,17 @@ class Geom:
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o = [[0, self.grid[0]+1, np.prod(self.grid[:2]+1)+self.grid[0]+1, np.prod(self.grid[:2]+1)],
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o = [[0, self.grid[0]+1, np.prod(self.grid[:2]+1)+self.grid[0]+1, np.prod(self.grid[:2]+1)],
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[0, np.prod(self.grid[:2]+1), np.prod(self.grid[:2]+1)+1, 1],
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[0, np.prod(self.grid[:2]+1), np.prod(self.grid[:2]+1)+1, 1],
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[0, 1, self.grid[0]+1+1, self.grid[0]+1]]
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[0, 1, self.grid[0]+1+1, self.grid[0]+1]]
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for d_s in [ord(i)-120 for i in direction]:
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d_s=ord(direction)-120 # x=0, y=1, z=2
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mask = self.material != np.roll(self.material,1,d_s)
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mask = self.material != np.roll(self.material,1,d_s)
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for d in [0,1,2]:
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for d in [0,1,2]:
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extra_layer = np.take(mask,[0],d) if d_s == d else np.zeros_like(np.take(mask,[0],d),bool)
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extra_layer = np.take(mask,[0],d) if d_s == d else np.zeros_like(np.take(mask,[0],d),bool)
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mask = np.concatenate((mask,extra_layer),d)
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mask = np.concatenate((mask,extra_layer),d)
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eval(f"if periodic: mask[{'0' if d_s==0 else ':'}"+f",{'0' if d_s==1 else ':'}"+ f",{'0' if d_s==2 else ':'}]= \
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if d_s == 0 and periodic: mask[0,:,:] = mask[-1,:,:] = False
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[] mask[{'-1' if d_s==0 else ':'}"+f",{'-1' if d_s==1 else ':'}"+ f",{'-1' if d_s==2 else ':'}]=False")
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if d_s == 1 and periodic: mask[:,0,:] = mask[:,-1,:] = False
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if d_s == 0 and periodic: mask[0,:,:] = mask[-1,:,:] = False
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if d_s == 2 and periodic: mask[:,:,0] = mask[:,:,-1] = False
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if d_s == 1 and periodic: mask[:,0,:] = mask[:,-1,:] = False
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base_nodes = np.argwhere(mask.flatten(order='F')).reshape(-1,1)
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if d_s == 2 and periodic: mask[:,:,0] = mask[:,:,-1] = False
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connectivity = np.block([base_nodes + o[d_s][d] for d in range(4)])
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#eval('if periodic: mask['+','.join(['0' if d_s==d else ':' for d in range(3)])+']=\
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return VTK.from_unstructuredGrid(coord,connectivity,'QUAD')
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#mask['+','.join(['-1' if d_s==d else ':' for d in range(3)])+']=False')
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base_nodes = np.argwhere(mask.flatten(order='F')).reshape(-1,1)
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connectivity = np.block([base_nodes + o[d_s][d] for d in range(4)])
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vtk=VTK.from_unstructuredGrid(coord,connectivity,'QUAD')
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vtk.save(f'GrainBoundaries{d_s}')
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