write marc displacements of nodes and IPs in HDF5 file
This commit is contained in:
f.basile
parent
072e15faa7
commit
cc18abb42d
2
PRIVATE
2
PRIVATE
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@ -1 +1 @@
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Subproject commit 8b9836aaf5798727d96a316a2eb27df03bbd2d07
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Subproject commit 4b563623162f033b11d9d0ac95fc421de279f690
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@ -72,7 +72,6 @@ contains
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!--------------------------------------------------------------------------------------------------
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subroutine CPFEM_initAll
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call parallelization_init
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call DAMASK_interface_init
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call prec_init
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call IO_init
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@ -7,20 +7,6 @@
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!> @author Christoph Kords, Max-Planck-Institut für Eisenforschung GmbH
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!> @author Martin Diehl, Max-Planck-Institut für Eisenforschung GmbH
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!> @brief Interfaces DAMASK with MSC.Marc
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!> @details Usage:
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!> @details - choose material as hypela2
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!> @details - set statevariable 2 to index of homogenization
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!> @details - set statevariable 3 to index of microstructure
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!> @details - use nonsymmetric option for solver (e.g. direct profile or multifrontal sparse, the latter seems to be faster!)
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!> @details - in case of ddm (domain decomposition) a SYMMETRIC solver has to be used, i.e uncheck "non-symmetric"
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!> @details Marc subroutines used:
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!> @details - hypela2
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!> @details - uedinc
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!> @details - flux
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!> @details - quit
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!> @details Marc common blocks included:
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!> @details - concom: lovl, inc
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!> @details - creeps: timinc
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!--------------------------------------------------------------------------------------------------
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#define QUOTE(x) #x
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#define PASTE(x,y) x ## y
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@ -65,14 +51,8 @@ subroutine DAMASK_interface_init
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print'(/,a)', ' Version: '//DAMASKVERSION
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! https://github.com/jeffhammond/HPCInfo/blob/master/docs/Preprocessor-Macros.md
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#if __INTEL_COMPILER >= 1800
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print'(/,a)', ' Compiled with: '//compiler_version()
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print'(a)', ' Compiler options: '//compiler_options()
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#else
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print'(/,a,i4.4,a,i8.8)', ' Compiled with Intel fortran version :', __INTEL_COMPILER,&
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', build date :', __INTEL_COMPILER_BUILD_DATE
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#endif
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print'(/,a)', ' Compiled with: '//compiler_version()
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print'(a)', ' Compiler options: '//compiler_options()
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print'(/,a)', ' Compiled on: '//__DATE__//' at '//__TIME__
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@ -239,7 +219,7 @@ subroutine hypela2(d,g,e,de,s,t,dt,ngens,m,nn,kcus,matus,ndi,nshear,disp, &
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real(pReal), dimension(6) :: stress
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real(pReal), dimension(6,6) :: ddsdde
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integer :: computationMode, i, cp_en, node, CPnodeID
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integer(4) :: defaultNumThreadsInt !< default value set by Marc
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integer(pI32) :: defaultNumThreadsInt !< default value set by Marc
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integer(pInt), save :: &
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theInc = -1_pInt, & !< needs description
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@ -250,13 +230,13 @@ subroutine hypela2(d,g,e,de,s,t,dt,ngens,m,nn,kcus,matus,ndi,nshear,disp, &
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logical, save :: &
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lastIncConverged = .false., & !< needs description
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outdatedByNewInc = .false., & !< needs description
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CPFEM_init_done = .false., & !< remember whether init has been done already
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CPFEM_init_done = .false., & !< remember whether init has been done already
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debug_basic = .true.
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class(tNode), pointer :: &
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debug_Marc ! pointer to Marc debug options
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if(debug_basic) then
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print'(a,/,i8,i8,i2)', ' MSC.MARC information on shape of element(2), IP:', m, nn
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print'(a,/,i8,i8,i2)', ' MSC.Marc information on shape of element(2), IP:', m, nn
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print'(a,2(i1))', ' Jacobian: ', ngens,ngens
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print'(a,i1)', ' Direct stress: ', ndi
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print'(a,i1)', ' Shear stress: ', nshear
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@ -271,7 +251,7 @@ subroutine hypela2(d,g,e,de,s,t,dt,ngens,m,nn,kcus,matus,ndi,nshear,disp, &
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endif
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defaultNumThreadsInt = omp_get_num_threads() ! remember number of threads set by Marc
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call omp_set_num_threads(1) ! no openMP
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call omp_set_num_threads(1_pI32) ! no openMP
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if (.not. CPFEM_init_done) then
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CPFEM_init_done = .true.
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@ -379,14 +359,28 @@ subroutine flux(f,ts,n,time)
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subroutine uedinc(inc,incsub)
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use prec
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use CPFEM
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use discretization_marc
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implicit none
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integer, intent(in) :: inc, incsub
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integer :: n, nqncomp, nqdatatype
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integer, save :: inc_written
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real(pReal), allocatable, dimension(:,:) :: d_n
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#include QUOTE(PASTE(./marc/include/creeps,Marc4DAMASK)) ! creeps is needed for timinc (time increment)
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if (inc > inc_written) then
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allocate(d_n(3,size(mesh_FEM2DAMASK_node)))
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do n = 1, size(d_n,2)
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if (mesh_FEM2DAMASK_node(n) /= -1) then
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call nodvar(1,n,d_n(1:3,mesh_FEM2DAMASK_node(n)),nqncomp,nqdatatype)
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if(nqncomp == 2) d_n(3,mesh_FEM2DAMASK_node(n)) = 0.0_pReal
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endif
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enddo
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call discretization_marc_UpdateNodeAndIpCoords(d_n)
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call CPFEM_results(inc,cptim)
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inc_written = inc
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endif
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@ -686,7 +686,7 @@ module element
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1, 5,11, 7, 8,12,15,14, &
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5, 2, 6,11,12, 9,13,15, &
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7,11, 6, 3,14,15,13,10, &
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8,12,15, 4, 4, 9,13,10 &
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8,12,15,14, 4, 9,13,10 &
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#if !defined(__GFORTRAN__)
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],shape(CELL6))
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#else
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@ -20,6 +20,14 @@ module discretization_marc
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implicit none
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private
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real(pReal), public, protected :: &
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mesh_unitlength !< physical length of one unit in mesh MD: needs systematic_name
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integer, dimension(:), allocatable, public, protected :: &
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mesh_FEM2DAMASK_elem, & !< DAMASK element ID for Marc element ID MD: Needs systematic name
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mesh_FEM2DAMASK_node !< DAMASK node ID for Marc node ID MD: needs systematic_name
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type tCellNodeDefinition
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integer, dimension(:,:), allocatable :: parents
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integer, dimension(:,:), allocatable :: weights
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@ -27,15 +35,12 @@ module discretization_marc
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type(tCellNodeDefinition), dimension(:), allocatable :: cellNodeDefinition
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real(pReal), public, protected :: &
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mesh_unitlength !< physical length of one unit in mesh
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integer, dimension(:), allocatable, public :: &
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mesh_FEM2DAMASK_elem, & !< DAMASK element ID for Marc element ID
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mesh_FEM2DAMASK_node !< DAMASK node ID for Marc node ID
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integer, dimension(:,:,:), allocatable :: &
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connectivity_cell !< cell connectivity for each element,ip/cell
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public :: &
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discretization_marc_init
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discretization_marc_init, &
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discretization_marc_UpdateNodeAndIpCoords
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contains
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@ -45,25 +50,22 @@ contains
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!--------------------------------------------------------------------------------------------------
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subroutine discretization_marc_init
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real(pReal), dimension(:,:), allocatable :: &
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real(pReal), dimension(:,:), allocatable :: &
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node0_elem, & !< node x,y,z coordinates (initially!)
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node0_cell
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type(tElement) :: elem
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integer, dimension(:), allocatable :: &
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integer, dimension(:), allocatable :: &
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materialAt
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integer:: &
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Nnodes, & !< total number of nodes in the mesh
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Nelems, & !< total number of elements in the mesh
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debug_e, debug_i
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real(pReal), dimension(:,:), allocatable :: &
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real(pReal), dimension(:,:), allocatable :: &
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IP_reshaped
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integer,dimension(:,:,:), allocatable :: &
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connectivity_cell !< cell connectivity for each element,ip/cell
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integer, dimension(:,:), allocatable :: &
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integer, dimension(:,:), allocatable :: &
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connectivity_elem
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real(pReal), dimension(:,:,:,:),allocatable :: &
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real(pReal), dimension(:,:,:,:), allocatable :: &
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unscaledNormals
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class(tNode), pointer :: &
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@ -90,18 +92,14 @@ subroutine discretization_marc_init
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allocate(cellNodeDefinition(elem%nNodes-1))
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allocate(connectivity_cell(elem%NcellNodesPerCell,elem%nIPs,nElems))
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call buildCells(connectivity_cell,cellNodeDefinition,&
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elem,connectivity_elem)
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allocate(node0_cell(3,maxval(connectivity_cell)))
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call buildCellNodes(node0_cell,&
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cellNodeDefinition,node0_elem)
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allocate(IP_reshaped(3,elem%nIPs*nElems),source=0.0_pReal)
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call buildIPcoordinates(IP_reshaped,reshape(connectivity_cell,[elem%NcellNodesPerCell,&
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elem%nIPs*nElems]),node0_cell)
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node0_cell = buildCellNodes(node0_elem)
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IP_reshaped = buildIPcoordinates(node0_cell)
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call discretization_init(materialAt,&
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IP_reshaped,&
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node0_cell)
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call discretization_init(materialAt, IP_reshaped, node0_cell)
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call writeGeometry(elem,connectivity_elem,&
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reshape(connectivity_cell,[elem%NcellNodesPerCell,elem%nIPs*nElems]),&
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@ -109,55 +107,65 @@ subroutine discretization_marc_init
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!--------------------------------------------------------------------------------------------------
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! geometry information required by the nonlocal CP model
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call geometry_plastic_nonlocal_setIPvolume(IPvolume(elem,node0_cell,connectivity_cell))
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unscaledNormals = IPareaNormal(elem,nElems,connectivity_cell,node0_cell)
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call geometry_plastic_nonlocal_setIPvolume(IPvolume(elem,node0_cell))
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unscaledNormals = IPareaNormal(elem,nElems,node0_cell)
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call geometry_plastic_nonlocal_setIParea(norm2(unscaledNormals,1))
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call geometry_plastic_nonlocal_setIPareaNormal(unscaledNormals/spread(norm2(unscaledNormals,1),1,3))
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call geometry_plastic_nonlocal_setIPneighborhood(IPneighborhood(elem,connectivity_cell))
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call geometry_plastic_nonlocal_setIPneighborhood(IPneighborhood(elem))
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call geometry_plastic_nonlocal_results
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end subroutine discretization_marc_init
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!--------------------------------------------------------------------------------------------------
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!> @brief Calculate and set current nodal and IP positions (including cell nodes)
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!--------------------------------------------------------------------------------------------------
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subroutine discretization_marc_UpdateNodeAndIpCoords(d_n)
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real(pReal), dimension(:,:), intent(in) :: d_n
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real(pReal), dimension(:,:), allocatable :: node_cell
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node_cell = buildCellNodes(discretization_NodeCoords0(1:3,1:maxval(mesh_FEM2DAMASK_node)) + d_n)
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call discretization_setNodeCoords(node_cell)
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call discretization_setIPcoords(buildIPcoordinates(node_cell))
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end subroutine discretization_marc_UpdateNodeAndIpCoords
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!--------------------------------------------------------------------------------------------------
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!> @brief Write all information needed for the DADF5 geometry
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!--------------------------------------------------------------------------------------------------
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subroutine writeGeometry(elem, &
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connectivity_elem,connectivity_cell, &
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connectivity_elem,connectivity_cell_reshaped, &
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coordinates_nodes,coordinates_points)
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type(tElement), intent(in) :: &
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elem
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integer, dimension(:,:), intent(in) :: &
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connectivity_elem, &
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connectivity_cell
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connectivity_cell_reshaped
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real(pReal), dimension(:,:), intent(in) :: &
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coordinates_nodes, &
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coordinates_points
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integer, dimension(:,:), allocatable :: &
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connectivity_temp
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real(pReal), dimension(:,:), allocatable :: &
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coordinates_temp
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call results_openJobFile
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call results_closeGroup(results_addGroup('geometry'))
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connectivity_temp = connectivity_elem
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call results_writeDataset('geometry',connectivity_temp,'T_e',&
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call results_writeDataset('geometry',connectivity_elem,'T_e',&
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'connectivity of the elements','-')
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connectivity_temp = connectivity_cell
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call results_writeDataset('geometry',connectivity_temp,'T_c', &
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call results_writeDataset('geometry',connectivity_cell_reshaped,'T_c', &
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'connectivity of the cells','-')
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call results_addAttribute('VTK_TYPE',elem%vtkType,'geometry/T_c')
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coordinates_temp = coordinates_nodes
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call results_writeDataset('geometry',coordinates_temp,'x_n', &
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call results_writeDataset('geometry',coordinates_nodes,'x_n', &
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'initial coordinates of the nodes','m')
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coordinates_temp = coordinates_points
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call results_writeDataset('geometry',coordinates_temp,'x_p', &
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call results_writeDataset('geometry',coordinates_points,'x_p', &
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'initial coordinates of the materialpoints (cell centers)','m')
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call results_closeJobFile
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@ -186,13 +194,13 @@ subroutine inputRead(elem,node0_elem,connectivity_elem,materialAt)
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nElems
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integer, dimension(:), allocatable :: &
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matNumber !< material numbers for hypoelastic material
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character(len=pStringLen), dimension(:), allocatable :: inputFile !< file content, separated per lines
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character(len=pStringLen), dimension(:), allocatable :: &
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inputFile, & !< file content, separated per lines
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nameElemSet
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integer, dimension(:,:), allocatable :: &
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mapElemSet !< list of elements in elementSet
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inputFile = IO_readlines(trim(getSolverJobName())//trim(InputFileExtension))
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call inputRead_fileFormat(fileFormatVersion, &
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inputFile)
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@ -588,20 +596,20 @@ subroutine inputRead_elemType(elem, &
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mapElemtype = 1 ! Two-dimensional Plane Strain Triangle
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case ( '125') ! 155, 128 (need test)
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mapElemtype = 2 ! Two-dimensional Plane Strain triangle (155: cubic shape function, 125/128: second order isoparametric)
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!case ( '11') ! need test
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! mapElemtype = 3 ! Arbitrary Quadrilateral Plane-strain
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case ( '11')
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mapElemtype = 3 ! Arbitrary Quadrilateral Plane-strain
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case ( '27')
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mapElemtype = 4 ! Plane Strain, Eight-node Distorted Quadrilateral
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case ( '54')
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mapElemtype = 5 ! Plane Strain, Eight-node Distorted Quadrilateral with reduced integration
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!case ( '134') ! need test
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! mapElemtype = 6 ! Three-dimensional Four-node Tetrahedron
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case ( '134')
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mapElemtype = 6 ! Three-dimensional Four-node Tetrahedron
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!case ( '157') ! need test
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! mapElemtype = 7 ! Three-dimensional, Low-order, Tetrahedron, Herrmann Formulations
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!case ( '127') ! need test
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! mapElemtype = 8 ! Three-dimensional Ten-node Tetrahedron
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!case ( '136') ! need test
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! mapElemtype = 9 ! Three-dimensional Arbitrarily Distorted Pentahedral
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case ( '127')
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mapElemtype = 8 ! Three-dimensional Ten-node Tetrahedron
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case ( '136')
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mapElemtype = 9 ! Three-dimensional Arbitrarily Distorted Pentahedral
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case ( '117') ! 123 (need test)
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mapElemtype = 10 ! Three-dimensional Arbitrarily Distorted linear hexahedral with reduced integration
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case ( '7')
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@ -727,11 +735,11 @@ end subroutine inputRead_material
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!--------------------------------------------------------------------------------------------------
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!> @brief Calculates cell node coordinates from element node coordinates
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!--------------------------------------------------------------------------------------------------
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pure subroutine buildCells(connectivity_cell,cellNodeDefinition, &
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pure subroutine buildCells(connectivity,definition, &
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elem,connectivity_elem)
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type(tCellNodeDefinition), dimension(:), intent(out) :: cellNodeDefinition ! definition of cell nodes for increasing number of parents
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integer, dimension(:,:,:),intent(out) :: connectivity_cell
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type(tCellNodeDefinition), dimension(:), intent(out) :: definition ! definition of cell nodes for increasing number of parents
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integer, dimension(:,:,:),intent(out) :: connectivity
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type(tElement), intent(in) :: elem ! element definition
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integer, dimension(:,:), intent(in) :: connectivity_elem ! connectivity of the elements
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@ -745,7 +753,7 @@ pure subroutine buildCells(connectivity_cell,cellNodeDefinition, &
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!---------------------------------------------------------------------------------------------------
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! initialize global connectivity to negative local connectivity
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connectivity_cell = -spread(elem%cell,3,Nelem) ! local cell node ID
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connectivity = -spread(elem%cell,3,Nelem) ! local cell node ID
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!---------------------------------------------------------------------------------------------------
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! set connectivity of cell nodes that coincide with FE nodes (defined by 1 parent node)
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@ -753,9 +761,7 @@ pure subroutine buildCells(connectivity_cell,cellNodeDefinition, &
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do e = 1, Nelem
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do c = 1, elem%NcellNodes
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realNode: if (count(elem%cellNodeParentNodeWeights(:,c) /= 0) == 1) then
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where(connectivity_cell(:,:,e) == -c)
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connectivity_cell(:,:,e) = connectivity_elem(c,e)
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end where
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where(connectivity(:,:,e) == -c) connectivity(:,:,e) = connectivity_elem(c,e)
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endif realNode
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enddo
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enddo
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@ -821,8 +827,8 @@ pure subroutine buildCells(connectivity_cell,cellNodeDefinition, &
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enddo
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i = uniqueRows(candidates_global(1:2*nParentNodes,:))
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allocate(cellNodeDefinition(nParentNodes-1)%parents(i,nParentNodes))
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allocate(cellNodeDefinition(nParentNodes-1)%weights(i,nParentNodes))
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allocate(definition(nParentNodes-1)%parents(i,nParentNodes))
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allocate(definition(nParentNodes-1)%weights(i,nParentNodes))
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i = 1
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n = 1
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@ -836,15 +842,15 @@ pure subroutine buildCells(connectivity_cell,cellNodeDefinition, &
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do while (n+j<= size(candidates_local)*Nelem)
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if (any(candidates_global(1:2*nParentNodes,n+j)/=candidates_global(1:2*nParentNodes,n))) exit
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where (connectivity_cell(:,:,candidates_global(nParentNodes*2+1,n+j)) == -candidates_global(nParentNodes*2+2,n+j)) ! still locally defined
|
||||
connectivity_cell(:,:,candidates_global(nParentNodes*2+1,n+j)) = nCellNode + 1 ! gets current new cell node id
|
||||
where (connectivity(:,:,candidates_global(nParentNodes*2+1,n+j)) == -candidates_global(nParentNodes*2+2,n+j)) ! still locally defined
|
||||
connectivity(:,:,candidates_global(nParentNodes*2+1,n+j)) = nCellNode + 1 ! gets current new cell node id
|
||||
end where
|
||||
|
||||
j = j+1
|
||||
enddo
|
||||
nCellNode = nCellNode + 1
|
||||
cellNodeDefinition(nParentNodes-1)%parents(i,:) = parentsAndWeights(:,1)
|
||||
cellNodeDefinition(nParentNodes-1)%weights(i,:) = parentsAndWeights(:,2)
|
||||
definition(nParentNodes-1)%parents(i,:) = parentsAndWeights(:,1)
|
||||
definition(nParentNodes-1)%weights(i,:) = parentsAndWeights(:,2)
|
||||
i = i + 1
|
||||
n = n+j
|
||||
enddo
|
||||
|
|
@ -884,55 +890,62 @@ end subroutine buildCells
|
|||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief Calculates cell node coordinates from element node coordinates
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
pure subroutine buildCellNodes(node_cell, &
|
||||
definition,node_elem)
|
||||
pure function buildCellNodes(node_elem)
|
||||
|
||||
real(pReal), dimension(:,:), intent(out) :: node_cell !< cell node coordinates
|
||||
type(tCellNodeDefinition), dimension(:), intent(in) :: definition !< cell node definition (weights and parents)
|
||||
real(pReal), dimension(:,:), intent(in) :: node_elem !< element nodes
|
||||
real(pReal), dimension(:,:), allocatable :: buildCellNodes !< cell node coordinates
|
||||
|
||||
integer :: i, j, k, n
|
||||
|
||||
n = size(node_elem,2)
|
||||
node_cell(:,1:n) = node_elem !< initial nodes coincide with element nodes
|
||||
|
||||
do i = 1, size(cellNodeDefinition,1)
|
||||
allocate(buildCellNodes(3,maxval(connectivity_cell)))
|
||||
n = size(node_elem,2)
|
||||
buildCellNodes(:,1:n) = node_elem !< initial nodes coincide with element nodes
|
||||
|
||||
do i = 1, size(cellNodeDefinition)
|
||||
do j = 1, size(cellNodeDefinition(i)%parents,1)
|
||||
n = n+1
|
||||
node_cell(:,n) = 0.0_pReal
|
||||
buildCellNodes(:,n) = 0.0_pReal
|
||||
do k = 1, size(cellNodeDefinition(i)%parents,2)
|
||||
node_cell(:,n) = node_cell(:,n) &
|
||||
+ node_cell(:,definition(i)%parents(j,k)) * real(definition(i)%weights(j,k),pReal)
|
||||
buildCellNodes(:,n) = buildCellNodes(:,n) &
|
||||
+ buildCellNodes(:,cellNodeDefinition(i)%parents(j,k)) &
|
||||
* real(cellNodeDefinition(i)%weights(j,k),pReal)
|
||||
enddo
|
||||
node_cell(:,n) = node_cell(:,n)/real(sum(definition(i)%weights(j,:)),pReal)
|
||||
buildCellNodes(:,n) = buildCellNodes(:,n)/real(sum(cellNodeDefinition(i)%weights(j,:)),pReal)
|
||||
enddo
|
||||
enddo
|
||||
|
||||
end subroutine buildCellNodes
|
||||
end function buildCellNodes
|
||||
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief Calculates IP coordinates as center of cell
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
pure subroutine buildIPcoordinates(IPcoordinates, &
|
||||
connectivity_cell,node_cell)
|
||||
pure function buildIPcoordinates(node_cell)
|
||||
|
||||
real(pReal), dimension(:,:), intent(out):: IPcoordinates !< cell-center/IP coordinates
|
||||
integer, dimension(:,:), intent(in) :: connectivity_cell !< connectivity for each cell
|
||||
real(pReal), dimension(:,:), intent(in) :: node_cell !< cell node coordinates
|
||||
real(pReal), dimension(:,:), intent(in) :: node_cell !< cell node coordinates
|
||||
real(pReal), dimension(:,:), allocatable :: buildIPcoordinates !< cell-center/IP coordinates
|
||||
|
||||
integer :: i, n
|
||||
integer, dimension(:,:), allocatable :: connectivity_cell_reshaped
|
||||
integer :: i, n, NcellNodesPerCell,Ncells
|
||||
|
||||
do i = 1, size(connectivity_cell,2)
|
||||
IPcoordinates(:,i) = 0.0_pReal
|
||||
do n = 1, size(connectivity_cell,1)
|
||||
IPcoordinates(:,i) = IPcoordinates(:,i) &
|
||||
+ node_cell(:,connectivity_cell(n,i))
|
||||
|
||||
NcellNodesPerCell = size(connectivity_cell,1)
|
||||
Ncells = size(connectivity_cell,2)*size(connectivity_cell,3)
|
||||
connectivity_cell_reshaped = reshape(connectivity_cell,[NcellNodesPerCell,Ncells])
|
||||
|
||||
allocate(buildIPcoordinates(3,Ncells))
|
||||
|
||||
do i = 1, size(connectivity_cell_reshaped,2)
|
||||
buildIPcoordinates(:,i) = 0.0_pReal
|
||||
do n = 1, size(connectivity_cell_reshaped,1)
|
||||
buildIPcoordinates(:,i) = buildIPcoordinates(:,i) &
|
||||
+ node_cell(:,connectivity_cell_reshaped(n,i))
|
||||
enddo
|
||||
IPcoordinates(:,i) = IPcoordinates(:,i)/real(size(connectivity_cell,1),pReal)
|
||||
buildIPcoordinates(:,i) = buildIPcoordinates(:,i)/real(size(connectivity_cell_reshaped,1),pReal)
|
||||
enddo
|
||||
|
||||
end subroutine buildIPcoordinates
|
||||
end function buildIPcoordinates
|
||||
|
||||
|
||||
!---------------------------------------------------------------------------------------------------
|
||||
|
|
@ -940,50 +953,50 @@ end subroutine buildIPcoordinates
|
|||
!> @details The IP volume is calculated differently depending on the cell type.
|
||||
!> 2D cells assume an element depth of 1.0
|
||||
!---------------------------------------------------------------------------------------------------
|
||||
pure function IPvolume(elem,node,connectivity)
|
||||
pure function IPvolume(elem,node)
|
||||
|
||||
type(tElement), intent(in) :: elem
|
||||
real(pReal), dimension(:,:), intent(in) :: node
|
||||
integer, dimension(:,:,:), intent(in) :: connectivity
|
||||
|
||||
real(pReal), dimension(elem%nIPs,size(connectivity,3)) :: IPvolume
|
||||
real(pReal), dimension(elem%nIPs,size(connectivity_cell,3)) :: IPvolume
|
||||
real(pReal), dimension(3) :: x0,x1,x2,x3,x4,x5,x6,x7
|
||||
|
||||
integer :: e,i
|
||||
|
||||
do e = 1,size(connectivity,3)
|
||||
|
||||
do e = 1,size(connectivity_cell,3)
|
||||
do i = 1,elem%nIPs
|
||||
|
||||
select case (elem%cellType)
|
||||
case (1) ! 2D 3node
|
||||
IPvolume(i,e) = math_areaTriangle(node(1:3,connectivity(1,i,e)), &
|
||||
node(1:3,connectivity(2,i,e)), &
|
||||
node(1:3,connectivity(3,i,e)))
|
||||
IPvolume(i,e) = math_areaTriangle(node(1:3,connectivity_cell(1,i,e)), &
|
||||
node(1:3,connectivity_cell(2,i,e)), &
|
||||
node(1:3,connectivity_cell(3,i,e)))
|
||||
|
||||
case (2) ! 2D 4node
|
||||
IPvolume(i,e) = math_areaTriangle(node(1:3,connectivity(1,i,e)), & ! assume planar shape, division in two triangles suffices
|
||||
node(1:3,connectivity(2,i,e)), &
|
||||
node(1:3,connectivity(3,i,e))) &
|
||||
+ math_areaTriangle(node(1:3,connectivity(3,i,e)), &
|
||||
node(1:3,connectivity(4,i,e)), &
|
||||
node(1:3,connectivity(1,i,e)))
|
||||
IPvolume(i,e) = math_areaTriangle(node(1:3,connectivity_cell(1,i,e)), & ! assume planar shape, division in two triangles suffices
|
||||
node(1:3,connectivity_cell(2,i,e)), &
|
||||
node(1:3,connectivity_cell(3,i,e))) &
|
||||
+ math_areaTriangle(node(1:3,connectivity_cell(3,i,e)), &
|
||||
node(1:3,connectivity_cell(4,i,e)), &
|
||||
node(1:3,connectivity_cell(1,i,e)))
|
||||
case (3) ! 3D 4node
|
||||
IPvolume(i,e) = math_volTetrahedron(node(1:3,connectivity(1,i,e)), &
|
||||
node(1:3,connectivity(2,i,e)), &
|
||||
node(1:3,connectivity(3,i,e)), &
|
||||
node(1:3,connectivity(4,i,e)))
|
||||
IPvolume(i,e) = math_volTetrahedron(node(1:3,connectivity_cell(1,i,e)), &
|
||||
node(1:3,connectivity_cell(2,i,e)), &
|
||||
node(1:3,connectivity_cell(3,i,e)), &
|
||||
node(1:3,connectivity_cell(4,i,e)))
|
||||
case (4) ! 3D 8node
|
||||
! J. Grandy, Efficient Calculation of Volume of Hexahedral Cells
|
||||
! Lawrence Livermore National Laboratory
|
||||
! https://www.osti.gov/servlets/purl/632793
|
||||
x0 = node(1:3,connectivity(1,i,e))
|
||||
x1 = node(1:3,connectivity(2,i,e))
|
||||
x2 = node(1:3,connectivity(4,i,e))
|
||||
x3 = node(1:3,connectivity(3,i,e))
|
||||
x4 = node(1:3,connectivity(5,i,e))
|
||||
x5 = node(1:3,connectivity(6,i,e))
|
||||
x6 = node(1:3,connectivity(8,i,e))
|
||||
x7 = node(1:3,connectivity(7,i,e))
|
||||
x0 = node(1:3,connectivity_cell(1,i,e))
|
||||
x1 = node(1:3,connectivity_cell(2,i,e))
|
||||
x2 = node(1:3,connectivity_cell(4,i,e))
|
||||
x3 = node(1:3,connectivity_cell(3,i,e))
|
||||
x4 = node(1:3,connectivity_cell(5,i,e))
|
||||
x5 = node(1:3,connectivity_cell(6,i,e))
|
||||
x6 = node(1:3,connectivity_cell(8,i,e))
|
||||
x7 = node(1:3,connectivity_cell(7,i,e))
|
||||
IPvolume(i,e) = dot_product((x7-x1)+(x6-x0),math_cross((x7-x2), (x3-x0))) &
|
||||
+ dot_product((x6-x0), math_cross((x7-x2)+(x5-x0),(x7-x4))) &
|
||||
+ dot_product((x7-x1), math_cross((x5-x0), (x7-x4)+(x3-x0)))
|
||||
|
|
@ -998,11 +1011,10 @@ end function IPvolume
|
|||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief calculation of IP interface areas
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
pure function IPareaNormal(elem,nElem,connectivity,node)
|
||||
pure function IPareaNormal(elem,nElem,node)
|
||||
|
||||
type(tElement), intent(in) :: elem
|
||||
integer, intent(in) :: nElem
|
||||
integer, dimension(:,:,:), intent(in) :: connectivity
|
||||
real(pReal), dimension(:,:), intent(in) :: node
|
||||
|
||||
real(pReal), dimension(3,elem%nIPneighbors,elem%nIPs,nElem) :: ipAreaNormal
|
||||
|
|
@ -1015,7 +1027,7 @@ pure function IPareaNormal(elem,nElem,connectivity,node)
|
|||
do e = 1,nElem
|
||||
do i = 1,elem%nIPs
|
||||
do f = 1,elem%nIPneighbors
|
||||
nodePos = node(1:3,connectivity(elem%cellface(1:m,f),i,e))
|
||||
nodePos = node(1:3,connectivity_cell(elem%cellface(1:m,f),i,e))
|
||||
|
||||
select case (elem%cellType)
|
||||
case (1,2) ! 2D 3 or 4 node
|
||||
|
|
@ -1046,23 +1058,22 @@ end function IPareaNormal
|
|||
!--------------------------------------------------------------------------------------------------
|
||||
!> @brief IP neighborhood
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
function IPneighborhood(elem,connectivity)
|
||||
function IPneighborhood(elem)
|
||||
|
||||
type(tElement), intent(in) :: elem ! definition of the element in use
|
||||
integer, dimension(:,:,:), intent(in) :: connectivity ! cell connectivity
|
||||
integer, dimension(3,size(elem%cellFace,2), &
|
||||
size(connectivity,2),size(connectivity,3)) :: IPneighborhood ! neighboring IPs as [element ID, IP ID, face ID]
|
||||
size(connectivity_cell,2),size(connectivity_cell,3)) :: IPneighborhood ! neighboring IPs as [element ID, IP ID, face ID]
|
||||
|
||||
integer, dimension(size(elem%cellFace,1)+3,&
|
||||
size(elem%cellFace,2)*size(connectivity,2)*size(connectivity,3)) :: face
|
||||
integer, dimension(size(connectivity,1)) :: myConnectivity
|
||||
integer, dimension(size(elem%cellFace,1)) :: face_unordered
|
||||
size(elem%cellFace,2)*size(connectivity_cell,2)*size(connectivity_cell,3)) :: face
|
||||
integer, dimension(size(connectivity_cell,1)) :: myConnectivity
|
||||
integer, dimension(size(elem%cellFace,1)) :: face_unordered
|
||||
integer :: e,i,f,n,c,s
|
||||
|
||||
c = 0
|
||||
do e = 1, size(connectivity,3)
|
||||
do i = 1, size(connectivity,2)
|
||||
myConnectivity = connectivity(:,i,e)
|
||||
do e = 1, size(connectivity_cell,3)
|
||||
do i = 1, size(connectivity_cell,2)
|
||||
myConnectivity = connectivity_cell(:,i,e)
|
||||
do f = 1, size(elem%cellFace,2)
|
||||
c = c + 1
|
||||
face_unordered = myConnectivity(elem%cellFace(:,f))
|
||||
|
|
|
|||
|
|
@ -9,9 +9,8 @@ module parallelization
|
|||
#ifdef PETSc
|
||||
#include <petsc/finclude/petscsys.h>
|
||||
use petscsys
|
||||
#endif
|
||||
!$ use OMP_LIB
|
||||
|
||||
#endif
|
||||
use prec
|
||||
|
||||
implicit none
|
||||
|
|
@ -21,6 +20,7 @@ module parallelization
|
|||
worldrank = 0, & !< MPI worldrank (/=0 for MPI simulations only)
|
||||
worldsize = 1 !< MPI worldsize (/=1 for MPI simulations only)
|
||||
|
||||
#ifdef PETSc
|
||||
public :: &
|
||||
parallelization_init
|
||||
|
||||
|
|
@ -32,16 +32,12 @@ contains
|
|||
subroutine parallelization_init
|
||||
|
||||
integer :: err, typeSize
|
||||
!$ integer :: got_env, OMP_NUM_THREADS, threadLevel
|
||||
!$ integer :: got_env, threadLevel
|
||||
!$ integer(pI32) :: OMP_NUM_THREADS
|
||||
!$ character(len=6) NumThreadsString
|
||||
#ifdef PETSc
|
||||
|
||||
|
||||
PetscErrorCode :: petsc_err
|
||||
|
||||
#else
|
||||
print'(/,a)', ' <<<+- parallelization init -+>>>'; flush(OUTPUT_UNIT)
|
||||
#endif
|
||||
|
||||
#ifdef PETSc
|
||||
#ifdef _OPENMP
|
||||
! If openMP is enabled, check if the MPI libary supports it and initialize accordingly.
|
||||
! Otherwise, the first call to PETSc will do the initialization.
|
||||
|
|
@ -64,7 +60,7 @@ subroutine parallelization_init
|
|||
#endif
|
||||
CHKERRQ(petsc_err)
|
||||
|
||||
call MPI_Comm_rank(PETSC_COMM_WORLD,worldrank,err)
|
||||
call MPI_Comm_rank(PETSC_COMM_WORLD,worldrank,err)
|
||||
if (err /= 0) error stop 'Could not determine worldrank'
|
||||
|
||||
if (worldrank == 0) print'(/,a)', ' <<<+- parallelization init -+>>>'
|
||||
|
|
@ -80,7 +76,6 @@ call MPI_Comm_rank(PETSC_COMM_WORLD,worldrank,err)
|
|||
call MPI_Type_size(MPI_DOUBLE,typeSize,err)
|
||||
if (err /= 0) error stop 'Could not determine MPI real size'
|
||||
if (typeSize*8 /= storage_size(0.0_pReal)) error stop 'Mismatch between MPI and DAMASK real'
|
||||
#endif
|
||||
|
||||
if (worldrank /= 0) then
|
||||
close(OUTPUT_UNIT) ! disable output
|
||||
|
|
@ -102,5 +97,6 @@ call MPI_Comm_rank(PETSC_COMM_WORLD,worldrank,err)
|
|||
!$ call omp_set_num_threads(OMP_NUM_THREADS)
|
||||
|
||||
end subroutine parallelization_init
|
||||
#endif
|
||||
|
||||
end module parallelization
|
||||
|
|
|
|||
Loading…
Reference in New Issue