reference can now include comments!

examples/config/phase/Al.yaml

@@ -1,4 +1,4 @@
 references:
-  - en.wikipedia.org/wiki/Aluminium
+  - https://en.wikipedia.org/wiki/Aluminium
 lattice: cF
 rho: 2700.0

examples/config/phase/Au.yaml

@@ -1,4 +1,4 @@
 references:
-  - en.wikipedia.org/wiki/Gold
+  - https://en.wikipedia.org/wiki/Gold
 lattice: cF
 rho: 19300.0

examples/config/phase/Cu.yaml

@@ -1,4 +1,4 @@
 references:
-  - en.wikipedia.org/wiki/Copper
+  - https://en.wikipedia.org/wiki/Copper
 lattice: cF
 rho: 8960.0

examples/config/phase/Fe.yaml

@@ -1,4 +1,4 @@
 references:
-  - en.wikipedia.org/wiki/Iron
+  - https://en.wikipedia.org/wiki/Iron
 lattice: cI
 rho: 7874.0

examples/config/phase/Mg.yaml

@@ -1,7 +1,7 @@
 references:
   - D. Tromans,
-    International Journal of Recent Research and Applied Studies 6(4)/462-483, 2011,
+    International Journal of Recent Research and Applied Studies 6(4):462-483, 2011,
-    www.arpapress.com/Volumes/Vol6Issue4/IJRRAS_6_4_14.pdf
+    https://www.arpapress.com/Volumes/Vol6Issue4/IJRRAS_6_4_14.pdf
 lattice: hP
 c/a: 1.62350
 rho: 1740.0

examples/config/phase/Ni.yaml

@@ -1,4 +1,4 @@
 references:
-  - en.wikipedia.org/wiki/Nickel
+  - https://en.wikipedia.org/wiki/Nickel
 lattice: cF
 rho: 8908.0

examples/config/phase/Ti.yaml

@@ -1,6 +1,6 @@
 references:
-  - www.totalmateria.com/page.aspx?ID=CheckArticle&site=ktn&NM=221
+  - https://www.totalmateria.com/page.aspx?ID=CheckArticle&site=ktn&NM=221
-  - en.wikipedia.org/wiki/Titanium
+  - https://en.wikipedia.org/wiki/Titanium
 lattice: hP
 c/a: 1.587
 rho: 4506.0

examples/config/phase/W.yaml

@@ -1,4 +1,4 @@
 references:
-  - en.wikipedia.org/wiki/Tungsten
+  - https://en.wikipedia.org/wiki/Tungsten
 lattice: cF
 rho: 19300.0

examples/config/phase/mechanical/eigen/thermalexpansion_Al.yaml

@@ -1,5 +1,5 @@
 type: thermalexpansion
 references:
-  - en.wikipedia.org/wiki/Thermal_expansion
+  - https://en.wikipedia.org/wiki/Thermal_expansion
 A_11: 23.1e-6
 T_ref: 293.15

examples/config/phase/mechanical/eigen/thermalexpansion_Au.yaml

@@ -1,5 +1,5 @@
 type: thermalexpansion
 references:
-  - en.wikipedia.org/wiki/Thermal_expansion
+  - https://en.wikipedia.org/wiki/Thermal_expansion
 A_11: 14.e-6
 T_ref: 293.15

examples/config/phase/mechanical/eigen/thermalexpansion_C35E.yaml

@@ -1,6 +1,7 @@
 type: thermalexpansion
 references:
-  - en.wikipedia.org/wiki/Thermal_expansion, fitted from image description
+  - https://commons.wikimedia.org/wiki/File:Coefficient_dilatation_lineique_aciers.svg,
+    fitted from image description (Scilab code)
 A_11: 12.70371e-6
 A_11,T: 7.54e-9
 A_11,T^2: -1.0e-11

examples/config/phase/mechanical/eigen/thermalexpansion_Cu.yaml

@@ -1,5 +1,5 @@
 type: thermalexpansion
 references:
-  - en.wikipedia.org/wiki/Thermal_expansion
+  - https://en.wikipedia.org/wiki/Thermal_expansion
 A_11: 17.e-6
 T_ref: 293.15

examples/config/phase/mechanical/eigen/thermalexpansion_Fe.yaml

@@ -1,5 +1,5 @@
 type: thermalexpansion
 references:
-  - en.wikipedia.org/wiki/Thermal_expansion
+  - https://en.wikipedia.org/wiki/Thermal_expansion
 A_11: 11.8e-6
 T_ref: 293.15

examples/config/phase/mechanical/eigen/thermalexpansion_W.yaml

@@ -1,5 +1,5 @@
 type: thermalexpansion
 references:
-  - en.wikipedia.org/wiki/Thermal_expansion
+  - https://en.wikipedia.org/wiki/Thermal_expansion
 A_11: 4.5e-6
 T_ref: 293.15

examples/config/phase/mechanical/eigen/thermalexpansion_X20Cr13.yaml

@@ -1,6 +1,7 @@
 type: thermalexpansion
 references:
-  - en.wikipedia.org/wiki/Thermal_expansion, fitted from image description
+  - https://commons.wikimedia.org/wiki/File:Coefficient_dilatation_lineique_aciers.svg
+    fitted from image description (Scilab code)
 A_11: 11.365e-6
 A_11,T: 5.0e-9
 T_ref: 273.0

examples/config/phase/mechanical/elastic/Hooke_Al.yaml

@@ -1,8 +1,8 @@
 type: Hooke
 references:
   - J. Vallin et al.,
-    Journal of Applied Physics 35(6)/1825-1826, 1964,
+    Journal of Applied Physics 35(6):1825-1826, 1964,
-    10.1063/1.1713749
+    https://doi.org/10.1063/1.1713749
 C_11: 107.3e+9
 C_12: 60.8e+9
 C_44: 28.3e+9

examples/config/phase/mechanical/elastic/Hooke_Cu.yaml

@@ -1,6 +1,7 @@
 type: Hooke
 references:
-  - www.mit.edu/~6.777/matprops/copper.htm, fixed typo
+  - https://www.mit.edu/~6.777/matprops/copper.htm,
+    fixed typo
 C_11: 168.3e+9
 C_12: 122.1e+9
 C_44: 75.7e+9

examples/config/phase/mechanical/elastic/Hooke_Mg.yaml

@@ -1,8 +1,8 @@
 type: Hooke
 references:
   - D. Tromans,
-    International Journal of Recent Research and Applied Studies 6(4)/462-483, 2011,
+    International Journal of Recent Research and Applied Studies 6(4):462-483, 2011,
-    www.arpapress.com/Volumes/Vol6Issue4/IJRRAS_6_4_14.pdf
+    https://www.arpapress.com/Volumes/Vol6Issue4/IJRRAS_6_4_14.pdf
 C_11: 59.3e+9
 C_33: 61.5e+9
 C_44: 16.4e+9

examples/config/phase/mechanical/elastic/Hooke_TWIP-steel.yaml

@@ -1,11 +1,11 @@
 type: Hooke
 references:
   - D. Music et al.,
-    Applied Physics Letters 99(19)/191904, 2007,
+    Applied Physics Letters 99(19):191904, 2007,
-    10.1063/1.2807677
+    https://doi.org/10.1063/1.2807677
   - S.L. Wong et al.,
-    Acta Materialia 118/140-151, 2016,
+    Acta Materialia 118:140-151, 2016,
-    10.1016/j.actamat.2016.07.032
+    https://doi.org/10.1016/j.actamat.2016.07.032
 C_11: 175.0e+9
 C_12: 115.0e+9
 C_44: 135.0e+9

examples/config/phase/mechanical/elastic/Hooke_Ti.yaml

@@ -1,8 +1,8 @@
 type: Hooke
 references:
   - L. Wang et al.,
-    Acta Materialia 132/598-610, 2017,
+    Acta Materialia 132:598-610, 2017,
-    10.1016/j.actamat.2017.05.015
+    https://doi.org/10.1016/j.actamat.2017.05.015
 C_11: 162.4e+9
 C_33: 181.6e+9
 C_44: 47.2e+9

examples/config/phase/mechanical/elastic/Hooke_W.yaml

@@ -1,8 +1,8 @@
 type: Hooke
 references:
   - D. Cereceda et al.,
-    International Journal of Plasticity 78/242-265, 2016,
+    International Journal of Plasticity 78:242-265, 2016,
-    10.1016/j.ijplas.2015.09.002
+    https://doi.org/10.1016/j.ijplas.2015.09.002
 C_11: 523.e+9
 C_12: 202.e+9
 C_44: 161.e+9

examples/config/phase/mechanical/elastic/Hooke_vanishing-Poisson-ratio.yaml

@@ -1,8 +1,8 @@
 type: Hooke
 references:
   - T. Maiti and P. Eisenlohr,
-    Scripta Materialia 145/37-40, 2018,
+    Scripta Materialia 145:37-40, 2018,
-    10.1016/j.scriptamat.2017.09.047
+    https://doi.org/10.1016/j.scriptamat.2017.09.047
 C_11: 1.e+8
 C_12: 1.e+6
 C_44: 4.95e+7

examples/config/phase/mechanical/plastic/dislotwin_IF-steel.yaml

@@ -1,8 +1,8 @@
 type: dislotwin
 references:
   - K. Sedighiani et al.,
-    International Journal of Plasticity 134/102779, 2020,
+    International Journal of Plasticity 134:102779, 2020,
-    10.1016/j.ijplas.2020.102779
+    https://doi.org/10.1016/j.ijplas.2020.102779
   - K. Sedighiani et al.,
     Mechanics of Materials, submitted
 output: [rho_dip, rho_mob]

examples/config/phase/mechanical/plastic/isotropic_free-surface.yaml

@@ -1,8 +1,8 @@
 type: isotropic
 references:
   - T. Maiti and P. Eisenlohr,
-    Scripta Materialia 145/37-40, 2018,
+    Scripta Materialia 145:37-40, 2018,
-    10.1016/j.scriptamat.2017.09.047
+    https://doi.org/10.1016/j.scriptamat.2017.09.047
 output: [xi]
 dot_gamma_0: 0.001
 n: 20.

examples/config/phase/mechanical/plastic/nonlocal_Al.yaml

@@ -2,7 +2,8 @@ type: nonlocal
 references:
   C. Kords,
   On the role of dislocation transport in the constitutive description of crystal plasticity,
-  RWTH Aachen 2013
+  RWTH Aachen 2013,
+  http://publications.rwth-aachen.de/record/229993/files/4862.pdf
 output: [rho_u_ed_pos, rho_b_ed_pos, rho_u_ed_neg, rho_b_ed_neg, rho_u_sc_pos, rho_b_sc_pos, rho_u_sc_neg, rho_b_sc_neg, rho_d_ed, rho_d_sc]
 N_sl: [12]
 

examples/config/phase/mechanical/plastic/nonlocal_Ni.yaml

@@ -2,7 +2,8 @@ type: nonlocal
 references:
   C. Kords,
   On the role of dislocation transport in the constitutive description of crystal plasticity,
-  RWTH Aachen 2013
+  RWTH Aachen 2013,
+  http://publications.rwth-aachen.de/record/229993/files/4862.pdf
 output: [rho_u_ed_pos, rho_b_ed_pos, rho_u_ed_neg, rho_b_ed_neg, rho_u_sc_pos, rho_b_sc_pos, rho_u_sc_neg, rho_b_sc_neg, rho_d_ed, rho_d_sc]
 N_sl: [12]
 

examples/config/phase/mechanical/plastic/phenopowerlaw_Al.yaml

@@ -1,8 +1,8 @@
 type: phenopowerlaw
 references:
   - W.F. Hosford et al.,
-    Acta Metallurgica 8(3)/187-199, 1960,
+    Acta Metallurgica 8(3):187-199, 1960,
-    10.1016/0001-6160(60)90127-9,
+    https://doi.org/10.1016/0001-6160(60)90127-9,
     fitted from Fig. 5
 output: [xi_sl, gamma_sl]
 N_sl: [12]

examples/config/phase/mechanical/plastic/phenopowerlaw_Au.yaml

@@ -1,11 +1,11 @@
 type: phenopowerlaw
 references:
   - D. Ma et al.,
-    Acta Materialia 103/796-808, 2016,
+    Acta Materialia 103:796-808, 2016,
-    10.1016/j.actamat.2015.11.016
+    https://doi.org/10.1016/j.actamat.2015.11.016
   - I. Kovács and G.Vörös,
-    International Journal of Plasticity 12/35-43, 1996,
+    International Journal of Plasticity 12:35-43, 1996,
-    10.1016/S0749-6419(95)00043-7
+    https://doi.org/10.1016/S0749-6419(95)00043-7
 output: [xi_sl, gamma_sl]
 N_sl: [12]
 n_sl: 83.3

examples/config/phase/mechanical/plastic/phenopowerlaw_Cu.yaml

@@ -1,8 +1,8 @@
 type: phenopowerlaw
 references:
   - T Takeuchi,
-    Transactions of the Japan Institute of Metals 16(10)/629-640, 1975,
+    Transactions of the Japan Institute of Metals 16(10):629-640, 1975,
-    10.2320/matertrans1960.16.629,
+    https://doi.org/10.2320/matertrans1960.16.629,
     fitted from Fig. 3b
 output: [xi_sl, gamma_sl]
 N_sl: [12]

examples/config/phase/mechanical/plastic/phenopowerlaw_DP-steel-ferrite.yaml

@@ -1,8 +1,8 @@
 type: phenopowerlaw
 references:
   - C.C. Tasan et al.,
-    Acta Materialia 81/386-400, 2014,
+    Acta Materialia 81:386-400, 2014,
-    10.1016/j.actamat.2014.07.071
+    https://doi.org/10.1016/j.actamat.2014.07.071
 output: [xi_sl, gamma_sl]
 N_sl: [12, 12]
 n_sl: 20

examples/config/phase/mechanical/plastic/phenopowerlaw_Ti.yaml

@@ -1,11 +1,11 @@
 type: phenopowerlaw
 references:
   - C. Zambaldi et al.,
-    Journal of Materials Research 27(1)/356-367, 2021,
+    Journal of Materials Research 27(1):356-367, 2021,
-    10.1557/jmr.2011.334
+    https://doi.org/10.1557/jmr.2011.334
   - L. Wang et al.,
-    Acta Materialia 132/598-610, 2017,
+    Acta Materialia 132:598-610, 2017,
-    10.1016/j.actamat.2017.05.015
+    https://doi.org/10.1016/j.actamat.2017.05.015
 output: [gamma_sl]
 N_sl: [3, 3, 0, 0, 12]
 n_sl: 20

examples/config/phase/thermal/Al.yaml

@@ -1,5 +1,5 @@
 references:
-  - www.engineeringtoolbox.com/thermal-conductivity-metals-d_858.html
+  - https://www.engineeringtoolbox.com/thermal-conductivity-metals-d_858.html
-  - www.engineeringtoolbox.com/specific-heat-metals-d_152.html
+  - https://www.engineeringtoolbox.com/specific-heat-metals-d_152.html
 C_p: 910.0
 K_11: 236.0

examples/config/phase/thermal/Au.yaml

@@ -1,4 +1,4 @@
 references:
-  - de.wikipedia.org/wiki/Gold
+  - https://de.wikipedia.org/wiki/Gold
 C_p: 128.0
 K_11: 320.0

examples/config/phase/thermal/Cu.yaml

@@ -1,4 +1,4 @@
 references:
-  - www.mit.edu/~6.777/matprops/copper.htm
+  - https://www.mit.edu/~6.777/matprops/copper.htm
 C_p: 385.0
 K_11: 401.0

examples/config/phase/thermal/Steel-0.5C.yaml

@@ -1,5 +1,5 @@
 references:
-  - www.engineeringtoolbox.com/thermal-conductivity-metals-d_858.html
+  - https://www.engineeringtoolbox.com/thermal-conductivity-metals-d_858.html
-  - www.engineeringtoolbox.com/specific-heat-metals-d_152.html
+  - https://www.engineeringtoolbox.com/specific-heat-metals-d_152.html
 C_p: 490.0
 K_11: 54.0

examples/config/phase/thermal/W.yaml

@@ -1,4 +1,4 @@
 references:
-  - www.mit.edu/~6.777/matprops/tungsten.htm
+  - https://www.mit.edu/~6.777/matprops/tungsten.htm
 C_p: 132.51
 K_11: 178.0