223031012
/
DAMASK_EICMD
mirror of https://github.com/achalhp/DAMASK_EICMD.git
1
0
Fork 0
Code Issues Projects Releases Wiki Activity

handling prospector complaints

This commit is contained in:
Martin Diehl 2019-09-13 16:06:47 -07:00
parent 002383afc2
commit c5006e264b
1 changed files with 12 additions and 15 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

27
python/damask/dadf5.py
View File

@ -15,10 +15,7 @@ class DADF5():
""" """
# ------------------------------------------------------------------ # ------------------------------------------------------------------
def __init__(self, def __init__(self,filename):
filename,
mode = 'a',
):
""" """
Opens an existing DADF5 file. Opens an existing DADF5 file.
@ -28,7 +25,6 @@ class DADF5():
name of the DADF5 file to be openend. name of the DADF5 file to be openend.
""" """
with h5py.File(filename,'r') as f: with h5py.File(filename,'r') as f:
if f.attrs['DADF5-major'] != 0 or f.attrs['DADF5-minor'] != 2: if f.attrs['DADF5-major'] != 0 or f.attrs['DADF5-minor'] != 2:
@ -63,7 +59,7 @@ class DADF5():
self.m_output_types = list(set(self.m_output_types)) # make unique self.m_output_types = list(set(self.m_output_types)) # make unique
#self.on_air #self.on_air
self.active= {'increments': self.increments, # ToDo:simplify, activity only positions that translate into (no complex types) self.active= {'increments': self.increments, # ToDo:simplify, activity only positions that translate into (no complex types)
'constituents': self.constituents, 'constituents': self.constituents,
'materialpoints': self.materialpoints, 'materialpoints': self.materialpoints,
'constituent': range(self.Nconstituents), # ToDo: stupid naming 'constituent': range(self.Nconstituents), # ToDo: stupid naming
@ -73,8 +69,6 @@ class DADF5():
# ToDo: store increments, select icrements (trivial), position, and time # ToDo: store increments, select icrements (trivial), position, and time
self.filename = filename self.filename = filename
self.mode = mode
def get_groups(self,l): #group_with_data(datasets) def get_groups(self,l): #group_with_data(datasets)
""" """
@ -96,9 +90,7 @@ class DADF5():
def get_active_groups(self): # rename: get_groups needed? merge with datasets and have [] and ['*'] def get_active_groups(self): # rename: get_groups needed? merge with datasets and have [] and ['*']
""" """Get groups that are currently considered for evaluation."""
Get groups that are currently considered for evaluation.
"""
groups = [] groups = []
for i in self.active['increments']: for i in self.active['increments']:
group_inc = 'inc{:05}'.format(i['inc']) #ToDo: Merge path only once at the end '/'.join(listE) group_inc = 'inc{:05}'.format(i['inc']) #ToDo: Merge path only once at the end '/'.join(listE)
@ -258,6 +250,7 @@ class DADF5():
def add_norm(self,x,ord=None): def add_norm(self,x,ord=None):
""" """
Adds norm of vector or tensor or magnitude of a scalar. Adds norm of vector or tensor or magnitude of a scalar.
See numpy.linalg.norm manual for details. See numpy.linalg.norm manual for details.
""" """
def norm(x,ord): def norm(x,ord):
@ -385,12 +378,16 @@ class DADF5():
def __add_generic_pointwise(self,func,datasets_requested,extra_args={}): def __add_generic_pointwise(self,func,datasets_requested,extra_args={}):
""" """
General function to add pointwise data. General function to add pointwise data.
"""
Parameters
----------
func : function
datasets_requested : list of dictionaries
extra_args : dictitionary
"""
def job(args): def job(args):
""" """Call function with input data + extra arguments, returns results + group."""
Call function with input data + extra arguments, returns results + group.
"""
args['results'].put({**args['func'](**args['in']),'group':args['group']}) args['results'].put({**args['func'](**args['in']),'group':args['group']})