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DAMASK_EICMD
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added awareness for Laguerre weights

This commit is contained in:
Philip Eisenlohr 2016-04-24 11:22:54 -05:00
parent ea24becdd4
commit c37c0a8ed9
1 changed files with 32 additions and 20 deletions
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42
processing/pre/seeds_fromTable.py
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@ -23,29 +23,38 @@ Examples:
""", version = scriptID)
parser.add_option('-p', '--positions',
parser.add_option('-p',
'--pos', '--seedposition',
dest = 'pos',
type = 'string', metavar = 'string',
help = 'coordinate label [%default]')
help = 'label of coordinates [%default]')
parser.add_option('--boundingbox',
dest = 'box',
type = 'float', nargs = 6, metavar = ' '.join(['float']*6),
help = 'min (x,y,z) and max (x,y,z) coordinates of bounding box [tight]')
parser.add_option('-i', '--index',
dest = 'index',
parser.add_option('-m',
'--microstructure',
dest = 'microstructure',
type = 'string', metavar = 'string',
help = 'microstructure index label [%default]')
parser.add_option('-w','--white',
help = 'label of microstructures [%default]')
parser.add_option('--weight',
dest = 'weight',
type = 'string', metavar = 'string',
help = 'label of weights [%default]')
parser.add_option('-w',
'--white',
dest = 'whitelist',
action = 'extend', metavar = '<int LIST>',
help = 'whitelist of microstructure indices')
parser.add_option('-b','--black',
parser.add_option('-b',
'--black',
dest = 'blacklist',
action = 'extend', metavar = '<int LIST>',
help = 'blacklist of microstructure indices')
parser.set_defaults(pos = 'pos',
index ='microstructure',
microstructure = 'microstructure',
weight = None,
)
(options,filenames) = parser.parse_args()
@ -58,8 +67,7 @@ if options.blacklist is not None: options.blacklist = map(int,options.blacklist)
if filenames == []: filenames = [None]
for name in filenames:
try:
table = damask.ASCIItable(name = name,
try: table = damask.ASCIItable(name = name,
outname = os.path.splitext(name)[0]+'.seeds' if name else name,
buffered = False)
except: continue
@ -69,14 +77,17 @@ for name in filenames:
# ------------------------------------------ sanity checks ---------------------------------------
missing_labels = table.data_readArray([options.pos,options.index])
missing_labels = table.data_readArray([options.pos,options.microstructure] +
([options.weight] if options.weight else []))
errors = []
if len(missing_labels) > 0:
errors.append('column{} {} not found'.format('s' if len(missing_labels) > 1 else '',
', '.join(missing_labels)))
for label, dim in {options.pos: 3,
options.index: 1}.iteritems():
input = {options.pos: 3,
options.microstructure: 1,}
if options.weight: input.update({options.weight: 1})
for label, dim in input.iteritems():
if table.label_dimension(label) != dim:
errors.append('column {} has wrong dimension'.format(label))
@ -113,11 +124,12 @@ for name in filenames:
table.info = [
scriptID,
'size %s'%(' '.join(list(itertools.chain.from_iterable(zip(['x','y','z'],
'size {}'.format(' '.join(list(itertools.chain.from_iterable(zip(['x','y','z'],
map(str,boundingBox[1,:]-boundingBox[0,:])))))),
]
table.labels_clear()
table.labels_append(['1_pos','2_pos','3_pos','microstructure']) # implicitly switching label processing/writing on
table.labels_append(['1_pos','2_pos','3_pos','microstructure'] +
['weight'] if options.weight else []) # implicitly switching label processing/writing on
table.head_write()
# ------------------------------------------ output result ---------------------------------------