cleaning
This commit is contained in:
Martin Diehl
parent
95d93ce58c
commit
c045bd6355
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@ -6,95 +6,104 @@
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!> @brief Sets up the mesh for the solvers MSC.Marc, Abaqus and the spectral solver
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!--------------------------------------------------------------------------------------------------
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module mesh
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use, intrinsic :: iso_c_binding
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use prec
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use geometry_plastic_nonlocal
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use mesh_base
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implicit none
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private
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integer, public, protected :: &
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mesh_Nnodes
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integer, dimension(:), allocatable, private :: &
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microGlobal
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integer, dimension(:), allocatable, private :: &
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mesh_homogenizationAt
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integer, dimension(:,:), allocatable, public, protected :: &
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mesh_element !< entryCount and list of elements containing node
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integer, dimension(:,:,:,:), allocatable, public, protected :: &
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mesh_ipNeighborhood !< 6 or less neighboring IPs as [element_num, IP_index, neighbor_index that points to me]
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real(pReal), public, protected :: &
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mesh_unitlength !< physical length of one unit in mesh
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real(pReal), dimension(:,:), allocatable, private :: &
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mesh_node !< node x,y,z coordinates (after deformation! ONLY FOR MARC!!!)
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use, intrinsic :: iso_c_binding
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use prec
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use geometry_plastic_nonlocal
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use mesh_base
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#include <petsc/finclude/petscsys.h>
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use PETScsys
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use DAMASK_interface
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use IO
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use debug
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use numerics
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use FEsolving
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real(pReal), dimension(:,:), allocatable, public, protected :: &
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mesh_ipVolume, & !< volume associated with IP (initially!)
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mesh_node0 !< node x,y,z coordinates (initially!)
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implicit none
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private
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real(pReal), dimension(:,:,:), allocatable, public, protected :: &
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mesh_ipArea !< area of interface to neighboring IP (initially!)
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include 'fftw3-mpi.f03'
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integer, public, protected :: &
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mesh_Nnodes
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real(pReal), dimension(:,:,:), allocatable, public :: &
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mesh_ipCoordinates !< IP x,y,z coordinates (after deformation!)
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integer, dimension(:), allocatable, private :: &
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microGlobal
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integer, dimension(:), allocatable, private :: &
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mesh_homogenizationAt
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real(pReal),dimension(:,:,:,:), allocatable, public, protected :: &
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mesh_ipAreaNormal !< area normal of interface to neighboring IP (initially!)
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integer, dimension(:,:), allocatable, public, protected :: &
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mesh_element !< entryCount and list of elements containing node
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logical, dimension(3), public, parameter :: mesh_periodicSurface = .true. !< flag indicating periodic outer surfaces (used for fluxes)
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integer, dimension(:,:,:,:), allocatable, public, protected :: &
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mesh_ipNeighborhood !< 6 or less neighboring IPs as [element_num, IP_index, neighbor_index that points to me]
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real(pReal), public, protected :: &
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mesh_unitlength !< physical length of one unit in mesh
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real(pReal), dimension(:,:), allocatable, private :: &
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mesh_node !< node x,y,z coordinates (after deformation! ONLY FOR MARC!!!)
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! grid specific
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integer, dimension(3), public, protected :: &
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grid !< (global) grid
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integer, public, protected :: &
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mesh_NcpElemsGlobal, & !< total number of CP elements in global mesh
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grid3, & !< (local) grid in 3rd direction
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grid3Offset !< (local) grid offset in 3rd direction
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real(pReal), dimension(3), public, protected :: &
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geomSize
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real(pReal), public, protected :: &
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size3, & !< (local) size in 3rd direction
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size3offset !< (local) size offset in 3rd direction
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real(pReal), dimension(:,:), allocatable, public, protected :: &
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mesh_ipVolume, & !< volume associated with IP (initially!)
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mesh_node0 !< node x,y,z coordinates (initially!)
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public :: &
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mesh_init
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real(pReal), dimension(:,:,:), allocatable, public, protected :: &
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mesh_ipArea !< area of interface to neighboring IP (initially!)
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private :: &
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mesh_build_ipAreas, &
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mesh_build_ipNormals, &
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mesh_spectral_build_nodes, &
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mesh_spectral_build_elements, &
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mesh_spectral_build_ipNeighborhood, &
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mesh_build_ipCoordinates
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real(pReal), dimension(:,:,:), allocatable, public :: &
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mesh_ipCoordinates !< IP x,y,z coordinates (after deformation!)
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type, public, extends(tMesh) :: tMesh_grid
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real(pReal),dimension(:,:,:,:), allocatable, public, protected :: &
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mesh_ipAreaNormal !< area normal of interface to neighboring IP (initially!)
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integer, dimension(3), public :: &
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grid !< (global) grid
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integer, public :: &
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mesh_NcpElemsGlobal, & !< total number of CP elements in global mesh
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grid3, & !< (local) grid in 3rd direction
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grid3Offset !< (local) grid offset in 3rd direction
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real(pReal), dimension(3), public :: &
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geomSize
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real(pReal), public :: &
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size3, & !< (local) size in 3rd direction
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size3offset
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logical, dimension(3), public, parameter :: mesh_periodicSurface = .true. !< flag indicating periodic outer surfaces (used for fluxes)
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contains
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procedure, pass(self) :: tMesh_grid_init
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generic, public :: init => tMesh_grid_init
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end type tMesh_grid
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type(tMesh_grid), public, protected :: theMesh
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! grid specific
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integer, dimension(3), public, protected :: &
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grid !< (global) grid
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integer, public, protected :: &
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mesh_NcpElemsGlobal, & !< total number of CP elements in global mesh
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grid3, & !< (local) grid in 3rd direction
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grid3Offset !< (local) grid offset in 3rd direction
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real(pReal), dimension(3), public, protected :: &
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geomSize
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real(pReal), public, protected :: &
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size3, & !< (local) size in 3rd direction
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size3offset !< (local) size offset in 3rd direction
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public :: &
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mesh_init
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private :: &
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mesh_build_ipAreas, &
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mesh_build_ipNormals, &
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mesh_spectral_build_nodes, &
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mesh_spectral_build_elements, &
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mesh_spectral_build_ipNeighborhood, &
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mesh_build_ipCoordinates
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type, public, extends(tMesh) :: tMesh_grid
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integer, dimension(3), public :: &
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grid !< (global) grid
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integer, public :: &
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mesh_NcpElemsGlobal, & !< total number of CP elements in global mesh
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grid3, & !< (local) grid in 3rd direction
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grid3Offset !< (local) grid offset in 3rd direction
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real(pReal), dimension(3), public :: &
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geomSize
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real(pReal), public :: &
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size3, & !< (local) size in 3rd direction
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size3offset
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contains
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procedure, pass(self) :: tMesh_grid_init
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generic, public :: init => tMesh_grid_init
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end type tMesh_grid
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type(tMesh_grid), public, protected :: theMesh
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contains
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@ -103,7 +112,7 @@ subroutine tMesh_grid_init(self,nodes)
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class(tMesh_grid) :: self
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real(pReal), dimension(:,:), intent(in) :: nodes
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call self%tMesh%init('grid',10_pInt,nodes)
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call self%tMesh%init('grid',10,nodes)
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end subroutine tMesh_grid_init
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@ -113,101 +122,82 @@ end subroutine tMesh_grid_init
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!--------------------------------------------------------------------------------------------------
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subroutine mesh_init(ip,el)
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#include <petsc/finclude/petscsys.h>
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use PETScsys
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integer(C_INTPTR_T) :: devNull, local_K, local_K_offset
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integer :: ierr, worldsize, j
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integer, intent(in), optional :: el, ip
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logical :: myDebug
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use DAMASK_interface
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use IO, only: &
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IO_error
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use debug, only: &
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debug_e, &
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debug_i, &
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debug_level, &
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debug_mesh, &
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debug_levelBasic
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use numerics, only: &
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numerics_unitlength
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use FEsolving, only: &
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FEsolving_execElem, &
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FEsolving_execIP
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write(6,'(/,a)') ' <<<+- mesh init -+>>>'
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include 'fftw3-mpi.f03'
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integer(C_INTPTR_T) :: devNull, local_K, local_K_offset
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integer :: ierr, worldsize, j
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integer, intent(in), optional :: el, ip
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logical :: myDebug
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mesh_unitlength = numerics_unitlength ! set physical extent of a length unit in mesh
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write(6,'(/,a)') ' <<<+- mesh init -+>>>'
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myDebug = (iand(debug_level(debug_mesh),debug_levelBasic) /= 0)
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mesh_unitlength = numerics_unitlength ! set physical extent of a length unit in mesh
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myDebug = (iand(debug_level(debug_mesh),debug_levelBasic) /= 0_pInt)
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call fftw_mpi_init()
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call mesh_spectral_read_grid()
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call fftw_mpi_init()
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call mesh_spectral_read_grid()
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call MPI_comm_size(PETSC_COMM_WORLD, worldsize, ierr)
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if(ierr /=0_pInt) call IO_error(894_pInt, ext_msg='MPI_comm_size')
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if(worldsize>grid(3)) call IO_error(894_pInt, ext_msg='number of processes exceeds grid(3)')
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call MPI_comm_size(PETSC_COMM_WORLD, worldsize, ierr)
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if(ierr /=0) call IO_error(894, ext_msg='MPI_comm_size')
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if(worldsize>grid(3)) call IO_error(894, ext_msg='number of processes exceeds grid(3)')
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devNull = fftw_mpi_local_size_3d(int(grid(3),C_INTPTR_T), &
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int(grid(2),C_INTPTR_T), &
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int(grid(1),C_INTPTR_T)/2+1, &
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PETSC_COMM_WORLD, &
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local_K, & ! domain grid size along z
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local_K_offset) ! domain grid offset along z
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grid3 = int(local_K,pInt)
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grid3Offset = int(local_K_offset,pInt)
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size3 = geomSize(3)*real(grid3,pReal) /real(grid(3),pReal)
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size3Offset = geomSize(3)*real(grid3Offset,pReal)/real(grid(3),pReal)
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devNull = fftw_mpi_local_size_3d(int(grid(3),C_INTPTR_T), &
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int(grid(2),C_INTPTR_T), &
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int(grid(1),C_INTPTR_T)/2+1, &
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PETSC_COMM_WORLD, &
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local_K, & ! domain grid size along z
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local_K_offset) ! domain grid offset along z
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grid3 = int(local_K,pInt)
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grid3Offset = int(local_K_offset,pInt)
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size3 = geomSize(3)*real(grid3,pReal) /real(grid(3),pReal)
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size3Offset = geomSize(3)*real(grid3Offset,pReal)/real(grid(3),pReal)
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mesh_NcpElemsGlobal = product(grid)
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mesh_NcpElemsGlobal = product(grid)
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mesh_Nnodes = product(grid(1:2) + 1_pInt)*(grid3 + 1_pInt)
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mesh_Nnodes = product(grid(1:2) + 1)*(grid3 + 1)
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mesh_node0 = mesh_spectral_build_nodes()
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mesh_node = mesh_node0
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if (myDebug) write(6,'(a)') ' Built nodes'; flush(6)
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mesh_node0 = mesh_spectral_build_nodes()
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mesh_node = mesh_node0
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if (myDebug) write(6,'(a)') ' Built nodes'; flush(6)
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call theMesh%init(mesh_node)
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call theMesh%setNelems(product(grid(1:2))*grid3)
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call mesh_spectral_build_elements()
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mesh_homogenizationAt = mesh_homogenizationAt(product(grid(1:2))*grid3Offset+1: &
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product(grid(1:2))*(grid3Offset+grid3)) ! reallocate/shrink in case of MPI
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call theMesh%init(mesh_node)
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call theMesh%setNelems(product(grid(1:2))*grid3)
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call mesh_spectral_build_elements()
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mesh_homogenizationAt = mesh_homogenizationAt(product(grid(1:2))*grid3Offset+1: &
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product(grid(1:2))*(grid3Offset+grid3)) ! reallocate/shrink in case of MPI
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if (myDebug) write(6,'(a)') ' Built elements'; flush(6)
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if (myDebug) write(6,'(a)') ' Built elements'; flush(6)
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if (myDebug) write(6,'(a)') ' Built cell nodes'; flush(6)
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mesh_ipCoordinates = mesh_build_ipCoordinates()
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if (myDebug) write(6,'(a)') ' Built IP coordinates'; flush(6)
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allocate(mesh_ipVolume(1,theMesh%nElems),source=product([geomSize(1:2),size3]/real([grid(1:2),grid3])))
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if (myDebug) write(6,'(a)') ' Built IP volumes'; flush(6)
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mesh_ipArea = mesh_build_ipAreas()
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mesh_ipAreaNormal = mesh_build_ipNormals()
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if (myDebug) write(6,'(a)') ' Built IP areas'; flush(6)
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if (myDebug) write(6,'(a)') ' Built cell nodes'; flush(6)
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mesh_ipCoordinates = mesh_build_ipCoordinates()
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if (myDebug) write(6,'(a)') ' Built IP coordinates'; flush(6)
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allocate(mesh_ipVolume(1,theMesh%nElems),source=product([geomSize(1:2),size3]/real([grid(1:2),grid3])))
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if (myDebug) write(6,'(a)') ' Built IP volumes'; flush(6)
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mesh_ipArea = mesh_build_ipAreas()
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mesh_ipAreaNormal = mesh_build_ipNormals()
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if (myDebug) write(6,'(a)') ' Built IP areas'; flush(6)
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call mesh_spectral_build_ipNeighborhood
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call geometry_plastic_nonlocal_set_IPneighborhood(mesh_ipNeighborhood)
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call mesh_spectral_build_ipNeighborhood
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call geometry_plastic_nonlocal_set_IPneighborhood(mesh_ipNeighborhood)
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if (myDebug) write(6,'(a)') ' Built IP neighborhood'; flush(6)
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if (myDebug) write(6,'(a)') ' Built IP neighborhood'; flush(6)
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if (debug_e < 1 .or. debug_e > theMesh%nElems) &
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call IO_error(602_pInt,ext_msg='element') ! selected element does not exist
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if (debug_i < 1 .or. debug_i > theMesh%elem%nIPs) &
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call IO_error(602_pInt,ext_msg='IP') ! selected element does not have requested IP
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if (debug_e < 1 .or. debug_e > theMesh%nElems) &
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call IO_error(602,ext_msg='element') ! selected element does not exist
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if (debug_i < 1 .or. debug_i > theMesh%elem%nIPs) &
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call IO_error(602,ext_msg='IP') ! selected element does not have requested IP
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FEsolving_execElem = [ 1_pInt,theMesh%nElems ] ! parallel loop bounds set to comprise all DAMASK elements
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allocate(FEsolving_execIP(2_pInt,theMesh%nElems), source=1_pInt) ! parallel loop bounds set to comprise from first IP...
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forall (j = 1_pInt:theMesh%nElems) FEsolving_execIP(2,j) = theMesh%elem%nIPs ! ...up to own IP count for each element
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FEsolving_execElem = [ 1,theMesh%nElems ] ! parallel loop bounds set to comprise all DAMASK elements
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allocate(FEsolving_execIP(2,theMesh%nElems), source=1) ! parallel loop bounds set to comprise from first IP...
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forall (j = 1:theMesh%nElems) FEsolving_execIP(2,j) = theMesh%elem%nIPs ! ...up to own IP count for each element
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!!!! COMPATIBILITY HACK !!!!
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theMesh%homogenizationAt = mesh_element(3,:)
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theMesh%microstructureAt = mesh_element(4,:)
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theMesh%homogenizationAt = mesh_element(3,:)
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theMesh%microstructureAt = mesh_element(4,:)
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!!!!!!!!!!!!!!!!!!!!!!!!
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end subroutine mesh_init
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@ -219,22 +209,13 @@ end subroutine mesh_init
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! supposed to be called only once!
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!--------------------------------------------------------------------------------------------------
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subroutine mesh_spectral_read_grid()
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use IO, only: &
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IO_stringPos, &
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IO_lc, &
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IO_stringValue, &
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IO_intValue, &
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IO_floatValue, &
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IO_error
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use DAMASK_interface, only: &
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geometryFile
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character(len=:), allocatable :: rawData
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character(len=65536) :: line
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integer, allocatable, dimension(:) :: chunkPos
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integer :: h =- 1_pInt
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integer :: h =- 1
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integer :: &
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headerLength = -1_pInt, & !< length of header (in lines)
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headerLength = -1, & !< length of header (in lines)
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fileLength, & !< length of the geom file (in characters)
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fileUnit, &
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startPos, endPos, &
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@ -245,7 +226,7 @@ subroutine mesh_spectral_read_grid()
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e, & !< "element", i.e. spectral collocation point
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i, j
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grid = -1_pInt
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grid = -1
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geomSize = -1.0_pReal
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!--------------------------------------------------------------------------------------------------
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@ -253,7 +234,7 @@ subroutine mesh_spectral_read_grid()
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inquire(file = trim(geometryFile), size=fileLength)
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open(newunit=fileUnit, file=trim(geometryFile), access='stream',&
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status='old', position='rewind', action='read',iostat=myStat)
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if(myStat /= 0_pInt) call IO_error(100_pInt,ext_msg=trim(geometryFile))
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if(myStat /= 0) call IO_error(100,ext_msg=trim(geometryFile))
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allocate(character(len=fileLength)::rawData)
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read(fileUnit) rawData
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close(fileUnit)
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@ -263,106 +244,106 @@ subroutine mesh_spectral_read_grid()
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endPos = index(rawData,new_line(''))
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if(endPos <= index(rawData,'head')) then
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startPos = len(rawData)
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call IO_error(error_ID=841_pInt, ext_msg='mesh_spectral_read_grid')
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call IO_error(error_ID=841, ext_msg='mesh_spectral_read_grid')
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else
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chunkPos = IO_stringPos(rawData(1:endPos))
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if (chunkPos(1) < 2_pInt) call IO_error(error_ID=841_pInt, ext_msg='mesh_spectral_read_grid')
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headerLength = IO_intValue(rawData(1:endPos),chunkPos,1_pInt)
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startPos = endPos + 1_pInt
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if (chunkPos(1) < 2) call IO_error(error_ID=841, ext_msg='mesh_spectral_read_grid')
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headerLength = IO_intValue(rawData(1:endPos),chunkPos,1)
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startPos = endPos + 1
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endif
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||||
!--------------------------------------------------------------------------------------------------
|
||||
! read and interprete header
|
||||
l = 0
|
||||
do while (l < headerLength .and. startPos < len(rawData))
|
||||
endPos = startPos + index(rawData(startPos:),new_line('')) - 1_pInt
|
||||
endPos = startPos + index(rawData(startPos:),new_line('')) - 1
|
||||
if (endPos < startPos) endPos = len(rawData) ! end of file without new line
|
||||
line = rawData(startPos:endPos)
|
||||
startPos = endPos + 1_pInt
|
||||
l = l + 1_pInt
|
||||
startPos = endPos + 1
|
||||
l = l + 1
|
||||
|
||||
chunkPos = IO_stringPos(trim(line))
|
||||
if (chunkPos(1) < 2) cycle ! need at least one keyword value pair
|
||||
|
||||
select case ( IO_lc(IO_StringValue(trim(line),chunkPos,1_pInt,.true.)) )
|
||||
select case ( IO_lc(IO_StringValue(trim(line),chunkPos,1,.true.)) )
|
||||
case ('grid')
|
||||
if (chunkPos(1) > 6) then
|
||||
do j = 2_pInt,6_pInt,2_pInt
|
||||
do j = 2,6,2
|
||||
select case (IO_lc(IO_stringValue(line,chunkPos,j)))
|
||||
case('a')
|
||||
grid(1) = IO_intValue(line,chunkPos,j+1_pInt)
|
||||
grid(1) = IO_intValue(line,chunkPos,j+1)
|
||||
case('b')
|
||||
grid(2) = IO_intValue(line,chunkPos,j+1_pInt)
|
||||
grid(2) = IO_intValue(line,chunkPos,j+1)
|
||||
case('c')
|
||||
grid(3) = IO_intValue(line,chunkPos,j+1_pInt)
|
||||
grid(3) = IO_intValue(line,chunkPos,j+1)
|
||||
end select
|
||||
enddo
|
||||
endif
|
||||
|
||||
case ('size')
|
||||
if (chunkPos(1) > 6) then
|
||||
do j = 2_pInt,6_pInt,2_pInt
|
||||
do j = 2,6,2
|
||||
select case (IO_lc(IO_stringValue(line,chunkPos,j)))
|
||||
case('x')
|
||||
geomSize(1) = IO_floatValue(line,chunkPos,j+1_pInt)
|
||||
geomSize(1) = IO_floatValue(line,chunkPos,j+1)
|
||||
case('y')
|
||||
geomSize(2) = IO_floatValue(line,chunkPos,j+1_pInt)
|
||||
geomSize(2) = IO_floatValue(line,chunkPos,j+1)
|
||||
case('z')
|
||||
geomSize(3) = IO_floatValue(line,chunkPos,j+1_pInt)
|
||||
geomSize(3) = IO_floatValue(line,chunkPos,j+1)
|
||||
end select
|
||||
enddo
|
||||
endif
|
||||
|
||||
case ('homogenization')
|
||||
if (chunkPos(1) > 1) h = IO_intValue(line,chunkPos,2_pInt)
|
||||
if (chunkPos(1) > 1) h = IO_intValue(line,chunkPos,2)
|
||||
end select
|
||||
|
||||
enddo
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
! sanity checks
|
||||
if(h < 1_pInt) &
|
||||
call IO_error(error_ID = 842_pInt, ext_msg='homogenization (mesh_spectral_read_grid)')
|
||||
if(any(grid < 1_pInt)) &
|
||||
call IO_error(error_ID = 842_pInt, ext_msg='grid (mesh_spectral_read_grid)')
|
||||
if(h < 1) &
|
||||
call IO_error(error_ID = 842, ext_msg='homogenization (mesh_spectral_read_grid)')
|
||||
if(any(grid < 1)) &
|
||||
call IO_error(error_ID = 842, ext_msg='grid (mesh_spectral_read_grid)')
|
||||
if(any(geomSize < 0.0_pReal)) &
|
||||
call IO_error(error_ID = 842_pInt, ext_msg='size (mesh_spectral_read_grid)')
|
||||
call IO_error(error_ID = 842, ext_msg='size (mesh_spectral_read_grid)')
|
||||
|
||||
allocate(microGlobal(product(grid)), source = -1_pInt)
|
||||
allocate(microGlobal(product(grid)), source = -1)
|
||||
allocate(mesh_homogenizationAt(product(grid)), source = h) ! too large in case of MPI (shrink later, not very elegant)
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
! read and interpret content
|
||||
e = 1_pInt
|
||||
e = 1
|
||||
do while (startPos < len(rawData))
|
||||
endPos = startPos + index(rawData(startPos:),new_line('')) - 1_pInt
|
||||
endPos = startPos + index(rawData(startPos:),new_line('')) - 1
|
||||
if (endPos < startPos) endPos = len(rawData) ! end of file without new line
|
||||
line = rawData(startPos:endPos)
|
||||
startPos = endPos + 1_pInt
|
||||
l = l + 1_pInt
|
||||
startPos = endPos + 1
|
||||
l = l + 1
|
||||
chunkPos = IO_stringPos(trim(line))
|
||||
|
||||
noCompression: if (chunkPos(1) /= 3) then
|
||||
c = chunkPos(1)
|
||||
microGlobal(e:e+c-1_pInt) = [(IO_intValue(line,chunkPos,i+1_pInt), i=0_pInt, c-1_pInt)]
|
||||
microGlobal(e:e+c-1) = [(IO_intValue(line,chunkPos,i+1), i=0, c-1)]
|
||||
else noCompression
|
||||
compression: if (IO_lc(IO_stringValue(line,chunkPos,2)) == 'of') then
|
||||
c = IO_intValue(line,chunkPos,1)
|
||||
microGlobal(e:e+c-1_pInt) = [(IO_intValue(line,chunkPos,3),i = 1_pInt,IO_intValue(line,chunkPos,1))]
|
||||
microGlobal(e:e+c-1) = [(IO_intValue(line,chunkPos,3),i = 1,IO_intValue(line,chunkPos,1))]
|
||||
else if (IO_lc(IO_stringValue(line,chunkPos,2)) == 'to') then compression
|
||||
c = abs(IO_intValue(line,chunkPos,3) - IO_intValue(line,chunkPos,1)) + 1_pInt
|
||||
o = merge(+1_pInt, -1_pInt, IO_intValue(line,chunkPos,3) > IO_intValue(line,chunkPos,1))
|
||||
microGlobal(e:e+c-1_pInt) = [(i, i = IO_intValue(line,chunkPos,1),IO_intValue(line,chunkPos,3),o)]
|
||||
c = abs(IO_intValue(line,chunkPos,3) - IO_intValue(line,chunkPos,1)) + 1
|
||||
o = merge(+1, -1, IO_intValue(line,chunkPos,3) > IO_intValue(line,chunkPos,1))
|
||||
microGlobal(e:e+c-1) = [(i, i = IO_intValue(line,chunkPos,1),IO_intValue(line,chunkPos,3),o)]
|
||||
else compression
|
||||
c = chunkPos(1)
|
||||
microGlobal(e:e+c-1_pInt) = [(IO_intValue(line,chunkPos,i+1_pInt), i=0_pInt, c-1_pInt)]
|
||||
microGlobal(e:e+c-1) = [(IO_intValue(line,chunkPos,i+1), i=0, c-1)]
|
||||
endif compression
|
||||
endif noCompression
|
||||
|
||||
e = e+c
|
||||
end do
|
||||
|
||||
if (e-1 /= product(grid)) call IO_error(error_ID = 843_pInt, el=e)
|
||||
if (e-1 /= product(grid)) call IO_error(error_ID = 843, el=e)
|
||||
|
||||
end subroutine mesh_spectral_read_grid
|
||||
|
||||
|
|
@ -413,30 +394,30 @@ end function mesh_build_ipCoordinates
|
|||
!> @brief Store FEid, type, material, texture, and node list per element.
|
||||
!! Allocates global array 'mesh_element'
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine mesh_spectral_build_elements()
|
||||
integer :: &
|
||||
e, &
|
||||
elemOffset
|
||||
subroutine mesh_spectral_build_elements
|
||||
|
||||
integer :: &
|
||||
e, &
|
||||
elemOffset
|
||||
|
||||
allocate(mesh_element (4_pInt+8_pInt,theMesh%nElems), source = 0_pInt)
|
||||
allocate(mesh_element (4+8,theMesh%nElems), source = 0)
|
||||
|
||||
elemOffset = product(grid(1:2))*grid3Offset
|
||||
do e=1, theMesh%nElems
|
||||
mesh_element( 1,e) = -1_pInt ! DEPRECATED
|
||||
mesh_element( 2,e) = -1_pInt ! DEPRECATED
|
||||
mesh_element( 3,e) = mesh_homogenizationAt(e)
|
||||
mesh_element( 4,e) = microGlobal(e+elemOffset) ! microstructure
|
||||
mesh_element( 5,e) = e + (e-1_pInt)/grid(1) + &
|
||||
((e-1_pInt)/(grid(1)*grid(2)))*(grid(1)+1_pInt) ! base node
|
||||
mesh_element( 6,e) = mesh_element(5,e) + 1_pInt
|
||||
mesh_element( 7,e) = mesh_element(5,e) + grid(1) + 2_pInt
|
||||
mesh_element( 8,e) = mesh_element(5,e) + grid(1) + 1_pInt
|
||||
mesh_element( 9,e) = mesh_element(5,e) +(grid(1) + 1_pInt) * (grid(2) + 1_pInt) ! second floor base node
|
||||
mesh_element(10,e) = mesh_element(9,e) + 1_pInt
|
||||
mesh_element(11,e) = mesh_element(9,e) + grid(1) + 2_pInt
|
||||
mesh_element(12,e) = mesh_element(9,e) + grid(1) + 1_pInt
|
||||
enddo
|
||||
elemOffset = product(grid(1:2))*grid3Offset
|
||||
do e=1, theMesh%nElems
|
||||
mesh_element( 1,e) = -1 ! DEPRECATED
|
||||
mesh_element( 2,e) = -1 ! DEPRECATED
|
||||
mesh_element( 3,e) = mesh_homogenizationAt(e)
|
||||
mesh_element( 4,e) = microGlobal(e+elemOffset) ! microstructure
|
||||
mesh_element( 5,e) = e + (e-1)/grid(1) + &
|
||||
((e-1)/(grid(1)*grid(2)))*(grid(1)+1) ! base node
|
||||
mesh_element( 6,e) = mesh_element(5,e) + 1
|
||||
mesh_element( 7,e) = mesh_element(5,e) + grid(1) + 2
|
||||
mesh_element( 8,e) = mesh_element(5,e) + grid(1) + 1
|
||||
mesh_element( 9,e) = mesh_element(5,e) +(grid(1) + 1) * (grid(2) + 1) ! second floor base node
|
||||
mesh_element(10,e) = mesh_element(9,e) + 1
|
||||
mesh_element(11,e) = mesh_element(9,e) + grid(1) + 2
|
||||
mesh_element(12,e) = mesh_element(9,e) + grid(1) + 1
|
||||
enddo
|
||||
|
||||
end subroutine mesh_spectral_build_elements
|
||||
|
||||
|
|
@ -447,50 +428,50 @@ end subroutine mesh_spectral_build_elements
|
|||
!--------------------------------------------------------------------------------------------------
|
||||
subroutine mesh_spectral_build_ipNeighborhood
|
||||
|
||||
integer :: &
|
||||
x,y,z, &
|
||||
e
|
||||
allocate(mesh_ipNeighborhood(3,6,1,theMesh%nElems),source=0_pInt)
|
||||
integer :: &
|
||||
x,y,z, &
|
||||
e
|
||||
allocate(mesh_ipNeighborhood(3,6,1,theMesh%nElems),source=0)
|
||||
|
||||
e = 0_pInt
|
||||
do z = 0_pInt,grid3-1_pInt
|
||||
do y = 0_pInt,grid(2)-1_pInt
|
||||
do x = 0_pInt,grid(1)-1_pInt
|
||||
e = e + 1_pInt
|
||||
mesh_ipNeighborhood(1,1,1,e) = z * grid(1) * grid(2) &
|
||||
+ y * grid(1) &
|
||||
+ modulo(x+1_pInt,grid(1)) &
|
||||
+ 1_pInt
|
||||
mesh_ipNeighborhood(1,2,1,e) = z * grid(1) * grid(2) &
|
||||
+ y * grid(1) &
|
||||
+ modulo(x-1_pInt,grid(1)) &
|
||||
+ 1_pInt
|
||||
mesh_ipNeighborhood(1,3,1,e) = z * grid(1) * grid(2) &
|
||||
+ modulo(y+1_pInt,grid(2)) * grid(1) &
|
||||
+ x &
|
||||
+ 1_pInt
|
||||
mesh_ipNeighborhood(1,4,1,e) = z * grid(1) * grid(2) &
|
||||
+ modulo(y-1_pInt,grid(2)) * grid(1) &
|
||||
+ x &
|
||||
+ 1_pInt
|
||||
mesh_ipNeighborhood(1,5,1,e) = modulo(z+1_pInt,grid3) * grid(1) * grid(2) &
|
||||
+ y * grid(1) &
|
||||
+ x &
|
||||
+ 1_pInt
|
||||
mesh_ipNeighborhood(1,6,1,e) = modulo(z-1_pInt,grid3) * grid(1) * grid(2) &
|
||||
+ y * grid(1) &
|
||||
+ x &
|
||||
+ 1_pInt
|
||||
mesh_ipNeighborhood(2,1:6,1,e) = 1_pInt
|
||||
mesh_ipNeighborhood(3,1,1,e) = 2_pInt
|
||||
mesh_ipNeighborhood(3,2,1,e) = 1_pInt
|
||||
mesh_ipNeighborhood(3,3,1,e) = 4_pInt
|
||||
mesh_ipNeighborhood(3,4,1,e) = 3_pInt
|
||||
mesh_ipNeighborhood(3,5,1,e) = 6_pInt
|
||||
mesh_ipNeighborhood(3,6,1,e) = 5_pInt
|
||||
enddo
|
||||
enddo
|
||||
enddo
|
||||
e = 0
|
||||
do z = 0,grid3-1
|
||||
do y = 0,grid(2)-1
|
||||
do x = 0,grid(1)-1
|
||||
e = e + 1
|
||||
mesh_ipNeighborhood(1,1,1,e) = z * grid(1) * grid(2) &
|
||||
+ y * grid(1) &
|
||||
+ modulo(x+1,grid(1)) &
|
||||
+ 1
|
||||
mesh_ipNeighborhood(1,2,1,e) = z * grid(1) * grid(2) &
|
||||
+ y * grid(1) &
|
||||
+ modulo(x-1,grid(1)) &
|
||||
+ 1
|
||||
mesh_ipNeighborhood(1,3,1,e) = z * grid(1) * grid(2) &
|
||||
+ modulo(y+1,grid(2)) * grid(1) &
|
||||
+ x &
|
||||
+ 1
|
||||
mesh_ipNeighborhood(1,4,1,e) = z * grid(1) * grid(2) &
|
||||
+ modulo(y-1,grid(2)) * grid(1) &
|
||||
+ x &
|
||||
+ 1
|
||||
mesh_ipNeighborhood(1,5,1,e) = modulo(z+1,grid3) * grid(1) * grid(2) &
|
||||
+ y * grid(1) &
|
||||
+ x &
|
||||
+ 1
|
||||
mesh_ipNeighborhood(1,6,1,e) = modulo(z-1,grid3) * grid(1) * grid(2) &
|
||||
+ y * grid(1) &
|
||||
+ x &
|
||||
+ 1
|
||||
mesh_ipNeighborhood(2,1:6,1,e) = 1
|
||||
mesh_ipNeighborhood(3,1,1,e) = 2
|
||||
mesh_ipNeighborhood(3,2,1,e) = 1
|
||||
mesh_ipNeighborhood(3,3,1,e) = 4
|
||||
mesh_ipNeighborhood(3,4,1,e) = 3
|
||||
mesh_ipNeighborhood(3,5,1,e) = 6
|
||||
mesh_ipNeighborhood(3,6,1,e) = 5
|
||||
enddo
|
||||
enddo
|
||||
enddo
|
||||
|
||||
end subroutine mesh_spectral_build_ipNeighborhood
|
||||
|
||||
|
|
@ -499,41 +480,37 @@ end subroutine mesh_spectral_build_ipNeighborhood
|
|||
!> @brief builds mesh of (distorted) cubes for given coordinates (= center of the cubes)
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
function mesh_nodesAroundCentres(gDim,Favg,centres) result(nodes)
|
||||
use debug, only: &
|
||||
debug_mesh, &
|
||||
debug_level, &
|
||||
debug_levelBasic
|
||||
|
||||
real(pReal), intent(in), dimension(:,:,:,:) :: &
|
||||
centres
|
||||
real(pReal), dimension(3,size(centres,2)+1,size(centres,3)+1,size(centres,4)+1) :: &
|
||||
nodes
|
||||
real(pReal), intent(in), dimension(3) :: &
|
||||
gDim
|
||||
real(pReal), intent(in), dimension(3,3) :: &
|
||||
Favg
|
||||
real(pReal), dimension(3,size(centres,2)+2,size(centres,3)+2,size(centres,4)+2) :: &
|
||||
wrappedCentres
|
||||
real(pReal), intent(in), dimension(:,:,:,:) :: &
|
||||
centres
|
||||
real(pReal), dimension(3,size(centres,2)+1,size(centres,3)+1,size(centres,4)+1) :: &
|
||||
nodes
|
||||
real(pReal), intent(in), dimension(3) :: &
|
||||
gDim
|
||||
real(pReal), intent(in), dimension(3,3) :: &
|
||||
Favg
|
||||
real(pReal), dimension(3,size(centres,2)+2,size(centres,3)+2,size(centres,4)+2) :: &
|
||||
wrappedCentres
|
||||
|
||||
integer :: &
|
||||
i,j,k,n
|
||||
integer, dimension(3), parameter :: &
|
||||
diag = 1_pInt
|
||||
integer, dimension(3) :: &
|
||||
shift = 0_pInt, &
|
||||
lookup = 0_pInt, &
|
||||
me = 0_pInt, &
|
||||
iRes = 0_pInt
|
||||
integer, dimension(3,8) :: &
|
||||
neighbor = reshape([ &
|
||||
0_pInt, 0_pInt, 0_pInt, &
|
||||
1_pInt, 0_pInt, 0_pInt, &
|
||||
1_pInt, 1_pInt, 0_pInt, &
|
||||
0_pInt, 1_pInt, 0_pInt, &
|
||||
0_pInt, 0_pInt, 1_pInt, &
|
||||
1_pInt, 0_pInt, 1_pInt, &
|
||||
1_pInt, 1_pInt, 1_pInt, &
|
||||
0_pInt, 1_pInt, 1_pInt ], [3,8])
|
||||
integer :: &
|
||||
i,j,k,n
|
||||
integer, dimension(3), parameter :: &
|
||||
diag = 1
|
||||
integer, dimension(3) :: &
|
||||
shift = 0, &
|
||||
lookup = 0, &
|
||||
me = 0, &
|
||||
iRes = 0
|
||||
integer, dimension(3,8) :: &
|
||||
neighbor = reshape([ &
|
||||
0, 0, 0, &
|
||||
1, 0, 0, &
|
||||
1, 1, 0, &
|
||||
0, 1, 0, &
|
||||
0, 0, 1, &
|
||||
1, 0, 1, &
|
||||
1, 1, 1, &
|
||||
0, 1, 1 ], [3,8])
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
! initializing variables
|
||||
|
|
@ -541,43 +518,35 @@ function mesh_nodesAroundCentres(gDim,Favg,centres) result(nodes)
|
|||
nodes = 0.0_pReal
|
||||
wrappedCentres = 0.0_pReal
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
! report
|
||||
if (iand(debug_level(debug_mesh),debug_levelBasic) /= 0_pInt) then
|
||||
write(6,'(a)') ' Meshing cubes around centroids'
|
||||
write(6,'(a,3(e12.5))') ' Dimension: ', gDim
|
||||
write(6,'(a,3(i5))') ' Resolution:', iRes
|
||||
endif
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
! building wrappedCentres = centroids + ghosts
|
||||
wrappedCentres(1:3,2_pInt:iRes(1)+1_pInt,2_pInt:iRes(2)+1_pInt,2_pInt:iRes(3)+1_pInt) = centres
|
||||
do k = 0_pInt,iRes(3)+1_pInt
|
||||
do j = 0_pInt,iRes(2)+1_pInt
|
||||
do i = 0_pInt,iRes(1)+1_pInt
|
||||
if (k==0_pInt .or. k==iRes(3)+1_pInt .or. & ! z skin
|
||||
j==0_pInt .or. j==iRes(2)+1_pInt .or. & ! y skin
|
||||
i==0_pInt .or. i==iRes(1)+1_pInt ) then ! x skin
|
||||
me = [i,j,k] ! me on skin
|
||||
shift = sign(abs(iRes+diag-2_pInt*me)/(iRes+diag),iRes+diag-2_pInt*me)
|
||||
lookup = me-diag+shift*iRes
|
||||
wrappedCentres(1:3,i+1_pInt, j+1_pInt, k+1_pInt) = &
|
||||
centres(1:3,lookup(1)+1_pInt,lookup(2)+1_pInt,lookup(3)+1_pInt) &
|
||||
- matmul(Favg, real(shift,pReal)*gDim)
|
||||
endif
|
||||
enddo; enddo; enddo
|
||||
wrappedCentres(1:3,2:iRes(1)+1,2:iRes(2)+1,2:iRes(3)+1) = centres
|
||||
do k = 0,iRes(3)+1
|
||||
do j = 0,iRes(2)+1
|
||||
do i = 0,iRes(1)+1
|
||||
if (k==0 .or. k==iRes(3)+1 .or. & ! z skin
|
||||
j==0 .or. j==iRes(2)+1 .or. & ! y skin
|
||||
i==0 .or. i==iRes(1)+1 ) then ! x skin
|
||||
me = [i,j,k] ! me on skin
|
||||
shift = sign(abs(iRes+diag-2*me)/(iRes+diag),iRes+diag-2*me)
|
||||
lookup = me-diag+shift*iRes
|
||||
wrappedCentres(1:3,i+1, j+1, k+1) = &
|
||||
centres(1:3,lookup(1)+1,lookup(2)+1,lookup(3)+1) &
|
||||
- matmul(Favg, real(shift,pReal)*gDim)
|
||||
endif
|
||||
enddo; enddo; enddo
|
||||
|
||||
!--------------------------------------------------------------------------------------------------
|
||||
! averaging
|
||||
do k = 0_pInt,iRes(3); do j = 0_pInt,iRes(2); do i = 0_pInt,iRes(1)
|
||||
do n = 1_pInt,8_pInt
|
||||
nodes(1:3,i+1_pInt,j+1_pInt,k+1_pInt) = &
|
||||
nodes(1:3,i+1_pInt,j+1_pInt,k+1_pInt) + wrappedCentres(1:3,i+1_pInt+neighbor(1,n), &
|
||||
j+1_pInt+neighbor(2,n), &
|
||||
k+1_pInt+neighbor(3,n) )
|
||||
enddo
|
||||
enddo; enddo; enddo
|
||||
nodes = nodes/8.0_pReal
|
||||
do k = 0,iRes(3); do j = 0,iRes(2); do i = 0,iRes(1)
|
||||
do n = 1,8
|
||||
nodes(1:3,i+1,j+1,k+1) = &
|
||||
nodes(1:3,i+1,j+1,k+1) + wrappedCentres(1:3,i+1+neighbor(1,n), &
|
||||
j+1+neighbor(2,n), &
|
||||
k+1+neighbor(3,n) )
|
||||
enddo
|
||||
enddo; enddo; enddo
|
||||
nodes = nodes/8.0_pReal
|
||||
|
||||
end function mesh_nodesAroundCentres
|
||||
|
||||
|
|
|
|||
Loading…
Reference in New Issue