VTK class and orientation class are thoroughly tested
This commit is contained in:
Martin Diehl
parent
ebaae151f5
commit
c00a203527
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@ -192,21 +192,6 @@ Post_addGradient:
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- master
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- release
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Post_ParaviewRelated:
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stage: postprocessing
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script: ParaviewRelated/test.py
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except:
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- master
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- release
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Post_OrientationConversion:
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stage: postprocessing
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script:
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- OrientationConversion/test.py
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except:
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- master
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- release
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Post_OrientationAverageMisorientation:
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stage: postprocessing
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script:
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2
PRIVATE
2
PRIVATE
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@ -1 +1 @@
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Subproject commit 8318aa6b9b1ef2c59c1f6fa946ede92640baf93c
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Subproject commit 073913bf152b3c48f358dfbea5145807c0f7690d
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@ -1,65 +0,0 @@
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#!/usr/bin/env python3
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import os
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import sys
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from io import StringIO
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from optparse import OptionParser
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import numpy as np
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import damask
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scriptName = os.path.splitext(os.path.basename(__file__))[0]
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scriptID = ' '.join([scriptName,damask.version])
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# --------------------------------------------------------------------
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# MAIN
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# --------------------------------------------------------------------
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parser = OptionParser(option_class=damask.extendableOption,
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usage='%prog options [ASCIItable(s)]',
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description = 'Add scalars/vectors, tensors, and/or a RGB tuples from ASCIItable '
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+ 'to existing VTK file (.vtr/.vtu/.vtp).',
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version = scriptID)
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parser.add_option( '--vtk',
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dest = 'vtk',
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type = 'string', metavar = 'string',
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help = 'VTK file name')
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parser.add_option('-d', '--data',
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dest = 'data',
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action = 'extend', metavar = '<string LIST>',
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help = 'scalar/vector value(s) label(s)')
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parser.add_option('-t', '--tensor',
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dest = 'tensor',
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action = 'extend', metavar = '<string LIST>',
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help = 'tensor (3x3) value label(s)')
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parser.add_option('-c', '--color',
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dest = 'color',
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action = 'extend', metavar = '<string LIST>',
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help = 'RGB color tuple label')
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parser.set_defaults(data = [],
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tensor = [],
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color = [],
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)
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(options, filenames) = parser.parse_args()
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if filenames == []: filenames = [None]
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if not options.vtk:
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parser.error('No VTK file specified.')
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for name in filenames:
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damask.util.report(scriptName,name)
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table = damask.Table.from_ASCII(StringIO(''.join(sys.stdin.read())) if name is None else name)
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vtk = damask.VTK.from_file(options.vtk)
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for data in options.data+options.tensor:
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vtk.add(table.get(data),data)
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for color in options.color:
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vtk.add((table.get(color)*255).astype(np.uint8),color)
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vtk.write(options.vtk)
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@ -1,45 +0,0 @@
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#!/usr/bin/env python3
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import os
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import sys
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from io import StringIO
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from optparse import OptionParser
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import damask
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scriptName = os.path.splitext(os.path.basename(__file__))[0]
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scriptID = ' '.join([scriptName,damask.version])
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# --------------------------------------------------------------------
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# MAIN
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# --------------------------------------------------------------------
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parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [ASCIItable(s)]', description = """
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Produce a VTK point cloud dataset based on coordinates given in an ASCIItable.
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""", version = scriptID)
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parser.add_option('-p',
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'--pos', '--position',
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dest = 'pos',
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type = 'string', metavar = 'string',
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help = 'label of coordinates [%default]')
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parser.set_defaults(pos = 'pos',
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)
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(options, filenames) = parser.parse_args()
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if filenames == []: filenames = [None]
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for name in filenames:
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damask.util.report(scriptName,name)
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table = damask.Table.from_ASCII(StringIO(''.join(sys.stdin.read())) if name is None else name)
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v = damask.VTK.from_polyData(table.get(options.pos))
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if name:
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v.write(os.path.splitext(name)[0])
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else:
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sys.stdout.write(v.__repr__())
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@ -1,58 +0,0 @@
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#!/usr/bin/env python3
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import os
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import sys
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from io import StringIO
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from optparse import OptionParser
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import damask
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scriptName = os.path.splitext(os.path.basename(__file__))[0]
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scriptID = ' '.join([scriptName,damask.version])
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# --------------------------------------------------------------------
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# MAIN
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# --------------------------------------------------------------------
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parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [ASCIItable(s)]', description = """
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Create regular voxel grid from points in an ASCIItable.
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""", version = scriptID)
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parser.add_option('-m',
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'--mode',
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dest = 'mode',
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metavar='string',
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type = 'choice', choices = ['cell','point'],
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help = 'cell-centered or point-centered coordinates')
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parser.add_option('-p',
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'--pos', '--position',
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dest = 'pos',
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type = 'string', metavar = 'string',
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help = 'label of coordinates [%default]')
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parser.set_defaults(mode = 'cell',
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pos = 'pos',
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)
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(options, filenames) = parser.parse_args()
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if filenames == []: filenames = [None]
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for name in filenames:
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damask.util.report(scriptName,name)
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table = damask.Table.from_ASCII(StringIO(''.join(sys.stdin.read())) if name is None else name)
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if options.mode == 'cell':
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grid, size, origin = damask.grid_filters.cell_coord0_gridSizeOrigin(table.get(options.pos))
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elif options.mode == 'point':
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grid, size, origin = damask.grid_filters.node_coord0_gridSizeOrigin(table.get(options.pos))
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v = damask.VTK.from_rectilinearGrid(grid,size,origin)
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if name:
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v.write('{}_{}({})'.format(os.path.splitext(name)[0],options.pos,options.mode))
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else:
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sys.stdout.write(v.__repr__())
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