Merge branch 'damage_restart_yi_clean' into 'development'

add back and clean damage restart functionality with checked tests

See merge request damask/DAMASK!629

PRIVATE

@@ -1 +1 @@
-Subproject commit ecfe3b3f057f4f81b3b1a12399bf238bc2546de7
+Subproject commit e4ac967b2fbbe91242ecbbfa41e1c019dd1c3316

src/grid/DAMASK_grid.f90

@@ -482,6 +482,8 @@ program DAMASK_grid
                 call mechanical_restartWrite
               case(FIELD_THERMAL_ID)
                 call grid_thermal_spectral_restartWrite
+              case(FIELD_DAMAGE_ID)
+                call grid_damage_spectral_restartWrite
             end select
           end do
           call materialpoint_restartWrite

src/grid/grid_damage_spectral.f90

@@ -16,6 +16,9 @@ module grid_damage_spectral
   use prec
   use parallelization
   use IO
+  use CLI
+  use HDF5_utilities
+  use HDF5
   use spectral_utilities
   use discretization_grid
   use homogenization
@@ -59,13 +62,13 @@ module grid_damage_spectral
   public :: &
     grid_damage_spectral_init, &
     grid_damage_spectral_solution, &
+    grid_damage_spectral_restartWrite, &
     grid_damage_spectral_forward
 
 contains
 
 !--------------------------------------------------------------------------------------------------
 !> @brief allocates all neccessary fields and fills them with data
-! ToDo: Restart not implemented
 !--------------------------------------------------------------------------------------------------
 subroutine grid_damage_spectral_init()
 
@@ -76,6 +79,8 @@ subroutine grid_damage_spectral_init()
   Vec :: uBound, lBound
   integer(MPI_INTEGER_KIND) :: err_MPI
   PetscErrorCode :: err_PETSc
+  integer(HID_T) :: fileHandle, groupHandle
+  real(pReal), dimension(1,product(cells(1:2))*cells3) :: tempN
   type(tDict), pointer :: &
     num_grid, &
     num_generic
@@ -167,6 +172,18 @@ subroutine grid_damage_spectral_init()
     CHKERRQ(err_PETSc)
   end if
 
+  restartRead: if (CLI_restartInc > 0) then
+    print'(/,1x,a,i0,a)', 'reading restart data of increment ', CLI_restartInc, ' from file'
+
+    fileHandle  = HDF5_openFile(getSolverJobName()//'_restart.hdf5','r')
+    groupHandle = HDF5_openGroup(fileHandle,'solver')
+
+    call HDF5_read(tempN,groupHandle,'phi',.false.)
+    phi = reshape(tempN,[cells(1),cells(2),cells3])
+    call HDF5_read(tempN,groupHandle,'phi_lastInc',.false.)
+    phi_lastInc = reshape(tempN,[cells(1),cells(2),cells3])
+  end if restartRead
+
   ce = 0
   do k = 1, cells3; do j = 1, cells(2); do i = 1, cells(1)
     ce = ce + 1
@@ -285,6 +302,36 @@ subroutine grid_damage_spectral_forward(cutBack)
 end subroutine grid_damage_spectral_forward
 
 
+!--------------------------------------------------------------------------------------------------
+!> @brief Write current solver and constitutive data for restart to file.
+!--------------------------------------------------------------------------------------------------
+subroutine grid_damage_spectral_restartWrite
+
+  PetscErrorCode :: err_PETSc
+  DM :: dm_local
+  integer(HID_T) :: fileHandle, groupHandle
+  PetscScalar, dimension(:,:,:), pointer :: phi
+
+  call SNESGetDM(SNES_damage,dm_local,err_PETSc);
+  CHKERRQ(err_PETSc)
+  call DMDAVecGetArrayF90(dm_local,solution_vec,phi,err_PETSc);
+  CHKERRQ(err_PETSc)
+
+  print'(1x,a)', 'writing damage solver data required for restart to file'; flush(IO_STDOUT)
+
+  fileHandle  = HDF5_openFile(getSolverJobName()//'_restart.hdf5','a')
+  groupHandle = HDF5_openGroup(fileHandle,'solver')
+  call HDF5_write(reshape(phi,[1,product(cells(1:2))*cells3]),groupHandle,'phi')
+  call HDF5_write(reshape(phi_lastInc,[1,product(cells(1:2))*cells3]),groupHandle,'phi_lastInc')
+  call HDF5_closeGroup(groupHandle)
+  call HDF5_closeFile(fileHandle)
+
+  call DMDAVecRestoreArrayF90(dm_local,solution_vec,phi,err_PETSc);
+  CHKERRQ(err_PETSc)
+
+end subroutine grid_damage_spectral_restartWrite
+
+
 !--------------------------------------------------------------------------------------------------
 !> @brief Construct the residual vector.
 !--------------------------------------------------------------------------------------------------
@@ -329,7 +376,7 @@ end subroutine formResidual
 
 
 !--------------------------------------------------------------------------------------------------
-!> @brief update reference viscosity and conductivity
+!> @brief Update reference viscosity and conductivity.
 !--------------------------------------------------------------------------------------------------
 subroutine updateReference()
 

src/grid/grid_thermal_spectral.f90

@@ -281,7 +281,7 @@ end subroutine grid_thermal_spectral_forward
 
 
 !--------------------------------------------------------------------------------------------------
-!> @brief Write current solver and constitutive data for restart to file
+!> @brief Write current solver and constitutive data for restart to file.
 !--------------------------------------------------------------------------------------------------
 subroutine grid_thermal_spectral_restartWrite
 
@@ -313,7 +313,7 @@ end subroutine grid_thermal_spectral_restartWrite
 
 
 !--------------------------------------------------------------------------------------------------
-!> @brief forms the spectral thermal residual vector
+!> @brief Construct the residual vector.
 !--------------------------------------------------------------------------------------------------
 subroutine formResidual(in,x_scal,r,dummy,err_PETSc)
 
@@ -356,7 +356,7 @@ end subroutine formResidual
 
 
 !--------------------------------------------------------------------------------------------------
-!> @brief update reference viscosity and conductivity
+!> @brief Update reference viscosity and conductivity.
 !--------------------------------------------------------------------------------------------------
 subroutine updateReference()
 

src/homogenization.f90

@@ -406,6 +406,9 @@ subroutine homogenization_restartWrite(fileHandle)
 
     call HDF5_write(homogState(ho)%state,groupHandle(2),'omega_mechanical') ! ToDo: should be done by mech
 
+    if(damageState_h(ho)%sizeState > 0) &
+      call HDF5_write(damageState_h(ho)%state,groupHandle(2),'omega_damage') ! ToDo: should be done by mech
+
     call HDF5_closeGroup(groupHandle(2))
 
   end do
@@ -433,6 +436,9 @@ subroutine homogenization_restartRead(fileHandle)
 
     call HDF5_read(homogState(ho)%state0,groupHandle(2),'omega_mechanical') ! ToDo: should be done by mech
 
+    if(damageState_h(ho)%sizeState > 0) &
+      call HDF5_read(damageState_h(ho)%state0,groupHandle(2),'omega_damage') ! ToDo: should be done by mech
+
     call HDF5_closeGroup(groupHandle(2))
 
   end do

src/homogenization_damage.f90

@@ -80,11 +80,15 @@ module subroutine damage_partition(ce)
   integer, intent(in) :: ce
 
   real(pReal) :: phi
+  integer :: co
 
 
   if(damageState_h(material_homogenizationID(ce))%sizeState < 1) return
   phi = damagestate_h(material_homogenizationID(ce))%state(1,material_homogenizationEntry(ce))
-  call phase_set_phi(phi,1,ce)
+  do co = 1, homogenization_Nconstituents(material_homogenizationID(ce))
+    call phase_set_phi(phi,co,ce)
+  end do
+
 
 end subroutine damage_partition
 

src/phase.f90

@@ -160,6 +160,11 @@ module phase
       integer, intent(in) :: ph
     end subroutine thermal_restartWrite
 
+    module subroutine damage_restartWrite(groupHandle,ph)
+      integer(HID_T), intent(in) :: groupHandle
+      integer, intent(in) :: ph
+    end subroutine damage_restartWrite
+
     module subroutine mechanical_restartRead(groupHandle,ph)
       integer(HID_T), intent(in) :: groupHandle
       integer, intent(in) :: ph
@@ -170,6 +175,11 @@ module phase
       integer, intent(in) :: ph
     end subroutine thermal_restartRead
 
+    module subroutine damage_restartRead(groupHandle,ph)
+      integer(HID_T), intent(in) :: groupHandle
+      integer, intent(in) :: ph
+    end subroutine damage_restartRead
+
     module function mechanical_S(ph,en) result(S)
       integer, intent(in) :: ph,en
       real(pReal), dimension(3,3) :: S
@@ -674,6 +684,7 @@ subroutine phase_restartWrite(fileHandle)
 
     call mechanical_restartWrite(groupHandle(2),ph)
     call thermal_restartWrite(groupHandle(2),ph)
+    call damage_restartWrite(groupHandle(2),ph)
 
     call HDF5_closeGroup(groupHandle(2))
 
@@ -703,6 +714,7 @@ subroutine phase_restartRead(fileHandle)
 
     call mechanical_restartRead(groupHandle(2),ph)
     call thermal_restartRead(groupHandle(2),ph)
+    call damage_restartRead(groupHandle(2),ph)
 
     call HDF5_closeGroup(groupHandle(2))
 

src/phase_damage.f90

@@ -1,6 +1,6 @@
-!----------------------------------------------------------------------------------------------------
+!--------------------------------------------------------------------------------------------------
 !> @brief internal microstructure state for all damage sources and kinematics constitutive models
-!----------------------------------------------------------------------------------------------------
+!--------------------------------------------------------------------------------------------------
 submodule(phase) damage
 
   type :: tDamageParameters
@@ -310,6 +310,35 @@ function integrateDamageState(Delta_t,ph,en) result(broken)
 end function integrateDamageState
 
 
+module subroutine damage_restartWrite(groupHandle,ph)
+
+  integer(HID_T), intent(in) :: groupHandle
+  integer, intent(in) :: ph
+
+
+  select case(phase_damage(ph))
+    case(DAMAGE_ISOBRITTLE_ID,DAMAGE_ANISOBRITTLE_ID)
+      call HDF5_write(damageState(ph)%state,groupHandle,'omega_damage')
+  end select
+
+end subroutine damage_restartWrite
+
+
+module subroutine damage_restartRead(groupHandle,ph)
+
+  integer(HID_T), intent(in) :: groupHandle
+  integer, intent(in) :: ph
+
+
+  select case(phase_damage(ph))
+    case(DAMAGE_ISOBRITTLE_ID,DAMAGE_ANISOBRITTLE_ID)
+  call HDF5_read(damageState(ph)%state0,groupHandle,'omega_damage')
+  end select
+
+
+end subroutine damage_restartRead
+
+
 !----------------------------------------------------------------------------------------------
 !< @brief writes damage sources results to HDF5 output file
 !----------------------------------------------------------------------------------------------