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DAMASK_EICMD
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using current naming scheme

This commit is contained in:
Martin Diehl 2021-05-22 13:36:23 +02:00
parent ee80efd705
commit af9fa9e9a1
2 changed files with 33 additions and 34 deletions
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4
src/material.f90
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@ -68,8 +68,8 @@ subroutine material_init(restart)
if (.not. restart) then if (.not. restart) then
call results_openJobFile call results_openJobFile
call results_mapping_phase(material_phaseID,material_phaseMemberAt,material_name_phase) call results_mapping_phase(material_phaseID,material_phaseEntry,material_name_phase)
call results_mapping_homogenization(material_homogenizationID,material_homogenizationMemberAt,material_name_homogenization) call results_mapping_homogenization(material_homogenizationID,material_homogenizationEntry,material_name_homogenization)
call results_closeJobFile call results_closeJobFile
endif endif

63
src/results.f90
View File

@ -415,15 +415,15 @@ end subroutine results_writeTensorDataset_int
!-------------------------------------------------------------------------------------------------- !--------------------------------------------------------------------------------------------------
!> @brief adds the unique mapping from spatial position and constituent ID to results !> @brief adds the unique mapping from spatial position and constituent ID to results
!-------------------------------------------------------------------------------------------------- !--------------------------------------------------------------------------------------------------
subroutine results_mapping_phase(phaseID,memberAtLocal,label) subroutine results_mapping_phase(ID,entry,label)
integer, dimension(:,:), intent(in) :: phaseID !< phase ID at (constituent,ce) integer, dimension(:,:), intent(in) :: ID !< phase ID at (co,ce)
integer, dimension(:,:,:), intent(in) :: memberAtLocal !< phase entry at (constituent,IP,element) integer, dimension(:,:), intent(in) :: entry !< phase entry at (co,ce)
character(len=*), dimension(:), intent(in) :: label !< label of each phase section character(len=*), dimension(:), intent(in) :: label !< label of each phase section
integer, dimension(size(memberAtLocal,1),size(memberAtLocal,2),size(memberAtLocal,3)) :: & integer, dimension(size(entry,1),size(entry,2)) :: &
memberAtGlobal entryGlobal
integer, dimension(size(label),0:worldsize-1) :: memberOffset !< offset in entry counting per process integer, dimension(size(label),0:worldsize-1) :: entryOffset !< offset in entry counting per process
integer, dimension(0:worldsize-1) :: writeSize !< amount of data written per process integer, dimension(0:worldsize-1) :: writeSize !< amount of data written per process
integer(HSIZE_T), dimension(2) :: & integer(HSIZE_T), dimension(2) :: &
myShape, & !< shape of the dataset (this process) myShape, & !< shape of the dataset (this process)
@ -444,16 +444,17 @@ subroutine results_mapping_phase(phaseID,memberAtLocal,label)
integer(SIZE_T) :: type_size_string, type_size_int integer(SIZE_T) :: type_size_string, type_size_int
integer :: hdferr, ierr, i integer :: hdferr, ierr, i
!-------------------------------------------------------------------------------------------------- !--------------------------------------------------------------------------------------------------
! prepare MPI communication (transparent for non-MPI runs) ! prepare MPI communication (transparent for non-MPI runs)
call h5pcreate_f(H5P_DATASET_XFER_F, plist_id, hdferr) call h5pcreate_f(H5P_DATASET_XFER_F, plist_id, hdferr)
if(hdferr < 0) error stop 'HDF5 error' if(hdferr < 0) error stop 'HDF5 error'
memberOffset = 0 entryOffset = 0
do i=1, size(label) do i=1, size(label)
memberOffset(i,worldrank) = count(phaseID == i) ! number of entries of this process entryOffset(i,worldrank) = count(ID == i) ! number of entries of this process
enddo enddo
writeSize = 0 writeSize = 0
writeSize(worldrank) = size(memberAtLocal(1,:,:)) ! total number of entries of this process writeSize(worldrank) = size(entry(1,:)) ! total number of entries of this process
!-------------------------------------------------------------------------------------------------- !--------------------------------------------------------------------------------------------------
! MPI settings and communication ! MPI settings and communication
@ -464,19 +465,18 @@ subroutine results_mapping_phase(phaseID,memberAtLocal,label)
call MPI_allreduce(MPI_IN_PLACE,writeSize,worldsize,MPI_INT,MPI_SUM,PETSC_COMM_WORLD,ierr) ! get output at each process call MPI_allreduce(MPI_IN_PLACE,writeSize,worldsize,MPI_INT,MPI_SUM,PETSC_COMM_WORLD,ierr) ! get output at each process
if(ierr /= 0) error stop 'MPI error' if(ierr /= 0) error stop 'MPI error'
call MPI_allreduce(MPI_IN_PLACE,memberOffset,size(memberOffset),MPI_INT,MPI_SUM,PETSC_COMM_WORLD,ierr)! get offset at each process call MPI_allreduce(MPI_IN_PLACE,entryOffset,size(entryOffset),MPI_INT,MPI_SUM,PETSC_COMM_WORLD,ierr)! get offset at each process
if(ierr /= 0) error stop 'MPI error' if(ierr /= 0) error stop 'MPI error'
#endif #endif
myShape = int([size(phaseID,1),writeSize(worldrank)], HSIZE_T) myShape = int([size(ID,1),writeSize(worldrank)], HSIZE_T)
myOffset = int([0,sum(writeSize(0:worldrank-1))], HSIZE_T) myOffset = int([0,sum(writeSize(0:worldrank-1))], HSIZE_T)
totalShape = int([size(phaseID,1),sum(writeSize)], HSIZE_T) totalShape = int([size(ID,1),sum(writeSize)], HSIZE_T)
!--------------------------------------------------------------------------------------------------- !---------------------------------------------------------------------------------------------------
! renumber member from my process to all processes ! renumber member from my process to all processes
do i = 1, size(label) do i = 1, size(label)
where(reshape(phaseID,shape(memberAtGlobal)) == i) & where(ID == i) entryGlobal = entry + sum(entryOffset(i,0:worldrank-1)) -1 ! 0-based
memberAtGlobal = memberAtLocal + sum(memberOffset(i,0:worldrank-1)) -1 ! 0-based
enddo enddo
!--------------------------------------------------------------------------------------------------- !---------------------------------------------------------------------------------------------------
@ -533,10 +533,10 @@ subroutine results_mapping_phase(phaseID,memberAtLocal,label)
call h5dcreate_f(loc_id, 'phase', dtype_id, filespace_id, dset_id, hdferr) call h5dcreate_f(loc_id, 'phase', dtype_id, filespace_id, dset_id, hdferr)
if(hdferr < 0) error stop 'HDF5 error' if(hdferr < 0) error stop 'HDF5 error'
call h5dwrite_f(dset_id, label_id, reshape(label(pack(phaseID,.true.)),myShape), & call h5dwrite_f(dset_id, label_id, reshape(label(pack(ID,.true.)),myShape), &
myShape, hdferr, file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id) myShape, hdferr, file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
if(hdferr < 0) error stop 'HDF5 error' if(hdferr < 0) error stop 'HDF5 error'
call h5dwrite_f(dset_id, entry_id, reshape(pack(memberAtGlobal,.true.),myShape), & call h5dwrite_f(dset_id, entry_id, reshape(pack(entryGlobal,.true.),myShape), &
myShape, hdferr, file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id) myShape, hdferr, file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
if(hdferr < 0) error stop 'HDF5 error' if(hdferr < 0) error stop 'HDF5 error'
@ -565,15 +565,15 @@ end subroutine results_mapping_phase
!-------------------------------------------------------------------------------------------------- !--------------------------------------------------------------------------------------------------
!> @brief adds the unique mapping from spatial position and constituent ID to results !> @brief adds the unique mapping from spatial position and constituent ID to results
!-------------------------------------------------------------------------------------------------- !--------------------------------------------------------------------------------------------------
subroutine results_mapping_homogenization(homogenizationID,memberAtLocal,label) subroutine results_mapping_homogenization(ID,entry,label)
integer, dimension(:), intent(in) :: homogenizationID !< homogenization ID at (cell) integer, dimension(:), intent(in) :: ID !< homogenization ID at (ce)
integer, dimension(:,:), intent(in) :: memberAtLocal !< homogenization entry at (IP,element) integer, dimension(:), intent(in) :: entry !< homogenization entry at (ce)
character(len=*), dimension(:), intent(in) :: label !< label of each homogenization section character(len=*), dimension(:), intent(in) :: label !< label of each homogenization section
integer, dimension(size(memberAtLocal,1),size(memberAtLocal,2)) :: & integer, dimension(size(entry,1)) :: &
memberAtGlobal entryGlobal
integer, dimension(size(label),0:worldsize-1) :: memberOffset !< offset in entry counting per process integer, dimension(size(label),0:worldsize-1) :: entryOffset !< offset in entry counting per process
integer, dimension(0:worldsize-1) :: writeSize !< amount of data written per process integer, dimension(0:worldsize-1) :: writeSize !< amount of data written per process
integer(HSIZE_T), dimension(1) :: & integer(HSIZE_T), dimension(1) :: &
myShape, & !< shape of the dataset (this process) myShape, & !< shape of the dataset (this process)
@ -599,12 +599,12 @@ subroutine results_mapping_homogenization(homogenizationID,memberAtLocal,label)
! prepare MPI communication (transparent for non-MPI runs) ! prepare MPI communication (transparent for non-MPI runs)
call h5pcreate_f(H5P_DATASET_XFER_F, plist_id, hdferr) call h5pcreate_f(H5P_DATASET_XFER_F, plist_id, hdferr)
if(hdferr < 0) error stop 'HDF5 error' if(hdferr < 0) error stop 'HDF5 error'
memberOffset = 0 entryOffset = 0
do i=1, size(label) do i=1, size(label)
memberOffset(i,worldrank) = count(homogenizationID == i) ! number of entries of this process entryOffset(i,worldrank) = count(ID == i) ! number of entries of this process
enddo enddo
writeSize = 0 writeSize = 0
writeSize(worldrank) = size(memberAtLocal) ! total number of entries of this process writeSize(worldrank) = size(entry) ! total number of entries of this process
!-------------------------------------------------------------------------------------------------- !--------------------------------------------------------------------------------------------------
! MPI settings and communication ! MPI settings and communication
@ -615,7 +615,7 @@ subroutine results_mapping_homogenization(homogenizationID,memberAtLocal,label)
call MPI_allreduce(MPI_IN_PLACE,writeSize,worldsize,MPI_INT,MPI_SUM,PETSC_COMM_WORLD,ierr) ! get output at each process call MPI_allreduce(MPI_IN_PLACE,writeSize,worldsize,MPI_INT,MPI_SUM,PETSC_COMM_WORLD,ierr) ! get output at each process
if(ierr /= 0) error stop 'MPI error' if(ierr /= 0) error stop 'MPI error'
call MPI_allreduce(MPI_IN_PLACE,memberOffset,size(memberOffset),MPI_INT,MPI_SUM,PETSC_COMM_WORLD,ierr)! get offset at each process call MPI_allreduce(MPI_IN_PLACE,entryOffset,size(entryOffset),MPI_INT,MPI_SUM,PETSC_COMM_WORLD,ierr) ! get offset at each process
if(ierr /= 0) error stop 'MPI error' if(ierr /= 0) error stop 'MPI error'
#endif #endif
@ -626,8 +626,7 @@ subroutine results_mapping_homogenization(homogenizationID,memberAtLocal,label)
!--------------------------------------------------------------------------------------------------- !---------------------------------------------------------------------------------------------------
! renumber member from my process to all processes ! renumber member from my process to all processes
do i = 1, size(label) do i = 1, size(label)
where(reshape(homogenizationID,shape(memberAtGlobal)) == i) & where(ID == i) entryGlobal = entry + sum(entryOffset(i,0:worldrank-1)) - 1 ! 0-based
memberAtGlobal = memberAtLocal + sum(memberOffset(i,0:worldrank-1)) - 1 ! 0-based
enddo enddo
!--------------------------------------------------------------------------------------------------- !---------------------------------------------------------------------------------------------------
@ -684,10 +683,10 @@ subroutine results_mapping_homogenization(homogenizationID,memberAtLocal,label)
call h5dcreate_f(loc_id, 'homogenization', dtype_id, filespace_id, dset_id, hdferr) call h5dcreate_f(loc_id, 'homogenization', dtype_id, filespace_id, dset_id, hdferr)
if(hdferr < 0) error stop 'HDF5 error' if(hdferr < 0) error stop 'HDF5 error'
call h5dwrite_f(dset_id, label_id, reshape(label(pack(homogenizationID,.true.)),myShape), & call h5dwrite_f(dset_id, label_id, reshape(label(pack(ID,.true.)),myShape), &
myShape, hdferr, file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id) myShape, hdferr, file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
if(hdferr < 0) error stop 'HDF5 error' if(hdferr < 0) error stop 'HDF5 error'
call h5dwrite_f(dset_id, entry_id, reshape(pack(memberAtGlobal,.true.),myShape), & call h5dwrite_f(dset_id, entry_id, reshape(pack(entryGlobal,.true.),myShape), &
myShape, hdferr, file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id) myShape, hdferr, file_space_id = filespace_id, mem_space_id = memspace_id, xfer_prp = plist_id)
if(hdferr < 0) error stop 'HDF5 error' if(hdferr < 0) error stop 'HDF5 error'