Merge branch 'simplify-PETSc-access' into 'development'
Simplify pet sc access See merge request damask/DAMASK!773
This commit is contained in:
commit
ad6220c263
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@ -307,7 +307,7 @@ end subroutine grid_damage_spectral_forward
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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!> @brief Write current solver and constitutive data for restart to file.
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!> @brief Write current solver and constitutive data for restart to file.
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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subroutine grid_damage_spectral_restartWrite
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subroutine grid_damage_spectral_restartWrite()
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PetscErrorCode :: err_PETSc
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PetscErrorCode :: err_PETSc
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DM :: dm_local
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DM :: dm_local
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@ -316,7 +316,7 @@ subroutine grid_damage_spectral_restartWrite
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call SNESGetDM(SNES_damage,dm_local,err_PETSc);
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call SNESGetDM(SNES_damage,dm_local,err_PETSc);
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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call DMDAVecGetArrayF90(dm_local,solution_vec,phi,err_PETSc);
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call DMDAVecGetArrayReadF90(dm_local,solution_vec,phi,err_PETSc);
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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print'(1x,a)', 'saving damage solver data required for restart'; flush(IO_STDOUT)
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print'(1x,a)', 'saving damage solver data required for restart'; flush(IO_STDOUT)
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@ -328,7 +328,7 @@ subroutine grid_damage_spectral_restartWrite
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call HDF5_closeGroup(groupHandle)
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call HDF5_closeGroup(groupHandle)
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call HDF5_closeFile(fileHandle)
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call HDF5_closeFile(fileHandle)
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call DMDAVecRestoreArrayF90(dm_local,solution_vec,phi,err_PETSc);
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call DMDAVecRestoreArrayReadF90(dm_local,solution_vec,phi,err_PETSc);
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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end subroutine grid_damage_spectral_restartWrite
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end subroutine grid_damage_spectral_restartWrite
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@ -351,15 +351,8 @@ subroutine grid_mechanical_FEM_forward(cutBack,guess,Delta_t,Delta_t_old,t_remai
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rotation_BC
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rotation_BC
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PetscErrorCode :: err_PETSc
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PetscErrorCode :: err_PETSc
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PetscScalar, pointer, dimension(:,:,:,:) :: &
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u,u_lastInc
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call DMDAVecGetArrayF90(mechanical_grid,solution_current,u,err_PETSc)
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CHKERRQ(err_PETSc)
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call DMDAVecGetArrayF90(mechanical_grid,solution_lastInc,u_lastInc,err_PETSc)
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CHKERRQ(err_PETSc)
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if (cutBack) then
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if (cutBack) then
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C_volAvg = C_volAvgLastInc
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C_volAvg = C_volAvgLastInc
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else
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else
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@ -408,10 +401,6 @@ subroutine grid_mechanical_FEM_forward(cutBack,guess,Delta_t,Delta_t_old,t_remai
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call VecAXPY(solution_current,Delta_t,solution_rate,err_PETSc)
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call VecAXPY(solution_current,Delta_t,solution_rate,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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call DMDAVecRestoreArrayF90(mechanical_grid,solution_current,u,err_PETSc)
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CHKERRQ(err_PETSc)
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call DMDAVecRestoreArrayF90(mechanical_grid,solution_lastInc,u_lastInc,err_PETSc)
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CHKERRQ(err_PETSc)
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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! set module wide available data
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! set module wide available data
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@ -425,7 +414,7 @@ end subroutine grid_mechanical_FEM_forward
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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!> @brief Update coordinates
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!> @brief Update coordinates
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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subroutine grid_mechanical_FEM_updateCoords
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subroutine grid_mechanical_FEM_updateCoords()
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call utilities_updateCoords(F)
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call utilities_updateCoords(F)
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@ -435,16 +424,16 @@ end subroutine grid_mechanical_FEM_updateCoords
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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!> @brief Write current solver and constitutive data for restart to file
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!> @brief Write current solver and constitutive data for restart to file
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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subroutine grid_mechanical_FEM_restartWrite
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subroutine grid_mechanical_FEM_restartWrite()
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PetscErrorCode :: err_PETSc
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PetscErrorCode :: err_PETSc
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integer(HID_T) :: fileHandle, groupHandle
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integer(HID_T) :: fileHandle, groupHandle
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PetscScalar, dimension(:,:,:,:), pointer :: u,u_lastInc
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PetscScalar, dimension(:,:,:,:), pointer :: u,u_lastInc
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call DMDAVecGetArrayF90(mechanical_grid,solution_current,u,err_PETSc)
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call DMDAVecGetArrayReadF90(mechanical_grid,solution_current,u,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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call DMDAVecGetArrayF90(mechanical_grid,solution_lastInc,u_lastInc,err_PETSc)
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call DMDAVecGetArrayReadF90(mechanical_grid,solution_lastInc,u_lastInc,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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print'(1x,a)', 'saving solver data required for restart'; flush(IO_STDOUT)
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print'(1x,a)', 'saving solver data required for restart'; flush(IO_STDOUT)
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@ -471,9 +460,9 @@ subroutine grid_mechanical_FEM_restartWrite
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call HDF5_closeFile(fileHandle)
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call HDF5_closeFile(fileHandle)
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end if
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end if
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call DMDAVecRestoreArrayF90(mechanical_grid,solution_current,u,err_PETSc)
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call DMDAVecRestoreArrayReadF90(mechanical_grid,solution_current,u,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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call DMDAVecRestoreArrayF90(mechanical_grid,solution_lastInc,u_lastInc,err_PETSc)
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call DMDAVecRestoreArrayReadF90(mechanical_grid,solution_lastInc,u_lastInc,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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end subroutine grid_mechanical_FEM_restartWrite
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end subroutine grid_mechanical_FEM_restartWrite
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@ -566,7 +555,7 @@ subroutine formResidual(da_local,x_local, &
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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! get deformation gradient
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! get deformation gradient
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call DMDAVecGetArrayF90(da_local,x_local,x_scal,err_PETSc)
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call DMDAVecGetArrayReadF90(da_local,x_local,x_scal,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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do k = cells3Offset+1, cells3Offset+cells3; do j = 1, cells(2); do i = 1, cells(1)
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do k = cells3Offset+1, cells3Offset+cells3; do j = 1, cells(2); do i = 1, cells(1)
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ctr = 0
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ctr = 0
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@ -576,7 +565,7 @@ subroutine formResidual(da_local,x_local, &
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end do; end do; end do
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end do; end do; end do
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F(1:3,1:3,i,j,k-cells3Offset) = params%rotation_BC%rotate(F_aim,active=.true.) + transpose(matmul(BMat,x_elem))
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F(1:3,1:3,i,j,k-cells3Offset) = params%rotation_BC%rotate(F_aim,active=.true.) + transpose(matmul(BMat,x_elem))
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end do; end do; end do
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end do; end do; end do
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call DMDAVecRestoreArrayF90(da_local,x_local,x_scal,err_PETSc)
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call DMDAVecRestoreArrayReadF90(da_local,x_local,x_scal,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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@ -596,7 +585,7 @@ subroutine formResidual(da_local,x_local, &
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! constructing residual
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! constructing residual
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call DMDAVecGetArrayF90(da_local,f_local,r,err_PETSc)
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call DMDAVecGetArrayF90(da_local,f_local,r,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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call DMDAVecGetArrayF90(da_local,x_local,x_scal,err_PETSc)
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call DMDAVecGetArrayReadF90(da_local,x_local,x_scal,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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ele = 0
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ele = 0
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r = 0.0_pREAL
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r = 0.0_pREAL
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@ -617,7 +606,7 @@ subroutine formResidual(da_local,x_local, &
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r(0:2,i+ii,j+jj,k+kk) = r(0:2,i+ii,j+jj,k+kk) + f_elem(ctr,1:3)
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r(0:2,i+ii,j+jj,k+kk) = r(0:2,i+ii,j+jj,k+kk) + f_elem(ctr,1:3)
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end do; end do; end do
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end do; end do; end do
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end do; end do; end do
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end do; end do; end do
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call DMDAVecRestoreArrayF90(da_local,x_local,x_scal,err_PETSc)
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call DMDAVecRestoreArrayReadF90(da_local,x_local,x_scal,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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@ -377,15 +377,15 @@ end subroutine grid_mechanical_spectral_basic_forward
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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!> @brief Update coordinates
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!> @brief Update coordinates
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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subroutine grid_mechanical_spectral_basic_updateCoords
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subroutine grid_mechanical_spectral_basic_updateCoords()
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PetscErrorCode :: err_PETSc
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PetscErrorCode :: err_PETSc
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real(pREAL), dimension(:,:,:,:), pointer :: F
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real(pREAL), dimension(:,:,:,:), pointer :: F
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call DMDAVecGetArrayF90(da,solution_vec,F,err_PETSc)
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call DMDAVecGetArrayReadF90(da,solution_vec,F,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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call utilities_updateCoords(F)
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call utilities_updateCoords(F)
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call DMDAVecRestoreArrayF90(da,solution_vec,F,err_PETSc)
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call DMDAVecRestoreArrayReadF90(da,solution_vec,F,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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end subroutine grid_mechanical_spectral_basic_updateCoords
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end subroutine grid_mechanical_spectral_basic_updateCoords
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@ -394,13 +394,13 @@ end subroutine grid_mechanical_spectral_basic_updateCoords
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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!> @brief Write current solver and constitutive data for restart to file
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!> @brief Write current solver and constitutive data for restart to file
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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subroutine grid_mechanical_spectral_basic_restartWrite
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subroutine grid_mechanical_spectral_basic_restartWrite()
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PetscErrorCode :: err_PETSc
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PetscErrorCode :: err_PETSc
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integer(HID_T) :: fileHandle, groupHandle
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integer(HID_T) :: fileHandle, groupHandle
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real(pREAL), dimension(:,:,:,:), pointer :: F
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real(pREAL), dimension(:,:,:,:), pointer :: F
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call DMDAVecGetArrayF90(da,solution_vec,F,err_PETSc)
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call DMDAVecGetArrayReadF90(da,solution_vec,F,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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if (num%update_gamma) C_minMaxAvgRestart = C_minMaxAvg
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if (num%update_gamma) C_minMaxAvgRestart = C_minMaxAvg
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@ -428,7 +428,7 @@ subroutine grid_mechanical_spectral_basic_restartWrite
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call HDF5_closeFile(fileHandle)
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call HDF5_closeFile(fileHandle)
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end if
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end if
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call DMDAVecRestoreArrayF90(da,solution_vec,F,err_PETSc)
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call DMDAVecRestoreArrayReadF90(da,solution_vec,F,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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end subroutine grid_mechanical_spectral_basic_restartWrite
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end subroutine grid_mechanical_spectral_basic_restartWrite
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@ -434,15 +434,15 @@ end subroutine grid_mechanical_spectral_polarisation_forward
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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!> @brief Update coordinates
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!> @brief Update coordinates
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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subroutine grid_mechanical_spectral_polarisation_updateCoords
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subroutine grid_mechanical_spectral_polarisation_updateCoords()
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PetscErrorCode :: err_PETSc
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PetscErrorCode :: err_PETSc
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real(pREAL), dimension(:,:,:,:), pointer :: FandF_tau
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real(pREAL), dimension(:,:,:,:), pointer :: FandF_tau
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call DMDAVecGetArrayF90(da,solution_vec,FandF_tau,err_PETSc)
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call DMDAVecGetArrayReadF90(da,solution_vec,FandF_tau,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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call utilities_updateCoords(FandF_tau(0:8,:,:,:))
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call utilities_updateCoords(FandF_tau(0:8,:,:,:))
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call DMDAVecRestoreArrayF90(da,solution_vec,FandF_tau,err_PETSc)
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call DMDAVecRestoreArrayReadF90(da,solution_vec,FandF_tau,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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end subroutine grid_mechanical_spectral_polarisation_updateCoords
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end subroutine grid_mechanical_spectral_polarisation_updateCoords
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@ -451,13 +451,13 @@ end subroutine grid_mechanical_spectral_polarisation_updateCoords
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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!> @brief Write current solver and constitutive data for restart to file
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!> @brief Write current solver and constitutive data for restart to file
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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subroutine grid_mechanical_spectral_polarisation_restartWrite
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subroutine grid_mechanical_spectral_polarisation_restartWrite()
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PetscErrorCode :: err_PETSc
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PetscErrorCode :: err_PETSc
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integer(HID_T) :: fileHandle, groupHandle
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integer(HID_T) :: fileHandle, groupHandle
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real(pREAL), dimension(:,:,:,:), pointer :: FandF_tau, F, F_tau
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real(pREAL), dimension(:,:,:,:), pointer :: FandF_tau, F, F_tau
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call DMDAVecGetArrayF90(da,solution_vec,FandF_tau,err_PETSc)
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call DMDAVecGetArrayReadF90(da,solution_vec,FandF_tau,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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F => FandF_tau(0: 8,:,:,:)
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F => FandF_tau(0: 8,:,:,:)
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F_tau => FandF_tau(9:17,:,:,:)
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F_tau => FandF_tau(9:17,:,:,:)
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@ -489,7 +489,7 @@ subroutine grid_mechanical_spectral_polarisation_restartWrite
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call HDF5_closeFile(fileHandle)
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call HDF5_closeFile(fileHandle)
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end if
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end if
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call DMDAVecRestoreArrayF90(da,solution_vec,FandF_tau,err_PETSc)
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call DMDAVecRestoreArrayReadF90(da,solution_vec,FandF_tau,err_PETSc)
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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end subroutine grid_mechanical_spectral_polarisation_restartWrite
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end subroutine grid_mechanical_spectral_polarisation_restartWrite
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@ -285,7 +285,7 @@ end subroutine grid_thermal_spectral_forward
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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!> @brief Write current solver and constitutive data for restart to file.
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!> @brief Write current solver and constitutive data for restart to file.
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!--------------------------------------------------------------------------------------------------
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!--------------------------------------------------------------------------------------------------
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subroutine grid_thermal_spectral_restartWrite
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subroutine grid_thermal_spectral_restartWrite()
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PetscErrorCode :: err_PETSc
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PetscErrorCode :: err_PETSc
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DM :: dm_local
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DM :: dm_local
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@ -294,7 +294,7 @@ subroutine grid_thermal_spectral_restartWrite
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call SNESGetDM(SNES_thermal,dm_local,err_PETSc);
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call SNESGetDM(SNES_thermal,dm_local,err_PETSc);
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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call DMDAVecGetArrayF90(dm_local,solution_vec,T,err_PETSc);
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call DMDAVecGetArrayReadF90(dm_local,solution_vec,T,err_PETSc);
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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print'(1x,a)', 'saving thermal solver data required for restart'; flush(IO_STDOUT)
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print'(1x,a)', 'saving thermal solver data required for restart'; flush(IO_STDOUT)
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@ -307,7 +307,7 @@ subroutine grid_thermal_spectral_restartWrite
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call HDF5_closeGroup(groupHandle)
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call HDF5_closeGroup(groupHandle)
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call HDF5_closeFile(fileHandle)
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call HDF5_closeFile(fileHandle)
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call DMDAVecRestoreArrayF90(dm_local,solution_vec,T,err_PETSc);
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call DMDAVecRestoreArrayReadF90(dm_local,solution_vec,T,err_PETSc);
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CHKERRQ(err_PETSc)
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CHKERRQ(err_PETSc)
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end subroutine grid_thermal_spectral_restartWrite
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end subroutine grid_thermal_spectral_restartWrite
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