specify which surface(s) you want to tag
This commit is contained in:
Pratheek Shanthraj
parent
84df61d4a0
commit
975e42b132
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@ -2,10 +2,9 @@
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# -*- coding: UTF-8 no BOM -*-
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import os,sys,string
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import numpy as np
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from optparse import OptionParser
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import damask
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import re
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from optparse import OptionParser
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scriptID = '$Id$'
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scriptName = scriptID.split()[1]
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@ -26,30 +25,27 @@ def func(seq):
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parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [file[s]]', description = """
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Recognize bounding surfaces and append them as physical sufaces in the geo file. """, version = scriptID)
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parser.add_option('-n','--numvol', dest = 'N', \
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type='int',\
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metavar='int',\
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help='number of physical volumes' )
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(options, filename) = parser.parse_args()
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parser.add_option('-n','--numvol', dest = 'N', \
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type='int',\
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metavar='int',\
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help='number of physical volumes' )
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parser.add_option('-s','--surfaces', dest = 'surfaces', \
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action = 'extend', \
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type = 'string', \
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metavar = '<string LIST>', \
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help = 'surfaces to tag (x, y, and/or z)')
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print 'options',options
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print 'filename',filename
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print options.N, type(options.N)
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print filename
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(options, filename) = parser.parse_args()
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my_geofile = filename[0]
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numVol = options.N
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PointCount = 0
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LineCount = 0
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LineLoopCount = 0
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PlaneSurfaceCount = 0
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SurfaceLoopCount = 0
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PointCount = 0
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LineCount = 0
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LineLoopCount = 0
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point = []
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line = []
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lineloop = []
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plane = []
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surface = []
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f = open(my_geofile,'r')
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lines = f.readlines()
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@ -63,7 +59,6 @@ for eachline in lines:
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a = m.group(1)
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point.append(list(func(a.split(","))))
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elif eachline.startswith('Line (', 0, 6):
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LineCount += 1
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r = re.compile('{(.*?)}')
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@ -80,30 +75,13 @@ for eachline in lines:
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a = m.group(1)
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lineloop.append(list(func(a.split(","))))
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elif eachline.startswith('Plane', 0, len(eachline)):
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PlaneSurfaceCount += 1
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r = re.compile('{(.*?)}')
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m = r.search(eachline)
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if m:
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a = m.group(1)
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plane.append(list(func(a.split(","))))
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elif eachline.startswith('Surface', 0,len(eachline)):
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SurfaceLoopCount += 1
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r = re.compile('{(.*?)}')
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m = r.search(eachline)
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if m:
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a = m.group(1)
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surface.append(list(func(a.split(","))))
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x_coord = []
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y_coord = []
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z_coord = []
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xp = []
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xm = []
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yp = []
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ym = []
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zp = []
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zm = []
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x_coord = []; y_coord = []; z_coord = []
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xp = []; xm = []
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yp = []; ym = []
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zp = []; zm = []
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xmin = min([x[0] for x in point]); xmax = max([x[0] for x in point])
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ymin = min([x[1] for x in point]); ymax = max([x[1] for x in point])
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zmin = min([x[2] for x in point]); zmax = max([x[2] for x in point])
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for i,l in enumerate(lineloop):
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for lines in l:
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@ -111,69 +89,37 @@ for i,l in enumerate(lineloop):
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x_coord.append(point[int(pts)-1][0])
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y_coord.append(point[int(pts)-1][1])
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z_coord.append(point[int(pts)-1][2])
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if all_same(x_coord,1.):
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if all_same(x_coord,xmax) and any([surface == 'x' for surface in options.surfaces]):
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xp.append(int(i+1))
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elif all_same(x_coord,0.):
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elif all_same(x_coord,xmin) and any([surface == 'x' for surface in options.surfaces]):
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xm.append(int(i+1))
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elif all_same(y_coord,1.):
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elif all_same(y_coord,ymax) and any([surface == 'y' for surface in options.surfaces]):
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yp.append(int(i+1))
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elif all_same(y_coord,0.):
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elif all_same(y_coord,ymin) and any([surface == 'y' for surface in options.surfaces]):
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ym.append(int(i+1))
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elif all_same(z_coord,1.):
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elif all_same(z_coord,zmax) and any([surface == 'z' for surface in options.surfaces]):
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zp.append(int(i+1))
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elif all_same(z_coord,0.):
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elif all_same(z_coord,zmin) and any([surface == 'z' for surface in options.surfaces]):
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zm.append(int(i+1))
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x_coord = []
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y_coord = []
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z_coord = []
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print 'suraces on x + are ', xp
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print 'suraces on x - are ', xm
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print 'suraces on y + are ', yp
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print 'suraces on y - are ', ym
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print 'suraces on z + are ', zp
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print 'suraces on z - are ', zm
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with open(my_geofile,'a') as f:
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f.write('Delete Physicals; \n')
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f.write('%s%d' %('Physical Surface(1) = {',xp[0]))
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for i in range(len(xp)-1):
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f.write('%s%d' %(',', xp[i+1]))
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f.write('%s\n' %'};')
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if any([surface == 'x' for surface in options.surfaces]):
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f.write('%s%s%s\n' %('Physical Surface(1) = {',','.join(map(str, xp)),'};'))
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f.write('%s%s%s\n' %('Physical Surface(2) = {',','.join(map(str, xm)),'};'))
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f.write('%s%d' %('Physical Surface(2) = {',xm[0]))
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for i in range(len(xm)-1):
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f.write('%s%d' %(',', xm[i+1]))
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f.write('%s\n' %'};')
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if any([surface == 'y' for surface in options.surfaces]):
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f.write('%s%s%s\n' %('Physical Surface(3) = {',','.join(map(str, yp)),'};'))
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f.write('%s%s%s\n' %('Physical Surface(4) = {',','.join(map(str, ym)),'};'))
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f.write('%s%d' %('Physical Surface(3) = {',yp[0]))
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for i in range(len(yp)-1):
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f.write('%s%d' %(',', yp[i+1]))
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f.write('%s\n' %'};')
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f.write('%s%d' %('Physical Surface(4) = {',ym[0]))
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for i in range(len(ym)-1):
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f.write('%s%d' %(',', ym[i+1]))
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f.write('%s\n' %'};')
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f.write('%s%d' %('Physical Surface(5) = {',zp[0]))
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for i in range(len(zp)-1):
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f.write('%s%d' %(',', zp[i+1]))
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f.write('%s\n' %'};')
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f.write('%s%d' %('Physical Surface(6) = {',zm[0]))
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for i in range(len(zm)-1):
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f.write('%s%d' %(',', zm[i+1]))
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f.write('%s\n' %'};')
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if any([surface == 'z' for surface in options.surfaces]):
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f.write('%s%s%s\n' %('Physical Surface(5) = {',','.join(map(str, zp)),'};'))
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f.write('%s%s%s\n' %('Physical Surface(6) = {',','.join(map(str, zm)),'};'))
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for i in range(numVol):
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f.write('%s%d%s%d%s\n' %('Physical Volume (', i+1,') = {',i+1,'};'))
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f.close()
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