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@ -197,10 +197,41 @@ class GeomGrid:
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@staticmethod
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@staticmethod
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def load(fname: Union[str, Path]) -> 'GeomGrid':
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def _load(fname: Union[str, Path],label) -> 'GeomGrid':
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"""
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"""
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Load from VTK ImageData file.
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Load from VTK ImageData file.
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Parameters
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----------
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fname : str or pathlib.Path
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VTK ImageData file to read.
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Valid extension is .vti, which will be appended if not given.
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label : str
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Label of the dataset containing the material IDs.
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Returns
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-------
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loaded : damask.GeomGrid
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GeomGrid-based geometry from file.
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"""
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v = VTK.load(fname if str(fname).endswith('.vti') else str(fname)+'.vti')
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cells = np.array(v.vtk_data.GetDimensions())-1
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bbox = np.array(v.vtk_data.GetBounds()).reshape(3,2).T
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ic = {label:v.get(l).reshape(cells,order='F') for l in set(v.labels['Cell Data']) - {label}}
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return GeomGrid(material = v.get(label).reshape(cells,order='F'),
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size = bbox[1] - bbox[0],
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origin = bbox[0],
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initial_conditions = ic,
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comments = v.comments,
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)
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@staticmethod
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def load(fname: Union[str, Path]) -> 'GeomGrid':
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"""
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Load from VTK ImageData file with material IDs stored as 'material'.
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Parameters
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Parameters
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----------
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----------
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fname : str or pathlib.Path
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fname : str or pathlib.Path
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@ -213,17 +244,32 @@ class GeomGrid:
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GeomGrid-based geometry from file.
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GeomGrid-based geometry from file.
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"""
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"""
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v = VTK.load(fname if str(fname).endswith('.vti') else str(fname)+'.vti')
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return GeomGrid._load(fname,'material')
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cells = np.array(v.vtk_data.GetDimensions())-1
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bbox = np.array(v.vtk_data.GetBounds()).reshape(3,2).T
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ic = {label:v.get(label).reshape(cells,order='F') for label in set(v.labels['Cell Data']) - {'material'}}
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return GeomGrid(material = v.get('material').reshape(cells,order='F'),
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size = bbox[1] - bbox[0],
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@staticmethod
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origin = bbox[0],
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def load_SPPARKS(fname: Union[str, Path]) -> 'GeomGrid':
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initial_conditions = ic,
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"""
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comments = v.comments,
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Load from SPPARKs VTK dump.
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)
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Parameters
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----------
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fname : str or pathlib.Path
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SPPARKS VTK dump file to read.
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Valid extension is .vti, which will be appended if not given.
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Returns
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-------
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loaded : damask.GeomGrid
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GeomGrid-based geometry from file.
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Notes
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-----
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A SPPARKs VTI dump is equivalent to a DAMASK VTI file
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where 'material' is renamed to 'spins'.
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"""
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return GeomGrid._load(fname,'spins')
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@typing.no_type_check
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@typing.no_type_check
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File diff suppressed because one or more lines are too long
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@ -92,6 +92,12 @@ class TestGeomGrid:
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default.material -= 1
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default.material -= 1
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assert GeomGrid.load_ASCII(tmp_path/'ASCII') == default
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assert GeomGrid.load_ASCII(tmp_path/'ASCII') == default
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def test_save_load_SPPARKS(self,res_path,tmp_path):
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v = VTK.load(res_path/'SPPARKS_dump.vti')
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v.set('material',v.get('spins')).save(tmp_path/'SPPARKS_dump.vti',parallel=False)
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assert np.all(GeomGrid.load_SPPARKS(res_path/'SPPARKS_dump.vti').material == \
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GeomGrid.load(tmp_path/'SPPARKS_dump.vti').material)
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def test_invalid_origin(self,default):
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def test_invalid_origin(self,default):
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with pytest.raises(ValueError):
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with pytest.raises(ValueError):
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GeomGrid(default.material[1:,1:,1:],
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GeomGrid(default.material[1:,1:,1:],
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