223031012
/
DAMASK_EICMD
mirror of https://github.com/achalhp/DAMASK_EICMD.git
1
0
Fork 0
Code Issues Projects Releases Wiki Activity

simplifying tests

This commit is contained in:
Martin Diehl 2023-12-05 07:14:14 +01:00
parent 1995934371
commit 8e5f5cc124
4 changed files with 38 additions and 32 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

BIN
python/tests/resources/Result/2phase_irregularGrid_tensionX_2phase_irregularGrid.material.hdf5 vendored
View File

Binary file not shown.

0
python/tests/resources/Result/2phase_irregularGrid_tensionX_increment_0.dream3d → python/tests/resources/Result/2phase_irregularGrid_tensionX_inc000.dream3d vendored
View File

BIN
python/tests/resources/Result/2phase_irregularGrid_tensionX_increment_40.dream3d vendored
View File

Binary file not shown.

70
python/tests/test_Result.py
View File

@ -58,6 +58,19 @@ def dict_equal(d1, d2):
return False
return True
@pytest.fixture
def h5py_dataset_iterator():
"""Iterate over all datasets in an HDF5 file."""
def _h5py_dataset_iterator(g, prefix=''):
for key,item in g.items():
path = os.path.join(prefix, key)
if isinstance(item, h5py.Dataset): # test for dataset
yield (path, item)
elif isinstance(item, h5py.Group): # test for group (go down)
yield from _h5py_dataset_iterator(item, path)
return _h5py_dataset_iterator
class TestResult:
def test_self_report(self,default):
@ -437,19 +450,12 @@ class TestResult:
single_phase.export_VTK(mode='point',target_dir=export_dir,parallel=False)
assert set(os.listdir(export_dir)) == set([f'{single_phase.fname.stem}_inc{i:02}.vtp' for i in range(0,40+1,4)])
@pytest.mark.parametrize('fname',['2phase_irregularGrid_tensionX.hdf5'],ids=range(1))
def test_export_DREAM3D(self,tmp_path,res_path,fname):
result = Result(res_path/fname).view(increments=0) #comparing the initial data only
prefix_inc = 'increment_'
N_digits = int(np.floor(np.log10(max(1,result.incs[-1]))))+1
inc = result.increments[0]
def test_export_DREAM3D(self,tmp_path,res_path):
result = Result(res_path/'2phase_irregularGrid_tensionX.hdf5').view(increments=0) #comparing the initial data only
result.export_DREAM3D(target_dir=tmp_path)
ref_file = h5py.File(res_path/'2phase_irregularGrid.dream3d','r')
job_file_no_ext = result.fname.stem
results_file = h5py.File(tmp_path/f'{job_file_no_ext}_inc{inc.split(prefix_inc)[-1].zfill(N_digits)}.dream3d','r')
ref = h5py.File(res_path/'2phase_irregularGrid.dream3d','r')
cur = h5py.File(tmp_path/f'2phase_irregularGrid_tensionX_inc000.dream3d','r')
error_messages = []
@ -459,40 +465,40 @@ class TestResult:
geom_label = data_container_label + '/_SIMPL_GEOMETRY'
# check phase array
results_phase = np.array(results_file[cell_data_label + '/Phases'])
ref_phase = np.array(ref_file[cell_data_label + '/Phases'])
results_phase = np.array(cur[cell_data_label + '/Phases'])
ref_phase = np.array(ref[cell_data_label + '/Phases'])
if not np.array_equal(results_phase,ref_phase):
error_messages.append('Phase array does not match')
# check euler angles
results_eulers = np.array(results_file[cell_data_label + '/EulerAngles'])
ref_eulers = np.array(ref_file[cell_data_label + '/EulerAngles'])
results_eulers = np.array(cur[cell_data_label + '/EulerAngles'])
ref_eulers = np.array(ref[cell_data_label + '/EulerAngles'])
if not np.allclose(results_eulers,ref_eulers,atol=1E-06):
error_messages.append('Euler angles array does not match')
# check CellData group attributes
for attrs in ['AttributeMatrixType','TupleDimensions']:
ref_val = ref_file[cell_data_label].attrs[attrs]
actual_val = results_file[cell_data_label].attrs[attrs]
ref_val = ref[cell_data_label].attrs[attrs]
actual_val = cur[cell_data_label].attrs[attrs]
if not np.array_equal(ref_val,actual_val):
error_messages.append("Cell Data attributes do not match")
# Common Attributes for datasets in CellData
for dataset in ['/Phases','/EulerAngles']:
for attrs in ['DataArrayVersion','Tuple Axis Dimensions','ComponentDimensions','ObjectType','TupleDimensions']:
ref_val = ref_file[cell_data_label + '/' + dataset].attrs[attrs]
actual_val = results_file[cell_data_label + '/' + dataset].attrs[attrs]
ref_val = ref[cell_data_label + '/' + dataset].attrs[attrs]
actual_val = cur[cell_data_label + '/' + dataset].attrs[attrs]
if not np.array_equal(ref_val,actual_val):
error_messages.append("Common attributes in datasets of CellData do not match")
# check crystal structure array
results_crystal_structure = np.array(results_file[ensemble_label + '/CrystalStructures'])
ref_crystal_structure = np.array(ref_file[ensemble_label + '/CrystalStructures'])
results_crystal_structure = np.array(cur[ensemble_label + '/CrystalStructures'])
ref_crystal_structure = np.array(ref[ensemble_label + '/CrystalStructures'])
if not np.allclose(results_crystal_structure, ref_crystal_structure):
error_messages.append('Crystal structure does not match')
# check PhaseName array
results_phase_name = np.array(results_file[ensemble_label + '/PhaseName'])
results_phase_name = np.array(cur[ensemble_label + '/PhaseName'])
ref_phase_name = ['Unknown Phase Type']
ref_phase_name.extend(i for i in result.visible['phases'])
ref_phase_name = [bytes(i,encoding='utf-8') for i in ref_phase_name]
@ -501,8 +507,8 @@ class TestResult:
# check attributes ensemble matrix
for attrs in ['AttributeMatrixType','TupleDimensions']:
ref_val = ref_file[ensemble_label].attrs[attrs]
actual_val = results_file[ensemble_label].attrs[attrs]
ref_val = ref[ensemble_label].attrs[attrs]
actual_val = cur[ensemble_label].attrs[attrs]
if not np.array_equal(ref_val,actual_val):
error_messages.append("Attributes of CellEnsembleData do not match")
@ -510,28 +516,28 @@ class TestResult:
# in the reference file the dataset PhaseTypes is in another group, so the path is different
for dataset in ['CrystalStructures','PhaseTypes']:
for attrs in ['DataArrayVersion','Tuple Axis Dimensions','ComponentDimensions','ObjectType','TupleDimensions']:
ref_value = ref_file['DataContainers/StatsGeneratorDataContainer/CellEnsembleData/' + dataset].attrs[attrs]
actual_val = results_file[ensemble_label + '/' + dataset].attrs[attrs]
ref_value = ref['DataContainers/StatsGeneratorDataContainer/CellEnsembleData/' + dataset].attrs[attrs]
actual_val = cur[ensemble_label + '/' + dataset].attrs[attrs]
if not np.array_equal(ref_value,actual_val):
error_messages.append(f'Attributes of {dataset}s within CellEnsembleData do not match for this {attrs}')
for dataset in ['PhaseName']:
for attrs in ['DataArrayVersion','Tuple Axis Dimensions','ComponentDimensions','ObjectType','TupleDimensions']:
ref_value = ref_file['DataContainers/StatsGeneratorDataContainer/CellEnsembleData/' + dataset].attrs[attrs]
actual_val = results_file[ensemble_label + '/' + dataset].attrs[attrs]
ref_value = ref['DataContainers/StatsGeneratorDataContainer/CellEnsembleData/' + dataset].attrs[attrs]
actual_val = cur[ensemble_label + '/' + dataset].attrs[attrs]
if not np.array_equal(ref_value,actual_val):
error_messages.append(f'Attributes of {dataset}s within CellEnsembleData do not match for this {attrs}')
# check geometry data
for dataset in ['DIMENSIONS','ORIGIN','SPACING']:
results_val = np.array(results_file[geom_label + '/' + dataset])
ref_val = np.array(ref_file[geom_label + '/' + dataset])
results_val = np.array(cur[geom_label + '/' + dataset])
ref_val = np.array(ref[geom_label + '/' + dataset])
if not np.array_equal(ref_val,results_val):
error_messages.append(f'The {dataset} values are incorrect')
for attrs in ['GeometryName','GeometryTypeName','GeometryType','SpatialDimensionality','UnitDimensionality']:
ref_value = ref_file[geom_label].attrs[attrs]
actual_val = results_file[geom_label].attrs[attrs]
ref_value = ref[geom_label].attrs[attrs]
actual_val = cur[geom_label].attrs[attrs]
if not np.array_equal(ref_value,actual_val):
error_messages.append("Geometry attributes do not match")