python is more convenient
This commit is contained in:
Martin Diehl
parent
4860f9c9ce
commit
888e7028f9
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@ -0,0 +1,65 @@
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#!/usr/bin/env python3
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import os
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import glob
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import argparse
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from pathlib import Path
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import damask
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marc_version = float(damask.environment.options['MARC_VERSION'])
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msc_root = Path(damask.environment.options['MSC_ROOT'])
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damask_root = damask.environment.root_dir
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parser = argparse.ArgumentParser(
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description='Apply DAMASK modification to MSC.Marc/Mentat',
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epilog = f'MSC_ROOT={msc_root} and MARC_VERSION={marc_version} (from {damask_root}/env/CONFIG)')
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parser.add_argument('--editor', dest='editor', metavar='string', default='vi',
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help='Name of the editor for MSC.Mentat (executable)')
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def copy_and_replace(in_file,dst):
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with open(in_file) as f:
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content = f.read()
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content = content.replace('%INSTALLDIR%',str(damask_root/'bin'))
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content = content.replace('%VERSION%',str(marc_version).replace('.0',''))
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content = content.replace('%EDITOR%', parser.parse_args().editor)
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with open(dst/Path(in_file).name,'w') as f:
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f.write(content)
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print('adapting Marc tools...\n')
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src = damask_root/f'installation/mods_MarcMentat/{marc_version}/Marc_tools'
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dst = msc_root/f'marc{marc_version}/tools'
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for in_file in glob.glob(str(src/'*damask*')) + [str(src/'include_linux64')]:
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copy_and_replace(in_file,dst)
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print('adapting Mentat scripts and menus...\n')
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src = damask_root/f'installation/mods_MarcMentat/{marc_version}/Mentat_bin'
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dst = msc_root/f'mentat{marc_version}/bin'
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for in_file in glob.glob(str(src/'*[!.original]')):
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copy_and_replace(in_file,dst)
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src = damask_root/f'installation/mods_MarcMentat/{marc_version}/Mentat_menus'
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dst = msc_root/f'mentat{marc_version}/menus'
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for in_file in glob.glob(str(src/'job_run.ms')):
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copy_and_replace(in_file,dst)
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print('compiling Mentat menu binaries...')
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executable = str(msc_root/f'mentat{marc_version}/bin/mentat')
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menu_file = str(msc_root/f'mentat{marc_version}/menus/linux64/main.msb')
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os.system(f'xvfb-run {executable} -compile {menu_file}')
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print('setting file access rights...\n')
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for pattern in [msc_root/f'marc{marc_version}/tools/*damask*',
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msc_root/f'mentat{marc_version}/bin/submit?',
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msc_root/f'mentat{marc_version}/bin/kill?']:
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for f in glob.glob(str(pattern)):
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os.chmod(f,0o755)
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@ -1,144 +0,0 @@
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#!/usr/bin/env bash
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SCRIPTLOCATION="$( cd "$( dirname "$0" )" && pwd )"
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DAMASK_ROOT=$SCRIPTLOCATION/../../
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if [ "x$MSC_ROOT" != "x" ]; then
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DEFAULT_DIR=$MSC_ROOT
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fi
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if [ "x$MARC_VERSION" != "x" ]; then
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DEFAULT_VERSION=$MARC_VERSION
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fi
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if [ "x$DAMASK_BIN" != "x" ]; then
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BIN_DIR=$DAMASK_ROOT/bin
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fi
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while [ ! -d "$SCRIPTLOCATION/$VERSION" ] || [ -z "$VERSION" ]
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do
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echo "Input version of MARC/MENTAT installation: [${DEFAULT_VERSION}]"
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read VERSION
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if [ -z "$VERSION" ]; then
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VERSION=${DEFAULT_VERSION}
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fi
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[[ -d "$SCRIPTLOCATION/$VERSION" ]] || echo -e "$VERSION not supported..!\n"
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done
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echo "MSC version: $VERSION"
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while [ ! -d "$INSTALLDIR" ] || [ -z "$INSTALLDIR" ]
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do
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echo "Input path of MARC/MENTAT installation: [${DEFAULT_DIR}]"
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read INSTALLDIR
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if [ -z "$INSTALLDIR" ]; then
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INSTALLDIR=${DEFAULT_DIR}
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fi
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[[ -d "$INSTALLDIR" ]] || echo -e "$INSTALLDIR not found..!\n"
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done
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INSTALLDIR=${INSTALLDIR%/} # remove trailing slash
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echo "MSC installation path: $INSTALLDIR"
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DEFAULT_EDITOR='vi'
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EDITOR=''
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while [ -z "$EDITOR" ]
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do
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echo "Input command to invoke your preferred editor: [${DEFAULT_EDITOR}]"
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read EDITOR
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if [ -z "$EDITOR" ]; then
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EDITOR=${DEFAULT_EDITOR}
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fi
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done
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echo "Editor: $EDITOR"
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# tools
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echo ''
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echo 'adapting Marc tools...'
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theDIR=$INSTALLDIR/marc$VERSION/tools
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for filename in 'comp_damask_mp' \
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'comp_damask_lmp' \
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'comp_damask_hmp' \
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'run_damask_mp' \
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'run_damask_lmp' \
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'run_damask_hmp' \
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'include_linux64'; do
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cp $SCRIPTLOCATION/$VERSION/Marc_tools/$filename $theDIR
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echo $theDIR/$filename | xargs perl -pi -e "s:%INSTALLDIR%:${INSTALLDIR}:g"
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echo $theDIR/$filename | xargs perl -pi -e "s:%VERSION%:${VERSION}:g"
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echo $filename
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done
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# Mentat scripts
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echo ''
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echo 'adapting Mentat scripts...'
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theDIR=$INSTALLDIR/mentat$VERSION/bin
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for filename in 'edit_window' \
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'submit4' \
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'submit5' \
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'submit6' \
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'kill4' \
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'kill5' \
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'kill6'; do
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cp $SCRIPTLOCATION/$VERSION/Mentat_bin/$filename $theDIR
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echo $theDIR/$filename | xargs perl -pi -e "s:%INSTALLDIR%:${INSTALLDIR}:g"
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echo $theDIR/$filename | xargs perl -pi -e "s:%VERSION%:${VERSION}:g"
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echo $theDIR/$filename | xargs perl -pi -e "s:%EDITOR%:${EDITOR}:g"
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echo $filename
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done
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# Mentat scripts
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echo -e '\nadapting Mentat menus...'
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theDIR=$INSTALLDIR/mentat$VERSION/menus
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for filename in 'job_run.ms'; do
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cp $SCRIPTLOCATION/$VERSION/Mentat_menus/$filename $theDIR
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echo $theDIR/$filename | xargs perl -pi -e "s:%INSTALLDIR%:${INSTALLDIR}:g"
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echo $theDIR/$filename | xargs perl -pi -e "s:%VERSION%:${VERSION}:g"
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echo $filename
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done
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# compile menus
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echo ''
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echo 'compiling Mentat menu binaries...'
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$(which xvfb-run 2>/dev/null) $INSTALLDIR/mentat$VERSION/bin/mentat -compile $INSTALLDIR/mentat$VERSION/menus/linux64/main.msb
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[[ $? != 0 ]] && echo '...failed. Try installing xvfb-run on your system.'
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# setting access rights
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echo ''
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echo 'setting file access rights...'
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for filename in marc$VERSION/tools/run_damask* \
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marc$VERSION/tools/comp_damask* \
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mentat$VERSION/bin/submit{4..6} \
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mentat$VERSION/bin/kill{4..6} ; do
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chmod 755 $INSTALLDIR/${filename}
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done
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#creating symlinks for run_damask_scripts
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if [ -d "$BIN_DIR" ]; then
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echo ''
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echo "Do you want to create symlinks for run_damask scripts in ${BIN_DIR} [YES/no] ?"
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read YESNO
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if [ -z "$YESNO" ]; then
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YESNO=yes
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fi
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case $YESNO in
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y* | Y* )
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echo''
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echo 'creating symlinks ...'
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echo''
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theDIR=$INSTALLDIR/marc$VERSION/tools
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for filename in 'run_damask_mp' \
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'run_damask_lmp' \
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'run_damask_hmp'; do
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echo ${filename:4}$VERSION
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[ -f $BIN_DIR/${filename:4}$VERSION ] && rm $BIN_DIR/${filename:4}$VERSION
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ln -s $theDIR/$filename $BIN_DIR/${filename:4}$VERSION
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done
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;;
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esac
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fi
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# precompiling user subroutine
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echo ''
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echo 'precompiling $VERSION HYPELA2 user subroutine...'
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echo 'not yet implemented..!'
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echo -e '\ndone.'
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@ -11,7 +11,7 @@ The Intel Fortran compiler needs to be installed.
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1) Install Marc, Mentat and Documentation as usual
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Run the test example including subroutines to confirm that the installation of both Marc/Mentat and the Intel Fortran Compiler is ok!
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2) Run the apply_DAMASK_modifications.sh script from this directory.
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2) Run the apply_DAMASK_modifications.py script from this directory.
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APPENDIX:
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