split petsc_options into petsc_defaultOptions and petsc_options, so you only need to specify the petsc options you intend to overwrite or append to the default options
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@ -174,6 +174,7 @@ subroutine utilities_init()
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fftw_planner_flag, &
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fftw_timelimit, &
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memory_efficient, &
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petsc_defaultOptions, &
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petsc_options, &
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divergence_correction, &
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worldrank
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@ -238,6 +239,7 @@ subroutine utilities_init()
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flush(6)
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call PetscOptionsClear(ierr); CHKERRQ(ierr)
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if(debugPETSc) call PetscOptionsInsertString(trim(PETSCDEBUG),ierr); CHKERRQ(ierr)
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call PetscOptionsInsertString(trim(petsc_defaultOptions),ierr); CHKERRQ(ierr)
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call PetscOptionsInsertString(trim(petsc_options),ierr); CHKERRQ(ierr)
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grid1Red = gridLocal(1)/2_pInt + 1_pInt
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@ -115,9 +115,10 @@ module numerics
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spectral_solver = 'basicpetsc' , & !< spectral solution method
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spectral_filter = 'none' !< spectral filtering method
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character(len=1024), protected, public :: &
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petsc_options = '-mech_snes_type ngmres &
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petsc_defaultOptions = '-mech_snes_type ngmres &
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&-damage_snes_type ngmres &
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&-thermal_snes_type ngmres '
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&-thermal_snes_type ngmres ', &
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petsc_options = ''
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integer(pInt), protected, public :: &
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fftw_planner_flag = 32_pInt, & !< conversion of fftw_plan_mode to integer, basically what is usually done in the include file of fftw
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continueCalculation = 0_pInt, & !< 0: exit if BVP solver does not converge, 1: continue calculation if BVP solver does not converge
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@ -134,14 +135,14 @@ module numerics
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integrationOrder = 2_pInt, & !< order of quadrature rule required
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structOrder = 2_pInt, & !< order of displacement shape functions
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thermalOrder = 2_pInt, & !< order of temperature field shape functions
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damageOrder = 2_pInt, & !< order of damage field shape functions
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damageOrder = 1_pInt, & !< order of damage field shape functions
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vacancyfluxOrder = 2_pInt, & !< order of vacancy concentration and chemical potential field shape functions
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porosityOrder = 2_pInt, & !< order of porosity field shape functions
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porosityOrder = 1_pInt, & !< order of porosity field shape functions
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hydrogenfluxOrder = 2_pInt !< order of hydrogen concentration and chemical potential field shape functions
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logical, protected, public :: &
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BBarStabilisation = .false.
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character(len=4096), protected, public :: &
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petsc_optionsFEM = '-mech_snes_type newtonls &
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petsc_defaultOptions = '-mech_snes_type newtonls &
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&-mech_snes_linesearch_type cp &
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&-mech_snes_ksp_ew &
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&-mech_snes_ksp_ew_rtol0 0.01 &
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@ -152,12 +153,12 @@ module numerics
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&-mech_mg_levels_ksp_type chebyshev &
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&-mech_mg_levels_pc_type sor &
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&-mech_pc_ml_nullspace user &
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&-damage_snes_type newtonls &
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&-damage_snes_linesearch_type cp &
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&-damage_ksp_type fgmres &
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&-damage_ksp_max_it 25 &
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&-damage_snes_type vinewtonrsls &
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&-damage_snes_atol 1e-8 &
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&-damage_pc_type hypre &
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&-damage_ksp_type preonly &
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&-damage_ksp_max_it 25 &
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&-damage_pc_type cholesky &
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&-damage_pc_factor_mat_solver_package mumps &
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&-thermal_snes_type newtonls &
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&-thermal_snes_linesearch_type cp &
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&-thermal_ksp_type fgmres &
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@ -172,12 +173,12 @@ module numerics
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&-vacancy_pc_type ml &
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&-vacancy_mg_levels_ksp_type chebyshev &
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&-vacancy_mg_levels_pc_type sor &
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&-porosity_snes_type newtonls &
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&-porosity_snes_linesearch_type cp &
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&-porosity_ksp_type fgmres &
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&-porosity_ksp_max_it 25 &
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&-porosity_snes_type vinewtonrsls &
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&-porosity_snes_atol 1e-8 &
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&-porosity_pc_type hypre &
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&-porosity_ksp_type preonly &
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&-porosity_ksp_max_it 25 &
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&-porosity_pc_type cholesky &
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&-porosity_pc_factor_mat_solver_package mumps &
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&-hydrogen_snes_type newtonls &
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&-hydrogen_snes_linesearch_type cp &
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&-hydrogen_snes_atol 1e-9 &
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@ -185,7 +186,8 @@ module numerics
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&-hydrogen_ksp_max_it 25 &
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&-hydrogen_pc_type ml &
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&-hydrogen_mg_levels_ksp_type chebyshev &
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&-hydrogen_mg_levels_pc_type sor '
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&-hydrogen_mg_levels_pc_type sor ', &
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petsc_options = ''
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#endif
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public :: numerics_init
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@ -475,13 +477,13 @@ subroutine numerics_init
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porosityOrder = IO_intValue(line,positions,2_pInt)
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case ('hydrogenfluxorder')
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hydrogenfluxOrder = IO_intValue(line,positions,2_pInt)
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case ('petsc_optionsfem')
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petsc_optionsFEM = trim(line(positions(4):))
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case ('petsc_options')
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petsc_options = trim(line(positions(4):))
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case ('bbarstabilisation')
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BBarStabilisation = IO_intValue(line,positions,2_pInt) > 0_pInt
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#else
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case ('integrationorder','structorder','thermalorder', 'damageorder','vacancyfluxorder', &
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'porosityorder','hydrogenfluxorder','petsc_optionsfem','bbarstabilisation')
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'porosityorder','hydrogenfluxorder','bbarstabilisation')
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call IO_warning(40_pInt,ext_msg=tag)
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#endif
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case default ! found unknown keyword
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@ -626,7 +628,7 @@ subroutine numerics_init
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write(6,'(a24,1x,es8.1)') ' polarAlpha: ',polarAlpha
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write(6,'(a24,1x,es8.1)') ' polarBeta: ',polarBeta
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write(6,'(a24,1x,a)') ' spectral solver: ',trim(spectral_solver)
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write(6,'(a24,1x,a)') ' PETSc_options: ',trim(petsc_options)
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write(6,'(a24,1x,a)') ' PETSc_options: ',trim(petsc_defaultOptions)//' '//trim(petsc_options)
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#endif
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!--------------------------------------------------------------------------------------------------
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@ -639,7 +641,7 @@ subroutine numerics_init
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write(6,'(a24,1x,i8)') ' vacancyfluxOrder: ',vacancyfluxOrder
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write(6,'(a24,1x,i8)') ' porosityOrder: ',porosityOrder
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write(6,'(a24,1x,i8)') ' hydrogenfluxOrder: ',hydrogenfluxOrder
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write(6,'(a24,1x,a)') ' PETSc_optionsFEM: ',trim(petsc_optionsFEM)
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write(6,'(a24,1x,a)') ' PETSc_options: ',trim(petsc_defaultOptions)//' '//trim(petsc_options)
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write(6,'(a24,1x,L8)') ' B-Bar stabilisation: ',BBarStabilisation
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#endif
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endif mainProcess3
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@ -684,7 +686,7 @@ subroutine numerics_init
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if (maxVolDiscr_RGC <= 0.0_pReal) call IO_error(301_pInt,ext_msg='maxVolDiscr_RGC')
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if (volDiscrMod_RGC < 0.0_pReal) call IO_error(301_pInt,ext_msg='volDiscrMod_RGC')
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if (volDiscrPow_RGC <= 0.0_pReal) call IO_error(301_pInt,ext_msg='volDiscrPw_RGC')
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if (residualStiffness <= 0.0_pReal) call IO_error(301_pInt,ext_msg='residualStiffness')
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if (residualStiffness < 0.0_pReal) call IO_error(301_pInt,ext_msg='residualStiffness')
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if (itmax <= 1_pInt) call IO_error(301_pInt,ext_msg='itmax')
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if (itmin > itmax .or. itmin < 1_pInt) call IO_error(301_pInt,ext_msg='itmin')
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if (maxCutBack < 0_pInt) call IO_error(301_pInt,ext_msg='maxCutBack')
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