moved setup scripts back to subdirs where they are needed

code/setup/setup_code.py

@@ -10,7 +10,7 @@ architectures = {
                          }, 
                 }
 
-wd = os.path.join(os.path.dirname(sys.argv[0]),'../../code')
+wd = os.path.join(os.path.dirname(sys.argv[0]),'..')
 
 for arch in architectures:
 	me = architectures[arch]

processing/post/make_postprocessingMath

@@ -16,8 +16,9 @@ else
   wd=$1
 fi
 
-f2py -c --f90flags="-heap-arrays 500000000" \
+cd $wd
-$wd/postprocessingMath.pyf \
-$wd/postprocessingMath.f90 \
--L $wd/libfftw3.a
 
+f2py -c --f90flags="-heap-arrays 500000000" \
+postprocessingMath.pyf \
+postprocessingMath.f90 \
+-L libfftw3.a

processing/setup/setup_processing

@@ -43,7 +43,7 @@ execute = { \
 						}
 
 homedir = os.getenv('HOME')
-basedir = os.path.join(os.path.dirname(sys.argv[0]),'../../processing')
+basedir = os.path.join(os.path.dirname(sys.argv[0]),'..')
 for dir in bin_link:
   for file in bin_link[dir]:
     src = os.path.abspath(os.path.join(basedir,dir,file))
@@ -62,8 +62,8 @@ for dir in compile:
     if os.path.isfile(src):
       print file
       os.system('ifort -O3 -parallel -o%s %s'%(os.path.splitext(src)[0],src))
-
+ 
-modules = glob.glob(os.path.abspath(os.path.join(basedir,'*.mod')))
+modules = glob.glob('*.mod')
 for module in modules:
   print module
   os.remove(module)