phasing out python shell scripts

processing/pre/geom_rescale.py

@@ -55,20 +55,9 @@ for name in filenames:
              np.array([o*float(n.lower().replace('x','')) if n.lower().endswith('x') \
                   else float(n) for o,n in zip(size,options.size)],dtype=float)
 
-  damask.util.croak(geom.update(microstructure =
+  geom.scale(new_grid)
-                                ndimage.interpolation.zoom(
+  damask.util.croak(geom.update(microstructure = None,
-                                    geom.microstructure,
+                                size = new_size))
-                                    new_grid/grid,
-                                    output=geom.microstructure.dtype,
-                                    order=0,
-                                    mode='nearest',
-                                    prefilter=False,
-                                 ) if np.any(new_grid != grid) \
-                                 else None,
-                                 size = new_size))
   geom.add_comments(scriptID + ' ' + ' '.join(sys.argv[1:]))
 
-  if name is None:
+  geom.to_file(sys.stdout if name is None else name)
-    sys.stdout.write(str(geom.show()))
-  else:
-    geom.to_file(name)

python/damask/geom.py

@@ -467,6 +467,29 @@ class Geom():
         #self.add_comments('tbd')
 
 
+    def scale(self,grid):
+        """
+        Scale microstructure to new grid 
+
+        Parameters
+        ----------
+        grid : iterable of int
+            new grid dimension
+
+        """
+        return self.update(
+                           ndimage.interpolation.zoom(
+                                                      self.microstructure,
+                                                      grid/self.get_grid(),
+                                                      output=self.microstructure.dtype,
+                                                      order=0,
+                                                      mode='nearest',
+                                                      prefilter=False
+                                                     )
+                          )
+        #self.add_comments('tbd')
+
+
     def clean(self,stencil=3):
         """
         Smooth microstructure by selecting most frequent index within given stencil at each location.