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DAMASK_EICMD
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Merge branch 'development' into universal-error+warning-formatting

This commit is contained in:
Philip Eisenlohr 2023-07-12 09:31:37 -04:00
parent d9cf3983b4 61f1cdf70d
commit 7c875371a6
11 changed files with 67 additions and 50 deletions
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2
VERSION
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@ -1 +1 @@
3.0.0-alpha7-610-g716600299
3.0.0-alpha7-614-gad6220c26

2
src/Marc/discretization_Marc.f90
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@ -210,7 +210,7 @@ subroutine inputRead(elem,node0_elem,connectivity_elem,materialAt)
call result_openJobFile()
call result_writeDataset_str(IO_read(trim(getSolverJobName())//InputFileExtension), 'setup', &
call result_addSetupFile(IO_read(trim(getSolverJobName())//InputFileExtension), &
trim(getSolverJobName())//InputFileExtension, &
'MSC.Marc input deck')
call result_closeJobFile()

2
src/config.f90
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@ -121,7 +121,7 @@ function parse(fname,description)
print'(/,1x,a)', 'reading '//description; flush(IO_STDOUT)
fileContent = IO_read(fname)
call result_openJobFile(parallel=.false.)
call result_writeDataset_str(fileContent,'setup',fname(scan(fname,'/',.true.)+1:),description)
call result_addSetupFile(fileContent,fname,description)
call result_closeJobFile()
end if
call parallelization_bcast_str(fileContent)

2
src/grid/DAMASK_grid.f90
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@ -146,7 +146,7 @@ program DAMASK_grid
fname = CLI_loadFile
if (scan(fname,'/') /= 0) fname = fname(scan(fname,'/',.true.)+1:)
call result_openJobFile(parallel=.false.)
call result_writeDataset_str(fileContent,'setup',fname,'load case definition (grid solver)')
call result_addSetupFile(fileContent,fname,'load case definition (grid solver)')
call result_closeJobFile()
end if

2
src/grid/discretization_grid.f90
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@ -89,7 +89,7 @@ subroutine discretization_grid_init(restart)
fname = CLI_geomFile
if (scan(fname,'/') /= 0) fname = fname(scan(fname,'/',.true.)+1:)
call result_openJobFile(parallel=.false.)
call result_writeDataset_str(fileContent,'setup',fname,'geometry definition (grid solver)')
call result_addSetupFile(fileContent,fname,'geometry definition (grid solver)')
call result_closeJobFile()
else
allocate(materialAt_global(0)) ! needed for IntelMPI

6
src/grid/grid_damage_spectral.f90
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@ -307,7 +307,7 @@ end subroutine grid_damage_spectral_forward
!--------------------------------------------------------------------------------------------------
!> @brief Write current solver and constitutive data for restart to file.
!--------------------------------------------------------------------------------------------------
subroutine grid_damage_spectral_restartWrite
subroutine grid_damage_spectral_restartWrite()
PetscErrorCode :: err_PETSc
DM :: dm_local
@ -316,7 +316,7 @@ subroutine grid_damage_spectral_restartWrite
call SNESGetDM(SNES_damage,dm_local,err_PETSc);
CHKERRQ(err_PETSc)
call DMDAVecGetArrayF90(dm_local,solution_vec,phi,err_PETSc);
call DMDAVecGetArrayReadF90(dm_local,solution_vec,phi,err_PETSc);
CHKERRQ(err_PETSc)
print'(1x,a)', 'saving damage solver data required for restart'; flush(IO_STDOUT)
@ -328,7 +328,7 @@ subroutine grid_damage_spectral_restartWrite
call HDF5_closeGroup(groupHandle)
call HDF5_closeFile(fileHandle)
call DMDAVecRestoreArrayF90(dm_local,solution_vec,phi,err_PETSc);
call DMDAVecRestoreArrayReadF90(dm_local,solution_vec,phi,err_PETSc);
CHKERRQ(err_PETSc)
end subroutine grid_damage_spectral_restartWrite

31
src/grid/grid_mech_FEM.f90
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@ -351,15 +351,8 @@ subroutine grid_mechanical_FEM_forward(cutBack,guess,Delta_t,Delta_t_old,t_remai
rotation_BC
PetscErrorCode :: err_PETSc
PetscScalar, pointer, dimension(:,:,:,:) :: &
u,u_lastInc
call DMDAVecGetArrayF90(mechanical_grid,solution_current,u,err_PETSc)
CHKERRQ(err_PETSc)
call DMDAVecGetArrayF90(mechanical_grid,solution_lastInc,u_lastInc,err_PETSc)
CHKERRQ(err_PETSc)
if (cutBack) then
C_volAvg = C_volAvgLastInc
else
@ -408,10 +401,6 @@ subroutine grid_mechanical_FEM_forward(cutBack,guess,Delta_t,Delta_t_old,t_remai
call VecAXPY(solution_current,Delta_t,solution_rate,err_PETSc)
CHKERRQ(err_PETSc)
call DMDAVecRestoreArrayF90(mechanical_grid,solution_current,u,err_PETSc)
CHKERRQ(err_PETSc)
call DMDAVecRestoreArrayF90(mechanical_grid,solution_lastInc,u_lastInc,err_PETSc)
CHKERRQ(err_PETSc)
!--------------------------------------------------------------------------------------------------
! set module wide available data
@ -425,7 +414,7 @@ end subroutine grid_mechanical_FEM_forward
!--------------------------------------------------------------------------------------------------
!> @brief Update coordinates
!--------------------------------------------------------------------------------------------------
subroutine grid_mechanical_FEM_updateCoords
subroutine grid_mechanical_FEM_updateCoords()
call utilities_updateCoords(F)
@ -435,16 +424,16 @@ end subroutine grid_mechanical_FEM_updateCoords
!--------------------------------------------------------------------------------------------------
!> @brief Write current solver and constitutive data for restart to file
!--------------------------------------------------------------------------------------------------
subroutine grid_mechanical_FEM_restartWrite
subroutine grid_mechanical_FEM_restartWrite()
PetscErrorCode :: err_PETSc
integer(HID_T) :: fileHandle, groupHandle
PetscScalar, dimension(:,:,:,:), pointer :: u,u_lastInc
call DMDAVecGetArrayF90(mechanical_grid,solution_current,u,err_PETSc)
call DMDAVecGetArrayReadF90(mechanical_grid,solution_current,u,err_PETSc)
CHKERRQ(err_PETSc)
call DMDAVecGetArrayF90(mechanical_grid,solution_lastInc,u_lastInc,err_PETSc)
call DMDAVecGetArrayReadF90(mechanical_grid,solution_lastInc,u_lastInc,err_PETSc)
CHKERRQ(err_PETSc)
print'(1x,a)', 'saving solver data required for restart'; flush(IO_STDOUT)
@ -471,9 +460,9 @@ subroutine grid_mechanical_FEM_restartWrite
call HDF5_closeFile(fileHandle)
end if
call DMDAVecRestoreArrayF90(mechanical_grid,solution_current,u,err_PETSc)
call DMDAVecRestoreArrayReadF90(mechanical_grid,solution_current,u,err_PETSc)
CHKERRQ(err_PETSc)
call DMDAVecRestoreArrayF90(mechanical_grid,solution_lastInc,u_lastInc,err_PETSc)
call DMDAVecRestoreArrayReadF90(mechanical_grid,solution_lastInc,u_lastInc,err_PETSc)
CHKERRQ(err_PETSc)
end subroutine grid_mechanical_FEM_restartWrite
@ -566,7 +555,7 @@ subroutine formResidual(da_local,x_local, &
!--------------------------------------------------------------------------------------------------
! get deformation gradient
call DMDAVecGetArrayF90(da_local,x_local,x_scal,err_PETSc)
call DMDAVecGetArrayReadF90(da_local,x_local,x_scal,err_PETSc)
CHKERRQ(err_PETSc)
do k = cells3Offset+1, cells3Offset+cells3; do j = 1, cells(2); do i = 1, cells(1)
ctr = 0
@ -576,7 +565,7 @@ subroutine formResidual(da_local,x_local, &
end do; end do; end do
F(1:3,1:3,i,j,k-cells3Offset) = params%rotation_BC%rotate(F_aim,active=.true.) + transpose(matmul(BMat,x_elem))
end do; end do; end do
call DMDAVecRestoreArrayF90(da_local,x_local,x_scal,err_PETSc)
call DMDAVecRestoreArrayReadF90(da_local,x_local,x_scal,err_PETSc)
CHKERRQ(err_PETSc)
!--------------------------------------------------------------------------------------------------
@ -596,7 +585,7 @@ subroutine formResidual(da_local,x_local, &
! constructing residual
call DMDAVecGetArrayF90(da_local,f_local,r,err_PETSc)
CHKERRQ(err_PETSc)
call DMDAVecGetArrayF90(da_local,x_local,x_scal,err_PETSc)
call DMDAVecGetArrayReadF90(da_local,x_local,x_scal,err_PETSc)
CHKERRQ(err_PETSc)
ele = 0
r = 0.0_pREAL
@ -617,7 +606,7 @@ subroutine formResidual(da_local,x_local, &
r(0:2,i+ii,j+jj,k+kk) = r(0:2,i+ii,j+jj,k+kk) + f_elem(ctr,1:3)
end do; end do; end do
end do; end do; end do
call DMDAVecRestoreArrayF90(da_local,x_local,x_scal,err_PETSc)
call DMDAVecRestoreArrayReadF90(da_local,x_local,x_scal,err_PETSc)
CHKERRQ(err_PETSc)
!--------------------------------------------------------------------------------------------------

12
src/grid/grid_mech_spectral_basic.f90
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@ -377,15 +377,15 @@ end subroutine grid_mechanical_spectral_basic_forward
!--------------------------------------------------------------------------------------------------
!> @brief Update coordinates
!--------------------------------------------------------------------------------------------------
subroutine grid_mechanical_spectral_basic_updateCoords
subroutine grid_mechanical_spectral_basic_updateCoords()
PetscErrorCode :: err_PETSc
real(pREAL), dimension(:,:,:,:), pointer :: F
call DMDAVecGetArrayF90(da,solution_vec,F,err_PETSc)
call DMDAVecGetArrayReadF90(da,solution_vec,F,err_PETSc)
CHKERRQ(err_PETSc)
call utilities_updateCoords(F)
call DMDAVecRestoreArrayF90(da,solution_vec,F,err_PETSc)
call DMDAVecRestoreArrayReadF90(da,solution_vec,F,err_PETSc)
CHKERRQ(err_PETSc)
end subroutine grid_mechanical_spectral_basic_updateCoords
@ -394,13 +394,13 @@ end subroutine grid_mechanical_spectral_basic_updateCoords
!--------------------------------------------------------------------------------------------------
!> @brief Write current solver and constitutive data for restart to file
!--------------------------------------------------------------------------------------------------
subroutine grid_mechanical_spectral_basic_restartWrite
subroutine grid_mechanical_spectral_basic_restartWrite()
PetscErrorCode :: err_PETSc
integer(HID_T) :: fileHandle, groupHandle
real(pREAL), dimension(:,:,:,:), pointer :: F
call DMDAVecGetArrayF90(da,solution_vec,F,err_PETSc)
call DMDAVecGetArrayReadF90(da,solution_vec,F,err_PETSc)
CHKERRQ(err_PETSc)
if (num%update_gamma) C_minMaxAvgRestart = C_minMaxAvg
@ -428,7 +428,7 @@ subroutine grid_mechanical_spectral_basic_restartWrite
call HDF5_closeFile(fileHandle)
end if
call DMDAVecRestoreArrayF90(da,solution_vec,F,err_PETSc)
call DMDAVecRestoreArrayReadF90(da,solution_vec,F,err_PETSc)
CHKERRQ(err_PETSc)
end subroutine grid_mechanical_spectral_basic_restartWrite

12
src/grid/grid_mech_spectral_polarisation.f90
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@ -434,15 +434,15 @@ end subroutine grid_mechanical_spectral_polarisation_forward
!--------------------------------------------------------------------------------------------------
!> @brief Update coordinates
!--------------------------------------------------------------------------------------------------
subroutine grid_mechanical_spectral_polarisation_updateCoords
subroutine grid_mechanical_spectral_polarisation_updateCoords()
PetscErrorCode :: err_PETSc
real(pREAL), dimension(:,:,:,:), pointer :: FandF_tau
call DMDAVecGetArrayF90(da,solution_vec,FandF_tau,err_PETSc)
call DMDAVecGetArrayReadF90(da,solution_vec,FandF_tau,err_PETSc)
CHKERRQ(err_PETSc)
call utilities_updateCoords(FandF_tau(0:8,:,:,:))
call DMDAVecRestoreArrayF90(da,solution_vec,FandF_tau,err_PETSc)
call DMDAVecRestoreArrayReadF90(da,solution_vec,FandF_tau,err_PETSc)
CHKERRQ(err_PETSc)
end subroutine grid_mechanical_spectral_polarisation_updateCoords
@ -451,13 +451,13 @@ end subroutine grid_mechanical_spectral_polarisation_updateCoords
!--------------------------------------------------------------------------------------------------
!> @brief Write current solver and constitutive data for restart to file
!--------------------------------------------------------------------------------------------------
subroutine grid_mechanical_spectral_polarisation_restartWrite
subroutine grid_mechanical_spectral_polarisation_restartWrite()
PetscErrorCode :: err_PETSc
integer(HID_T) :: fileHandle, groupHandle
real(pREAL), dimension(:,:,:,:), pointer :: FandF_tau, F, F_tau
call DMDAVecGetArrayF90(da,solution_vec,FandF_tau,err_PETSc)
call DMDAVecGetArrayReadF90(da,solution_vec,FandF_tau,err_PETSc)
CHKERRQ(err_PETSc)
F => FandF_tau(0: 8,:,:,:)
F_tau => FandF_tau(9:17,:,:,:)
@ -489,7 +489,7 @@ subroutine grid_mechanical_spectral_polarisation_restartWrite
call HDF5_closeFile(fileHandle)
end if
call DMDAVecRestoreArrayF90(da,solution_vec,FandF_tau,err_PETSc)
call DMDAVecRestoreArrayReadF90(da,solution_vec,FandF_tau,err_PETSc)
CHKERRQ(err_PETSc)
end subroutine grid_mechanical_spectral_polarisation_restartWrite

6
src/grid/grid_thermal_spectral.f90
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@ -285,7 +285,7 @@ end subroutine grid_thermal_spectral_forward
!--------------------------------------------------------------------------------------------------
!> @brief Write current solver and constitutive data for restart to file.
!--------------------------------------------------------------------------------------------------
subroutine grid_thermal_spectral_restartWrite
subroutine grid_thermal_spectral_restartWrite()
PetscErrorCode :: err_PETSc
DM :: dm_local
@ -294,7 +294,7 @@ subroutine grid_thermal_spectral_restartWrite
call SNESGetDM(SNES_thermal,dm_local,err_PETSc);
CHKERRQ(err_PETSc)
call DMDAVecGetArrayF90(dm_local,solution_vec,T,err_PETSc);
call DMDAVecGetArrayReadF90(dm_local,solution_vec,T,err_PETSc);
CHKERRQ(err_PETSc)
print'(1x,a)', 'saving thermal solver data required for restart'; flush(IO_STDOUT)
@ -307,7 +307,7 @@ subroutine grid_thermal_spectral_restartWrite
call HDF5_closeGroup(groupHandle)
call HDF5_closeFile(fileHandle)
call DMDAVecRestoreArrayF90(dm_local,solution_vec,T,err_PETSc);
call DMDAVecRestoreArrayReadF90(dm_local,solution_vec,T,err_PETSc);
CHKERRQ(err_PETSc)
end subroutine grid_thermal_spectral_restartWrite

36
src/result.f90
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@ -62,6 +62,7 @@ module result
result_writeDataset, &
result_writeDataset_str, &
result_setLink, &
result_addSetupFile, &
result_addAttribute, &
result_removeLink, &
result_mapping_phase, &
@ -166,7 +167,7 @@ end subroutine result_finalizeIncrement
!--------------------------------------------------------------------------------------------------
!> @brief open a group from the result file
!> @brief Open a group from the result file.
!--------------------------------------------------------------------------------------------------
integer(HID_T) function result_openGroup(groupName)
@ -179,7 +180,7 @@ end function result_openGroup
!--------------------------------------------------------------------------------------------------
!> @brief adds a new group to the result file
!> @brief Add a new group to the result file.
!--------------------------------------------------------------------------------------------------
integer(HID_T) function result_addGroup(groupName)
@ -192,7 +193,7 @@ end function result_addGroup
!--------------------------------------------------------------------------------------------------
!> @brief close a group
!> @brief Close a group.
!--------------------------------------------------------------------------------------------------
subroutine result_closeGroup(group_id)
@ -205,7 +206,7 @@ end subroutine result_closeGroup
!--------------------------------------------------------------------------------------------------
!> @brief set link to object in result file
!> @brief Set link to object in result file.
!--------------------------------------------------------------------------------------------------
subroutine result_setLink(path,link)
@ -216,6 +217,33 @@ subroutine result_setLink(path,link)
end subroutine result_setLink
!--------------------------------------------------------------------------------------------------
!> @brief Add file to setup folder and ensure unique name.
!--------------------------------------------------------------------------------------------------
subroutine result_addSetupFile(content,fname,description)
character(len=*), intent(in) :: content, fname, description
integer(HID_T) :: groupHandle
character(len=:), allocatable :: name,suffix
integer :: i
groupHandle = result_openGroup('setup')
name = fname(scan(fname,'/',.true.)+1:)
suffix = ''
i = 0
do while (HDF5_objectExists(groupHandle,name//suffix))
i = i+1
suffix = '.'//IO_intAsStr(i)
end do
call result_writeDataset_str(content,'setup',name//suffix,description)
call result_closeGroup(groupHandle)
end subroutine result_addSetupFile
!--------------------------------------------------------------------------------------------------
!> @brief Add a string attribute to an object in the result file.
!--------------------------------------------------------------------------------------------------