Merge commit 'v2.0.1-826-g347c1e3'
This commit is contained in:
Test User
commit
719949fb17
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@ -0,0 +1,97 @@
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||||||
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#!/usr/bin/env bash
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||||||
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||||||
|
OUTFILE="system_report.txt"
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||||||
|
echo date +"%m-%d-%y" >$OUTFILE
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||||||
|
|
||||||
|
# redirect STDOUT and STDERR to logfile
|
||||||
|
# https://stackoverflow.com/questions/11229385/redirect-all-output-in-a-bash-script-when-using-set-x^
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||||||
|
exec > $OUTFILE 2>&1
|
||||||
|
|
||||||
|
# directory, file is not a symlink by definition
|
||||||
|
# https://stackoverflow.com/questions/59895/getting-the-source-directory-of-a-bash-script-from-within
|
||||||
|
DAMASK_ROOT="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
|
||||||
|
|
||||||
|
echo ==============================================================================================
|
||||||
|
echo DAMASK settings
|
||||||
|
echo ==============================================================================================
|
||||||
|
echo DAMASK_ROOT:
|
||||||
|
echo $DAMASK_ROOT
|
||||||
|
echo
|
||||||
|
echo Version:
|
||||||
|
cat VERSION
|
||||||
|
echo
|
||||||
|
echo Settings in CONFIG:
|
||||||
|
cat CONFIG
|
||||||
|
echo
|
||||||
|
echo ==============================================================================================
|
||||||
|
echo System
|
||||||
|
echo ==============================================================================================
|
||||||
|
uname -a
|
||||||
|
echo
|
||||||
|
echo ==============================================================================================
|
||||||
|
echo Python
|
||||||
|
echo ==============================================================================================
|
||||||
|
|
||||||
|
DEFAULT_PYTHON=python2.7
|
||||||
|
for executable in python python2 python3 python2.7; do
|
||||||
|
if [[ "$(which $executable)x" != "x" ]]; then
|
||||||
|
echo $executable version: $($executable --version 2>&1)
|
||||||
|
else
|
||||||
|
echo $executable does not exist
|
||||||
|
fi
|
||||||
|
done
|
||||||
|
echo Location of $DEFAULT_PYTHON: $(ls -la $(which $DEFAULT_PYTHON))
|
||||||
|
echo
|
||||||
|
for module in numpy scipy;do
|
||||||
|
echo ----------------------------------------------------------------------------------------------
|
||||||
|
echo $module
|
||||||
|
echo ----------------------------------------------------------------------------------------------
|
||||||
|
$DEFAULT_PYTHON -c "import $module; \
|
||||||
|
print('Version: {}'.format($module.__version__)); \
|
||||||
|
print('Location: {}'.format($module.__file__))"
|
||||||
|
done
|
||||||
|
echo ----------------------------------------------------------------------------------------------
|
||||||
|
echo vtk
|
||||||
|
echo ----------------------------------------------------------------------------------------------
|
||||||
|
$DEFAULT_PYTHON -c "import vtk; \
|
||||||
|
print('Version: {}'.format(vtk.vtkVersion.GetVTKVersion())); \
|
||||||
|
print('Location: {}'.format(vtk.__file__))"
|
||||||
|
echo ----------------------------------------------------------------------------------------------
|
||||||
|
echo h5py
|
||||||
|
echo ----------------------------------------------------------------------------------------------
|
||||||
|
$DEFAULT_PYTHON -c "import h5py; \
|
||||||
|
print('Version: {}'.format(h5py.version.version)); \
|
||||||
|
print('Location: {}'.format(h5py.__file__))"
|
||||||
|
echo
|
||||||
|
echo ==============================================================================================
|
||||||
|
echo GCC
|
||||||
|
echo ==============================================================================================
|
||||||
|
for executable in gcc g++ gfortran ;do
|
||||||
|
if [[ "$(which $executable)x" != "x" ]]; then
|
||||||
|
echo $(which $executable) version: $($executable --version 2>&1)
|
||||||
|
else
|
||||||
|
echo $executable does not exist
|
||||||
|
fi
|
||||||
|
done
|
||||||
|
echo
|
||||||
|
echo ==============================================================================================
|
||||||
|
echo Intel Compiler Suite
|
||||||
|
echo ==============================================================================================
|
||||||
|
for executable in icc icpc ifort ;do
|
||||||
|
if [[ "$(which $executable)x" != "x" ]]; then
|
||||||
|
echo $(which $executable) version: $($executable --version 2>&1)
|
||||||
|
else
|
||||||
|
echo $executable does not exist
|
||||||
|
fi
|
||||||
|
done
|
||||||
|
echo
|
||||||
|
echo ==============================================================================================
|
||||||
|
echo MPI Wrappers
|
||||||
|
echo ==============================================================================================
|
||||||
|
for executable in mpicc mpiCC mpicxx mpicxx mpifort mpif90 mpif77; do
|
||||||
|
if [[ "$(which $executable)x" != "x" ]]; then
|
||||||
|
echo $(which $executable) version: $($executable --show 2>&1)
|
||||||
|
else
|
||||||
|
echo $executable does not exist
|
||||||
|
fi
|
||||||
|
done
|
||||||
|
|
@ -26,15 +26,11 @@ if ( "x$DAMASK_NUM_THREADS" == "x" ) then
|
||||||
set DAMASK_NUM_THREADS=1
|
set DAMASK_NUM_THREADS=1
|
||||||
endif
|
endif
|
||||||
|
|
||||||
# according to http://software.intel.com/en-us/forums/topic/501500
|
# currently, there is no information that unlimited causes problems
|
||||||
# this seems to make sense for the stack size
|
# still, http://software.intel.com/en-us/forums/topic/501500 suggest to fix it
|
||||||
if ( `which free` != "free: Command not found." ) then
|
# http://superuser.com/questions/220059/what-parameters-has-ulimit
|
||||||
set freeMem=`free -k | grep -E '(Mem|Speicher):' | awk '{print $4;}'`
|
limit datasize unlimited # maximum heap size (kB)
|
||||||
set heap=` expr $freeMem / 2`
|
limit stacksize unlimited # maximum stack size (kB)
|
||||||
set stack=`expr $freeMem / $DAMASK_NUM_THREADS / 2`
|
|
||||||
# http://superuser.com/questions/220059/what-parameters-has-ulimit
|
|
||||||
limit datasize $heap # maximum heap size (kB)
|
|
||||||
limit stacksize $stack # maximum stack size (kB)
|
|
||||||
endif
|
endif
|
||||||
if ( `limit | grep memoryuse` != "" ) then
|
if ( `limit | grep memoryuse` != "" ) then
|
||||||
limit memoryuse unlimited # maximum physical memory size
|
limit memoryuse unlimited # maximum physical memory size
|
||||||
|
|
|
||||||
|
|
@ -5,7 +5,6 @@ function canonicalPath {
|
||||||
python -c "import os,sys; print(os.path.realpath(os.path.expanduser(sys.argv[1])))" $1
|
python -c "import os,sys; print(os.path.realpath(os.path.expanduser(sys.argv[1])))" $1
|
||||||
}
|
}
|
||||||
|
|
||||||
|
|
||||||
if [ "$OSTYPE" == "linux-gnu" ] || [ "$OSTYPE" == 'linux' ]; then
|
if [ "$OSTYPE" == "linux-gnu" ] || [ "$OSTYPE" == 'linux' ]; then
|
||||||
DAMASK_ROOT=$(dirname $BASH_SOURCE)
|
DAMASK_ROOT=$(dirname $BASH_SOURCE)
|
||||||
else
|
else
|
||||||
|
|
@ -42,17 +41,11 @@ PROCESSING=$(type -p postResults || true 2>/dev/null)
|
||||||
|
|
||||||
[ "x$DAMASK_NUM_THREADS" == "x" ] && DAMASK_NUM_THREADS=1
|
[ "x$DAMASK_NUM_THREADS" == "x" ] && DAMASK_NUM_THREADS=1
|
||||||
|
|
||||||
# according to http://software.intel.com/en-us/forums/topic/501500
|
# currently, there is no information that unlimited causes problems
|
||||||
# this seems to make sense for the stack size
|
# still, http://software.intel.com/en-us/forums/topic/501500 suggest to fix it
|
||||||
FREE=$(type -p free 2>/dev/null)
|
# http://superuser.com/questions/220059/what-parameters-has-ulimit
|
||||||
if [ "x$FREE" != "x" ]; then
|
ulimit -d unlimited 2>/dev/null # maximum heap size (kB)
|
||||||
freeMem=$(free -k | grep -E '(Mem|Speicher):' | awk '{print $4;}')
|
ulimit -s unlimited 2>/dev/null # maximum stack size (kB)
|
||||||
# http://superuser.com/questions/220059/what-parameters-has-ulimit
|
|
||||||
ulimit -d unlimited 2>/dev/null \
|
|
||||||
|| ulimit -d $(expr $freeMem / 2) 2>/dev/null # maximum heap size (kB)
|
|
||||||
ulimit -s unlimited 2>/dev/null \
|
|
||||||
|| ulimit -s $(expr $freeMem / $DAMASK_NUM_THREADS / 2) 2>/dev/null # maximum stack size (kB)
|
|
||||||
fi
|
|
||||||
ulimit -v unlimited 2>/dev/null # maximum virtual memory size
|
ulimit -v unlimited 2>/dev/null # maximum virtual memory size
|
||||||
ulimit -m unlimited 2>/dev/null # maximum physical memory size
|
ulimit -m unlimited 2>/dev/null # maximum physical memory size
|
||||||
|
|
||||||
|
|
|
||||||
|
|
@ -1,6 +1,10 @@
|
||||||
# sets up an environment for DAMASK on zsh
|
# sets up an environment for DAMASK on zsh
|
||||||
# usage: source DAMASK.zsh
|
# usage: source DAMASK.zsh
|
||||||
|
|
||||||
|
function canonicalPath {
|
||||||
|
python -c "import os,sys; print(os.path.realpath(os.path.expanduser(sys.argv[1])))" $1
|
||||||
|
}
|
||||||
|
|
||||||
# transition compatibility (renamed $DAMASK_ROOT/DAMASK_env.zsh to $DAMASK_ROOT/env/DAMASK.zsh)
|
# transition compatibility (renamed $DAMASK_ROOT/DAMASK_env.zsh to $DAMASK_ROOT/env/DAMASK.zsh)
|
||||||
if [ ${0:t:r} = 'DAMASK' ]; then
|
if [ ${0:t:r} = 'DAMASK' ]; then
|
||||||
DAMASK_ROOT=${0:a:h}'/..'
|
DAMASK_ROOT=${0:a:h}'/..'
|
||||||
|
|
@ -21,19 +25,19 @@ unset -f set
|
||||||
# add DAMASK_BIN if present
|
# add DAMASK_BIN if present
|
||||||
[ "x$DAMASK_BIN" != "x" ] && PATH=$DAMASK_BIN:$PATH
|
[ "x$DAMASK_BIN" != "x" ] && PATH=$DAMASK_BIN:$PATH
|
||||||
|
|
||||||
SOLVER=`which DAMASK_spectral || True 2>/dev/null`
|
SOLVER=$(type -p DAMASK_spectral || true 2>/dev/null)
|
||||||
PROCESSING=`which postResults || True 2>/dev/null`
|
[ "x$SOLVER" == "x" ] && SOLVER='Not found!'
|
||||||
[ "x$DAMASK_NUM_THREADS" = "x" ] && DAMASK_NUM_THREADS=1
|
|
||||||
|
|
||||||
# according to http://software.intel.com/en-us/forums/topic/501500
|
PROCESSING=$(type -p postResults || true 2>/dev/null)
|
||||||
# this seems to make sense for the stack size
|
[ "x$PROCESSING" == "x" ] && PROCESSING='Not found!'
|
||||||
if [ "`which free 2>/dev/null`" != "free not found" ]; then
|
|
||||||
freeMem=`free -k | grep -E '(Mem|Speicher):' | awk '{print $4;}'`
|
|
||||||
|
|
||||||
# http://superuser.com/questions/220059/what-parameters-has-ulimit
|
[ "x$DAMASK_NUM_THREADS" == "x" ] && DAMASK_NUM_THREADS=1
|
||||||
#ulimit -d `expr $freeMem / 2` 2>/dev/null # maximum heap size (kB)
|
|
||||||
ulimit -s `expr $freeMem / $DAMASK_NUM_THREADS / 2` 2>/dev/null # maximum stack size (kB)
|
# currently, there is no information that unlimited causes problems
|
||||||
fi
|
# still, http://software.intel.com/en-us/forums/topic/501500 suggest to fix it
|
||||||
|
# http://superuser.com/questions/220059/what-parameters-has-ulimit
|
||||||
|
ulimit -d unlimited 2>/dev/null # maximum heap size (kB)
|
||||||
|
ulimit -s unlimited 2>/dev/null # maximum stack size (kB)
|
||||||
ulimit -v unlimited 2>/dev/null # maximum virtual memory size
|
ulimit -v unlimited 2>/dev/null # maximum virtual memory size
|
||||||
ulimit -m unlimited 2>/dev/null # maximum physical memory size
|
ulimit -m unlimited 2>/dev/null # maximum physical memory size
|
||||||
|
|
||||||
|
|
@ -51,8 +55,8 @@ if [ ! -z "$PS1" ]; then
|
||||||
echo "Multithreading DAMASK_NUM_THREADS=$DAMASK_NUM_THREADS"
|
echo "Multithreading DAMASK_NUM_THREADS=$DAMASK_NUM_THREADS"
|
||||||
if [ "x$PETSC_DIR" != "x" ]; then
|
if [ "x$PETSC_DIR" != "x" ]; then
|
||||||
echo "PETSc location $PETSC_DIR"
|
echo "PETSc location $PETSC_DIR"
|
||||||
[[ $(python -c "import os,sys; print(os.path.realpath(os.path.expanduser(sys.argv[1])))" "$PETSC_DIR") == $PETSC_DIR ]] \
|
[[ $(canonicalPath "$PETSC_DIR") == $PETSC_DIR ]] \
|
||||||
|| echo " ~~> "$(python -c "import os,sys; print(os.path.realpath(os.path.expanduser(sys.argv[1])))" "$PETSC_DIR")
|
|| echo " ~~> "$(canonicalPath "$PETSC_DIR")
|
||||||
fi
|
fi
|
||||||
[[ "x$PETSC_ARCH" == "x" ]] \
|
[[ "x$PETSC_ARCH" == "x" ]] \
|
||||||
|| echo "PETSc architecture $PETSC_ARCH"
|
|| echo "PETSc architecture $PETSC_ARCH"
|
||||||
|
|
@ -79,7 +83,7 @@ fi
|
||||||
export DAMASK_NUM_THREADS
|
export DAMASK_NUM_THREADS
|
||||||
export PYTHONPATH=$DAMASK_ROOT/lib:$PYTHONPATH
|
export PYTHONPATH=$DAMASK_ROOT/lib:$PYTHONPATH
|
||||||
|
|
||||||
for var in BASE STAT SOLVER PROCESSING FREE DAMASK_BIN MATCH; do
|
for var in BASE STAT SOLVER PROCESSING FREE DAMASK_BIN; do
|
||||||
unset "${var}"
|
unset "${var}"
|
||||||
done
|
done
|
||||||
for var in DAMASK MSC; do
|
for var in DAMASK MSC; do
|
||||||
|
|
|
||||||
|
|
@ -1,177 +0,0 @@
|
||||||
#
|
|
||||||
# System-Wide Abaqus Environment File
|
|
||||||
# -------------------------------------
|
|
||||||
standard_parallel = ALL
|
|
||||||
mp_mode = MPI
|
|
||||||
mp_file_system = (DETECT,DETECT)
|
|
||||||
mp_num_parallel_ftps = (4, 4)
|
|
||||||
mp_environment_export = ('MPI_PROPAGATE_TSTP',
|
|
||||||
'ABA_CM_BUFFERING',
|
|
||||||
'ABA_CM_BUFFERING_LIMIT',
|
|
||||||
'ABA_ITERATIVE_SOLVER_VERBOSE',
|
|
||||||
'ABA_DMPSOLVER_BWDPARALLELOFF',
|
|
||||||
'ABA_ELP_SURFACE_SPLIT',
|
|
||||||
'ABA_ELP_SUSPEND',
|
|
||||||
'ABA_HOME',
|
|
||||||
'ABA_MEMORY_MODE',
|
|
||||||
'ABA_MPI_MESSAGE_TRACKING',
|
|
||||||
'ABA_MPI_VERBOSE_LEVEL',
|
|
||||||
'ABA_PATH',
|
|
||||||
'ABAQUS_CSE_RELTIMETOLERANCE',
|
|
||||||
'ABA_RESOURCE_MONITOR',
|
|
||||||
'ABA_RESOURCE_USEMALLINFO',
|
|
||||||
'ABAQUS_LANG',
|
|
||||||
'ABAQUS_CSE_CURRCONFIGMAPPING',
|
|
||||||
'ABAQUS_MPF_DIAGNOSTIC_LEVEL',
|
|
||||||
'ABAQUSLM_LICENSE_FILE',
|
|
||||||
'ABQ_CRTMALLOC',
|
|
||||||
'ABQ_DATACHECK',
|
|
||||||
'ABQ_RECOVER',
|
|
||||||
'ABQ_RESTART',
|
|
||||||
'ABQ_SPLITFILE',
|
|
||||||
'ABQ_XPL_WINDOWDUMP',
|
|
||||||
'ABQ_XPL_PARTITIONSIZE',
|
|
||||||
'ABQLMHANGLIMIT',
|
|
||||||
'ABQLMQUEUE',
|
|
||||||
'ABQLMUSER',
|
|
||||||
'CCI_RENDEZVOUS',
|
|
||||||
'DOMAIN',
|
|
||||||
'DOMAIN_CPUS',
|
|
||||||
'DOUBLE_PRECISION',
|
|
||||||
'FLEXLM_DIAGNOSTICS',
|
|
||||||
'FOR0006',
|
|
||||||
'FOR0064',
|
|
||||||
'FOR_IGNORE_EXCEPTIONS',
|
|
||||||
'FOR_DISABLE_DIAGNOSTIC_DISPLAY',
|
|
||||||
'LD_PRELOAD',
|
|
||||||
'MP_NUMBER_OF_THREADS',
|
|
||||||
'MPC_GANG',
|
|
||||||
'MPI_FLAGS',
|
|
||||||
'MPI_FLUSH_FCACHE',
|
|
||||||
'MPI_RDMA_NENVELOPE',
|
|
||||||
'MPI_SOCKBUFSIZE',
|
|
||||||
'MPI_USE_MALLOPT_MMAP_MAX',
|
|
||||||
'MPI_USE_MALLOPT_MMAP_THRESHOLD',
|
|
||||||
'MPI_USE_MALLOPT_SBRK_PROTECTION',
|
|
||||||
'MPI_WORKDIR',
|
|
||||||
'MPCCI_DEBUG',
|
|
||||||
'MPCCI_CODEID',
|
|
||||||
'MPCCI_JOBID',
|
|
||||||
'MPCCI_NETDEVICE',
|
|
||||||
'MPCCI_TINFO',
|
|
||||||
'MPCCI_SERVER',
|
|
||||||
'ABAQUS_CCI_DEBUG',
|
|
||||||
'NCPUS',
|
|
||||||
'OMP_DYNAMIC',
|
|
||||||
'OMP_NUM_THREADS',
|
|
||||||
'OUTDIR',
|
|
||||||
'PAIDUP',
|
|
||||||
'PARALLEL_METHOD',
|
|
||||||
'RAIDEV_NDREG_LAZYMEM',
|
|
||||||
'ABA_SYMBOLIC_GENERALCOLLAPSE',
|
|
||||||
'ABA_SYMBOLIC_GENERAL_MAXCLIQUERANK',
|
|
||||||
'ABA_ADM_MINIMUMINCREASE',
|
|
||||||
'ABA_ADM_MINIMUMDECREASE',
|
|
||||||
'IPATH_NO_CPUAFFINITY',
|
|
||||||
'MALLOC_MMAP_THRESHOLD_',
|
|
||||||
'ABA_EXT_SIMOUTPUT',
|
|
||||||
'SMA_WS',
|
|
||||||
'SMA_PARENT',
|
|
||||||
'SMA_PLATFORM',
|
|
||||||
'ABA_PRE_DECOMPOSITION',
|
|
||||||
'ACML_FAST_MALLOC',
|
|
||||||
'ACML_FAST_MALLOC_CHUNK_SIZE',
|
|
||||||
'ACML_FAST_MALLOC_MAX_CHUNKS',
|
|
||||||
'ACML_FAST_MALLOC_DEBUG')
|
|
||||||
|
|
||||||
import driverUtils, os
|
|
||||||
#-*- mode: python -*-
|
|
||||||
|
|
||||||
# #
|
|
||||||
# Compile and Link command settings for the Windows 64 Platform #
|
|
||||||
# ( AMD Opteron / Intel EM64T ) #
|
|
||||||
# #
|
|
||||||
|
|
||||||
|
|
||||||
compile_fortran=['ifort',
|
|
||||||
'/c','/DABQ_WIN86_64', '/u',
|
|
||||||
'/iface:cref', '/recursive', '/Qauto-scalar',
|
|
||||||
'/QxSSE3', '/QaxAVX',
|
|
||||||
'/heap-arrays:1',
|
|
||||||
# '/Od', '/Ob0' # <-- Optimization
|
|
||||||
# '/Zi', # <-- Debugging
|
|
||||||
'/include:%I', '/free', '/O1', '/fpp', '/openmp', '/Qmkl']
|
|
||||||
|
|
||||||
link_sl=['LINK',
|
|
||||||
'/nologo', '/NOENTRY', '/INCREMENTAL:NO', '/subsystem:console', '/machine:AMD64',
|
|
||||||
'/NODEFAULTLIB:LIBC.LIB', '/NODEFAULTLIB:LIBCMT.LIB',
|
|
||||||
'/DEFAULTLIB:OLDNAMES.LIB', '/DEFAULTLIB:LIBIFCOREMD.LIB', '/DEFAULTLIB:LIBIFPORTMD', '/DEFAULTLIB:LIBMMD.LIB',
|
|
||||||
'/DEFAULTLIB:kernel32.lib', '/DEFAULTLIB:user32.lib', '/DEFAULTLIB:advapi32.lib',
|
|
||||||
'/FIXED:NO', '/dll',
|
|
||||||
'/def:%E', '/out:%U', '%F', '%A', '%L', '%B',
|
|
||||||
'oldnames.lib', 'user32.lib', 'ws2_32.lib', 'netapi32.lib', 'advapi32.lib']
|
|
||||||
|
|
||||||
link_exe=['LINK',
|
|
||||||
'/nologo', '/INCREMENTAL:NO', '/subsystem:console', '/machine:AMD64', '/STACK:20000000',
|
|
||||||
'/NODEFAULTLIB:LIBC.LIB', '/NODEFAULTLIB:LIBCMT.LIB', '/DEFAULTLIB:OLDNAMES.LIB', '/DEFAULTLIB:LIBIFCOREMD.LIB',
|
|
||||||
'/DEFAULTLIB:LIBIFPORTMD', '/DEFAULTLIB:LIBMMD.LIB', '/DEFAULTLIB:kernel32.lib',
|
|
||||||
'/DEFAULTLIB:user32.lib', '/DEFAULTLIB:advapi32.lib',
|
|
||||||
'/FIXED:NO', '/LARGEADDRESSAWARE',
|
|
||||||
'/out:%J', '%F', '%M', '%L', '%B', '%O',
|
|
||||||
'oldnames.lib', 'user32.lib', 'ws2_32.lib', 'netapi32.lib', 'advapi32.lib']
|
|
||||||
|
|
||||||
# Link command to be used for MAKE w/o fortran compiler.
|
|
||||||
# remove the pound signs in order to remove the comments and have the file take effect.
|
|
||||||
#
|
|
||||||
#link_exe=['LINK', '/nologo', 'INCREMENTAL:NO', '/subsystem:console', '/machine:AMD64', '/NODEFAULTLIB:LIBC.LIB', '/NODEFAULTLIB:LIBCMT.LIB',
|
|
||||||
# '/DEFAULTLIB:OLDNAMES.LIB', '/DEFAULTLIB:MSVCRT.LIB', '/DEFAULTLIB:kernel32.lib', 'DEFAULTLIB:user32.lib', '/DEFAULTLIB:advapi32.lib',
|
|
||||||
# '/FIXED:NO', '/LARGEADDRESSAWARE', '/DEBUG', '/out:%J', '%F', '%M', '%L', '%B', '%O', 'oldnames.lib', 'user32.lib', 'ws2_32.lib',
|
|
||||||
# 'netapi32.lib', 'advapi32.lib]
|
|
||||||
|
|
||||||
# MPI Configuration
|
|
||||||
mp_mode = THREADS
|
|
||||||
|
|
||||||
mp_mpi_implementation = NATIVE
|
|
||||||
mp_rsh_command = 'dummy %H -l %U -n %C'
|
|
||||||
mp_mpirun_path = {}
|
|
||||||
mpirun = ''
|
|
||||||
progDir = os.environ.get('ProgramFiles','C:\\Program Files')
|
|
||||||
|
|
||||||
for mpiDir in ('Microsoft HPC Pack', 'Microsoft HPC Pack 2008 R2', 'Microsoft HPC Pack 2008', 'Microsoft HPC Pack 2008 SDK'):
|
|
||||||
mpirun = progDir + os.sep + mpiDir + os.sep + 'bin' + os.sep + 'mpiexec.exe'
|
|
||||||
if os.path.exists(mpirun):
|
|
||||||
mp_mpirun_path[NATIVE] = mpirun
|
|
||||||
mp_mpirun_path[MSSDK] = os.path.join(progDir, mpiDir)
|
|
||||||
break
|
|
||||||
|
|
||||||
if os.environ.has_key('CCP_HOME'):
|
|
||||||
from queueCCS import QueueCCS
|
|
||||||
queues['default'] = QueueCCS(queueName='share')
|
|
||||||
queues['share'] = QueueCCS(queueName='share')
|
|
||||||
queues['local'] = QueueCCS(queueName='local')
|
|
||||||
queues['genxmlshare'] = QueueCCS(queueName='genxmlshare')
|
|
||||||
queues['genxmllocal'] = QueueCCS(queueName='genxmllocal')
|
|
||||||
del QueueCCS
|
|
||||||
mpirun = os.path.join(os.environ['CCP_HOME'], 'bin', 'mpiexec.exe')
|
|
||||||
if os.path.exists(mpirun):
|
|
||||||
mp_mpirun_path[NATIVE] = mpirun
|
|
||||||
run_mode=BATCH
|
|
||||||
|
|
||||||
if mp_mpirun_path:
|
|
||||||
mp_mode=MPI
|
|
||||||
|
|
||||||
del progDir, mpiDir, mpirun
|
|
||||||
|
|
||||||
graphicsEnv = driverUtils.locateFile(os.environ['ABA_PATH'],'site','graphicsConfig','env')
|
|
||||||
if graphicsEnv:
|
|
||||||
execfile(graphicsEnv)
|
|
||||||
else:
|
|
||||||
raise 'Cannot find the graphics configuration environment file (graphicsConfig.env)'
|
|
||||||
|
|
||||||
del driverUtils, os, graphicsEnv
|
|
||||||
license_server_type=FLEXNET
|
|
||||||
|
|
||||||
abaquslm_license_file=""
|
|
||||||
doc_root="
|
|
||||||
doc_root_type="html"
|
|
||||||
academic=RESEARCH
|
|
||||||
|
|
@ -14,12 +14,6 @@ except(NameError):
|
||||||
class ASCIItable():
|
class ASCIItable():
|
||||||
"""Read and write to ASCII tables"""
|
"""Read and write to ASCII tables"""
|
||||||
|
|
||||||
__slots__ = ['__IO__',
|
|
||||||
'info',
|
|
||||||
'labeled',
|
|
||||||
'data',
|
|
||||||
]
|
|
||||||
|
|
||||||
tmpext = '_tmp' # filename extension for in-place access
|
tmpext = '_tmp' # filename extension for in-place access
|
||||||
|
|
||||||
# ------------------------------------------------------------------
|
# ------------------------------------------------------------------
|
||||||
|
|
|
||||||
|
|
@ -101,8 +101,6 @@ class Texture(Section):
|
||||||
class Material():
|
class Material():
|
||||||
"""Reads, manipulates and writes material.config files"""
|
"""Reads, manipulates and writes material.config files"""
|
||||||
|
|
||||||
__slots__ = ['data']
|
|
||||||
|
|
||||||
def __init__(self,verbose=True):
|
def __init__(self,verbose=True):
|
||||||
"""Generates ordered list of parts"""
|
"""Generates ordered list of parts"""
|
||||||
self.parts = [
|
self.parts = [
|
||||||
|
|
|
||||||
|
|
@ -61,7 +61,6 @@ for name in filenames:
|
||||||
# ------------------------------------------ process data ---------------------------------------
|
# ------------------------------------------ process data ---------------------------------------
|
||||||
|
|
||||||
table.data_readArray(options.pos)
|
table.data_readArray(options.pos)
|
||||||
if len(table.data.shape) < 2: table.data.shape += (1,) # expand to 2D shape
|
|
||||||
if table.data.shape[1] < 3:
|
if table.data.shape[1] < 3:
|
||||||
table.data = np.hstack((table.data,
|
table.data = np.hstack((table.data,
|
||||||
np.zeros((table.data.shape[0],
|
np.zeros((table.data.shape[0],
|
||||||
|
|
|
||||||
|
|
@ -70,7 +70,6 @@ for name in filenames:
|
||||||
# --------------- figure out size and grid ---------------------------------------------------------
|
# --------------- figure out size and grid ---------------------------------------------------------
|
||||||
|
|
||||||
table.data_readArray(options.pos)
|
table.data_readArray(options.pos)
|
||||||
if len(table.data.shape) < 2: table.data.shape += (1,) # expand to 2D shape
|
|
||||||
if table.data.shape[1] < 3:
|
if table.data.shape[1] < 3:
|
||||||
table.data = np.hstack((table.data,
|
table.data = np.hstack((table.data,
|
||||||
np.zeros((table.data.shape[0],
|
np.zeros((table.data.shape[0],
|
||||||
|
|
|
||||||
Loading…
Reference in New Issue