Removed hard requirement of 3D dataset. Fills in necessary dimensions.
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284c2783e2
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@ -38,9 +38,9 @@ parser.set_defaults(position ='ipinitialcoord',
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if filenames == []: filenames = [None]
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for name in filenames:
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try:
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table = damask.ASCIItable(name = name,
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buffered = False, readonly = True)
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try: table = damask.ASCIItable(name = name,
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buffered = False,
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readonly = True)
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except: continue
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damask.util.report(scriptName,name)
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@ -48,10 +48,13 @@ for name in filenames:
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table.head_read()
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remarks = []
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errors = []
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if table.label_dimension(options.position) != 3:
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errors.append('coordinates {} are not a vector.'.format(options.position))
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coordDim = table.label_dimension(options.position)
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if not 3 >= coordDim >= 1: errors.append('coordinates "{}" need to have one, two, or three dimensions.'.format(options.position))
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elif coordDim < 3: remarks.append('appending {} dimensions to coordinates "{}"...'.format(3-coordDim,options.position))
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if remarks != []: damask.util.croak(remarks)
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if errors != []:
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damask.util.croak(errors)
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table.close(dismiss=True)
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@ -60,6 +63,11 @@ for name in filenames:
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# --------------- figure out size and grid ---------------------------------------------------------
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table.data_readArray(options.position)
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if len(table.data.shape) < 2: table.data.shape += (1,) # expand to 2D shape
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if table.data.shape[1] < 3:
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table.data = np.hstack((table.data,
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np.zeros((table.data.shape[0],
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3-table.data.shape[1]),dtype='f'))) # fill coords up to 3D with zeros
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coords = [np.unique(table.data[:,i]) for i in xrange(3)]
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if options.mode == 'cell':
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