Merge branch 'development' into clean-MPI-exit
This commit is contained in:
commit
68b583e4da
|
@ -14,7 +14,7 @@
|
||||||
# ignore files from MSC.Marc in language statistics
|
# ignore files from MSC.Marc in language statistics
|
||||||
install/MarcMentat/** linguist-vendored
|
install/MarcMentat/** linguist-vendored
|
||||||
src/Marc/include/* linguist-vendored
|
src/Marc/include/* linguist-vendored
|
||||||
install/MarcMentat/apply_DAMASK_modifications.py linguist-vendored=false
|
install/MarcMentat/MSC_modifications.py linguist-vendored=false
|
||||||
|
|
||||||
# ignore reference files for tests in language statistics
|
# ignore reference files for tests in language statistics
|
||||||
python/tests/reference/** linguist-vendored
|
python/tests/reference/** linguist-vendored
|
||||||
|
|
|
@ -2,7 +2,7 @@ name: Grid and Mesh Solver
|
||||||
on: [push]
|
on: [push]
|
||||||
|
|
||||||
env:
|
env:
|
||||||
PETSC_VERSION: '3.17.1'
|
PETSC_VERSION: '3.18.2'
|
||||||
HOMEBREW_NO_ANALYTICS: 'ON' # Make Homebrew installation a little quicker
|
HOMEBREW_NO_ANALYTICS: 'ON' # Make Homebrew installation a little quicker
|
||||||
HOMEBREW_NO_AUTO_UPDATE: 'ON'
|
HOMEBREW_NO_AUTO_UPDATE: 'ON'
|
||||||
HOMEBREW_NO_BOTTLE_SOURCE_FALLBACK: 'ON'
|
HOMEBREW_NO_BOTTLE_SOURCE_FALLBACK: 'ON'
|
||||||
|
@ -11,24 +11,23 @@ env:
|
||||||
|
|
||||||
jobs:
|
jobs:
|
||||||
|
|
||||||
gcc:
|
gcc_ubuntu:
|
||||||
|
|
||||||
runs-on: ${{ matrix.os }}
|
runs-on: ubuntu-22.04
|
||||||
|
|
||||||
strategy:
|
strategy:
|
||||||
matrix:
|
matrix:
|
||||||
os: [ubuntu-latest, macos-latest]
|
gcc_v: [9, 10, 11, 12]
|
||||||
gcc_v: [9, 10, 11] # Version of GCC compilers
|
fail-fast: false
|
||||||
|
|
||||||
env:
|
env:
|
||||||
GCC_V: ${{ matrix.gcc_v }}
|
GCC_V: ${{ matrix.gcc_v }}
|
||||||
|
|
||||||
steps:
|
steps:
|
||||||
|
|
||||||
- uses: actions/checkout@v2
|
- uses: actions/checkout@v3
|
||||||
|
|
||||||
- name: GCC - Install (Linux)
|
- name: GCC - Install
|
||||||
if: contains( matrix.os, 'ubuntu')
|
|
||||||
run: |
|
run: |
|
||||||
sudo add-apt-repository ppa:ubuntu-toolchain-r/test
|
sudo add-apt-repository ppa:ubuntu-toolchain-r/test
|
||||||
sudo apt-get update
|
sudo apt-get update
|
||||||
|
@ -38,15 +37,9 @@ jobs:
|
||||||
--slave /usr/bin/g++ g++ /usr/bin/g++-${GCC_V} \
|
--slave /usr/bin/g++ g++ /usr/bin/g++-${GCC_V} \
|
||||||
--slave /usr/bin/gcov gcov /usr/bin/gcov-${GCC_V}
|
--slave /usr/bin/gcov gcov /usr/bin/gcov-${GCC_V}
|
||||||
|
|
||||||
- name: GCC - Install (macOS)
|
|
||||||
if: contains( matrix.os, 'macos')
|
|
||||||
run: |
|
|
||||||
brew install gcc@${GCC_V} || brew upgrade gcc@${GCC_V} || true
|
|
||||||
brew link gcc@${GCC_V}
|
|
||||||
|
|
||||||
- name: PETSc - Cache download
|
- name: PETSc - Cache download
|
||||||
id: petsc-download
|
id: petsc-download
|
||||||
uses: actions/cache@v2
|
uses: actions/cache@v3
|
||||||
with:
|
with:
|
||||||
path: download
|
path: download
|
||||||
key: petsc-${{ env.PETSC_VERSION }}.tar.gz
|
key: petsc-${{ env.PETSC_VERSION }}.tar.gz
|
||||||
|
@ -63,28 +56,19 @@ jobs:
|
||||||
export PETSC_ARCH=gcc${GCC_V}
|
export PETSC_ARCH=gcc${GCC_V}
|
||||||
printenv >> $GITHUB_ENV
|
printenv >> $GITHUB_ENV
|
||||||
|
|
||||||
- name: PETSc - Cache installation
|
- name: PETSc - Cache Installation
|
||||||
id: petsc-install
|
id: petsc-install
|
||||||
uses: actions/cache@v2
|
uses: actions/cache@v3
|
||||||
with:
|
with:
|
||||||
path: petsc-${{ env.PETSC_VERSION }}
|
path: petsc-${{ env.PETSC_VERSION }}
|
||||||
key: petsc-${{ env.PETSC_VERSION }}-${{ matrix.os }}-gcc${{ matrix.gcc_v }}-${{ hashFiles('**/petscversion.h') }}
|
key: petsc-${{ env.PETSC_VERSION }}-gcc${{ matrix.gcc_v }}-${{ hashFiles('**/petscversion.h') }}
|
||||||
|
|
||||||
- name: PETSc - Install (Linux)
|
- name: PETSc - Installation
|
||||||
if: contains( matrix.os, 'ubuntu')
|
|
||||||
run: |
|
run: |
|
||||||
cd petsc-${PETSC_VERSION}
|
cd petsc-${PETSC_VERSION}
|
||||||
./configure --with-fc=gfortran --with-cc=gcc --with-cxx=g++ \
|
./configure --with-fc=gfortran --with-cc=gcc --with-cxx=g++ \
|
||||||
--download-mpich --download-fftw --download-hdf5 --download-hdf5-fortran-bindings=1 --download-zlib \
|
--download-openmpi --download-fftw --download-hdf5 --download-hdf5-fortran-bindings=1 --download-zlib \
|
||||||
--with-mpi-f90module-visibility=0
|
--with-mpi-f90module-visibility=1
|
||||||
make all
|
|
||||||
|
|
||||||
- name: PETSc - Install (macOS)
|
|
||||||
if: contains( matrix.os, 'macos')
|
|
||||||
run: |
|
|
||||||
cd petsc-${PETSC_VERSION}
|
|
||||||
./configure --with-fc=gfortran-${GCC_V} --with-cc=gcc-${GCC_V} --with-cxx=g++-${GCC_V} \
|
|
||||||
--download-openmpi --download-fftw --download-hdf5 --download-hdf5-fortran-bindings=1 --download-zlib
|
|
||||||
make all
|
make all
|
||||||
|
|
||||||
- name: DAMASK - Compile
|
- name: DAMASK - Compile
|
||||||
|
@ -100,19 +84,21 @@ jobs:
|
||||||
run: |
|
run: |
|
||||||
./bin/DAMASK_grid -l tensionX.yaml -g 20grains16x16x16.vti -w examples/grid
|
./bin/DAMASK_grid -l tensionX.yaml -g 20grains16x16x16.vti -w examples/grid
|
||||||
|
|
||||||
|
|
||||||
intel:
|
intel:
|
||||||
|
|
||||||
runs-on: [ubuntu-latest]
|
runs-on: [ubuntu-22.04]
|
||||||
|
|
||||||
strategy:
|
strategy:
|
||||||
matrix:
|
matrix:
|
||||||
intel_v: [classic, llvm] # Variant of Intel compilers
|
intel_v: [classic, llvm] # Variant of Intel compilers
|
||||||
|
fail-fast: false
|
||||||
|
|
||||||
env:
|
env:
|
||||||
INTEL_V: ${{ matrix.intel_v }}
|
INTEL_V: ${{ matrix.intel_v }}
|
||||||
|
|
||||||
steps:
|
steps:
|
||||||
- uses: actions/checkout@v2
|
- uses: actions/checkout@v3
|
||||||
|
|
||||||
- name: Intel - Install
|
- name: Intel - Install
|
||||||
run: |
|
run: |
|
||||||
|
@ -130,7 +116,7 @@ jobs:
|
||||||
|
|
||||||
- name: PETSc - Cache download
|
- name: PETSc - Cache download
|
||||||
id: petsc-download
|
id: petsc-download
|
||||||
uses: actions/cache@v2
|
uses: actions/cache@v3
|
||||||
with:
|
with:
|
||||||
path: download
|
path: download
|
||||||
key: petsc-${{ env.PETSC_VERSION }}.tar.gz
|
key: petsc-${{ env.PETSC_VERSION }}.tar.gz
|
||||||
|
@ -143,13 +129,15 @@ jobs:
|
||||||
- name: PETSc - Prepare
|
- name: PETSc - Prepare
|
||||||
run: |
|
run: |
|
||||||
tar -xf download/petsc-${PETSC_VERSION}.tar.gz -C .
|
tar -xf download/petsc-${PETSC_VERSION}.tar.gz -C .
|
||||||
|
sed -i "1718s/if not os.path.isfile(os.path.join(self.packageDir,'configure')):/if True:/g" \
|
||||||
|
./petsc-${PETSC_VERSION}/config/BuildSystem/config/package.py
|
||||||
export PETSC_DIR=${PWD}/petsc-${PETSC_VERSION}
|
export PETSC_DIR=${PWD}/petsc-${PETSC_VERSION}
|
||||||
export PETSC_ARCH=intel-${INTEL_V}
|
export PETSC_ARCH=intel-${INTEL_V}
|
||||||
printenv >> $GITHUB_ENV
|
printenv >> $GITHUB_ENV
|
||||||
|
|
||||||
- name: PETSc - Cache installation
|
- name: PETSc - Cache installation
|
||||||
id: petsc-install
|
id: petsc-install
|
||||||
uses: actions/cache@v2
|
uses: actions/cache@v3
|
||||||
with:
|
with:
|
||||||
path: petsc-${{ env.PETSC_VERSION }}
|
path: petsc-${{ env.PETSC_VERSION }}
|
||||||
key: petsc-${{ env.PETSC_VERSION }}-intel-${{ matrix.intel_v }}-${{ hashFiles('**/petscversion.h') }}
|
key: petsc-${{ env.PETSC_VERSION }}-intel-${{ matrix.intel_v }}-${{ hashFiles('**/petscversion.h') }}
|
||||||
|
@ -158,7 +146,10 @@ jobs:
|
||||||
if: contains( matrix.intel_v, 'classic')
|
if: contains( matrix.intel_v, 'classic')
|
||||||
run: |
|
run: |
|
||||||
cd petsc-${PETSC_VERSION}
|
cd petsc-${PETSC_VERSION}
|
||||||
./configure --with-fc=mpiifort --with-cc=mpiicc --with-cxx=mpiicpc \
|
./configure \
|
||||||
|
--with-fc='mpiifort -fc=ifort -diag-disable=10441' \
|
||||||
|
--with-cc='mpiicc -cc=icc -diag-disable=10441' \
|
||||||
|
--with-cxx='mpiicpc -cxx=icpc -diag-disable=10441' \
|
||||||
--download-fftw --download-hdf5 --download-hdf5-fortran-bindings=1 --download-zlib
|
--download-fftw --download-hdf5 --download-hdf5-fortran-bindings=1 --download-zlib
|
||||||
make all
|
make all
|
||||||
|
|
||||||
|
@ -166,7 +157,10 @@ jobs:
|
||||||
if: contains( matrix.intel_v, 'llvm')
|
if: contains( matrix.intel_v, 'llvm')
|
||||||
run: |
|
run: |
|
||||||
cd petsc-${PETSC_VERSION}
|
cd petsc-${PETSC_VERSION}
|
||||||
./configure --with-fc=mpiifort --with-cc="mpiicc -cc=icx" --with-cxx="mpiicpc -cxx=icpx" \
|
./configure \
|
||||||
|
--with-fc='mpiifort -fc=ifx' \
|
||||||
|
--with-cc='mpiicc -cc=icx' \
|
||||||
|
--with-cxx='mpiicpc -cxx=icpx' \
|
||||||
--download-fftw --download-hdf5 --download-hdf5-fortran-bindings=1 --download-zlib
|
--download-fftw --download-hdf5 --download-hdf5-fortran-bindings=1 --download-zlib
|
||||||
make all
|
make all
|
||||||
|
|
||||||
|
|
|
@ -9,22 +9,22 @@ jobs:
|
||||||
|
|
||||||
strategy:
|
strategy:
|
||||||
matrix:
|
matrix:
|
||||||
python-version: ['3.8', '3.9'] #, '3.10']
|
python-version: ['3.8', '3.9', '3.10']
|
||||||
os: [ubuntu-latest, macos-latest, windows-latest]
|
os: [ubuntu-latest, macos-latest, windows-latest]
|
||||||
fail-fast: false
|
fail-fast: false
|
||||||
|
|
||||||
steps:
|
steps:
|
||||||
- uses: actions/checkout@v2
|
- uses: actions/checkout@v3
|
||||||
|
|
||||||
- name: Set up Python ${{ matrix.python-version }}
|
- name: Set up Python ${{ matrix.python-version }}
|
||||||
uses: actions/setup-python@v2
|
uses: actions/setup-python@v4
|
||||||
with:
|
with:
|
||||||
python-version: ${{ matrix.python-version }}
|
python-version: ${{ matrix.python-version }}
|
||||||
|
|
||||||
- name: Install dependencies
|
- name: Install dependencies
|
||||||
run: |
|
run: |
|
||||||
python -m pip install --upgrade pip
|
python -m pip install --upgrade pip
|
||||||
pip install pytest pandas scipy h5py vtk matplotlib pyyaml
|
pip install pytest pandas scipy h5py vtk matplotlib pyyaml build
|
||||||
|
|
||||||
- name: Strip git hash (Unix)
|
- name: Strip git hash (Unix)
|
||||||
if: runner.os != 'Windows'
|
if: runner.os != 'Windows'
|
||||||
|
@ -39,6 +39,13 @@ jobs:
|
||||||
$VERSION,$_ = $VERSION -Split '-g',2,"simplematch"
|
$VERSION,$_ = $VERSION -Split '-g',2,"simplematch"
|
||||||
$VERSION | Out-File VERSION
|
$VERSION | Out-File VERSION
|
||||||
|
|
||||||
|
- name: Build and Install
|
||||||
|
run: |
|
||||||
|
cd python
|
||||||
|
python -m build
|
||||||
|
python -m pip install dist/*.whl
|
||||||
|
python -c 'import damask;print(damask.__version__)'
|
||||||
|
|
||||||
- name: Install and run unit tests (Unix)
|
- name: Install and run unit tests (Unix)
|
||||||
if: runner.os != 'Windows'
|
if: runner.os != 'Windows'
|
||||||
run: |
|
run: |
|
||||||
|
@ -56,7 +63,7 @@ jobs:
|
||||||
runs-on: ubuntu-latest
|
runs-on: ubuntu-latest
|
||||||
|
|
||||||
steps:
|
steps:
|
||||||
- uses: actions/checkout@v2
|
- uses: actions/checkout@v3
|
||||||
|
|
||||||
- name: Install pytest
|
- name: Install pytest
|
||||||
run: |
|
run: |
|
||||||
|
|
|
@ -47,9 +47,9 @@ variables:
|
||||||
PETSC_INTELLLVM: "Libraries/PETSc/3.16.3/oneAPI-2022.0.1-IntelMPI-2021.5.0"
|
PETSC_INTELLLVM: "Libraries/PETSc/3.16.3/oneAPI-2022.0.1-IntelMPI-2021.5.0"
|
||||||
PETSC_INTEL: "Libraries/PETSc/3.16.5/Intel-2022.0.1-IntelMPI-2021.5.0"
|
PETSC_INTEL: "Libraries/PETSc/3.16.5/Intel-2022.0.1-IntelMPI-2021.5.0"
|
||||||
# ++++++++++++ MSC Marc +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
|
# ++++++++++++ MSC Marc +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
|
||||||
MSC: "FEM/MSC/2022.1"
|
MSC: "FEM/MSC/2022.4"
|
||||||
IntelMarc: "Compiler/Intel/19.1.2 Libraries/IMKL/2020"
|
IntelMarc: "Compiler/Intel/19.1.2 Libraries/IMKL/2020"
|
||||||
HDF5Marc: "HDF5/1.12.1/Intel-19.1.2"
|
HDF5Marc: "HDF5/1.12.2/Intel-19.1.2"
|
||||||
|
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
|
@ -63,12 +63,19 @@ create_testroot:
|
||||||
|
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
|
setuptools:
|
||||||
|
stage: python
|
||||||
|
script:
|
||||||
|
- sed -i 's/-[[:digit:]]*-.*//' VERSION
|
||||||
|
- cd python
|
||||||
|
- python3 -m build --wheel --no-isolation
|
||||||
|
|
||||||
pytest:
|
pytest:
|
||||||
stage: python
|
stage: python
|
||||||
script:
|
script:
|
||||||
- cd python
|
- cd python
|
||||||
- pytest --basetemp ${TESTROOT}/python -v --cov --cov-report=term
|
- pytest --basetemp ${TESTROOT}/python -v --cov
|
||||||
- coverage report --fail-under=90
|
- coverage report --fail-under=90 --show-missing
|
||||||
|
|
||||||
mypy:
|
mypy:
|
||||||
stage: python
|
stage: python
|
||||||
|
|
|
@ -11,7 +11,7 @@ endif()
|
||||||
project(Prerequisites LANGUAGES)
|
project(Prerequisites LANGUAGES)
|
||||||
set(ENV{PKG_CONFIG_PATH} "$ENV{PETSC_DIR}/$ENV{PETSC_ARCH}/lib/pkgconfig:$ENV{PKG_CONFIG_PATH}")
|
set(ENV{PKG_CONFIG_PATH} "$ENV{PETSC_DIR}/$ENV{PETSC_ARCH}/lib/pkgconfig:$ENV{PKG_CONFIG_PATH}")
|
||||||
pkg_check_modules(PETSC_MIN REQUIRED PETSc>=3.12.0 QUIET) #CMake does not support version range
|
pkg_check_modules(PETSC_MIN REQUIRED PETSc>=3.12.0 QUIET) #CMake does not support version range
|
||||||
pkg_check_modules(PETSC REQUIRED PETSc<3.18.0)
|
pkg_check_modules(PETSC REQUIRED PETSc<3.19.0)
|
||||||
|
|
||||||
pkg_get_variable(CMAKE_Fortran_COMPILER PETSc fcompiler)
|
pkg_get_variable(CMAKE_Fortran_COMPILER PETSc fcompiler)
|
||||||
pkg_get_variable(CMAKE_C_COMPILER PETSc ccompiler)
|
pkg_get_variable(CMAKE_C_COMPILER PETSc ccompiler)
|
||||||
|
@ -90,14 +90,21 @@ endif()
|
||||||
|
|
||||||
|
|
||||||
list(APPEND CMAKE_MODULE_PATH ${PROJECT_SOURCE_DIR}/cmake)
|
list(APPEND CMAKE_MODULE_PATH ${PROJECT_SOURCE_DIR}/cmake)
|
||||||
if (CMAKE_Fortran_COMPILER_ID STREQUAL "Intel")
|
if (CMAKE_Fortran_COMPILER_ID STREQUAL "GNU")
|
||||||
include(Compiler-Intel)
|
|
||||||
elseif(CMAKE_Fortran_COMPILER_ID STREQUAL "GNU")
|
|
||||||
include(Compiler-GNU)
|
include(Compiler-GNU)
|
||||||
|
set(Fortran_COMPILER_VERSION_MIN 9.1)
|
||||||
|
elseif(CMAKE_Fortran_COMPILER_ID STREQUAL "Intel")
|
||||||
|
include(Compiler-Intel)
|
||||||
|
set(Fortran_COMPILER_VERSION_MIN 19)
|
||||||
elseif(CMAKE_Fortran_COMPILER_ID STREQUAL "IntelLLVM")
|
elseif(CMAKE_Fortran_COMPILER_ID STREQUAL "IntelLLVM")
|
||||||
include(Compiler-IntelLLVM)
|
include(Compiler-IntelLLVM)
|
||||||
|
set(Fortran_COMPILER_VERSION_MIN 19)
|
||||||
else()
|
else()
|
||||||
message(FATAL_ERROR "Compiler type(CMAKE_Fortran_COMPILER_ID) not recognized")
|
message(FATAL_ERROR "Compiler '${CMAKE_Fortran_COMPILER_ID}' not supported")
|
||||||
|
endif()
|
||||||
|
|
||||||
|
if(CMAKE_Fortran_COMPILER_VERSION VERSION_LESS Fortran_COMPILER_VERSION_MIN)
|
||||||
|
message(FATAL_ERROR "Version '${CMAKE_Fortran_COMPILER_VERSION}' of '${CMAKE_Fortran_COMPILER_ID}' is not supported")
|
||||||
endif()
|
endif()
|
||||||
|
|
||||||
file(STRINGS "$ENV{PETSC_DIR}/$ENV{PETSC_ARCH}/lib/petsc/conf/petscvariables" PETSC_EXTERNAL_LIB REGEX "PETSC_EXTERNAL_LIB_BASIC = .*$?")
|
file(STRINGS "$ENV{PETSC_DIR}/$ENV{PETSC_ARCH}/lib/petsc/conf/petscvariables" PETSC_EXTERNAL_LIB REGEX "PETSC_EXTERNAL_LIB_BASIC = .*$?")
|
||||||
|
|
2
LICENSE
2
LICENSE
|
@ -1,4 +1,4 @@
|
||||||
Copyright 2011-2022 Max-Planck-Institut für Eisenforschung GmbH
|
Copyright 2011-2023 Max-Planck-Institut für Eisenforschung GmbH
|
||||||
|
|
||||||
DAMASK is free software: you can redistribute it and/or modify
|
DAMASK is free software: you can redistribute it and/or modify
|
||||||
it under the terms of the GNU Affero General Public License as
|
it under the terms of the GNU Affero General Public License as
|
||||||
|
|
2
PRIVATE
2
PRIVATE
|
@ -1 +1 @@
|
||||||
Subproject commit a8bd47ad55125b477e6c03277ee38ce3998a66ca
|
Subproject commit 547bfe56d67cba358a7bb9582f2f7c0e344befd8
|
|
@ -29,8 +29,8 @@ set (LINKER_FLAGS "${LINKER_FLAGS} -shared-intel")
|
||||||
set (COMPILE_FLAGS "${COMPILE_FLAGS} -fpp")
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -fpp")
|
||||||
# preprocessor
|
# preprocessor
|
||||||
|
|
||||||
set (COMPILE_FLAGS "${COMPILE_FLAGS} -ftz")
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -no-ftz")
|
||||||
# flush underflow to zero, automatically set if -O[1,2,3]
|
# disable flush underflow to zero, will be set if -O[1,2,3]
|
||||||
|
|
||||||
set (COMPILE_FLAGS "${COMPILE_FLAGS} -diag-disable")
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -diag-disable")
|
||||||
# disables warnings ...
|
# disables warnings ...
|
||||||
|
@ -95,8 +95,8 @@ set (DEBUG_FLAGS "${DEBUG_FLAGS},uninit")
|
||||||
# ... for uninitialized variables.
|
# ... for uninitialized variables.
|
||||||
set (DEBUG_FLAGS "${DEBUG_FLAGS} -ftrapuv")
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -ftrapuv")
|
||||||
# ... initializes stack local variables to an unusual value to aid error detection
|
# ... initializes stack local variables to an unusual value to aid error detection
|
||||||
set (DEBUG_FLAGS "${DEBUG_FLAGS} -fpe-all=0")
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -fpe-all=0 -ftz")
|
||||||
# ... capture all floating-point exceptions, sets -ftz automatically
|
# ... capture all floating-point exceptions, need to overwrite -no-ftz
|
||||||
|
|
||||||
# disable due to compiler bug https://community.intel.com/t5/Intel-Fortran-Compiler/false-positive-stand-f18-and-IEEE-SELECTED-REAL-KIND/m-p/1227336
|
# disable due to compiler bug https://community.intel.com/t5/Intel-Fortran-Compiler/false-positive-stand-f18-and-IEEE-SELECTED-REAL-KIND/m-p/1227336
|
||||||
#set (DEBUG_FLAGS "${DEBUG_FLAGS} -warn")
|
#set (DEBUG_FLAGS "${DEBUG_FLAGS} -warn")
|
||||||
|
|
|
@ -14,8 +14,8 @@ if (OPTIMIZATION STREQUAL "OFF" OR OPTIMIZATION STREQUAL "DEBUG")
|
||||||
elseif (OPTIMIZATION STREQUAL "DEFENSIVE")
|
elseif (OPTIMIZATION STREQUAL "DEFENSIVE")
|
||||||
set (OPTIMIZATION_FLAGS "-O2")
|
set (OPTIMIZATION_FLAGS "-O2")
|
||||||
elseif (OPTIMIZATION STREQUAL "AGGRESSIVE")
|
elseif (OPTIMIZATION STREQUAL "AGGRESSIVE")
|
||||||
set (OPTIMIZATION_FLAGS "-ipo -O3 -fp-model fast=2 -xHost")
|
#set (OPTIMIZATION_FLAGS "-ipo -O3 -fp-model fast=2 -xHost") # ifx 2022.0 has problems with YAML types and IPO
|
||||||
# -fast = -ipo, -O3, -no-prec-div, -static, -fp-model fast=2, and -xHost"
|
set (OPTIMIZATION_FLAGS "-O3 -fp-model fast=2 -xHost")
|
||||||
endif ()
|
endif ()
|
||||||
|
|
||||||
# -assume std_mod_proc_name (included in -standard-semantics) causes problems if other modules
|
# -assume std_mod_proc_name (included in -standard-semantics) causes problems if other modules
|
||||||
|
@ -29,8 +29,8 @@ set (LINKER_FLAGS "${LINKER_FLAGS} -shared-intel")
|
||||||
set (COMPILE_FLAGS "${COMPILE_FLAGS} -fpp")
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -fpp")
|
||||||
# preprocessor
|
# preprocessor
|
||||||
|
|
||||||
set (COMPILE_FLAGS "${COMPILE_FLAGS} -ftz")
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -no-ftz")
|
||||||
# flush underflow to zero, automatically set if -O[1,2,3]
|
# disable flush underflow to zero, will be set if -O[1,2,3]
|
||||||
|
|
||||||
set (COMPILE_FLAGS "${COMPILE_FLAGS} -diag-disable")
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -diag-disable")
|
||||||
# disables warnings ...
|
# disables warnings ...
|
||||||
|
@ -95,8 +95,8 @@ set (DEBUG_FLAGS "${DEBUG_FLAGS},uninit")
|
||||||
# ... for uninitialized variables.
|
# ... for uninitialized variables.
|
||||||
set (DEBUG_FLAGS "${DEBUG_FLAGS} -ftrapuv")
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -ftrapuv")
|
||||||
# ... initializes stack local variables to an unusual value to aid error detection
|
# ... initializes stack local variables to an unusual value to aid error detection
|
||||||
set (DEBUG_FLAGS "${DEBUG_FLAGS} -fpe-all=0")
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -fpe-all=0 -ftz")
|
||||||
# ... capture all floating-point exceptions, sets -ftz automatically
|
# ... capture all floating-point exceptions, need to overwrite -no-ftz
|
||||||
|
|
||||||
# disable due to compiler bug https://community.intel.com/t5/Intel-Fortran-Compiler/false-positive-stand-f18-and-IEEE-SELECTED-REAL-KIND/m-p/1227336
|
# disable due to compiler bug https://community.intel.com/t5/Intel-Fortran-Compiler/false-positive-stand-f18-and-IEEE-SELECTED-REAL-KIND/m-p/1227336
|
||||||
#set (DEBUG_FLAGS "${DEBUG_FLAGS} -warn")
|
#set (DEBUG_FLAGS "${DEBUG_FLAGS} -warn")
|
||||||
|
|
|
@ -1,62 +0,0 @@
|
||||||
type: dislotwin
|
|
||||||
output: [rho_mob, rho_dip, gamma_sl, Lambda_sl, tau_pass, f_tw, Lambda_tw, f_tr]
|
|
||||||
|
|
||||||
# Slip
|
|
||||||
N_sl: [12]
|
|
||||||
b_sl: [2.56e-10]
|
|
||||||
Q_sl: [3.5e-19]
|
|
||||||
p_sl: [0.325]
|
|
||||||
q_sl: [1.55]
|
|
||||||
B: [0.001]
|
|
||||||
i_sl: [30.0]
|
|
||||||
|
|
||||||
rho_mob_0: [1.0e+12]
|
|
||||||
rho_dip_0: [1.0]
|
|
||||||
|
|
||||||
v_0: [1.0e+4]
|
|
||||||
tau_0: [3.5e+8]
|
|
||||||
D_a: 1.0 # minimum dipole distance / b
|
|
||||||
Q_cl: 4.5e-19 # Activation energy for climb / J
|
|
||||||
|
|
||||||
h_sl-sl: [0.122, 0.122, 0.625, 0.07, 0.137, 0.137, 0.122] # Interaction coefficients (Kubin et al. 2008)
|
|
||||||
h_tw-sl: [0.0] # ToDo: values not known
|
|
||||||
|
|
||||||
# Twin
|
|
||||||
N_tw: [12]
|
|
||||||
b_tw: [1.40e-10]
|
|
||||||
L_tw: 1.8e-7
|
|
||||||
i_tw: 10.0
|
|
||||||
t_tw: [5.0e-8]
|
|
||||||
p_tw: [3.0] # A
|
|
||||||
|
|
||||||
h_tw-tw: [0.0, 1.0] # ToDo: values not known
|
|
||||||
h_sl-tw: [0.0, 1.0, 1.0] # ToDo: values not known
|
|
||||||
|
|
||||||
# Transformation
|
|
||||||
N_tr: [12]
|
|
||||||
b_tr: [1.40e-10]
|
|
||||||
L_tr: 1.8e-7
|
|
||||||
i_tr: 3.0
|
|
||||||
t_tr: [1.0e-7]
|
|
||||||
p_tr: [3.0] # B
|
|
||||||
V_mol: 7.09e-6
|
|
||||||
Delta_G: 1.33343932e+02
|
|
||||||
Delta_G,T: 2.56640412
|
|
||||||
Delta_G,T^2: 1.49524179e-03
|
|
||||||
|
|
||||||
h_tr-tr: [1.0, 1.0] # guessing
|
|
||||||
h_sl-tr: [0.0, 1.0, 1.0] # guessing
|
|
||||||
|
|
||||||
# Twin & Transformation
|
|
||||||
T_ref: 298.15
|
|
||||||
Gamma_sf: 2.89394017e-02
|
|
||||||
Gamma_sf,T: 1.22823814e-04
|
|
||||||
Gamma_sf,T^2: 1.47322968e-07
|
|
||||||
x_c: 1.0e-9
|
|
||||||
V_cs: 1.67e-29
|
|
||||||
|
|
||||||
a_cF: 3.62e-10
|
|
||||||
c/a_hP: 1.633
|
|
||||||
|
|
||||||
# Slip & Twin & Transformation
|
|
||||||
D: 2.0e-5
|
|
|
@ -80,4 +80,4 @@ commercialFEM:
|
||||||
|
|
||||||
generic:
|
generic:
|
||||||
random_seed: 0 # fixed seeding for pseudo-random number generator, Default 0: use random seed.
|
random_seed: 0 # fixed seeding for pseudo-random number generator, Default 0: use random seed.
|
||||||
residualStiffness: 1.0e-6 # non-zero residual damage.
|
phi_min: 1.0e-6 # non-zero residual damage.
|
||||||
|
|
|
@ -4,10 +4,11 @@ references:
|
||||||
- R.H. Bogaard et al.,
|
- R.H. Bogaard et al.,
|
||||||
Thermochimica Acta 218:373-393, 1993,
|
Thermochimica Acta 218:373-393, 1993,
|
||||||
https://doi.org/10.1016/0040-6031(93)80437-F,
|
https://doi.org/10.1016/0040-6031(93)80437-F,
|
||||||
fit to Fig. 6 (T_min=100K, T_max=1400K)
|
fit to Fig. 6 (T_min=100K, T_max=1200K)
|
||||||
|
|
||||||
A_11: 2.068e-08
|
Alpha_11: 14.9e-6
|
||||||
A_11,T: 1.579e-09
|
Alpha_11,T: 1.838e-08
|
||||||
A_11,T^2: 3.449e-13
|
Alpha_11,T^2: -2.028e-11
|
||||||
|
Alpha_11,T^3: 9.173e-15
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
|
@ -4,4 +4,4 @@ references:
|
||||||
- https://en.wikipedia.org/wiki/Thermal_expansion,
|
- https://en.wikipedia.org/wiki/Thermal_expansion,
|
||||||
293.15K
|
293.15K
|
||||||
|
|
||||||
A_11: 23.1e-6
|
Alpha_11: 23.1e-6
|
||||||
|
|
|
@ -4,4 +4,4 @@ references:
|
||||||
- https://en.wikipedia.org/wiki/Thermal_expansion,
|
- https://en.wikipedia.org/wiki/Thermal_expansion,
|
||||||
293.15K
|
293.15K
|
||||||
|
|
||||||
A_11: 14.e-6
|
Alpha_11: 14.e-6
|
||||||
|
|
|
@ -4,8 +4,8 @@ references:
|
||||||
- https://commons.wikimedia.org/wiki/File:Coefficient_dilatation_lineique_aciers.svg,
|
- https://commons.wikimedia.org/wiki/File:Coefficient_dilatation_lineique_aciers.svg,
|
||||||
fit to image description (Scilab code)
|
fit to image description (Scilab code)
|
||||||
|
|
||||||
A_11: 12.70371e-6
|
Alpha_11: 10.2e-6
|
||||||
A_11,T: 7.54e-9
|
Alpha_11,T: 1.260e-08
|
||||||
A_11,T^2: -1.0e-11
|
Alpha_11,T^2: -1.000e-11
|
||||||
|
|
||||||
T_ref: 273.0
|
T_ref: 293.15
|
||||||
|
|
|
@ -4,4 +4,4 @@ references:
|
||||||
- https://en.wikipedia.org/wiki/Thermal_expansion,
|
- https://en.wikipedia.org/wiki/Thermal_expansion,
|
||||||
293.15K
|
293.15K
|
||||||
|
|
||||||
A_11: 17.e-6
|
Alpha_11: 17.e-6
|
||||||
|
|
|
@ -4,4 +4,4 @@ references:
|
||||||
- https://en.wikipedia.org/wiki/Thermal_expansion,
|
- https://en.wikipedia.org/wiki/Thermal_expansion,
|
||||||
293.15K
|
293.15K
|
||||||
|
|
||||||
A_11: 11.8e-6
|
Alpha_11: 11.8e-6
|
||||||
|
|
|
@ -0,0 +1,16 @@
|
||||||
|
type: thermalexpansion
|
||||||
|
|
||||||
|
references:
|
||||||
|
- Z. Li and R.C. Bradt,
|
||||||
|
Journal of the American Ceramic Society 69(12):863-866, 1986,
|
||||||
|
https://doi.org/10.1111/j.1151-2916.1986.tb07385.x
|
||||||
|
|
||||||
|
Alpha_11: 3.27e-6
|
||||||
|
Alpha_11,T: 3.25e-9
|
||||||
|
Alpha_11,T^2: -1.36e-12
|
||||||
|
|
||||||
|
Alpha_33: 3.18e-6
|
||||||
|
Alpha_33,T: 2.48e-9
|
||||||
|
Alpha_33,T^2: -8.51e-13
|
||||||
|
|
||||||
|
T_ref: 273.15
|
|
@ -0,0 +1,12 @@
|
||||||
|
type: thermalexpansion
|
||||||
|
|
||||||
|
references:
|
||||||
|
- Z. Li and R.C. Bradt,
|
||||||
|
Journal of Materials Science 21:4366-4368, 1986,
|
||||||
|
https://doi.org/10.1007/BF01106557
|
||||||
|
|
||||||
|
Alpha_11: 3.19e-6
|
||||||
|
Alpha_11,T: 3.60e-9
|
||||||
|
Alpha_11,T^2: -1.68e-12
|
||||||
|
|
||||||
|
T_ref: 273.15
|
|
@ -6,12 +6,12 @@ references:
|
||||||
https://doi.org/10.1107/S0365110X62000742,
|
https://doi.org/10.1107/S0365110X62000742,
|
||||||
fit to Tab. 2 (T_min=30ºC, T_max=210ºC)
|
fit to Tab. 2 (T_min=30ºC, T_max=210ºC)
|
||||||
|
|
||||||
A_11: 1.639e-05
|
Alpha_11: 16.4e-6
|
||||||
A_11,T: 1.799e-08
|
Alpha_11,T: 1.799e-08
|
||||||
A_11,T^2: 1.734e-10
|
Alpha_11,T^2: 1.734e-10
|
||||||
|
|
||||||
A_33: 3.263e-05
|
Alpha_33: 32.6e-6
|
||||||
A_33,T: 1.387e-08
|
Alpha_33,T: 1.387e-08
|
||||||
A_33,T^2: 5.794e-10
|
Alpha_33,T^2: 5.794e-10
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
|
@ -4,4 +4,4 @@ references:
|
||||||
- https://en.wikipedia.org/wiki/Thermal_expansion,
|
- https://en.wikipedia.org/wiki/Thermal_expansion,
|
||||||
293.15K
|
293.15K
|
||||||
|
|
||||||
A_11: 4.5e-6
|
Alpha_11: 4.5e-6
|
||||||
|
|
|
@ -2,9 +2,9 @@ type: thermalexpansion
|
||||||
|
|
||||||
references:
|
references:
|
||||||
- https://commons.wikimedia.org/wiki/File:Coefficient_dilatation_lineique_aciers.svg,
|
- https://commons.wikimedia.org/wiki/File:Coefficient_dilatation_lineique_aciers.svg,
|
||||||
fit to image description (Scilab code)
|
fit to Scilab code for generating the image (T_min=100ºC, T_max=400ºC)
|
||||||
|
|
||||||
A_11: 11.365e-6
|
Alpha_11: 10.1e-6
|
||||||
A_11,T: 5.0e-9
|
Alpha_11,T: 5.000e-09
|
||||||
|
|
||||||
T_ref: 273.0
|
T_ref: 293.15
|
||||||
|
|
|
@ -3,21 +3,23 @@ type: Hooke
|
||||||
references:
|
references:
|
||||||
- J.R. Neighbours and G.A. Alers,
|
- J.R. Neighbours and G.A. Alers,
|
||||||
Physical Review 111:707-712, 1958,
|
Physical Review 111:707-712, 1958,
|
||||||
https://doi.org/10.1103/PhysRev.111.707
|
https://doi.org/10.1103/PhysRev.111.707,
|
||||||
|
fit to Tab. I (T_min=100K, T_max=300K)
|
||||||
- Y.A. Chang and L. Himmel,
|
- Y.A. Chang and L. Himmel,
|
||||||
Journal of Applied Physics 37:3567-3572, 1966,
|
Journal of Applied Physics 37:3567-3572, 1966,
|
||||||
https://doi.org/10.1063/1.1708903
|
https://doi.org/10.1063/1.1708903,
|
||||||
|
fit to Tab. II (T_min=300K, T_max=800K)
|
||||||
|
|
||||||
C_11: 122.9e+9
|
C_11: 124.1e+9
|
||||||
C_11,T: -313.5e+5
|
C_11,T: -3.148e+7
|
||||||
C_11,T^2: -107.3e+2
|
C_11,T^2: -6.594e+3
|
||||||
|
|
||||||
C_12: 91.55e+9
|
C_12: 93.7e+9
|
||||||
C_12,T: -164.1e+5
|
C_12,T: -1.657e+7
|
||||||
C_12,T^2: -681.6e+1
|
C_12,T^2: -4.220e+3
|
||||||
|
|
||||||
C_44: 42.63e+9
|
C_44: 46.4e+9
|
||||||
C_44,T: -180.5e+5
|
C_44,T: -1.775e+7
|
||||||
C_44,T^2: -353.8e+1
|
C_44,T^2: -1.973e+3
|
||||||
|
|
||||||
T_ref: 300
|
T_ref: 293.15
|
||||||
|
|
|
@ -6,20 +6,20 @@ references:
|
||||||
https://doi.org/10.1063/1.1713309,
|
https://doi.org/10.1063/1.1713309,
|
||||||
fit to Tab. I (T_min=100K, T_max=300K)
|
fit to Tab. I (T_min=100K, T_max=300K)
|
||||||
- D. Gerlich and E.S. Fisher,
|
- D. Gerlich and E.S. Fisher,
|
||||||
Journal of Physics and Chemistry of Solids 30:1197-1205, 1969
|
Journal of Physics and Chemistry of Solids 30:1197-1205, 1969,
|
||||||
https://doi.org/10.1016/0022-3697(69)90377-1,
|
https://doi.org/10.1016/0022-3697(69)90377-1,
|
||||||
fit to Tab. 2 (T_min=293K, T_max=900K)
|
fit to Tab. 2 (T_min=293K, T_max=900K)
|
||||||
|
|
||||||
C_11: 106.9e+9
|
C_11: 106.9e+9
|
||||||
C_11,T: -3.685e+7
|
C_11,T: -3.691e+7
|
||||||
C_11,T^2: -1.016e+4
|
C_11,T^2: -9.790e+3
|
||||||
|
|
||||||
C_12: 60.55e+9
|
C_12: 60.5e+9
|
||||||
C_12,T: -8.307e+6
|
C_12,T: -8.412e+6
|
||||||
C_12,T^2: -4.353e+3
|
C_12,T^2: -3.972e+3
|
||||||
|
|
||||||
C_44: 28.37e+9
|
C_44: 28.4e+9
|
||||||
C_44,T: -1.418e+7
|
C_44,T: -1.413e+7
|
||||||
C_44,T^2: -3.253e+3
|
C_44,T^2: -3.408e+3
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
|
@ -1,11 +1,25 @@
|
||||||
type: Hooke
|
type: Hooke
|
||||||
|
|
||||||
references:
|
references:
|
||||||
- J.P. Hirth and J. Lothe,
|
- J.R. Neighbours and G.A. Alers,
|
||||||
Theory of Dislocations, 1982,
|
Physical Review 111:707-712, 1958,
|
||||||
John Wiley & Sons,
|
https://doi.org/10.1103/PhysRev.111.707,
|
||||||
page 837
|
fit to Tab. II (T_min=100K, T_max=300K)
|
||||||
|
- Y.A. Chang and L. Himmel,
|
||||||
|
Journal of Applied Physics 37:3567-3572, 1966,
|
||||||
|
https://doi.org/10.1063/1.1708903,
|
||||||
|
fit to Tab. III (T_min=300K, T_max=800K)
|
||||||
|
|
||||||
C_11: 186.e+9
|
C_11: 192.7e+9
|
||||||
C_12: 157.e+9
|
C_11,T: -3.472e+7
|
||||||
C_44: 42.e+9
|
C_11,T^2: 1.102e+3
|
||||||
|
|
||||||
|
C_12: 163.2e+9
|
||||||
|
C_12,T: -2.607e+7
|
||||||
|
C_12,T^2: 2.397e+3
|
||||||
|
|
||||||
|
C_44: 42.2e+9
|
||||||
|
C_44,T: -1.172e+7
|
||||||
|
C_44,T^2: -3.078e+3
|
||||||
|
|
||||||
|
T_ref: 293.15
|
||||||
|
|
|
@ -1,21 +1,25 @@
|
||||||
type: Hooke
|
type: Hooke
|
||||||
|
|
||||||
references:
|
references:
|
||||||
- W.C. Overton, Jr. and J. Gaffney,
|
- W.C. Overton Jr. and J. Gaffney,
|
||||||
Physical Review 98(4):969-977, 1955,
|
Physical Review 98(4):969-977, 1955,
|
||||||
https://doi.org/10.1103/PhysRev.98.969,
|
https://doi.org/10.1103/PhysRev.98.969,
|
||||||
fit to Tab. I (T_min=100K, T_max=300K)
|
fit to Tab. I (T_min=100K, T_max=300K)
|
||||||
|
- Y.A. Chang and L. Himmel,
|
||||||
|
Journal of Applied Physics 37:3567-3572, 1966,
|
||||||
|
https://doi.org/10.1063/1.1708903,
|
||||||
|
fit to Tab. II (T_min=300K, T_max=800K)
|
||||||
|
|
||||||
C_11: 168.6e+9
|
C_11: 168.9e+9
|
||||||
C_11,T: -3.779e+7
|
C_11,T: -3.332e+7
|
||||||
C_11,T^2: -2.536e+4
|
C_11,T^2: -1.074e+4
|
||||||
|
|
||||||
C_12: 121.5e+9
|
C_12: 121.8e+9
|
||||||
C_12,T: -1.632e+7
|
C_12,T: -1.402e+7
|
||||||
C_12,T^2: -1.116e+4
|
C_12,T^2: -9.003e+3
|
||||||
|
|
||||||
C_44: 75.59e+9
|
C_44: 75.8e+9
|
||||||
C_44,T: -2.912e+7
|
C_44,T: -2.555e+7
|
||||||
C_44,T^2: -1.669e+4
|
C_44,T^2: -2.188e+3
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
|
@ -6,16 +6,16 @@ references:
|
||||||
https://doi.org/10.1063/1.1661710
|
https://doi.org/10.1063/1.1661710
|
||||||
fit to Tab. II (T_min=25ºC, T_max=880ºC)
|
fit to Tab. II (T_min=25ºC, T_max=880ºC)
|
||||||
|
|
||||||
C_11: 232.1e+9
|
C_11: 232.2e+9
|
||||||
C_11,T: -4.678e+7
|
C_11,T: -4.683e+7
|
||||||
C_11,T^2: -5.762e+4
|
C_11,T^2: -5.988e+4
|
||||||
|
|
||||||
C_12: 135.9e+9
|
C_12: 136.4e+9
|
||||||
C_12,T: -1.695e+7
|
C_12,T: -1.970e+7
|
||||||
C_12,T^2: 1.555e+3
|
C_12,T^2: 3.760e+3
|
||||||
|
|
||||||
C_44: 117.0e+9
|
C_44: 117.0e+9
|
||||||
C_44,T: -2.047e+7
|
C_44,T: -2.015e+7
|
||||||
C_44,T^2: -2.814e+2
|
C_44,T^2: -7.485e+2
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
|
@ -4,18 +4,15 @@ references:
|
||||||
- Wang et al.,
|
- Wang et al.,
|
||||||
Materials Science and Engineering:A 674:406-412, 2016,
|
Materials Science and Engineering:A 674:406-412, 2016,
|
||||||
https://doi.org/10.1016/j.msea.2016.08.010,
|
https://doi.org/10.1016/j.msea.2016.08.010,
|
||||||
fitted to Tab. 2 (last 3 rows)
|
fit to Tab. 2 (last 3 rows)
|
||||||
|
|
||||||
C_11: 243.3e+9
|
C_11: 243.9e+9
|
||||||
C_11,T: -6.380e+5
|
C_11,T: -5.410e+7
|
||||||
C_11,T^2: -8.362e+4
|
|
||||||
|
|
||||||
C_12: 156.7e+9
|
C_12: 157.0e+9
|
||||||
C_12,T: 2.091e+7
|
C_12,T: -9.352e+6
|
||||||
C_12,T^2: -4.675e+4
|
|
||||||
|
|
||||||
C_44: 117.8e+9
|
C_44: 117.9e+9
|
||||||
C_44,T: -3.800e+7
|
C_44,T: -2.798e+7
|
||||||
C_44,T^2: 1.587e+4
|
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
|
@ -6,23 +6,23 @@ references:
|
||||||
https://doi.org/10.1103/PhysRev.107.972,
|
https://doi.org/10.1103/PhysRev.107.972,
|
||||||
fit to Tab. I (T_min=100K, T_max=300K)
|
fit to Tab. I (T_min=100K, T_max=300K)
|
||||||
|
|
||||||
C_11: 59.50e+9
|
C_11: 59.5e+9
|
||||||
C_11,T: -1.930e+7
|
C_11,T: -1.930e+7
|
||||||
C_11,T^2: -1.215e+4
|
C_11,T^2: -1.215e+4
|
||||||
|
|
||||||
C_33: 61.72e+9
|
C_12: 25.6e+9
|
||||||
C_33,T: -2.175e+7
|
|
||||||
C_33,T^2: -5.624e+3
|
|
||||||
|
|
||||||
C_44: 16.46e+9
|
|
||||||
C_44,T: -1.006e+7
|
|
||||||
C_44,T^2: -7.692e+3
|
|
||||||
|
|
||||||
C_12: 25.62e+9
|
|
||||||
C_12,T: -2.216e+6
|
C_12,T: -2.216e+6
|
||||||
C_12,T^2: -4.138e+3
|
C_12,T^2: -4.138e+3
|
||||||
|
|
||||||
C_13: 21.46e+9
|
C_44: 16.5e+9
|
||||||
|
C_44,T: -1.006e+7
|
||||||
|
C_44,T^2: -7.692e+3
|
||||||
|
|
||||||
|
C_33: 61.7e+9
|
||||||
|
C_33,T: -2.175e+7
|
||||||
|
C_33,T^2: -5.624e+3
|
||||||
|
|
||||||
|
C_13: 21.5e+9
|
||||||
C_13,T: -1.921e+6
|
C_13,T: -1.921e+6
|
||||||
C_13,T^2: -4.283e+3
|
C_13,T^2: -4.283e+3
|
||||||
|
|
||||||
|
|
|
@ -7,15 +7,15 @@ references:
|
||||||
fit to Tab. 2 (T_min=100K, T_max=700K)
|
fit to Tab. 2 (T_min=100K, T_max=700K)
|
||||||
|
|
||||||
C_11: 251.0e+9
|
C_11: 251.0e+9
|
||||||
C_11,T: -4.998e+7
|
C_11,T: -4.967e+7
|
||||||
C_11,T^2: -2.952e+4
|
C_11,T^2: -3.327e+4
|
||||||
|
|
||||||
C_12: 150.0e+9
|
C_12: 150.0e+9
|
||||||
C_12,T: -4.269e+6
|
C_12,T: -3.714e+6
|
||||||
C_12,T^2: -6.429e+3
|
C_12,T^2: -7.414e+3
|
||||||
|
|
||||||
C_44: 123.7e+9
|
C_44: 123.7e+9
|
||||||
C_44,T: -3.618e+7
|
C_44,T: -3.621e+7
|
||||||
C_44,T^2: -7.024e+3
|
C_44,T^2: -8.017e+3
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
|
@ -4,29 +4,24 @@ references:
|
||||||
- J.A. Rayne and B.S. Chandrasekhar,
|
- J.A. Rayne and B.S. Chandrasekhar,
|
||||||
Physical Review 120(5):1658-1663, 1960,
|
Physical Review 120(5):1658-1663, 1960,
|
||||||
https://doi.org/10.1103/PhysRev.120.1658,
|
https://doi.org/10.1103/PhysRev.120.1658,
|
||||||
fit to Fig. 2 (T_min=100K, T_max=300K) and Tab. IV (C_13, T_min=77K, T_max=300K)
|
fit to Tab. IV (T_min=77K, T_max=300K)
|
||||||
|
|
||||||
C_11: 72.90e+9
|
C_11: 72.6e+9
|
||||||
C_11,T: -4.399e+7
|
C_11,T: -4.135e+7
|
||||||
C_11,T^2: -2.645e+4
|
|
||||||
|
|
||||||
C_12: 59.27e+9
|
C_12: 59.4e+9
|
||||||
C_12,T: 1.058e+7
|
C_12,T: 6.726e+6
|
||||||
C_12,T^2: 1.002e+4
|
|
||||||
|
|
||||||
C_13: 35.80e+9
|
C_44: 22.2e+9
|
||||||
|
C_44,T: -1.870e+7
|
||||||
|
|
||||||
|
C_33: 88.8e+9
|
||||||
|
C_33,T: -5.381e+7
|
||||||
|
|
||||||
|
C_13: 35.8e+9
|
||||||
C_13,T: -2.870e+6
|
C_13,T: -2.870e+6
|
||||||
|
|
||||||
C_33: 88.78e+9
|
C_66: 24.1e+9
|
||||||
C_33,T: -5.250e+7
|
C_66,T: -1.709e+7
|
||||||
C_33,T^2: 3.546e+3
|
|
||||||
|
|
||||||
C_44: 22.26e+9
|
|
||||||
C_44,T: -1.982e+7
|
|
||||||
C_44,T^2: -8.711e+3
|
|
||||||
|
|
||||||
C_66: 24.18e+9
|
|
||||||
C_66,T: -1.806e+7
|
|
||||||
C_66,T^2: -4.112e+3
|
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
|
@ -0,0 +1,21 @@
|
||||||
|
type: Hooke
|
||||||
|
|
||||||
|
references:
|
||||||
|
- F.H. Featherston and J.R. Neighbours,
|
||||||
|
Physical Review 130(4):1324-1333, 1963,
|
||||||
|
https://doi.org/10.1103/PhysRev.130.1324,
|
||||||
|
fit to Tab. II (T_min=100K, T_max=300K)
|
||||||
|
|
||||||
|
C_11: 523.6e+9
|
||||||
|
C_11,T: -7.704e+7
|
||||||
|
C_11,T^2: -1.562e+5
|
||||||
|
|
||||||
|
C_12: 204.6e+9
|
||||||
|
C_12,T: -2.485e+7
|
||||||
|
C_12,T^2: -1.182e+5
|
||||||
|
|
||||||
|
C_44: 160.7e+9
|
||||||
|
C_44,T: -1.028e+7
|
||||||
|
C_44,T^2: 1.291e+4
|
||||||
|
|
||||||
|
T_ref: 293.15
|
|
@ -4,30 +4,26 @@ references:
|
||||||
- E.S. Fisher and C.J. Renken,
|
- E.S. Fisher and C.J. Renken,
|
||||||
Physical Review 135(2A):A482-A494, 1964,
|
Physical Review 135(2A):A482-A494, 1964,
|
||||||
https://doi.org/10.1103/PhysRev.135.A482,
|
https://doi.org/10.1103/PhysRev.135.A482,
|
||||||
fit to Tab. IV (T_min=150K, T_max=250K)
|
fit to Tab. IV (T_min=77K, T_max=923K)
|
||||||
- H. Ogi et al.,
|
|
||||||
Acta Materialia 52(7):2075-2080, 2004,
|
|
||||||
https://doi.org/10.1016/j.actamat.2004.01.002,
|
|
||||||
fit to Fig. 3 (T_min=300K, T_max=900K)
|
|
||||||
|
|
||||||
C_11: 162.6e+9
|
C_11: 162.5e+9
|
||||||
C_11,T: -6.150e+7
|
C_11,T: -5.915e+7
|
||||||
C_11,T^2: -5.557e+2
|
C_11,T^2: 1.156e+4
|
||||||
|
|
||||||
C_33: 183.3e+9
|
C_12: 91.8e+9
|
||||||
C_33,T: -1.655e+07
|
C_12,T: 2.192e+7
|
||||||
C_33,T^2: -1.022e+04
|
C_12,T^2: -1.621e+4
|
||||||
|
|
||||||
C_44: 45.80e+9
|
C_44: 46.8e+9
|
||||||
C_44,T: -2.936e+07
|
C_44,T: -1.857e+7
|
||||||
C_44,T^2: 7.120e+02
|
C_44,T^2: -3.745e+3
|
||||||
|
|
||||||
C_12: 89.97e+9
|
C_33: 180.6e+9
|
||||||
C_12,T: 2.776e+6
|
C_33,T: -4.110e+7
|
||||||
C_12,T^2: -2.389e+4
|
C_33,T^2: 7.330e+3
|
||||||
|
|
||||||
C_13: 69.53e+9
|
C_13: 68.9e+9
|
||||||
C_13,T: 1.057e+7
|
C_13,T: 2.965e+6
|
||||||
C_13,T^2: -2.966e+3
|
C_13,T^2: -5.767e+3
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
|
@ -1,20 +1,18 @@
|
||||||
type: Hooke
|
type: Hooke
|
||||||
|
|
||||||
references:
|
references:
|
||||||
- F.H. Featherston and J.R. Nieghbours,
|
- F.H. Featherston and J.R. Neighbours,
|
||||||
Physical Review 130(4):1324-1333,
|
Physical Review 130(4):1324-1333, 1963,
|
||||||
https://doi.org/10.1103/PhysRev.130.1324,
|
https://doi.org/10.1103/PhysRev.130.1324,
|
||||||
fit to Tab. III (T_min=100K, T_max=300K)
|
fit to Tab. III (T_min=100K, T_max=300K)
|
||||||
|
|
||||||
C_11: 523.6e+9
|
C_11: 524.3e+9
|
||||||
C_11,T: -7.607e+7
|
C_11,T: -4.794e+07
|
||||||
C_11,T^2: -1.551e+5
|
|
||||||
|
|
||||||
C_12: 205.1e+9
|
C_12: 205.1e+9
|
||||||
C_12,T: -2.843e+6
|
C_12,T: -2.836e+06
|
||||||
|
|
||||||
C_44: 160.8e+9
|
C_44: 160.7e+9
|
||||||
C_44,T: -1.057e+7
|
C_44,T: -1.269e+07
|
||||||
C_44,T^2: 9.933e+3
|
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
|
@ -26,7 +26,7 @@ h_sl-sl: [0.009, 0.72, 0.009, 0.05, 0.05, 0.06, 0.09]
|
||||||
w: [2.992e-09] # 11b
|
w: [2.992e-09] # 11b
|
||||||
|
|
||||||
# values in Cereceda et al. are high, using parameters from Gröger et al.
|
# values in Cereceda et al. are high, using parameters from Gröger et al.
|
||||||
a_nonSchmid: [0.0, 0.56, 0.75] # Table 2
|
a_nonSchmid: [0.0, 0.56, 0.75] # Tab. 2
|
||||||
|
|
||||||
# (almost) no annhilation, adjustment needed for simulations beyond the yield point
|
# (almost) no annhilation, adjustment needed for simulations beyond the yield point
|
||||||
i_sl: [1] # c, eq. (25)
|
i_sl: [1] # c, eq. (25)
|
||||||
|
|
|
@ -13,7 +13,7 @@ output: [rho_dip, rho_mob]
|
||||||
N_sl: [12, 12]
|
N_sl: [12, 12]
|
||||||
|
|
||||||
b_sl: [2.49e-10, 2.49e-10]
|
b_sl: [2.49e-10, 2.49e-10]
|
||||||
rho_mob_0: [2.81e12, 2.8e+12]
|
rho_mob_0: [2.81e+12, 2.8e+12]
|
||||||
rho_dip_0: [1.0, 1.0] # not given
|
rho_dip_0: [1.0, 1.0] # not given
|
||||||
v_0: [1.4e+3, 1.4e+3]
|
v_0: [1.4e+3, 1.4e+3]
|
||||||
Q_sl: [1.57e-19, 1.57e-19] # Delta_F
|
Q_sl: [1.57e-19, 1.57e-19] # Delta_F
|
||||||
|
|
|
@ -0,0 +1,72 @@
|
||||||
|
type: dislotwin
|
||||||
|
|
||||||
|
references:
|
||||||
|
- S.L. Wong et al.,
|
||||||
|
Acta Materialia 118:140-151, 2016,
|
||||||
|
https://doi.org/10.1016/j.actamat.2016.07.032
|
||||||
|
- K. Sedighiani et al.,
|
||||||
|
Mechanics of Materials, 164:104117, 2022,
|
||||||
|
https://doi.org/10.1016/j.mechmat.2021.104117
|
||||||
|
- L. Kubin et al.,
|
||||||
|
Acta Materialia 56:6040-6049,
|
||||||
|
https://doi.org/10.1016/j.actamat.2008.08.012
|
||||||
|
|
||||||
|
output: [rho_mob, rho_dip, gamma_sl, Lambda_sl, tau_pass, f_tw, Lambda_tw, f_tr]
|
||||||
|
|
||||||
|
# Glide
|
||||||
|
N_sl: [12]
|
||||||
|
b_sl: [2.56e-10] # a/sqrt(2)
|
||||||
|
Q_sl: [3.5e-19]
|
||||||
|
p_sl: [0.325]
|
||||||
|
q_sl: [1.55]
|
||||||
|
B: [0.001]
|
||||||
|
i_sl: [30.0]
|
||||||
|
v_0: [1.4e+3]
|
||||||
|
tau_0: [5.5e+8] # adjusted
|
||||||
|
D_a: 2.0
|
||||||
|
Q_cl: 3.0e-19
|
||||||
|
|
||||||
|
rho_mob_0: [5.0e+10]
|
||||||
|
rho_dip_0: [5.0e+10]
|
||||||
|
|
||||||
|
h_sl-sl: [0.122, 0.122, 0.625, 0.07, 0.137, 0.137, 0.122]
|
||||||
|
|
||||||
|
# Twin
|
||||||
|
N_tw: [12]
|
||||||
|
b_tw: [1.47e-10] # a_cF/sqrt(6)
|
||||||
|
L_tw: 1.91e-7 # 1300 *b_tw
|
||||||
|
i_tw: 10.0
|
||||||
|
t_tw: [5.0e-8]
|
||||||
|
p_tw: [7] # A, adjusted
|
||||||
|
|
||||||
|
h_tw-tw: [1.0, 1.0]
|
||||||
|
h_sl-tw: [1.0, 1.0, 1.0]
|
||||||
|
|
||||||
|
# Transformation
|
||||||
|
N_tr: [12]
|
||||||
|
b_tr: [1.47e-10] # a_cF/sqrt(6)
|
||||||
|
L_tr: 2.21e-7 # 1500 *b_tr
|
||||||
|
i_tr: 10.0 # adjusted
|
||||||
|
t_tr: [1.0e-7]
|
||||||
|
p_tr: [4] # B, adjusted
|
||||||
|
V_mol: 7.09e-6
|
||||||
|
c/a_hP: 1.633
|
||||||
|
|
||||||
|
Delta_G: 1.2055e+2
|
||||||
|
Delta_G,T: 2.5515
|
||||||
|
Delta_G,T^2: 1.4952e-3
|
||||||
|
|
||||||
|
h_tr-tr: [1.0, 1.0]
|
||||||
|
h_sl-tr: [1.5, 1.5, 1.5]
|
||||||
|
|
||||||
|
# Twin & Transformation
|
||||||
|
T_ref: 293.15
|
||||||
|
Gamma_sf: 2.833e-2
|
||||||
|
Gamma_sf,T: 1.214e-4
|
||||||
|
Gamma_sf,T^2: 1.473e-7
|
||||||
|
|
||||||
|
x_c: 1.0e-9
|
||||||
|
V_cs: 1.67e-29
|
||||||
|
|
||||||
|
# Slip & Twin & Transformation
|
||||||
|
D: 5.0e-5
|
|
@ -40,7 +40,7 @@ nu_a: 50.e+9
|
||||||
B: 1.e-2
|
B: 1.e-2
|
||||||
f_ed: 1.0 # k_3
|
f_ed: 1.0 # k_3
|
||||||
|
|
||||||
h_sl-sl: [0, 0, 0.625, 0.07, 0.137, 0.137, 0.122] # Table 3.4
|
h_sl-sl: [0, 0, 0.625, 0.07, 0.137, 0.137, 0.122] # Tab. 3.4
|
||||||
|
|
||||||
chi_GB: 0.0 # full blocking at GB
|
chi_GB: 0.0 # full blocking at GB
|
||||||
chi_surface: 1.0 # no blocking at surface
|
chi_surface: 1.0 # no blocking at surface
|
||||||
|
|
|
@ -40,7 +40,7 @@ nu_a: 50.e+9
|
||||||
B: 1.e-3
|
B: 1.e-3
|
||||||
f_ed: 0.01 # k_3
|
f_ed: 0.01 # k_3
|
||||||
|
|
||||||
h_sl-sl: [0, 0, 0.625, 0.07, 0.137, 0.137, 0.122] # Table 3.4
|
h_sl-sl: [0, 0, 0.625, 0.07, 0.137, 0.137, 0.122] # Tab. 3.4
|
||||||
|
|
||||||
chi_GB: 0.0 # full blocking at GB
|
chi_GB: 0.0 # full blocking at GB
|
||||||
chi_surface: 1.0 # no blocking at surface
|
chi_surface: 1.0 # no blocking at surface
|
||||||
|
|
|
@ -7,9 +7,11 @@ references:
|
||||||
|
|
||||||
output: [T]
|
output: [T]
|
||||||
|
|
||||||
K_11: 2.380e+2
|
K_11: 2.374e+2
|
||||||
K_11,T: 2.068e-3
|
K_11,T: 8.952e-3
|
||||||
K_11,T^2: -7.765e-5
|
K_11,T^2: 2.650e-5
|
||||||
|
K_11,T^3: -5.687e-7
|
||||||
|
K_11,T^4: 6.407e-10
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
||||||
|
|
|
@ -2,14 +2,16 @@ references:
|
||||||
- J.G. Hust and A.B. Lankford,
|
- J.G. Hust and A.B. Lankford,
|
||||||
Thermal Conductivity of Aluminum, Copper, Iron, and Tungsten from 1K to the Melting Point,
|
Thermal Conductivity of Aluminum, Copper, Iron, and Tungsten from 1K to the Melting Point,
|
||||||
US Department of Commerce, Boulder, Colorado, 1984,
|
US Department of Commerce, Boulder, Colorado, 1984,
|
||||||
fit to Tab. 2.4.1 (RRR=1000, T_min=200K, T_max=1000K)
|
fit to Tab. 2.4.1 (RRR=300, T_min=150K, T_max=1000K)
|
||||||
- https://www.mit.edu/~6.777/matprops/copper.htm
|
- https://www.mit.edu/~6.777/matprops/copper.htm
|
||||||
|
|
||||||
output: [T]
|
output: [T]
|
||||||
|
|
||||||
K_11: 4.039e+2
|
K_11: 4.005e+2
|
||||||
K_11,T: -8.119e-2
|
K_11,T: -1.075e-1
|
||||||
K_11,T^2: 1.454e-5
|
K_11,T^2: 3.293e-4
|
||||||
|
K_11,T^3: -7.533e-7
|
||||||
|
K_11,T^4: 5.223e-10
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
||||||
|
|
|
@ -2,14 +2,15 @@ references:
|
||||||
- J.G. Hust and A.B. Lankford,
|
- J.G. Hust and A.B. Lankford,
|
||||||
Thermal Conductivity of Aluminum, Copper, Iron, and Tungsten from 1K to the Melting Point,
|
Thermal Conductivity of Aluminum, Copper, Iron, and Tungsten from 1K to the Melting Point,
|
||||||
US Department of Commerce, Boulder, Colorado, 1984,
|
US Department of Commerce, Boulder, Colorado, 1984,
|
||||||
fit to Tab. 4.4.1 (RRR=300, T_min=200K, T_max=1000K)
|
fit to Tab. 4.4.1 (RRR=300, T_min=150K, T_max=1000K)
|
||||||
- https://www.engineeringtoolbox.com/specific-heat-metals-d_152.html
|
- https://www.engineeringtoolbox.com/specific-heat-metals-d_152.html
|
||||||
|
|
||||||
output: [T]
|
output: [T]
|
||||||
|
|
||||||
K_11: 8.055e+1
|
K_11: 8.034e+1
|
||||||
K_11,T: -1.051e-1
|
K_11,T: -1.216e-1
|
||||||
K_11,T^2: 5.464e-5
|
K_11,T^2: 1.327e-4
|
||||||
|
K_11,T^3: -7.993e-8
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
||||||
|
|
|
@ -2,14 +2,16 @@ references:
|
||||||
- Y.S. Touloukian et al.,
|
- Y.S. Touloukian et al.,
|
||||||
TPRC Data Series Volume 1. Thermal conductivity - metallic elements and alloys,
|
TPRC Data Series Volume 1. Thermal conductivity - metallic elements and alloys,
|
||||||
IFI/Plenum, 1970,
|
IFI/Plenum, 1970,
|
||||||
fit to Tab. 35R (T_min=150K, T_max=500K)
|
fit to Tab. 35R (T_min=80K, T_max=500K)
|
||||||
- https://www.engineeringtoolbox.com/specific-heat-metals-d_152.html
|
- https://www.engineeringtoolbox.com/specific-heat-metals-d_152.html
|
||||||
|
|
||||||
output: [T]
|
output: [T]
|
||||||
|
|
||||||
K_11: 9.132e+1
|
K_11: 9.311e+1
|
||||||
K_11,T: -1.525e-1
|
K_11,T: -8.719e-2
|
||||||
K_11,T^2: 3.053e-4
|
K_11,T^2: -3.793e-4
|
||||||
|
K_11,T^3: -4.003e-6
|
||||||
|
K_11,T^4: 2.676e-8
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
||||||
|
|
|
@ -2,18 +2,22 @@ references:
|
||||||
- Y.S. Touloukian et al.,
|
- Y.S. Touloukian et al.,
|
||||||
TPRC Data Series Volume 1. Thermal conductivity - metallic elements and alloys,
|
TPRC Data Series Volume 1. Thermal conductivity - metallic elements and alloys,
|
||||||
IFI/Plenum, 1970,
|
IFI/Plenum, 1970,
|
||||||
fit to Tab. 61R (T_min=100K, T_max=400K)
|
fit to Tab. 61R (T_min=80K, T_max=500K)
|
||||||
- https://www.engineeringtoolbox.com/specific-heat-metals-d_152.html
|
- https://www.engineeringtoolbox.com/specific-heat-metals-d_152.html
|
||||||
|
|
||||||
output: [T]
|
output: [T]
|
||||||
|
|
||||||
K_11: 7.414e+1
|
K_11: 7.495e+1
|
||||||
K_11,T: -6.465e-2
|
K_11,T: -5.646e-2
|
||||||
K_11,T^2: 2.066e-4
|
K_11,T^2: 1.420e-5
|
||||||
|
K_11,T^3: -5.390e-7
|
||||||
|
K_11,T^4: 4.012e-9
|
||||||
|
|
||||||
K_33: 5.147e+1
|
K_33: 5.204e+1
|
||||||
K_33,T: -4.506e-2
|
K_33,T: -3.940e-2
|
||||||
K_33,T^2: 1.435e-4
|
K_33,T^2: 7.037e-6
|
||||||
|
K_33,T^3: -3.738e-7
|
||||||
|
K_33,T^4: 2.873e-9
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
||||||
|
|
|
@ -2,14 +2,16 @@ references:
|
||||||
- J.G. Hust and A.B. Lankford,
|
- J.G. Hust and A.B. Lankford,
|
||||||
Thermal Conductivity of Aluminum, Copper, Iron, and Tungsten from 1K to the Melting Point,
|
Thermal Conductivity of Aluminum, Copper, Iron, and Tungsten from 1K to the Melting Point,
|
||||||
US Department of Commerce, Boulder, Colorado, 1984,
|
US Department of Commerce, Boulder, Colorado, 1984,
|
||||||
fit to Tab. 5.4.1 (RRR=300, T_min=200K, T_max=1000K)
|
fit to Tab. 5.4.1 (RRR=300, T_min=100K, T_max=2000K)
|
||||||
- https://www.mit.edu/~6.777/matprops/tungsten.htm
|
- https://www.mit.edu/~6.777/matprops/tungsten.htm
|
||||||
|
|
||||||
output: [T]
|
output: [T]
|
||||||
|
|
||||||
K_11: 1.758e+2
|
K_11: 1.750e+2
|
||||||
K_11,T: -1.605e-1
|
K_11,T: -1.809e-1
|
||||||
K_11,T^2: 1.160e-4
|
K_11,T^2: 2.257e-4
|
||||||
|
K_11,T^3: -1.395e-7
|
||||||
|
K_11,T^4: 3.192e-11
|
||||||
|
|
||||||
T_ref: 293.15
|
T_ref: 293.15
|
||||||
|
|
||||||
|
|
|
@ -1,4 +1,4 @@
|
||||||
type: externalheat
|
type: externalheat
|
||||||
|
|
||||||
f_T: [1, 1, 0, 0]
|
f: [1, 1, 0, 0]
|
||||||
t_n: [0, 500, 500.001, 1000]
|
t: [0, 500, 500.001, 1000]
|
||||||
|
|
|
@ -46,7 +46,7 @@
|
||||||
+
|
+
|
||||||
+# determine DAMASK version
|
+# determine DAMASK version
|
||||||
+if test -n "$DAMASK_USER"; then
|
+if test -n "$DAMASK_USER"; then
|
||||||
+ DAMASKROOT=`dirname $DAMASK_USER`/..
|
+ DAMASKROOT=`dirname $DAMASK_USER`/../..
|
||||||
+ read DAMASKVERSION < $DAMASKROOT/VERSION
|
+ read DAMASKVERSION < $DAMASKROOT/VERSION
|
||||||
+ DAMASKVERSION="'"$DAMASKVERSION"'"
|
+ DAMASKVERSION="'"$DAMASKVERSION"'"
|
||||||
+else
|
+else
|
||||||
|
|
|
@ -251,7 +251,7 @@
|
||||||
- usersub=$usersubname
|
- usersub=$usersubname
|
||||||
- fi
|
- fi
|
||||||
-
|
-
|
||||||
+ userobj=$usermoext.o
|
+ userobj=$usernoext.o
|
||||||
fi
|
fi
|
||||||
cat > $jid.runmarcscript << END4
|
cat > $jid.runmarcscript << END4
|
||||||
if test "$user"
|
if test "$user"
|
||||||
|
|
|
@ -251,7 +251,7 @@
|
||||||
- usersub=$usersubname
|
- usersub=$usersubname
|
||||||
- fi
|
- fi
|
||||||
-
|
-
|
||||||
+ userobj=$usermoext.o
|
+ userobj=$usernoext.o
|
||||||
fi
|
fi
|
||||||
cat > $jid.runmarcscript << END4
|
cat > $jid.runmarcscript << END4
|
||||||
if test "$user"
|
if test "$user"
|
||||||
|
|
|
@ -251,7 +251,7 @@
|
||||||
- usersub=$usersubname
|
- usersub=$usersubname
|
||||||
- fi
|
- fi
|
||||||
-
|
-
|
||||||
+ userobj=$usermoext.o
|
+ userobj=$usernoext.o
|
||||||
fi
|
fi
|
||||||
cat > $jid.runmarcscript << END4
|
cat > $jid.runmarcscript << END4
|
||||||
if test "$user"
|
if test "$user"
|
||||||
|
|
|
@ -66,7 +66,7 @@
|
||||||
+ label {
|
+ label {
|
||||||
+ position -32 +6
|
+ position -32 +6
|
||||||
+ size 12 6
|
+ size 12 6
|
||||||
+ text "O2 / OpenMP"
|
+ text "O3 / OpenMP"
|
||||||
+ border_width 1
|
+ border_width 1
|
||||||
+ border_color black
|
+ border_color black
|
||||||
+ }
|
+ }
|
||||||
|
|
|
@ -46,7 +46,7 @@
|
||||||
+
|
+
|
||||||
+# determine DAMASK version
|
+# determine DAMASK version
|
||||||
+if test -n "$DAMASK_USER"; then
|
+if test -n "$DAMASK_USER"; then
|
||||||
+ DAMASKROOT=`dirname $DAMASK_USER`/..
|
+ DAMASKROOT=`dirname $DAMASK_USER`/../..
|
||||||
+ read DAMASKVERSION < $DAMASKROOT/VERSION
|
+ read DAMASKVERSION < $DAMASKROOT/VERSION
|
||||||
+ DAMASKVERSION="'"$DAMASKVERSION"'"
|
+ DAMASKVERSION="'"$DAMASKVERSION"'"
|
||||||
+else
|
+else
|
||||||
|
|
|
@ -284,7 +284,7 @@
|
||||||
- usersub=$usersubname
|
- usersub=$usersubname
|
||||||
- fi
|
- fi
|
||||||
-
|
-
|
||||||
+ userobj=$usermoext.o
|
+ userobj=$usernoext.o
|
||||||
fi
|
fi
|
||||||
cat > $jid.runmarcscript << END4
|
cat > $jid.runmarcscript << END4
|
||||||
if test "$user"
|
if test "$user"
|
||||||
|
|
|
@ -284,7 +284,7 @@
|
||||||
- usersub=$usersubname
|
- usersub=$usersubname
|
||||||
- fi
|
- fi
|
||||||
-
|
-
|
||||||
+ userobj=$usermoext.o
|
+ userobj=$usernoext.o
|
||||||
fi
|
fi
|
||||||
cat > $jid.runmarcscript << END4
|
cat > $jid.runmarcscript << END4
|
||||||
if test "$user"
|
if test "$user"
|
||||||
|
|
|
@ -284,7 +284,7 @@
|
||||||
- usersub=$usersubname
|
- usersub=$usersubname
|
||||||
- fi
|
- fi
|
||||||
-
|
-
|
||||||
+ userobj=$usermoext.o
|
+ userobj=$usernoext.o
|
||||||
fi
|
fi
|
||||||
cat > $jid.runmarcscript << END4
|
cat > $jid.runmarcscript << END4
|
||||||
if test "$user"
|
if test "$user"
|
||||||
|
|
|
@ -65,7 +65,7 @@
|
||||||
+ label {
|
+ label {
|
||||||
+ position -32 +6
|
+ position -32 +6
|
||||||
+ size 12 6
|
+ size 12 6
|
||||||
+ text "O2 / OpenMP"
|
+ text "O3 / OpenMP"
|
||||||
+ border_width 1
|
+ border_width 1
|
||||||
+ border_color black
|
+ border_color black
|
||||||
+ }
|
+ }
|
||||||
|
|
|
@ -50,7 +50,7 @@
|
||||||
|
|
||||||
+# determine DAMASK version
|
+# determine DAMASK version
|
||||||
+if test -n "$DAMASK_USER"; then
|
+if test -n "$DAMASK_USER"; then
|
||||||
+ DAMASKROOT=`dirname $DAMASK_USER`/..
|
+ DAMASKROOT=`dirname $DAMASK_USER`/../..
|
||||||
+ read DAMASKVERSION < $DAMASKROOT/VERSION
|
+ read DAMASKVERSION < $DAMASKROOT/VERSION
|
||||||
+ DAMASKVERSION="'"$DAMASKVERSION"'"
|
+ DAMASKVERSION="'"$DAMASKVERSION"'"
|
||||||
+else
|
+else
|
||||||
|
|
|
@ -283,7 +283,7 @@
|
||||||
- usersub=$usersubname
|
- usersub=$usersubname
|
||||||
- fi
|
- fi
|
||||||
-
|
-
|
||||||
+ userobj=$usermoext.o
|
+ userobj=$usernoext.o
|
||||||
fi
|
fi
|
||||||
cat > $jid.runmarcscript << END4
|
cat > $jid.runmarcscript << END4
|
||||||
if test "$user"
|
if test "$user"
|
||||||
|
|
|
@ -283,7 +283,7 @@
|
||||||
- usersub=$usersubname
|
- usersub=$usersubname
|
||||||
- fi
|
- fi
|
||||||
-
|
-
|
||||||
+ userobj=$usermoext.o
|
+ userobj=$usernoext.o
|
||||||
fi
|
fi
|
||||||
cat > $jid.runmarcscript << END4
|
cat > $jid.runmarcscript << END4
|
||||||
if test "$user"
|
if test "$user"
|
||||||
|
|
|
@ -301,7 +301,7 @@
|
||||||
- usersub=$usersubname
|
- usersub=$usersubname
|
||||||
- fi
|
- fi
|
||||||
-
|
-
|
||||||
+ userobj=$usermoext.o
|
+ userobj=$usernoext.o
|
||||||
fi
|
fi
|
||||||
cat > $jid.runmarcscript << END4
|
cat > $jid.runmarcscript << END4
|
||||||
if test "$user"
|
if test "$user"
|
||||||
|
|
|
@ -67,7 +67,7 @@
|
||||||
+ label {
|
+ label {
|
||||||
+ position -32 +6
|
+ position -32 +6
|
||||||
+ size 12 6
|
+ size 12 6
|
||||||
+ text "O2 / OpenMP"
|
+ text "O3 / OpenMP"
|
||||||
+ border_width 1
|
+ border_width 1
|
||||||
+ border_color black
|
+ border_color black
|
||||||
+ }
|
+ }
|
||||||
|
|
|
@ -32,7 +32,7 @@
|
||||||
|
|
||||||
|
|
||||||
$LOAD ${program} $DIR/lib/main.o\
|
$LOAD ${program} $DIR/lib/main.o\
|
||||||
@@ -33,9 +42,13 @@ echo "program: $program"
|
@@ -33,9 +42,13 @@
|
||||||
$TKLIBS \
|
$TKLIBS \
|
||||||
$MRCLIBS \
|
$MRCLIBS \
|
||||||
$METISLIBS \
|
$METISLIBS \
|
||||||
|
|
|
@ -32,7 +32,7 @@
|
||||||
|
|
||||||
|
|
||||||
$LOAD ${program} $DIR/lib/main.o\
|
$LOAD ${program} $DIR/lib/main.o\
|
||||||
@@ -33,9 +42,13 @@ echo "program: $program"
|
@@ -33,9 +42,13 @@
|
||||||
$TKLIBS \
|
$TKLIBS \
|
||||||
$MRCLIBS \
|
$MRCLIBS \
|
||||||
$METISLIBS \
|
$METISLIBS \
|
||||||
|
|
|
@ -32,7 +32,7 @@
|
||||||
|
|
||||||
|
|
||||||
$LOAD ${program} $DIR/lib/main.o\
|
$LOAD ${program} $DIR/lib/main.o\
|
||||||
@@ -33,9 +42,13 @@ echo "program: $program"
|
@@ -33,9 +42,13 @@
|
||||||
$TKLIBS \
|
$TKLIBS \
|
||||||
$MRCLIBS \
|
$MRCLIBS \
|
||||||
$METISLIBS \
|
$METISLIBS \
|
||||||
|
|
|
@ -1,6 +1,6 @@
|
||||||
---
|
---
|
||||||
+++
|
+++
|
||||||
@@ -166,6 +166,11 @@ if test -n "$MSCCOSIM_HOME"; then
|
@@ -166,6 +166,15 @@
|
||||||
MARC_COSIM_LIB="$MSCCOSIM_HOME/Cosim$MSCCOSIM_VERSION/Dcosim$MSCCOSIM_VERSION/lib"
|
MARC_COSIM_LIB="$MSCCOSIM_HOME/Cosim$MSCCOSIM_VERSION/Dcosim$MSCCOSIM_VERSION/lib"
|
||||||
fi
|
fi
|
||||||
|
|
||||||
|
@ -16,17 +16,7 @@
|
||||||
# AEM
|
# AEM
|
||||||
if test "$MARCDLLOUTDIR" = ""; then
|
if test "$MARCDLLOUTDIR" = ""; then
|
||||||
DLLOUTDIR="$MARC_LIB"
|
DLLOUTDIR="$MARC_LIB"
|
||||||
@@ -477,8 +486,8 @@ if test "$MARC_INTEGER_SIZE" = "i4" ; then
|
@@ -594,7 +603,7 @@
|
||||||
I8DEFINES=
|
|
||||||
I8CDEFINES=
|
|
||||||
else
|
|
||||||
- I8FFLAGS="-i8"
|
|
||||||
+ I8FFLAGS="-i8 -integer-size 64"
|
|
||||||
I8DEFINES="-DI64"
|
|
||||||
I8CDEFINES="-U_DOUBLE -D_SINGLE"
|
|
||||||
fi
|
|
||||||
|
|
||||||
@@ -594,7 +605,7 @@ then
|
|
||||||
PROFILE=" $PROFILE -pg"
|
PROFILE=" $PROFILE -pg"
|
||||||
fi
|
fi
|
||||||
|
|
||||||
|
@ -35,7 +25,7 @@
|
||||||
if test "$MTHREAD" = "OPENMP"
|
if test "$MTHREAD" = "OPENMP"
|
||||||
then
|
then
|
||||||
FORT_OPT=" $FORT_OPT -qopenmp"
|
FORT_OPT=" $FORT_OPT -qopenmp"
|
||||||
@@ -607,7 +616,7 @@ else
|
@@ -607,7 +616,7 @@
|
||||||
FORT_OPT=" $FORT_OPT -save -zero"
|
FORT_OPT=" $FORT_OPT -save -zero"
|
||||||
fi
|
fi
|
||||||
if test "$MARCHDF_HDF" = "HDF"; then
|
if test "$MARCHDF_HDF" = "HDF"; then
|
||||||
|
@ -44,13 +34,13 @@
|
||||||
fi
|
fi
|
||||||
|
|
||||||
FORTLOW="$FCOMP $FORT_OPT $PROFILE -O0 $I8FFLAGS -I$MARC_SOURCE/common \
|
FORTLOW="$FCOMP $FORT_OPT $PROFILE -O0 $I8FFLAGS -I$MARC_SOURCE/common \
|
||||||
@@ -621,6 +630,29 @@ FORTNA="$FCOMP $FORT_OPT -fno-alias -O3 $I8FFLAGS -I$MARC_SOURCE/common \
|
@@ -621,6 +630,29 @@
|
||||||
# for compiling free form f90 files. high opt, integer(4)
|
# for compiling free form f90 files. high opt, integer(4)
|
||||||
FORTF90="$FCOMP -c -O3"
|
FORTF90="$FCOMP -c -O3"
|
||||||
|
|
||||||
+# determine DAMASK version
|
+# determine DAMASK version
|
||||||
+if test -n "$DAMASK_USER"; then
|
+if test -n "$DAMASK_USER"; then
|
||||||
+ DAMASKROOT=`dirname $DAMASK_USER`/..
|
+ DAMASKROOT=`dirname $DAMASK_USER`/../..
|
||||||
+ read DAMASKVERSION < $DAMASKROOT/VERSION
|
+ read DAMASKVERSION < $DAMASKROOT/VERSION
|
||||||
+ DAMASKVERSION="'"$DAMASKVERSION"'"
|
+ DAMASKVERSION="'"$DAMASKVERSION"'"
|
||||||
+else
|
+else
|
||||||
|
@ -74,7 +64,7 @@
|
||||||
if test "$MARCDEBUG" = "ON"
|
if test "$MARCDEBUG" = "ON"
|
||||||
then
|
then
|
||||||
FORTLOW="$FCOMP $FORT_OPT $PROFILE $I8FFLAGS -I$MARC_SOURCE/common \
|
FORTLOW="$FCOMP $FORT_OPT $PROFILE $I8FFLAGS -I$MARC_SOURCE/common \
|
||||||
@@ -778,7 +806,7 @@ SECLIBS="-L$MARC_LIB -llapi"
|
@@ -778,7 +810,7 @@
|
||||||
|
|
||||||
SOLVERLIBS="${BCSSOLVERLIBS} ${VKISOLVERLIBS} ${CASISOLVERLIBS} ${MF2SOLVERLIBS} \
|
SOLVERLIBS="${BCSSOLVERLIBS} ${VKISOLVERLIBS} ${CASISOLVERLIBS} ${MF2SOLVERLIBS} \
|
||||||
-L$MARC_MKL \
|
-L$MARC_MKL \
|
||||||
|
@ -83,21 +73,3 @@
|
||||||
|
|
||||||
SOLVERLIBS_DLL=${SOLVERLIBS}
|
SOLVERLIBS_DLL=${SOLVERLIBS}
|
||||||
if test "$AEM_DLL" -eq 1
|
if test "$AEM_DLL" -eq 1
|
||||||
@@ -802,7 +830,7 @@ then
|
|
||||||
OPENSSL=NONE
|
|
||||||
fi
|
|
||||||
|
|
||||||
-SYSLIBS=" $OPENMP -lpthread -shared-intel -cxxlib $MARC_RPC_LIB"
|
|
||||||
+SYSLIBS=" $OPENMP -lpthread -cxxlib $MARC_RPC_LIB"
|
|
||||||
|
|
||||||
# Uncomment the following lines to turn on the trace and comment out the next 4 lines
|
|
||||||
# if test $MPITYPE = intelmpi
|
|
||||||
@@ -812,7 +840,7 @@ SYSLIBS=" $OPENMP -lpthread -shared-intel -cxxlib $MARC_RPC_LIB"
|
|
||||||
# fi
|
|
||||||
if test $MPITYPE = intelmpi
|
|
||||||
then
|
|
||||||
- SYSLIBS="-L${MPI_ROOT}/lib/release -lmpi -L${MPI_ROOT}/lib -lmpifort -lrt $OPENMP -threads -lpthread -shared-intel -cxxlib $MARC_RPC_LIB"
|
|
||||||
+ SYSLIBS="-L${MPI_ROOT}/lib/release -lmpi -L${MPI_ROOT}/lib -lmpifort -lrt $OPENMP -threads -lpthread -cxxlib $MARC_RPC_LIB"
|
|
||||||
fi
|
|
||||||
|
|
||||||
if test "$ZLIB" = "ZLIB"; then
|
|
||||||
|
|
|
@ -1,6 +1,6 @@
|
||||||
---
|
---
|
||||||
+++
|
+++
|
||||||
@@ -302,7 +302,23 @@ fi
|
@@ -302,7 +302,23 @@
|
||||||
|
|
||||||
. "$DIR/getarch"
|
. "$DIR/getarch"
|
||||||
|
|
||||||
|
@ -24,7 +24,7 @@
|
||||||
#
|
#
|
||||||
|
|
||||||
#
|
#
|
||||||
@@ -405,7 +421,7 @@ sid=
|
@@ -405,7 +421,7 @@
|
||||||
did=
|
did=
|
||||||
vid=
|
vid=
|
||||||
user=
|
user=
|
||||||
|
@ -33,16 +33,7 @@
|
||||||
objs=
|
objs=
|
||||||
qid=background
|
qid=background
|
||||||
cpu=
|
cpu=
|
||||||
@@ -573,7 +589,7 @@ do
|
@@ -676,50 +692,19 @@
|
||||||
justlist=yes
|
|
||||||
;;
|
|
||||||
-fe* | -FE*)
|
|
||||||
- feature=$value
|
|
||||||
+ feature=$value
|
|
||||||
|
|
||||||
;;
|
|
||||||
-pr* | -PR*)
|
|
||||||
@@ -676,50 +692,19 @@ do
|
|
||||||
esac
|
esac
|
||||||
;;
|
;;
|
||||||
-u* | -U*)
|
-u* | -U*)
|
||||||
|
@ -99,39 +90,7 @@
|
||||||
;;
|
;;
|
||||||
-obj | -OBJ)
|
-obj | -OBJ)
|
||||||
objs="$value"
|
objs="$value"
|
||||||
@@ -739,19 +724,19 @@ do
|
@@ -1207,12 +1192,12 @@
|
||||||
;;
|
|
||||||
esac
|
|
||||||
;;
|
|
||||||
- -dl | -DL)
|
|
||||||
- case $value in
|
|
||||||
- y* | Y*)
|
|
||||||
- deletelog=yes
|
|
||||||
- ;;
|
|
||||||
- n* | N*)
|
|
||||||
- deletelog=no
|
|
||||||
- ;;
|
|
||||||
- *)
|
|
||||||
- ;;
|
|
||||||
- esac
|
|
||||||
+ -dl | -DL)
|
|
||||||
+ case $value in
|
|
||||||
+ y* | Y*)
|
|
||||||
+ deletelog=yes
|
|
||||||
+ ;;
|
|
||||||
+ n* | N*)
|
|
||||||
+ deletelog=no
|
|
||||||
+ ;;
|
|
||||||
+ *)
|
|
||||||
+ ;;
|
|
||||||
+ esac
|
|
||||||
|
|
||||||
- ;;
|
|
||||||
+ ;;
|
|
||||||
-at | -AT)
|
|
||||||
att=$value
|
|
||||||
;;
|
|
||||||
@@ -1207,12 +1192,12 @@ post file $DIRPID/$pid.t16 or $DIRPID/$pid.t19 or $DIRPID/$pid.h5 not accessible
|
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
|
@ -147,16 +106,7 @@
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
if test "$objs"
|
if test "$objs"
|
||||||
@@ -1386,7 +1371,7 @@ else
|
@@ -1531,7 +1516,7 @@
|
||||||
else
|
|
||||||
error="$error
|
|
||||||
job id required"
|
|
||||||
- fi
|
|
||||||
+fi
|
|
||||||
fi
|
|
||||||
|
|
||||||
case $qid in
|
|
||||||
@@ -1531,7 +1516,7 @@ Program name : $prog
|
|
||||||
Marc shared lib : $progdll
|
Marc shared lib : $progdll
|
||||||
Version type : $mode
|
Version type : $mode
|
||||||
Job ID : $DIRJID/$jid$extra_job_info
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
@ -165,7 +115,7 @@
|
||||||
User objects/libs : $objs
|
User objects/libs : $objs
|
||||||
Restart file job ID : $rid
|
Restart file job ID : $rid
|
||||||
Substructure file ID : $sid
|
Substructure file ID : $sid
|
||||||
@@ -1564,7 +1549,7 @@ Program name : $prog
|
@@ -1564,7 +1549,7 @@
|
||||||
Marc shared lib : $progdll
|
Marc shared lib : $progdll
|
||||||
Version type : $mode
|
Version type : $mode
|
||||||
Job ID : $DIRJID/$jid$extra_job_info
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
@ -174,7 +124,7 @@
|
||||||
User objects/libs : $objs
|
User objects/libs : $objs
|
||||||
Restart file job ID : $rid
|
Restart file job ID : $rid
|
||||||
Substructure file ID : $sid
|
Substructure file ID : $sid
|
||||||
@@ -1687,7 +1672,7 @@ Program name ($prog)? $ECHOTXT"
|
@@ -1687,7 +1672,7 @@
|
||||||
;;
|
;;
|
||||||
esac
|
esac
|
||||||
fi
|
fi
|
||||||
|
@ -183,7 +133,7 @@
|
||||||
read value
|
read value
|
||||||
if test "$value"
|
if test "$value"
|
||||||
then
|
then
|
||||||
@@ -1696,50 +1681,19 @@ Program name ($prog)? $ECHOTXT"
|
@@ -1696,50 +1681,19 @@
|
||||||
user=
|
user=
|
||||||
;;
|
;;
|
||||||
*)
|
*)
|
||||||
|
@ -209,16 +159,13 @@
|
||||||
- fi
|
- fi
|
||||||
+ user=$value
|
+ user=$value
|
||||||
case $user in
|
case $user in
|
||||||
- \/*)
|
\/*)
|
||||||
- ;;
|
;;
|
||||||
- *)
|
*)
|
||||||
+ \/*)
|
|
||||||
+ ;;
|
|
||||||
+ *)
|
|
||||||
user=`pwd`/$user
|
user=`pwd`/$user
|
||||||
- usersubname=`pwd`/$usersubname
|
- usersubname=`pwd`/$usersubname
|
||||||
- ;;
|
;;
|
||||||
- esac
|
esac
|
||||||
- if test ! -f $usersubname
|
- if test ! -f $usersubname
|
||||||
- then
|
- then
|
||||||
- if test -f $usersubname.f
|
- if test -f $usersubname.f
|
||||||
|
@ -235,8 +182,6 @@
|
||||||
- usersubname=$usersubname.F90
|
- usersubname=$usersubname.F90
|
||||||
- fi
|
- fi
|
||||||
- fi
|
- fi
|
||||||
+ ;;
|
|
||||||
+ esac
|
|
||||||
+ usernoext=$user
|
+ usernoext=$user
|
||||||
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
@ -245,7 +190,7 @@
|
||||||
;;
|
;;
|
||||||
esac
|
esac
|
||||||
fi
|
fi
|
||||||
@@ -2274,11 +2228,12 @@ fi
|
@@ -2274,11 +2228,12 @@
|
||||||
#
|
#
|
||||||
# user subroutine used
|
# user subroutine used
|
||||||
#
|
#
|
||||||
|
@ -260,7 +205,7 @@
|
||||||
case $program in
|
case $program in
|
||||||
\/* | \.\/*)
|
\/* | \.\/*)
|
||||||
bd=
|
bd=
|
||||||
@@ -2391,7 +2346,7 @@ fi
|
@@ -2391,7 +2346,7 @@
|
||||||
fi
|
fi
|
||||||
if test "$user"
|
if test "$user"
|
||||||
then
|
then
|
||||||
|
@ -269,7 +214,7 @@
|
||||||
usersub=1
|
usersub=1
|
||||||
fi
|
fi
|
||||||
export execpath
|
export execpath
|
||||||
@@ -3274,44 +3229,27 @@ then
|
@@ -3274,44 +3229,27 @@
|
||||||
echo
|
echo
|
||||||
if test "$user"
|
if test "$user"
|
||||||
then
|
then
|
||||||
|
@ -283,7 +228,7 @@
|
||||||
- usersub=$usersubname
|
- usersub=$usersubname
|
||||||
- fi
|
- fi
|
||||||
-
|
-
|
||||||
+ userobj=$usermoext.o
|
+ userobj=$usernoext.o
|
||||||
fi
|
fi
|
||||||
cat > $jid.runmarcscript << END4
|
cat > $jid.runmarcscript << END4
|
||||||
if test "$user"
|
if test "$user"
|
||||||
|
@ -319,21 +264,15 @@
|
||||||
fi
|
fi
|
||||||
|
|
||||||
|
|
||||||
@@ -3331,10 +3269,11 @@ then
|
@@ -3331,6 +3269,7 @@
|
||||||
$TKLIBS \
|
$TKLIBS \
|
||||||
$MRCLIBS \
|
$MRCLIBS \
|
||||||
$METISLIBS \
|
$METISLIBS \
|
||||||
- $SFLIB \
|
|
||||||
+ $DAMASK \
|
+ $DAMASK \
|
||||||
+ $SFLIB \
|
$SFLIB \
|
||||||
$OPENSSL_LIB \
|
$OPENSSL_LIB \
|
||||||
$SYSLIBS \
|
$SYSLIBS \
|
||||||
- $SECLIBS || \
|
@@ -3344,6 +3283,9 @@
|
||||||
+ $SECLIBS || \
|
|
||||||
{
|
|
||||||
echo "$0: link failed for ${user:+$userobj }$objs"
|
|
||||||
exit 1
|
|
||||||
@@ -3344,6 +3283,9 @@ else
|
|
||||||
prgsav=yes
|
prgsav=yes
|
||||||
fi
|
fi
|
||||||
/bin/rm $userobj 2>/dev/null
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
@ -343,7 +282,7 @@
|
||||||
|
|
||||||
#
|
#
|
||||||
# run marc
|
# run marc
|
||||||
@@ -3390,7 +3332,7 @@ if test $dllrun -eq 0; then
|
@@ -3390,7 +3332,7 @@
|
||||||
fi
|
fi
|
||||||
else
|
else
|
||||||
if test $cpdll = yes; then
|
if test $cpdll = yes; then
|
||||||
|
@ -352,7 +291,7 @@
|
||||||
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
fi
|
fi
|
||||||
if test $rmdll = yes
|
if test $rmdll = yes
|
||||||
@@ -3556,7 +3498,7 @@ then
|
@@ -3556,7 +3498,7 @@
|
||||||
# first copy over the user sub if local directories
|
# first copy over the user sub if local directories
|
||||||
if test ${dirstatus[$counter]} = "local"
|
if test ${dirstatus[$counter]} = "local"
|
||||||
then
|
then
|
||||||
|
@ -361,7 +300,7 @@
|
||||||
fi
|
fi
|
||||||
# do the compilation on the other machine
|
# do the compilation on the other machine
|
||||||
if test ${dirstatus[$counter]} = "shared"
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
@@ -3569,21 +3511,21 @@ then
|
@@ -3569,21 +3511,21 @@
|
||||||
remoteuser=$DIR1/`$BASENAME $user`
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
echo
|
echo
|
||||||
|
@ -386,7 +325,7 @@
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
@@ -3593,39 +3535,27 @@ then
|
@@ -3593,39 +3535,27 @@
|
||||||
if test "$userhost"
|
if test "$userhost"
|
||||||
then
|
then
|
||||||
echo
|
echo
|
||||||
|
@ -432,21 +371,15 @@
|
||||||
fi # if test $user
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
@@ -3645,10 +3575,11 @@ then
|
@@ -3645,6 +3575,7 @@
|
||||||
$TKLIBS \
|
$TKLIBS \
|
||||||
$MRCLIBS \
|
$MRCLIBS \
|
||||||
$METISLIBS \
|
$METISLIBS \
|
||||||
- $SFLIB \
|
|
||||||
+ $DAMASK \
|
+ $DAMASK \
|
||||||
+ $SFLIB \
|
$SFLIB \
|
||||||
$OPENSSL_LIB \
|
$OPENSSL_LIB \
|
||||||
$SYSLIBS \
|
$SYSLIBS \
|
||||||
- $SECLIBS || \
|
@@ -3686,6 +3617,9 @@
|
||||||
+ $SECLIBS || \
|
|
||||||
{
|
|
||||||
echo "$0: link failed for ${user:+$userobj }$objs"
|
|
||||||
echo " $PRODUCT Exit number 3"
|
|
||||||
@@ -3686,6 +3617,9 @@ else # if test $link
|
|
||||||
prgsav=yes
|
prgsav=yes
|
||||||
fi # if test $link
|
fi # if test $link
|
||||||
/bin/rm $userobj 2>/dev/null
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
@ -456,69 +389,7 @@
|
||||||
|
|
||||||
#
|
#
|
||||||
# run marc
|
# run marc
|
||||||
@@ -3744,42 +3678,42 @@ then
|
@@ -3779,7 +3713,7 @@
|
||||||
counter=0
|
|
||||||
if test -f "$host_filt"
|
|
||||||
then
|
|
||||||
- for i in `$AWK -v n=$numfield '{print $n}' $host_filt`
|
|
||||||
- do
|
|
||||||
- ibase=${i%%.*}
|
|
||||||
- if test $ibase != $thishost
|
|
||||||
+ for i in `$AWK -v n=$numfield '{print $n}' $host_filt`
|
|
||||||
+ do
|
|
||||||
+ ibase=${i%%.*}
|
|
||||||
+ if test $ibase != $thishost
|
|
||||||
+ then
|
|
||||||
+ counter=$((counter+1))
|
|
||||||
+ DIR1=$DIRJOB
|
|
||||||
+ line=`grep -v '^#' $userhost | grep "^$ibase "`
|
|
||||||
+ workdir=`echo $line | $AWK '{print $3}'`
|
|
||||||
+ if test -n "$workdir"
|
|
||||||
then
|
|
||||||
- counter=$((counter+1))
|
|
||||||
- DIR1=$DIRJOB
|
|
||||||
- line=`grep -v '^#' $userhost | grep "^$ibase "`
|
|
||||||
- workdir=`echo $line | $AWK '{print $3}'`
|
|
||||||
- if test -n "$workdir"
|
|
||||||
- then
|
|
||||||
- DIR1=$workdir
|
|
||||||
- fi
|
|
||||||
- # if an incompatible host uses shared directory,
|
|
||||||
- # then the root machine deletes the executable
|
|
||||||
- if test ${dirstatus[$counter]} = "shared" -a ${compstatus[$counter]} = "no"
|
|
||||||
- then
|
|
||||||
- hname=_$ibase
|
|
||||||
- /bin/rm ${execname}$hname
|
|
||||||
- fi
|
|
||||||
- # if local directory used, the remote machine
|
|
||||||
- # deletes the executable
|
|
||||||
- if test ${dirstatus[$counter]} = "local"
|
|
||||||
- then
|
|
||||||
- $RSH $i /bin/rm $DIR1/${execname} 2>/dev/null
|
|
||||||
- fi
|
|
||||||
+ DIR1=$workdir
|
|
||||||
fi
|
|
||||||
- done
|
|
||||||
- fi
|
|
||||||
+ # if an incompatible host uses shared directory,
|
|
||||||
+ # then the root machine deletes the executable
|
|
||||||
+ if test ${dirstatus[$counter]} = "shared" -a ${compstatus[$counter]} = "no"
|
|
||||||
+ then
|
|
||||||
+ hname=_$ibase
|
|
||||||
+ /bin/rm ${execname}$hname
|
|
||||||
+ fi
|
|
||||||
+ # if local directory used, the remote machine
|
|
||||||
+ # deletes the executable
|
|
||||||
+ if test ${dirstatus[$counter]} = "local"
|
|
||||||
+ then
|
|
||||||
+ $RSH $i /bin/rm $DIR1/${execname} 2>/dev/null
|
|
||||||
+ fi
|
|
||||||
+ fi
|
|
||||||
+ done
|
|
||||||
fi
|
|
||||||
fi
|
|
||||||
fi
|
|
||||||
+fi
|
|
||||||
else
|
else
|
||||||
#dllrun >0
|
#dllrun >0
|
||||||
if test $cpdll = yes; then
|
if test $cpdll = yes; then
|
||||||
|
@ -527,7 +398,7 @@
|
||||||
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
fi
|
fi
|
||||||
if test $rmdll = yes;then
|
if test $rmdll = yes;then
|
||||||
@@ -3904,7 +3838,7 @@ then
|
@@ -3904,7 +3838,7 @@
|
||||||
# first copy over the user sub if local directories
|
# first copy over the user sub if local directories
|
||||||
if test ${dirstatus[$counter]} = "local"
|
if test ${dirstatus[$counter]} = "local"
|
||||||
then
|
then
|
||||||
|
@ -536,7 +407,7 @@
|
||||||
fi
|
fi
|
||||||
# do the compilation on the other machine
|
# do the compilation on the other machine
|
||||||
if test ${dirstatus[$counter]} = "shared"
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
@@ -3917,20 +3851,20 @@ then
|
@@ -3917,20 +3851,20 @@
|
||||||
remoteuser=$DIR1/`$BASENAME $user`
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
echo
|
echo
|
||||||
|
@ -560,7 +431,7 @@
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
@@ -3940,37 +3874,25 @@ then
|
@@ -3940,37 +3874,25 @@
|
||||||
if test "$userhost"
|
if test "$userhost"
|
||||||
then
|
then
|
||||||
echo
|
echo
|
||||||
|
@ -604,7 +475,7 @@
|
||||||
fi # if test $user
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
@@ -3990,10 +3912,11 @@ then
|
@@ -3990,6 +3912,7 @@
|
||||||
$TKLIBS \
|
$TKLIBS \
|
||||||
$MRCLIBS \
|
$MRCLIBS \
|
||||||
$METISLIBS \
|
$METISLIBS \
|
||||||
|
@ -612,12 +483,7 @@
|
||||||
$SFLIB \
|
$SFLIB \
|
||||||
$OPENSSL_LIB \
|
$OPENSSL_LIB \
|
||||||
$SYSLIBS \
|
$SYSLIBS \
|
||||||
- $SECLIBS || \
|
@@ -4030,7 +3953,9 @@
|
||||||
+ $SECLIBS || \
|
|
||||||
{
|
|
||||||
echo "$0: link failed for ${user:+$userobj }$objs"
|
|
||||||
exit 1
|
|
||||||
@@ -4030,7 +3953,9 @@ else # if test $link
|
|
||||||
prgsav=yes
|
prgsav=yes
|
||||||
fi # if test $link
|
fi # if test $link
|
||||||
/bin/rm $userobj 2>/dev/null
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
@ -628,78 +494,7 @@
|
||||||
# done if no job id given
|
# done if no job id given
|
||||||
if test -z "$jid"
|
if test -z "$jid"
|
||||||
then
|
then
|
||||||
@@ -4070,7 +3995,7 @@ if test $ddm_arc -gt 0; then
|
@@ -4149,7 +4074,7 @@
|
||||||
RUN_JOB="$BINDIR/exeddm $RUN_JOB -ddm $ddm_arc "
|
|
||||||
fi
|
|
||||||
|
|
||||||
-$RUN_JOB
|
|
||||||
+ $RUN_JOB
|
|
||||||
|
|
||||||
if test $nprocd -gt 1
|
|
||||||
then
|
|
||||||
@@ -4114,42 +4039,42 @@ then
|
|
||||||
counter=0
|
|
||||||
if test -f "$host_filt"
|
|
||||||
then
|
|
||||||
- for i in `$AWK -v n=$numfield '{print $n}' $host_filt`
|
|
||||||
- do
|
|
||||||
- ibase=${i%%.*}
|
|
||||||
- if test $ibase != $thishost
|
|
||||||
+ for i in `$AWK -v n=$numfield '{print $n}' $host_filt`
|
|
||||||
+ do
|
|
||||||
+ ibase=${i%%.*}
|
|
||||||
+ if test $ibase != $thishost
|
|
||||||
+ then
|
|
||||||
+ counter=$((counter+1))
|
|
||||||
+ DIR1=$DIRJOB
|
|
||||||
+ line=`grep -v '^#' $userhost | grep "^$ibase "`
|
|
||||||
+ workdir=`echo $line | $AWK '{print $3}'`
|
|
||||||
+ if test -n "$workdir"
|
|
||||||
then
|
|
||||||
- counter=$((counter+1))
|
|
||||||
- DIR1=$DIRJOB
|
|
||||||
- line=`grep -v '^#' $userhost | grep "^$ibase "`
|
|
||||||
- workdir=`echo $line | $AWK '{print $3}'`
|
|
||||||
- if test -n "$workdir"
|
|
||||||
- then
|
|
||||||
- DIR1=$workdir
|
|
||||||
- fi
|
|
||||||
- # if an incompatible host uses shared directory,
|
|
||||||
- # then the root machine deletes the executable
|
|
||||||
- if test ${dirstatus[$counter]} = "shared" -a ${compstatus[$counter]} = "no"
|
|
||||||
- then
|
|
||||||
- hname=_$ibase
|
|
||||||
- /bin/rm ${execname}$hname
|
|
||||||
- fi
|
|
||||||
- # if local directory used, the remote machine
|
|
||||||
- # deletes the executable
|
|
||||||
- if test ${dirstatus[$counter]} = "local"
|
|
||||||
- then
|
|
||||||
- $RSH $i /bin/rm $DIR1/${execname} 2>/dev/null
|
|
||||||
- fi
|
|
||||||
+ DIR1=$workdir
|
|
||||||
fi
|
|
||||||
- done
|
|
||||||
- fi
|
|
||||||
+ # if an incompatible host uses shared directory,
|
|
||||||
+ # then the root machine deletes the executable
|
|
||||||
+ if test ${dirstatus[$counter]} = "shared" -a ${compstatus[$counter]} = "no"
|
|
||||||
+ then
|
|
||||||
+ hname=_$ibase
|
|
||||||
+ /bin/rm ${execname}$hname
|
|
||||||
+ fi
|
|
||||||
+ # if local directory used, the remote machine
|
|
||||||
+ # deletes the executable
|
|
||||||
+ if test ${dirstatus[$counter]} = "local"
|
|
||||||
+ then
|
|
||||||
+ $RSH $i /bin/rm $DIR1/${execname} 2>/dev/null
|
|
||||||
+ fi
|
|
||||||
+ fi
|
|
||||||
+ done
|
|
||||||
fi
|
|
||||||
fi
|
|
||||||
fi
|
|
||||||
+fi
|
|
||||||
else
|
else
|
||||||
#dllrun >0
|
#dllrun >0
|
||||||
if test $cpdll = yes; then
|
if test $cpdll = yes; then
|
||||||
|
|
|
@ -1,6 +1,6 @@
|
||||||
---
|
---
|
||||||
+++
|
+++
|
||||||
@@ -302,7 +302,23 @@ fi
|
@@ -302,7 +302,23 @@
|
||||||
|
|
||||||
. "$DIR/getarch"
|
. "$DIR/getarch"
|
||||||
|
|
||||||
|
@ -24,7 +24,7 @@
|
||||||
#
|
#
|
||||||
|
|
||||||
#
|
#
|
||||||
@@ -405,7 +421,7 @@ sid=
|
@@ -405,7 +421,7 @@
|
||||||
did=
|
did=
|
||||||
vid=
|
vid=
|
||||||
user=
|
user=
|
||||||
|
@ -33,16 +33,7 @@
|
||||||
objs=
|
objs=
|
||||||
qid=background
|
qid=background
|
||||||
cpu=
|
cpu=
|
||||||
@@ -573,7 +589,7 @@ do
|
@@ -676,50 +692,19 @@
|
||||||
justlist=yes
|
|
||||||
;;
|
|
||||||
-fe* | -FE*)
|
|
||||||
- feature=$value
|
|
||||||
+ feature=$value
|
|
||||||
|
|
||||||
;;
|
|
||||||
-pr* | -PR*)
|
|
||||||
@@ -676,50 +692,19 @@ do
|
|
||||||
esac
|
esac
|
||||||
;;
|
;;
|
||||||
-u* | -U*)
|
-u* | -U*)
|
||||||
|
@ -99,39 +90,7 @@
|
||||||
;;
|
;;
|
||||||
-obj | -OBJ)
|
-obj | -OBJ)
|
||||||
objs="$value"
|
objs="$value"
|
||||||
@@ -739,19 +724,19 @@ do
|
@@ -1207,12 +1192,12 @@
|
||||||
;;
|
|
||||||
esac
|
|
||||||
;;
|
|
||||||
- -dl | -DL)
|
|
||||||
- case $value in
|
|
||||||
- y* | Y*)
|
|
||||||
- deletelog=yes
|
|
||||||
- ;;
|
|
||||||
- n* | N*)
|
|
||||||
- deletelog=no
|
|
||||||
- ;;
|
|
||||||
- *)
|
|
||||||
- ;;
|
|
||||||
- esac
|
|
||||||
+ -dl | -DL)
|
|
||||||
+ case $value in
|
|
||||||
+ y* | Y*)
|
|
||||||
+ deletelog=yes
|
|
||||||
+ ;;
|
|
||||||
+ n* | N*)
|
|
||||||
+ deletelog=no
|
|
||||||
+ ;;
|
|
||||||
+ *)
|
|
||||||
+ ;;
|
|
||||||
+ esac
|
|
||||||
|
|
||||||
- ;;
|
|
||||||
+ ;;
|
|
||||||
-at | -AT)
|
|
||||||
att=$value
|
|
||||||
;;
|
|
||||||
@@ -1207,12 +1192,12 @@ post file $DIRPID/$pid.t16 or $DIRPID/$pid.t19 or $DIRPID/$pid.h5 not accessible
|
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
|
@ -147,16 +106,7 @@
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
if test "$objs"
|
if test "$objs"
|
||||||
@@ -1386,7 +1371,7 @@ else
|
@@ -1531,7 +1516,7 @@
|
||||||
else
|
|
||||||
error="$error
|
|
||||||
job id required"
|
|
||||||
- fi
|
|
||||||
+fi
|
|
||||||
fi
|
|
||||||
|
|
||||||
case $qid in
|
|
||||||
@@ -1531,7 +1516,7 @@ Program name : $prog
|
|
||||||
Marc shared lib : $progdll
|
Marc shared lib : $progdll
|
||||||
Version type : $mode
|
Version type : $mode
|
||||||
Job ID : $DIRJID/$jid$extra_job_info
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
@ -165,7 +115,7 @@
|
||||||
User objects/libs : $objs
|
User objects/libs : $objs
|
||||||
Restart file job ID : $rid
|
Restart file job ID : $rid
|
||||||
Substructure file ID : $sid
|
Substructure file ID : $sid
|
||||||
@@ -1564,7 +1549,7 @@ Program name : $prog
|
@@ -1564,7 +1549,7 @@
|
||||||
Marc shared lib : $progdll
|
Marc shared lib : $progdll
|
||||||
Version type : $mode
|
Version type : $mode
|
||||||
Job ID : $DIRJID/$jid$extra_job_info
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
@ -174,7 +124,7 @@
|
||||||
User objects/libs : $objs
|
User objects/libs : $objs
|
||||||
Restart file job ID : $rid
|
Restart file job ID : $rid
|
||||||
Substructure file ID : $sid
|
Substructure file ID : $sid
|
||||||
@@ -1687,7 +1672,7 @@ Program name ($prog)? $ECHOTXT"
|
@@ -1687,7 +1672,7 @@
|
||||||
;;
|
;;
|
||||||
esac
|
esac
|
||||||
fi
|
fi
|
||||||
|
@ -183,7 +133,7 @@
|
||||||
read value
|
read value
|
||||||
if test "$value"
|
if test "$value"
|
||||||
then
|
then
|
||||||
@@ -1696,50 +1681,19 @@ Program name ($prog)? $ECHOTXT"
|
@@ -1696,50 +1681,19 @@
|
||||||
user=
|
user=
|
||||||
;;
|
;;
|
||||||
*)
|
*)
|
||||||
|
@ -209,16 +159,13 @@
|
||||||
- fi
|
- fi
|
||||||
+ user=$value
|
+ user=$value
|
||||||
case $user in
|
case $user in
|
||||||
- \/*)
|
\/*)
|
||||||
- ;;
|
;;
|
||||||
- *)
|
*)
|
||||||
+ \/*)
|
|
||||||
+ ;;
|
|
||||||
+ *)
|
|
||||||
user=`pwd`/$user
|
user=`pwd`/$user
|
||||||
- usersubname=`pwd`/$usersubname
|
- usersubname=`pwd`/$usersubname
|
||||||
- ;;
|
;;
|
||||||
- esac
|
esac
|
||||||
- if test ! -f $usersubname
|
- if test ! -f $usersubname
|
||||||
- then
|
- then
|
||||||
- if test -f $usersubname.f
|
- if test -f $usersubname.f
|
||||||
|
@ -235,8 +182,6 @@
|
||||||
- usersubname=$usersubname.F90
|
- usersubname=$usersubname.F90
|
||||||
- fi
|
- fi
|
||||||
- fi
|
- fi
|
||||||
+ ;;
|
|
||||||
+ esac
|
|
||||||
+ usernoext=$user
|
+ usernoext=$user
|
||||||
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
@ -245,7 +190,7 @@
|
||||||
;;
|
;;
|
||||||
esac
|
esac
|
||||||
fi
|
fi
|
||||||
@@ -2274,11 +2228,12 @@ fi
|
@@ -2274,11 +2228,12 @@
|
||||||
#
|
#
|
||||||
# user subroutine used
|
# user subroutine used
|
||||||
#
|
#
|
||||||
|
@ -260,7 +205,7 @@
|
||||||
case $program in
|
case $program in
|
||||||
\/* | \.\/*)
|
\/* | \.\/*)
|
||||||
bd=
|
bd=
|
||||||
@@ -2391,7 +2346,7 @@ fi
|
@@ -2391,7 +2346,7 @@
|
||||||
fi
|
fi
|
||||||
if test "$user"
|
if test "$user"
|
||||||
then
|
then
|
||||||
|
@ -269,7 +214,7 @@
|
||||||
usersub=1
|
usersub=1
|
||||||
fi
|
fi
|
||||||
export execpath
|
export execpath
|
||||||
@@ -3274,44 +3229,27 @@ then
|
@@ -3274,44 +3229,27 @@
|
||||||
echo
|
echo
|
||||||
if test "$user"
|
if test "$user"
|
||||||
then
|
then
|
||||||
|
@ -283,7 +228,7 @@
|
||||||
- usersub=$usersubname
|
- usersub=$usersubname
|
||||||
- fi
|
- fi
|
||||||
-
|
-
|
||||||
+ userobj=$usermoext.o
|
+ userobj=$usernoext.o
|
||||||
fi
|
fi
|
||||||
cat > $jid.runmarcscript << END4
|
cat > $jid.runmarcscript << END4
|
||||||
if test "$user"
|
if test "$user"
|
||||||
|
@ -319,21 +264,15 @@
|
||||||
fi
|
fi
|
||||||
|
|
||||||
|
|
||||||
@@ -3331,10 +3269,11 @@ then
|
@@ -3331,6 +3269,7 @@
|
||||||
$TKLIBS \
|
$TKLIBS \
|
||||||
$MRCLIBS \
|
$MRCLIBS \
|
||||||
$METISLIBS \
|
$METISLIBS \
|
||||||
- $SFLIB \
|
|
||||||
+ $DAMASK \
|
+ $DAMASK \
|
||||||
+ $SFLIB \
|
$SFLIB \
|
||||||
$OPENSSL_LIB \
|
$OPENSSL_LIB \
|
||||||
$SYSLIBS \
|
$SYSLIBS \
|
||||||
- $SECLIBS || \
|
@@ -3344,6 +3283,9 @@
|
||||||
+ $SECLIBS || \
|
|
||||||
{
|
|
||||||
echo "$0: link failed for ${user:+$userobj }$objs"
|
|
||||||
exit 1
|
|
||||||
@@ -3344,6 +3283,9 @@ else
|
|
||||||
prgsav=yes
|
prgsav=yes
|
||||||
fi
|
fi
|
||||||
/bin/rm $userobj 2>/dev/null
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
@ -343,7 +282,7 @@
|
||||||
|
|
||||||
#
|
#
|
||||||
# run marc
|
# run marc
|
||||||
@@ -3390,7 +3332,7 @@ if test $dllrun -eq 0; then
|
@@ -3390,7 +3332,7 @@
|
||||||
fi
|
fi
|
||||||
else
|
else
|
||||||
if test $cpdll = yes; then
|
if test $cpdll = yes; then
|
||||||
|
@ -352,7 +291,7 @@
|
||||||
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
fi
|
fi
|
||||||
if test $rmdll = yes
|
if test $rmdll = yes
|
||||||
@@ -3556,7 +3498,7 @@ then
|
@@ -3556,7 +3498,7 @@
|
||||||
# first copy over the user sub if local directories
|
# first copy over the user sub if local directories
|
||||||
if test ${dirstatus[$counter]} = "local"
|
if test ${dirstatus[$counter]} = "local"
|
||||||
then
|
then
|
||||||
|
@ -361,7 +300,7 @@
|
||||||
fi
|
fi
|
||||||
# do the compilation on the other machine
|
# do the compilation on the other machine
|
||||||
if test ${dirstatus[$counter]} = "shared"
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
@@ -3569,21 +3511,21 @@ then
|
@@ -3569,21 +3511,21 @@
|
||||||
remoteuser=$DIR1/`$BASENAME $user`
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
echo
|
echo
|
||||||
|
@ -386,7 +325,7 @@
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
@@ -3593,39 +3535,27 @@ then
|
@@ -3593,39 +3535,27 @@
|
||||||
if test "$userhost"
|
if test "$userhost"
|
||||||
then
|
then
|
||||||
echo
|
echo
|
||||||
|
@ -432,21 +371,15 @@
|
||||||
fi # if test $user
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
@@ -3645,10 +3575,11 @@ then
|
@@ -3645,6 +3575,7 @@
|
||||||
$TKLIBS \
|
$TKLIBS \
|
||||||
$MRCLIBS \
|
$MRCLIBS \
|
||||||
$METISLIBS \
|
$METISLIBS \
|
||||||
- $SFLIB \
|
|
||||||
+ $DAMASK \
|
+ $DAMASK \
|
||||||
+ $SFLIB \
|
$SFLIB \
|
||||||
$OPENSSL_LIB \
|
$OPENSSL_LIB \
|
||||||
$SYSLIBS \
|
$SYSLIBS \
|
||||||
- $SECLIBS || \
|
@@ -3686,6 +3617,9 @@
|
||||||
+ $SECLIBS || \
|
|
||||||
{
|
|
||||||
echo "$0: link failed for ${user:+$userobj }$objs"
|
|
||||||
echo " $PRODUCT Exit number 3"
|
|
||||||
@@ -3686,6 +3617,9 @@ else # if test $link
|
|
||||||
prgsav=yes
|
prgsav=yes
|
||||||
fi # if test $link
|
fi # if test $link
|
||||||
/bin/rm $userobj 2>/dev/null
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
@ -456,69 +389,7 @@
|
||||||
|
|
||||||
#
|
#
|
||||||
# run marc
|
# run marc
|
||||||
@@ -3744,42 +3678,42 @@ then
|
@@ -3779,7 +3713,7 @@
|
||||||
counter=0
|
|
||||||
if test -f "$host_filt"
|
|
||||||
then
|
|
||||||
- for i in `$AWK -v n=$numfield '{print $n}' $host_filt`
|
|
||||||
- do
|
|
||||||
- ibase=${i%%.*}
|
|
||||||
- if test $ibase != $thishost
|
|
||||||
+ for i in `$AWK -v n=$numfield '{print $n}' $host_filt`
|
|
||||||
+ do
|
|
||||||
+ ibase=${i%%.*}
|
|
||||||
+ if test $ibase != $thishost
|
|
||||||
+ then
|
|
||||||
+ counter=$((counter+1))
|
|
||||||
+ DIR1=$DIRJOB
|
|
||||||
+ line=`grep -v '^#' $userhost | grep "^$ibase "`
|
|
||||||
+ workdir=`echo $line | $AWK '{print $3}'`
|
|
||||||
+ if test -n "$workdir"
|
|
||||||
then
|
|
||||||
- counter=$((counter+1))
|
|
||||||
- DIR1=$DIRJOB
|
|
||||||
- line=`grep -v '^#' $userhost | grep "^$ibase "`
|
|
||||||
- workdir=`echo $line | $AWK '{print $3}'`
|
|
||||||
- if test -n "$workdir"
|
|
||||||
- then
|
|
||||||
- DIR1=$workdir
|
|
||||||
- fi
|
|
||||||
- # if an incompatible host uses shared directory,
|
|
||||||
- # then the root machine deletes the executable
|
|
||||||
- if test ${dirstatus[$counter]} = "shared" -a ${compstatus[$counter]} = "no"
|
|
||||||
- then
|
|
||||||
- hname=_$ibase
|
|
||||||
- /bin/rm ${execname}$hname
|
|
||||||
- fi
|
|
||||||
- # if local directory used, the remote machine
|
|
||||||
- # deletes the executable
|
|
||||||
- if test ${dirstatus[$counter]} = "local"
|
|
||||||
- then
|
|
||||||
- $RSH $i /bin/rm $DIR1/${execname} 2>/dev/null
|
|
||||||
- fi
|
|
||||||
+ DIR1=$workdir
|
|
||||||
fi
|
|
||||||
- done
|
|
||||||
- fi
|
|
||||||
+ # if an incompatible host uses shared directory,
|
|
||||||
+ # then the root machine deletes the executable
|
|
||||||
+ if test ${dirstatus[$counter]} = "shared" -a ${compstatus[$counter]} = "no"
|
|
||||||
+ then
|
|
||||||
+ hname=_$ibase
|
|
||||||
+ /bin/rm ${execname}$hname
|
|
||||||
+ fi
|
|
||||||
+ # if local directory used, the remote machine
|
|
||||||
+ # deletes the executable
|
|
||||||
+ if test ${dirstatus[$counter]} = "local"
|
|
||||||
+ then
|
|
||||||
+ $RSH $i /bin/rm $DIR1/${execname} 2>/dev/null
|
|
||||||
+ fi
|
|
||||||
+ fi
|
|
||||||
+ done
|
|
||||||
fi
|
|
||||||
fi
|
|
||||||
fi
|
|
||||||
+fi
|
|
||||||
else
|
else
|
||||||
#dllrun >0
|
#dllrun >0
|
||||||
if test $cpdll = yes; then
|
if test $cpdll = yes; then
|
||||||
|
@ -527,7 +398,7 @@
|
||||||
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
fi
|
fi
|
||||||
if test $rmdll = yes;then
|
if test $rmdll = yes;then
|
||||||
@@ -3904,7 +3838,7 @@ then
|
@@ -3904,7 +3838,7 @@
|
||||||
# first copy over the user sub if local directories
|
# first copy over the user sub if local directories
|
||||||
if test ${dirstatus[$counter]} = "local"
|
if test ${dirstatus[$counter]} = "local"
|
||||||
then
|
then
|
||||||
|
@ -536,7 +407,7 @@
|
||||||
fi
|
fi
|
||||||
# do the compilation on the other machine
|
# do the compilation on the other machine
|
||||||
if test ${dirstatus[$counter]} = "shared"
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
@@ -3917,20 +3851,20 @@ then
|
@@ -3917,20 +3851,20 @@
|
||||||
remoteuser=$DIR1/`$BASENAME $user`
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
echo
|
echo
|
||||||
|
@ -560,7 +431,7 @@
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
@@ -3940,37 +3874,25 @@ then
|
@@ -3940,37 +3874,25 @@
|
||||||
if test "$userhost"
|
if test "$userhost"
|
||||||
then
|
then
|
||||||
echo
|
echo
|
||||||
|
@ -604,7 +475,7 @@
|
||||||
fi # if test $user
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
@@ -3990,10 +3912,11 @@ then
|
@@ -3990,6 +3912,7 @@
|
||||||
$TKLIBS \
|
$TKLIBS \
|
||||||
$MRCLIBS \
|
$MRCLIBS \
|
||||||
$METISLIBS \
|
$METISLIBS \
|
||||||
|
@ -612,12 +483,7 @@
|
||||||
$SFLIB \
|
$SFLIB \
|
||||||
$OPENSSL_LIB \
|
$OPENSSL_LIB \
|
||||||
$SYSLIBS \
|
$SYSLIBS \
|
||||||
- $SECLIBS || \
|
@@ -4030,7 +3953,9 @@
|
||||||
+ $SECLIBS || \
|
|
||||||
{
|
|
||||||
echo "$0: link failed for ${user:+$userobj }$objs"
|
|
||||||
exit 1
|
|
||||||
@@ -4030,7 +3953,9 @@ else # if test $link
|
|
||||||
prgsav=yes
|
prgsav=yes
|
||||||
fi # if test $link
|
fi # if test $link
|
||||||
/bin/rm $userobj 2>/dev/null
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
@ -628,78 +494,7 @@
|
||||||
# done if no job id given
|
# done if no job id given
|
||||||
if test -z "$jid"
|
if test -z "$jid"
|
||||||
then
|
then
|
||||||
@@ -4070,7 +3995,7 @@ if test $ddm_arc -gt 0; then
|
@@ -4149,7 +4074,7 @@
|
||||||
RUN_JOB="$BINDIR/exeddm $RUN_JOB -ddm $ddm_arc "
|
|
||||||
fi
|
|
||||||
|
|
||||||
-$RUN_JOB
|
|
||||||
+ $RUN_JOB
|
|
||||||
|
|
||||||
if test $nprocd -gt 1
|
|
||||||
then
|
|
||||||
@@ -4114,42 +4039,42 @@ then
|
|
||||||
counter=0
|
|
||||||
if test -f "$host_filt"
|
|
||||||
then
|
|
||||||
- for i in `$AWK -v n=$numfield '{print $n}' $host_filt`
|
|
||||||
- do
|
|
||||||
- ibase=${i%%.*}
|
|
||||||
- if test $ibase != $thishost
|
|
||||||
+ for i in `$AWK -v n=$numfield '{print $n}' $host_filt`
|
|
||||||
+ do
|
|
||||||
+ ibase=${i%%.*}
|
|
||||||
+ if test $ibase != $thishost
|
|
||||||
+ then
|
|
||||||
+ counter=$((counter+1))
|
|
||||||
+ DIR1=$DIRJOB
|
|
||||||
+ line=`grep -v '^#' $userhost | grep "^$ibase "`
|
|
||||||
+ workdir=`echo $line | $AWK '{print $3}'`
|
|
||||||
+ if test -n "$workdir"
|
|
||||||
then
|
|
||||||
- counter=$((counter+1))
|
|
||||||
- DIR1=$DIRJOB
|
|
||||||
- line=`grep -v '^#' $userhost | grep "^$ibase "`
|
|
||||||
- workdir=`echo $line | $AWK '{print $3}'`
|
|
||||||
- if test -n "$workdir"
|
|
||||||
- then
|
|
||||||
- DIR1=$workdir
|
|
||||||
- fi
|
|
||||||
- # if an incompatible host uses shared directory,
|
|
||||||
- # then the root machine deletes the executable
|
|
||||||
- if test ${dirstatus[$counter]} = "shared" -a ${compstatus[$counter]} = "no"
|
|
||||||
- then
|
|
||||||
- hname=_$ibase
|
|
||||||
- /bin/rm ${execname}$hname
|
|
||||||
- fi
|
|
||||||
- # if local directory used, the remote machine
|
|
||||||
- # deletes the executable
|
|
||||||
- if test ${dirstatus[$counter]} = "local"
|
|
||||||
- then
|
|
||||||
- $RSH $i /bin/rm $DIR1/${execname} 2>/dev/null
|
|
||||||
- fi
|
|
||||||
+ DIR1=$workdir
|
|
||||||
fi
|
|
||||||
- done
|
|
||||||
- fi
|
|
||||||
+ # if an incompatible host uses shared directory,
|
|
||||||
+ # then the root machine deletes the executable
|
|
||||||
+ if test ${dirstatus[$counter]} = "shared" -a ${compstatus[$counter]} = "no"
|
|
||||||
+ then
|
|
||||||
+ hname=_$ibase
|
|
||||||
+ /bin/rm ${execname}$hname
|
|
||||||
+ fi
|
|
||||||
+ # if local directory used, the remote machine
|
|
||||||
+ # deletes the executable
|
|
||||||
+ if test ${dirstatus[$counter]} = "local"
|
|
||||||
+ then
|
|
||||||
+ $RSH $i /bin/rm $DIR1/${execname} 2>/dev/null
|
|
||||||
+ fi
|
|
||||||
+ fi
|
|
||||||
+ done
|
|
||||||
fi
|
|
||||||
fi
|
|
||||||
fi
|
|
||||||
+fi
|
|
||||||
else
|
else
|
||||||
#dllrun >0
|
#dllrun >0
|
||||||
if test $cpdll = yes; then
|
if test $cpdll = yes; then
|
||||||
|
|
|
@ -1,8 +1,6 @@
|
||||||
diff --git "a/C:\\Users\\f.roters\\Documents\\Forschung\\FEM\\Kristallplastizit\303\244t\\Programme\\Userroutinen\\Marc\\Marc_mods\\2022.1\\Marc_tools\\run_marc.original" "b/C:\\Users\\f.roters\\Documents\\Forschung\\FEM\\Kristallplastizit\303\244t\\Programme\\Userroutinen\\Marc\\Marc_mods\\2022.1\\Marc_tools\\run_damask_mp"
|
---
|
||||||
index 88a3027..85beabe 100644
|
+++
|
||||||
--- "a/C:\\Users\\f.roters\\Documents\\Forschung\\FEM\\Kristallplastizit\303\244t\\Programme\\Userroutinen\\Marc\\Marc_mods\\2022.1\\Marc_tools\\run_marc.original"
|
@@ -302,7 +302,23 @@
|
||||||
+++ "b/C:\\Users\\f.roters\\Documents\\Forschung\\FEM\\Kristallplastizit\303\244t\\Programme\\Userroutinen\\Marc\\Marc_mods\\2022.1\\Marc_tools\\run_damask_mp"
|
|
||||||
@@ -302,7 +302,23 @@ fi
|
|
||||||
|
|
||||||
. "$DIR/getarch"
|
. "$DIR/getarch"
|
||||||
|
|
||||||
|
@ -26,7 +24,7 @@ index 88a3027..85beabe 100644
|
||||||
#
|
#
|
||||||
|
|
||||||
#
|
#
|
||||||
@@ -405,7 +421,7 @@ sid=
|
@@ -405,7 +421,7 @@
|
||||||
did=
|
did=
|
||||||
vid=
|
vid=
|
||||||
user=
|
user=
|
||||||
|
@ -35,16 +33,7 @@ index 88a3027..85beabe 100644
|
||||||
objs=
|
objs=
|
||||||
qid=background
|
qid=background
|
||||||
cpu=
|
cpu=
|
||||||
@@ -573,7 +589,7 @@ do
|
@@ -676,50 +692,19 @@
|
||||||
justlist=yes
|
|
||||||
;;
|
|
||||||
-fe* | -FE*)
|
|
||||||
- feature=$value
|
|
||||||
+ feature=$value
|
|
||||||
|
|
||||||
;;
|
|
||||||
-pr* | -PR*)
|
|
||||||
@@ -676,50 +692,19 @@ do
|
|
||||||
esac
|
esac
|
||||||
;;
|
;;
|
||||||
-u* | -U*)
|
-u* | -U*)
|
||||||
|
@ -101,39 +90,7 @@ index 88a3027..85beabe 100644
|
||||||
;;
|
;;
|
||||||
-obj | -OBJ)
|
-obj | -OBJ)
|
||||||
objs="$value"
|
objs="$value"
|
||||||
@@ -739,19 +724,19 @@ do
|
@@ -1207,12 +1192,12 @@
|
||||||
;;
|
|
||||||
esac
|
|
||||||
;;
|
|
||||||
- -dl | -DL)
|
|
||||||
- case $value in
|
|
||||||
- y* | Y*)
|
|
||||||
- deletelog=yes
|
|
||||||
- ;;
|
|
||||||
- n* | N*)
|
|
||||||
- deletelog=no
|
|
||||||
- ;;
|
|
||||||
- *)
|
|
||||||
- ;;
|
|
||||||
- esac
|
|
||||||
+ -dl | -DL)
|
|
||||||
+ case $value in
|
|
||||||
+ y* | Y*)
|
|
||||||
+ deletelog=yes
|
|
||||||
+ ;;
|
|
||||||
+ n* | N*)
|
|
||||||
+ deletelog=no
|
|
||||||
+ ;;
|
|
||||||
+ *)
|
|
||||||
+ ;;
|
|
||||||
+ esac
|
|
||||||
|
|
||||||
- ;;
|
|
||||||
+ ;;
|
|
||||||
-at | -AT)
|
|
||||||
att=$value
|
|
||||||
;;
|
|
||||||
@@ -1207,12 +1192,12 @@ post file $DIRPID/$pid.t16 or $DIRPID/$pid.t19 or $DIRPID/$pid.h5 not accessible
|
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
|
@ -149,16 +106,7 @@ index 88a3027..85beabe 100644
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
if test "$objs"
|
if test "$objs"
|
||||||
@@ -1386,7 +1371,7 @@ else
|
@@ -1531,7 +1516,7 @@
|
||||||
else
|
|
||||||
error="$error
|
|
||||||
job id required"
|
|
||||||
- fi
|
|
||||||
+fi
|
|
||||||
fi
|
|
||||||
|
|
||||||
case $qid in
|
|
||||||
@@ -1531,7 +1516,7 @@ Program name : $prog
|
|
||||||
Marc shared lib : $progdll
|
Marc shared lib : $progdll
|
||||||
Version type : $mode
|
Version type : $mode
|
||||||
Job ID : $DIRJID/$jid$extra_job_info
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
@ -167,16 +115,7 @@ index 88a3027..85beabe 100644
|
||||||
User objects/libs : $objs
|
User objects/libs : $objs
|
||||||
Restart file job ID : $rid
|
Restart file job ID : $rid
|
||||||
Substructure file ID : $sid
|
Substructure file ID : $sid
|
||||||
@@ -1548,8 +1533,6 @@ GPGPU option : $gpuids
|
@@ -1564,7 +1549,7 @@
|
||||||
Host file name : $host" > $jid.log
|
|
||||||
if test "$iprintsimufact" = true ; then
|
|
||||||
echo "DDM with ARC Mapper : $ddm_arc" >> $jid.log
|
|
||||||
- echo "Mapper directory : $MESHERDIR" >> $jid.log
|
|
||||||
- echo "Meshing directory : $MESHERDIR" >> $jid.log
|
|
||||||
fi
|
|
||||||
echo \
|
|
||||||
"Message passing type : $itree
|
|
||||||
@@ -1564,7 +1547,7 @@ Program name : $prog
|
|
||||||
Marc shared lib : $progdll
|
Marc shared lib : $progdll
|
||||||
Version type : $mode
|
Version type : $mode
|
||||||
Job ID : $DIRJID/$jid$extra_job_info
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
@ -185,16 +124,7 @@ index 88a3027..85beabe 100644
|
||||||
User objects/libs : $objs
|
User objects/libs : $objs
|
||||||
Restart file job ID : $rid
|
Restart file job ID : $rid
|
||||||
Substructure file ID : $sid
|
Substructure file ID : $sid
|
||||||
@@ -1579,6 +1562,8 @@ Solver processes : $nsolverprint
|
@@ -1687,7 +1672,7 @@
|
||||||
Solver threads : $ntsprint"
|
|
||||||
if test "$iprintsimufact" = true ; then
|
|
||||||
echo "DDM with ARC Mapper : $ddm_arc"
|
|
||||||
+ echo "Mapper directory : $MESHERDIR" >> $jid.log
|
|
||||||
+ echo "Meshing directory : $MESHERDIR" >> $jid.log
|
|
||||||
fi
|
|
||||||
echo \
|
|
||||||
"GPGPU option : $gpuids
|
|
||||||
@@ -1687,7 +1672,7 @@ Program name ($prog)? $ECHOTXT"
|
|
||||||
;;
|
;;
|
||||||
esac
|
esac
|
||||||
fi
|
fi
|
||||||
|
@ -203,7 +133,7 @@ index 88a3027..85beabe 100644
|
||||||
read value
|
read value
|
||||||
if test "$value"
|
if test "$value"
|
||||||
then
|
then
|
||||||
@@ -1696,50 +1681,19 @@ Program name ($prog)? $ECHOTXT"
|
@@ -1696,50 +1681,19 @@
|
||||||
user=
|
user=
|
||||||
;;
|
;;
|
||||||
*)
|
*)
|
||||||
|
@ -229,16 +159,13 @@ index 88a3027..85beabe 100644
|
||||||
- fi
|
- fi
|
||||||
+ user=$value
|
+ user=$value
|
||||||
case $user in
|
case $user in
|
||||||
- \/*)
|
\/*)
|
||||||
- ;;
|
;;
|
||||||
- *)
|
*)
|
||||||
+ \/*)
|
|
||||||
+ ;;
|
|
||||||
+ *)
|
|
||||||
user=`pwd`/$user
|
user=`pwd`/$user
|
||||||
- usersubname=`pwd`/$usersubname
|
- usersubname=`pwd`/$usersubname
|
||||||
- ;;
|
;;
|
||||||
- esac
|
esac
|
||||||
- if test ! -f $usersubname
|
- if test ! -f $usersubname
|
||||||
- then
|
- then
|
||||||
- if test -f $usersubname.f
|
- if test -f $usersubname.f
|
||||||
|
@ -255,8 +182,6 @@ index 88a3027..85beabe 100644
|
||||||
- usersubname=$usersubname.F90
|
- usersubname=$usersubname.F90
|
||||||
- fi
|
- fi
|
||||||
- fi
|
- fi
|
||||||
+ ;;
|
|
||||||
+ esac
|
|
||||||
+ usernoext=$user
|
+ usernoext=$user
|
||||||
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
@ -265,7 +190,7 @@ index 88a3027..85beabe 100644
|
||||||
;;
|
;;
|
||||||
esac
|
esac
|
||||||
fi
|
fi
|
||||||
@@ -2274,11 +2228,12 @@ fi
|
@@ -2274,11 +2228,12 @@
|
||||||
#
|
#
|
||||||
# user subroutine used
|
# user subroutine used
|
||||||
#
|
#
|
||||||
|
@ -280,7 +205,7 @@ index 88a3027..85beabe 100644
|
||||||
case $program in
|
case $program in
|
||||||
\/* | \.\/*)
|
\/* | \.\/*)
|
||||||
bd=
|
bd=
|
||||||
@@ -2391,7 +2346,7 @@ fi
|
@@ -2391,7 +2346,7 @@
|
||||||
fi
|
fi
|
||||||
if test "$user"
|
if test "$user"
|
||||||
then
|
then
|
||||||
|
@ -289,7 +214,7 @@ index 88a3027..85beabe 100644
|
||||||
usersub=1
|
usersub=1
|
||||||
fi
|
fi
|
||||||
export execpath
|
export execpath
|
||||||
@@ -3274,44 +3229,27 @@ then
|
@@ -3274,44 +3229,27 @@
|
||||||
echo
|
echo
|
||||||
if test "$user"
|
if test "$user"
|
||||||
then
|
then
|
||||||
|
@ -303,7 +228,7 @@ index 88a3027..85beabe 100644
|
||||||
- usersub=$usersubname
|
- usersub=$usersubname
|
||||||
- fi
|
- fi
|
||||||
-
|
-
|
||||||
+ userobj=$usermoext.o
|
+ userobj=$usernoext.o
|
||||||
fi
|
fi
|
||||||
cat > $jid.runmarcscript << END4
|
cat > $jid.runmarcscript << END4
|
||||||
if test "$user"
|
if test "$user"
|
||||||
|
@ -315,7 +240,7 @@ index 88a3027..85beabe 100644
|
||||||
if test $MACHINENAME = "CRAY"
|
if test $MACHINENAME = "CRAY"
|
||||||
then
|
then
|
||||||
- $FORTRAN $usersub || \
|
- $FORTRAN $usersub || \
|
||||||
+ $DFORTRANMP $user || \
|
+ $DFORTHIGHMP $user || \
|
||||||
{
|
{
|
||||||
- echo "$0: compile failed for $user.f"
|
- echo "$0: compile failed for $user.f"
|
||||||
+ echo "$0: compile failed for $user"
|
+ echo "$0: compile failed for $user"
|
||||||
|
@ -324,7 +249,7 @@ index 88a3027..85beabe 100644
|
||||||
/bin/rm $program 2>/dev/null
|
/bin/rm $program 2>/dev/null
|
||||||
else
|
else
|
||||||
- $FORTRAN $usersub -o $userobj || \
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
+ $DFORTRANMP $user -o $userobj || \
|
+ $DFORTHIGHMP $user -o $userobj || \
|
||||||
{
|
{
|
||||||
- echo "$0: compile failed for $user.f"
|
- echo "$0: compile failed for $user.f"
|
||||||
+ echo "$0: compile failed for $user"
|
+ echo "$0: compile failed for $user"
|
||||||
|
@ -339,21 +264,15 @@ index 88a3027..85beabe 100644
|
||||||
fi
|
fi
|
||||||
|
|
||||||
|
|
||||||
@@ -3331,10 +3269,11 @@ then
|
@@ -3331,6 +3269,7 @@
|
||||||
$TKLIBS \
|
$TKLIBS \
|
||||||
$MRCLIBS \
|
$MRCLIBS \
|
||||||
$METISLIBS \
|
$METISLIBS \
|
||||||
- $SFLIB \
|
|
||||||
+ $DAMASK \
|
+ $DAMASK \
|
||||||
+ $SFLIB \
|
$SFLIB \
|
||||||
$OPENSSL_LIB \
|
$OPENSSL_LIB \
|
||||||
$SYSLIBS \
|
$SYSLIBS \
|
||||||
- $SECLIBS || \
|
@@ -3344,6 +3283,9 @@
|
||||||
+ $SECLIBS || \
|
|
||||||
{
|
|
||||||
echo "$0: link failed for ${user:+$userobj }$objs"
|
|
||||||
exit 1
|
|
||||||
@@ -3344,6 +3283,9 @@ else
|
|
||||||
prgsav=yes
|
prgsav=yes
|
||||||
fi
|
fi
|
||||||
/bin/rm $userobj 2>/dev/null
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
@ -363,7 +282,7 @@ index 88a3027..85beabe 100644
|
||||||
|
|
||||||
#
|
#
|
||||||
# run marc
|
# run marc
|
||||||
@@ -3390,7 +3332,7 @@ if test $dllrun -eq 0; then
|
@@ -3390,7 +3332,7 @@
|
||||||
fi
|
fi
|
||||||
else
|
else
|
||||||
if test $cpdll = yes; then
|
if test $cpdll = yes; then
|
||||||
|
@ -372,7 +291,7 @@ index 88a3027..85beabe 100644
|
||||||
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
fi
|
fi
|
||||||
if test $rmdll = yes
|
if test $rmdll = yes
|
||||||
@@ -3556,7 +3498,7 @@ then
|
@@ -3556,7 +3498,7 @@
|
||||||
# first copy over the user sub if local directories
|
# first copy over the user sub if local directories
|
||||||
if test ${dirstatus[$counter]} = "local"
|
if test ${dirstatus[$counter]} = "local"
|
||||||
then
|
then
|
||||||
|
@ -381,12 +300,12 @@ index 88a3027..85beabe 100644
|
||||||
fi
|
fi
|
||||||
# do the compilation on the other machine
|
# do the compilation on the other machine
|
||||||
if test ${dirstatus[$counter]} = "shared"
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
@@ -3569,21 +3511,21 @@ then
|
@@ -3569,21 +3511,21 @@
|
||||||
remoteuser=$DIR1/`$BASENAME $user`
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
echo
|
echo
|
||||||
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
+ $RSH $i $DIR2/tools/comp_damask_mp $DIR2 $DIR1 $remoteuser $remoteprog
|
+ $RSH $i $DIR2/tools/comp_damask_hmp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
# check if successful, the new executable should be there
|
# check if successful, the new executable should be there
|
||||||
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
if test "$line"
|
if test "$line"
|
||||||
|
@ -406,7 +325,7 @@ index 88a3027..85beabe 100644
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
@@ -3593,39 +3535,27 @@ then
|
@@ -3593,39 +3535,27 @@
|
||||||
if test "$userhost"
|
if test "$userhost"
|
||||||
then
|
then
|
||||||
echo
|
echo
|
||||||
|
@ -426,7 +345,7 @@ index 88a3027..85beabe 100644
|
||||||
if test $MACHINENAME = "CRAY"
|
if test $MACHINENAME = "CRAY"
|
||||||
then
|
then
|
||||||
- $FORTRAN $usersub || \
|
- $FORTRAN $usersub || \
|
||||||
+ $DFORTRANMP $user || \
|
+ $DFORTHIGHMP $user || \
|
||||||
{
|
{
|
||||||
- echo "$0: compile failed for $user.f"
|
- echo "$0: compile failed for $user.f"
|
||||||
+ echo "$0: compile failed for $user"
|
+ echo "$0: compile failed for $user"
|
||||||
|
@ -436,7 +355,7 @@ index 88a3027..85beabe 100644
|
||||||
/bin/rm $program 2>/dev/null
|
/bin/rm $program 2>/dev/null
|
||||||
else
|
else
|
||||||
- $FORTRAN $usersub -o $userobj || \
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
+ $DFORTRANMP $user -o $userobj || \
|
+ $DFORTHIGHMP $user -o $userobj || \
|
||||||
{
|
{
|
||||||
- echo "$0: compile failed for $user.f"
|
- echo "$0: compile failed for $user.f"
|
||||||
+ echo "$0: compile failed for $user"
|
+ echo "$0: compile failed for $user"
|
||||||
|
@ -452,21 +371,15 @@ index 88a3027..85beabe 100644
|
||||||
fi # if test $user
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
@@ -3645,10 +3575,11 @@ then
|
@@ -3645,6 +3575,7 @@
|
||||||
$TKLIBS \
|
$TKLIBS \
|
||||||
$MRCLIBS \
|
$MRCLIBS \
|
||||||
$METISLIBS \
|
$METISLIBS \
|
||||||
- $SFLIB \
|
|
||||||
+ $DAMASK \
|
+ $DAMASK \
|
||||||
+ $SFLIB \
|
$SFLIB \
|
||||||
$OPENSSL_LIB \
|
$OPENSSL_LIB \
|
||||||
$SYSLIBS \
|
$SYSLIBS \
|
||||||
- $SECLIBS || \
|
@@ -3686,6 +3617,9 @@
|
||||||
+ $SECLIBS || \
|
|
||||||
{
|
|
||||||
echo "$0: link failed for ${user:+$userobj }$objs"
|
|
||||||
echo " $PRODUCT Exit number 3"
|
|
||||||
@@ -3686,6 +3617,9 @@ else # if test $link
|
|
||||||
prgsav=yes
|
prgsav=yes
|
||||||
fi # if test $link
|
fi # if test $link
|
||||||
/bin/rm $userobj 2>/dev/null
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
@ -476,69 +389,7 @@ index 88a3027..85beabe 100644
|
||||||
|
|
||||||
#
|
#
|
||||||
# run marc
|
# run marc
|
||||||
@@ -3744,42 +3678,42 @@ then
|
@@ -3779,7 +3713,7 @@
|
||||||
counter=0
|
|
||||||
if test -f "$host_filt"
|
|
||||||
then
|
|
||||||
- for i in `$AWK -v n=$numfield '{print $n}' $host_filt`
|
|
||||||
- do
|
|
||||||
- ibase=${i%%.*}
|
|
||||||
- if test $ibase != $thishost
|
|
||||||
+ for i in `$AWK -v n=$numfield '{print $n}' $host_filt`
|
|
||||||
+ do
|
|
||||||
+ ibase=${i%%.*}
|
|
||||||
+ if test $ibase != $thishost
|
|
||||||
+ then
|
|
||||||
+ counter=$((counter+1))
|
|
||||||
+ DIR1=$DIRJOB
|
|
||||||
+ line=`grep -v '^#' $userhost | grep "^$ibase "`
|
|
||||||
+ workdir=`echo $line | $AWK '{print $3}'`
|
|
||||||
+ if test -n "$workdir"
|
|
||||||
then
|
|
||||||
- counter=$((counter+1))
|
|
||||||
- DIR1=$DIRJOB
|
|
||||||
- line=`grep -v '^#' $userhost | grep "^$ibase "`
|
|
||||||
- workdir=`echo $line | $AWK '{print $3}'`
|
|
||||||
- if test -n "$workdir"
|
|
||||||
- then
|
|
||||||
- DIR1=$workdir
|
|
||||||
- fi
|
|
||||||
- # if an incompatible host uses shared directory,
|
|
||||||
- # then the root machine deletes the executable
|
|
||||||
- if test ${dirstatus[$counter]} = "shared" -a ${compstatus[$counter]} = "no"
|
|
||||||
- then
|
|
||||||
- hname=_$ibase
|
|
||||||
- /bin/rm ${execname}$hname
|
|
||||||
- fi
|
|
||||||
- # if local directory used, the remote machine
|
|
||||||
- # deletes the executable
|
|
||||||
- if test ${dirstatus[$counter]} = "local"
|
|
||||||
- then
|
|
||||||
- $RSH $i /bin/rm $DIR1/${execname} 2>/dev/null
|
|
||||||
- fi
|
|
||||||
+ DIR1=$workdir
|
|
||||||
fi
|
|
||||||
- done
|
|
||||||
- fi
|
|
||||||
+ # if an incompatible host uses shared directory,
|
|
||||||
+ # then the root machine deletes the executable
|
|
||||||
+ if test ${dirstatus[$counter]} = "shared" -a ${compstatus[$counter]} = "no"
|
|
||||||
+ then
|
|
||||||
+ hname=_$ibase
|
|
||||||
+ /bin/rm ${execname}$hname
|
|
||||||
+ fi
|
|
||||||
+ # if local directory used, the remote machine
|
|
||||||
+ # deletes the executable
|
|
||||||
+ if test ${dirstatus[$counter]} = "local"
|
|
||||||
+ then
|
|
||||||
+ $RSH $i /bin/rm $DIR1/${execname} 2>/dev/null
|
|
||||||
+ fi
|
|
||||||
+ fi
|
|
||||||
+ done
|
|
||||||
fi
|
|
||||||
fi
|
|
||||||
fi
|
|
||||||
+fi
|
|
||||||
else
|
else
|
||||||
#dllrun >0
|
#dllrun >0
|
||||||
if test $cpdll = yes; then
|
if test $cpdll = yes; then
|
||||||
|
@ -547,7 +398,7 @@ index 88a3027..85beabe 100644
|
||||||
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
fi
|
fi
|
||||||
if test $rmdll = yes;then
|
if test $rmdll = yes;then
|
||||||
@@ -3904,7 +3838,7 @@ then
|
@@ -3904,7 +3838,7 @@
|
||||||
# first copy over the user sub if local directories
|
# first copy over the user sub if local directories
|
||||||
if test ${dirstatus[$counter]} = "local"
|
if test ${dirstatus[$counter]} = "local"
|
||||||
then
|
then
|
||||||
|
@ -556,12 +407,12 @@ index 88a3027..85beabe 100644
|
||||||
fi
|
fi
|
||||||
# do the compilation on the other machine
|
# do the compilation on the other machine
|
||||||
if test ${dirstatus[$counter]} = "shared"
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
@@ -3917,20 +3851,20 @@ then
|
@@ -3917,20 +3851,20 @@
|
||||||
remoteuser=$DIR1/`$BASENAME $user`
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
echo
|
echo
|
||||||
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
+ $RSH $i $DIR2/tools/comp_damask_mp $DIR2 $DIR1 $remoteuser $remoteprog
|
+ $RSH $i $DIR2/tools/comp_damask_hmp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
# check if successful, the new executable should be there
|
# check if successful, the new executable should be there
|
||||||
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
if test "$line"
|
if test "$line"
|
||||||
|
@ -580,7 +431,7 @@ index 88a3027..85beabe 100644
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
fi
|
fi
|
||||||
@@ -3940,37 +3874,25 @@ then
|
@@ -3940,37 +3874,25 @@
|
||||||
if test "$userhost"
|
if test "$userhost"
|
||||||
then
|
then
|
||||||
echo
|
echo
|
||||||
|
@ -600,7 +451,7 @@ index 88a3027..85beabe 100644
|
||||||
if test $MACHINENAME = "CRAY"
|
if test $MACHINENAME = "CRAY"
|
||||||
then
|
then
|
||||||
- $FORTRAN $usersub || \
|
- $FORTRAN $usersub || \
|
||||||
+ $DFORTRANMP $user || \
|
+ $DFORTHIGHMP $user || \
|
||||||
{
|
{
|
||||||
- echo "$0: compile failed for $user.f"
|
- echo "$0: compile failed for $user.f"
|
||||||
+ echo "$0: compile failed for $user"
|
+ echo "$0: compile failed for $user"
|
||||||
|
@ -609,7 +460,7 @@ index 88a3027..85beabe 100644
|
||||||
/bin/rm $program 2>/dev/null
|
/bin/rm $program 2>/dev/null
|
||||||
else
|
else
|
||||||
- $FORTRAN $usersub -o $userobj || \
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
+ $DFORTRANMP $user -o $userobj || \
|
+ $DFORTHIGHMP $user -o $userobj || \
|
||||||
{
|
{
|
||||||
- echo "$0: compile failed for $user.f"
|
- echo "$0: compile failed for $user.f"
|
||||||
+ echo "$0: compile failed for $user"
|
+ echo "$0: compile failed for $user"
|
||||||
|
@ -624,7 +475,7 @@ index 88a3027..85beabe 100644
|
||||||
fi # if test $user
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
@@ -3990,10 +3912,11 @@ then
|
@@ -3990,6 +3912,7 @@
|
||||||
$TKLIBS \
|
$TKLIBS \
|
||||||
$MRCLIBS \
|
$MRCLIBS \
|
||||||
$METISLIBS \
|
$METISLIBS \
|
||||||
|
@ -632,12 +483,7 @@ index 88a3027..85beabe 100644
|
||||||
$SFLIB \
|
$SFLIB \
|
||||||
$OPENSSL_LIB \
|
$OPENSSL_LIB \
|
||||||
$SYSLIBS \
|
$SYSLIBS \
|
||||||
- $SECLIBS || \
|
@@ -4030,7 +3953,9 @@
|
||||||
+ $SECLIBS || \
|
|
||||||
{
|
|
||||||
echo "$0: link failed for ${user:+$userobj }$objs"
|
|
||||||
exit 1
|
|
||||||
@@ -4030,7 +3953,9 @@ else # if test $link
|
|
||||||
prgsav=yes
|
prgsav=yes
|
||||||
fi # if test $link
|
fi # if test $link
|
||||||
/bin/rm $userobj 2>/dev/null
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
@ -648,78 +494,7 @@ index 88a3027..85beabe 100644
|
||||||
# done if no job id given
|
# done if no job id given
|
||||||
if test -z "$jid"
|
if test -z "$jid"
|
||||||
then
|
then
|
||||||
@@ -4070,7 +3995,7 @@ if test $ddm_arc -gt 0; then
|
@@ -4149,7 +4074,7 @@
|
||||||
RUN_JOB="$BINDIR/exeddm $RUN_JOB -ddm $ddm_arc "
|
|
||||||
fi
|
|
||||||
|
|
||||||
-$RUN_JOB
|
|
||||||
+ $RUN_JOB
|
|
||||||
|
|
||||||
if test $nprocd -gt 1
|
|
||||||
then
|
|
||||||
@@ -4114,42 +4039,42 @@ then
|
|
||||||
counter=0
|
|
||||||
if test -f "$host_filt"
|
|
||||||
then
|
|
||||||
- for i in `$AWK -v n=$numfield '{print $n}' $host_filt`
|
|
||||||
- do
|
|
||||||
- ibase=${i%%.*}
|
|
||||||
- if test $ibase != $thishost
|
|
||||||
+ for i in `$AWK -v n=$numfield '{print $n}' $host_filt`
|
|
||||||
+ do
|
|
||||||
+ ibase=${i%%.*}
|
|
||||||
+ if test $ibase != $thishost
|
|
||||||
+ then
|
|
||||||
+ counter=$((counter+1))
|
|
||||||
+ DIR1=$DIRJOB
|
|
||||||
+ line=`grep -v '^#' $userhost | grep "^$ibase "`
|
|
||||||
+ workdir=`echo $line | $AWK '{print $3}'`
|
|
||||||
+ if test -n "$workdir"
|
|
||||||
then
|
|
||||||
- counter=$((counter+1))
|
|
||||||
- DIR1=$DIRJOB
|
|
||||||
- line=`grep -v '^#' $userhost | grep "^$ibase "`
|
|
||||||
- workdir=`echo $line | $AWK '{print $3}'`
|
|
||||||
- if test -n "$workdir"
|
|
||||||
- then
|
|
||||||
- DIR1=$workdir
|
|
||||||
- fi
|
|
||||||
- # if an incompatible host uses shared directory,
|
|
||||||
- # then the root machine deletes the executable
|
|
||||||
- if test ${dirstatus[$counter]} = "shared" -a ${compstatus[$counter]} = "no"
|
|
||||||
- then
|
|
||||||
- hname=_$ibase
|
|
||||||
- /bin/rm ${execname}$hname
|
|
||||||
- fi
|
|
||||||
- # if local directory used, the remote machine
|
|
||||||
- # deletes the executable
|
|
||||||
- if test ${dirstatus[$counter]} = "local"
|
|
||||||
- then
|
|
||||||
- $RSH $i /bin/rm $DIR1/${execname} 2>/dev/null
|
|
||||||
- fi
|
|
||||||
+ DIR1=$workdir
|
|
||||||
fi
|
|
||||||
- done
|
|
||||||
- fi
|
|
||||||
+ # if an incompatible host uses shared directory,
|
|
||||||
+ # then the root machine deletes the executable
|
|
||||||
+ if test ${dirstatus[$counter]} = "shared" -a ${compstatus[$counter]} = "no"
|
|
||||||
+ then
|
|
||||||
+ hname=_$ibase
|
|
||||||
+ /bin/rm ${execname}$hname
|
|
||||||
+ fi
|
|
||||||
+ # if local directory used, the remote machine
|
|
||||||
+ # deletes the executable
|
|
||||||
+ if test ${dirstatus[$counter]} = "local"
|
|
||||||
+ then
|
|
||||||
+ $RSH $i /bin/rm $DIR1/${execname} 2>/dev/null
|
|
||||||
+ fi
|
|
||||||
+ fi
|
|
||||||
+ done
|
|
||||||
fi
|
|
||||||
fi
|
|
||||||
fi
|
|
||||||
+fi
|
|
||||||
else
|
else
|
||||||
#dllrun >0
|
#dllrun >0
|
||||||
if test $cpdll = yes; then
|
if test $cpdll = yes; then
|
||||||
|
|
|
@ -1,6 +1,6 @@
|
||||||
---
|
---
|
||||||
+++
|
+++
|
||||||
@@ -63,10 +64,10 @@ doe_nparallel=$6
|
@@ -63,10 +63,10 @@
|
||||||
if [ "$slv" != "" -a "$slv" != "marc" -a "$slv" != "datfit" ]; then
|
if [ "$slv" != "" -a "$slv" != "marc" -a "$slv" != "datfit" ]; then
|
||||||
slv="-iam sfm"
|
slv="-iam sfm"
|
||||||
fi
|
fi
|
||||||
|
@ -13,7 +13,7 @@
|
||||||
slv="-iam datfit"
|
slv="-iam datfit"
|
||||||
fi
|
fi
|
||||||
|
|
||||||
@@ -91,6 +92,7 @@ if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
|
@@ -91,6 +91,7 @@
|
||||||
srcfile="-u $srcfile -save y"
|
srcfile="-u $srcfile -save y"
|
||||||
;;
|
;;
|
||||||
runsaved)
|
runsaved)
|
||||||
|
@ -21,7 +21,7 @@
|
||||||
srcfile="-prog $srcfile"
|
srcfile="-prog $srcfile"
|
||||||
;;
|
;;
|
||||||
esac
|
esac
|
||||||
@@ -189,12 +191,12 @@ unset PYTHONHOME
|
@@ -189,12 +190,12 @@
|
||||||
unset PYTHONPATH
|
unset PYTHONPATH
|
||||||
|
|
||||||
if [ "$doe_first" = "-" ]; then # submit of regular Marc job
|
if [ "$doe_first" = "-" ]; then # submit of regular Marc job
|
||||||
|
|
|
@ -1,6 +1,6 @@
|
||||||
---
|
---
|
||||||
+++
|
+++
|
||||||
@@ -63,10 +64,10 @@ doe_nparallel=$6
|
@@ -63,10 +63,10 @@
|
||||||
if [ "$slv" != "" -a "$slv" != "marc" -a "$slv" != "datfit" ]; then
|
if [ "$slv" != "" -a "$slv" != "marc" -a "$slv" != "datfit" ]; then
|
||||||
slv="-iam sfm"
|
slv="-iam sfm"
|
||||||
fi
|
fi
|
||||||
|
@ -13,7 +13,7 @@
|
||||||
slv="-iam datfit"
|
slv="-iam datfit"
|
||||||
fi
|
fi
|
||||||
|
|
||||||
@@ -91,6 +92,7 @@ if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
|
@@ -91,6 +91,7 @@
|
||||||
srcfile="-u $srcfile -save y"
|
srcfile="-u $srcfile -save y"
|
||||||
;;
|
;;
|
||||||
runsaved)
|
runsaved)
|
||||||
|
@ -21,7 +21,7 @@
|
||||||
srcfile="-prog $srcfile"
|
srcfile="-prog $srcfile"
|
||||||
;;
|
;;
|
||||||
esac
|
esac
|
||||||
@@ -189,12 +191,12 @@ unset PYTHONHOME
|
@@ -189,12 +190,12 @@
|
||||||
unset PYTHONPATH
|
unset PYTHONPATH
|
||||||
|
|
||||||
if [ "$doe_first" = "-" ]; then # submit of regular Marc job
|
if [ "$doe_first" = "-" ]; then # submit of regular Marc job
|
||||||
|
|
|
@ -1,6 +1,6 @@
|
||||||
---
|
---
|
||||||
+++
|
+++
|
||||||
@@ -63,10 +64,10 @@ doe_nparallel=$6
|
@@ -63,10 +63,10 @@
|
||||||
if [ "$slv" != "" -a "$slv" != "marc" -a "$slv" != "datfit" ]; then
|
if [ "$slv" != "" -a "$slv" != "marc" -a "$slv" != "datfit" ]; then
|
||||||
slv="-iam sfm"
|
slv="-iam sfm"
|
||||||
fi
|
fi
|
||||||
|
@ -13,7 +13,7 @@
|
||||||
slv="-iam datfit"
|
slv="-iam datfit"
|
||||||
fi
|
fi
|
||||||
|
|
||||||
@@ -91,6 +92,7 @@ if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
|
@@ -91,6 +91,7 @@
|
||||||
srcfile="-u $srcfile -save y"
|
srcfile="-u $srcfile -save y"
|
||||||
;;
|
;;
|
||||||
runsaved)
|
runsaved)
|
||||||
|
@ -21,7 +21,7 @@
|
||||||
srcfile="-prog $srcfile"
|
srcfile="-prog $srcfile"
|
||||||
;;
|
;;
|
||||||
esac
|
esac
|
||||||
@@ -189,12 +191,12 @@ unset PYTHONHOME
|
@@ -189,12 +190,12 @@
|
||||||
unset PYTHONPATH
|
unset PYTHONPATH
|
||||||
|
|
||||||
if [ "$doe_first" = "-" ]; then # submit of regular Marc job
|
if [ "$doe_first" = "-" ]; then # submit of regular Marc job
|
||||||
|
|
|
@ -1,6 +1,6 @@
|
||||||
---
|
---
|
||||||
+++
|
+++
|
||||||
@@ -261,11 +261,18 @@ popmenu job_run_popmenu {
|
@@ -261,12 +261,19 @@
|
||||||
}
|
}
|
||||||
button {
|
button {
|
||||||
position +25 =
|
position +25 =
|
||||||
|
@ -10,21 +10,21 @@
|
||||||
help "job_run#Job Submission And Control"
|
help "job_run#Job Submission And Control"
|
||||||
popmenu job_submit_adv_pm
|
popmenu job_submit_adv_pm
|
||||||
}
|
}
|
||||||
+ button {
|
button {
|
||||||
+ position +18 =
|
+ position +18 =
|
||||||
+ size 7 4
|
+ size 7 4
|
||||||
+ text "DAMASK"
|
+ text "DAMASK"
|
||||||
+ help "damask_run#Job Submission And Control"
|
+ help "damask_run#Job Submission And Control"
|
||||||
+ popmenu damask
|
+ popmenu damask
|
||||||
+ }
|
+ }
|
||||||
button {
|
+ button {
|
||||||
position 0 +4
|
position 0 +4
|
||||||
size 12 4
|
size 12 4
|
||||||
@@ -1189,6 +1196,135 @@ popmenu job_submit_adv_pm {
|
text "UPDATE"
|
||||||
}
|
@@ -1190,6 +1197,135 @@
|
||||||
|
|
||||||
|
|
||||||
+#--------------------------------------------------------------------------------------------------
|
#--------------------------------------------------------------------------------------------------
|
||||||
+popmenu damask {
|
+popmenu damask {
|
||||||
+
|
+
|
||||||
+#ifdef QT_MENTAT
|
+#ifdef QT_MENTAT
|
||||||
|
@ -67,7 +67,7 @@
|
||||||
+ label {
|
+ label {
|
||||||
+ position -32 +6
|
+ position -32 +6
|
||||||
+ size 12 6
|
+ size 12 6
|
||||||
+ text "O2 / OpenMP"
|
+ text "O3 / OpenMP"
|
||||||
+ border_width 1
|
+ border_width 1
|
||||||
+ border_color black
|
+ border_color black
|
||||||
+ }
|
+ }
|
||||||
|
@ -153,6 +153,7 @@
|
||||||
+ mode permanent
|
+ mode permanent
|
||||||
+}
|
+}
|
||||||
+
|
+
|
||||||
#--------------------------------------------------------------------------------------------------
|
+#--------------------------------------------------------------------------------------------------
|
||||||
popmenu job_exit_msg_pm {
|
popmenu job_exit_msg_pm {
|
||||||
|
|
||||||
|
text "EXIT MESSAGE"
|
||||||
|
|
|
@ -0,0 +1,49 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -6,18 +6,27 @@
|
||||||
|
DIR=$1
|
||||||
|
user=$3
|
||||||
|
program=$4
|
||||||
|
+usernoext=$user
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
+
|
||||||
|
+# add BLAS options for linking
|
||||||
|
+ BLAS="%BLAS%"
|
||||||
|
+
|
||||||
|
. $DIR/tools/include
|
||||||
|
DIRJOB=$2
|
||||||
|
cd $DIRJOB
|
||||||
|
-echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
+echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
echo "program: $program"
|
||||||
|
- $FORTRAN $user.f || \
|
||||||
|
+ $DFORTHIGHMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
- userobj=$user.o
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
|
||||||
|
|
||||||
|
$LOAD ${program} $DIR/lib/main.o\
|
||||||
|
@@ -33,9 +42,13 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $BLAS \
|
||||||
|
$SYSLIBS || \
|
||||||
|
{
|
||||||
|
- echo "$0: link failed for $user.o on host `hostname`"
|
||||||
|
+ echo "$0: link failed for $usernoext.o on host `hostname`"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $userobj
|
||||||
|
+ /bin/rm $DIRJOB/*.mod
|
||||||
|
+ /bin/rm $DIRJOB/*.smod
|
||||||
|
+ /bin/rm $DIRJOB/*_genmod.f90
|
|
@ -0,0 +1,49 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -6,18 +6,27 @@
|
||||||
|
DIR=$1
|
||||||
|
user=$3
|
||||||
|
program=$4
|
||||||
|
+usernoext=$user
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
+
|
||||||
|
+# add BLAS options for linking
|
||||||
|
+ BLAS="%BLAS%"
|
||||||
|
+
|
||||||
|
. $DIR/tools/include
|
||||||
|
DIRJOB=$2
|
||||||
|
cd $DIRJOB
|
||||||
|
-echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
+echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
echo "program: $program"
|
||||||
|
- $FORTRAN $user.f || \
|
||||||
|
+ $DFORTRANLOWMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
- userobj=$user.o
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
|
||||||
|
|
||||||
|
$LOAD ${program} $DIR/lib/main.o\
|
||||||
|
@@ -33,9 +42,13 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $BLAS \
|
||||||
|
$SYSLIBS || \
|
||||||
|
{
|
||||||
|
- echo "$0: link failed for $user.o on host `hostname`"
|
||||||
|
+ echo "$0: link failed for $usernoext.o on host `hostname`"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $userobj
|
||||||
|
+ /bin/rm $DIRJOB/*.mod
|
||||||
|
+ /bin/rm $DIRJOB/*.smod
|
||||||
|
+ /bin/rm $DIRJOB/*_genmod.f90
|
|
@ -0,0 +1,49 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -6,18 +6,27 @@
|
||||||
|
DIR=$1
|
||||||
|
user=$3
|
||||||
|
program=$4
|
||||||
|
+usernoext=$user
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
+
|
||||||
|
+# add BLAS options for linking
|
||||||
|
+ BLAS="%BLAS%"
|
||||||
|
+
|
||||||
|
. $DIR/tools/include
|
||||||
|
DIRJOB=$2
|
||||||
|
cd $DIRJOB
|
||||||
|
-echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
+echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
echo "program: $program"
|
||||||
|
- $FORTRAN $user.f || \
|
||||||
|
+ $DFORTRANMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
- userobj=$user.o
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
|
||||||
|
|
||||||
|
$LOAD ${program} $DIR/lib/main.o\
|
||||||
|
@@ -33,9 +42,13 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $BLAS \
|
||||||
|
$SYSLIBS || \
|
||||||
|
{
|
||||||
|
- echo "$0: link failed for $user.o on host `hostname`"
|
||||||
|
+ echo "$0: link failed for $usernoext.o on host `hostname`"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $userobj
|
||||||
|
+ /bin/rm $DIRJOB/*.mod
|
||||||
|
+ /bin/rm $DIRJOB/*.smod
|
||||||
|
+ /bin/rm $DIRJOB/*_genmod.f90
|
|
@ -0,0 +1,75 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -166,6 +166,15 @@
|
||||||
|
MARC_COSIM_LIB="$MSCCOSIM_HOME/CoSim$MSCCOSIM_VERSION/Dcosim$MSCCOSIM_VERSION/lib"
|
||||||
|
fi
|
||||||
|
|
||||||
|
+# DAMASK uses the HDF5 compiler wrapper around the Intel compiler
|
||||||
|
+H5FC=$(h5fc -shlib -show)
|
||||||
|
+if [[ "$H5FC" == *"$dir is"* ]]; then
|
||||||
|
+ H5FC=$(echo $(echo "$H5FC" | tail -n1) | sed -e "s/\-shlib/-fPIC -qopenmp/g")
|
||||||
|
+ H5FC=${H5FC%-lmpifort*}
|
||||||
|
+fi
|
||||||
|
+HDF5_LIB=${H5FC//*ifort/}
|
||||||
|
+FCOMP="$H5FC"
|
||||||
|
+
|
||||||
|
# AEM
|
||||||
|
if test "$MARCDLLOUTDIR" = ""; then
|
||||||
|
DLLOUTDIR="$MARC_LIB"
|
||||||
|
@@ -594,7 +603,7 @@
|
||||||
|
PROFILE=" $PROFILE -pg"
|
||||||
|
fi
|
||||||
|
|
||||||
|
-FORT_OPT="-c -assume byterecl -safe_cray_ptr -mp1 -WB -fp-model source"
|
||||||
|
+FORT_OPT="-c -implicitnone -stand f18 -standard-semantics -assume nostd_mod_proc_name -safe_cray_ptr -mp1 -WB -fp-model source"
|
||||||
|
if test "$MTHREAD" = "OPENMP"
|
||||||
|
then
|
||||||
|
FORT_OPT=" $FORT_OPT -qopenmp"
|
||||||
|
@@ -607,7 +616,7 @@
|
||||||
|
FORT_OPT=" $FORT_OPT -save -zero"
|
||||||
|
fi
|
||||||
|
if test "$MARCHDF_HDF" = "HDF"; then
|
||||||
|
- FORT_OPT="$FORT_OPT -DMARCHDF_HDF=$MARCHDF_HDF $HDF_INCLUDE"
|
||||||
|
+ FORT_OPT="$FORT_OPT -DMARCHDF=$MARCHDF_HDF"
|
||||||
|
fi
|
||||||
|
|
||||||
|
FORTLOW="$FCOMP $FORT_OPT $PROFILE -O0 $I8FFLAGS -I$MARC_SOURCE/common \
|
||||||
|
@@ -621,6 +630,29 @@
|
||||||
|
# for compiling free form f90 files. high opt, integer(4)
|
||||||
|
FORTF90="$FCOMP -c -O3"
|
||||||
|
|
||||||
|
+# determine DAMASK version
|
||||||
|
+if test -n "$DAMASK_USER"; then
|
||||||
|
+ DAMASKROOT=`dirname $DAMASK_USER`/../..
|
||||||
|
+ read DAMASKVERSION < $DAMASKROOT/VERSION
|
||||||
|
+ DAMASKVERSION="'"$DAMASKVERSION"'"
|
||||||
|
+else
|
||||||
|
+ DAMASKVERSION="'N/A'"
|
||||||
|
+fi
|
||||||
|
+
|
||||||
|
+# DAMASK compiler calls
|
||||||
|
+DFORTLOWMP="$FCOMP -c -O0 -qno-offload -implicitnone -stand f18 -standard-semantics -assume nostd_mod_proc_name -safe_cray_ptr $PROFILE -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
|
||||||
|
+ -fpp -ftz -diag-disable 5268 -warn declarations -warn general -warn usage -warn interfaces -warn ignore_loc -warn alignments -DMARC4DAMASK=2022.2 -DDAMASKVERSION=$DAMASKVERSION \
|
||||||
|
+ -qopenmp -qopenmp-threadprivate=compat\
|
||||||
|
+ $MUMPS_INCLUDE $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS -I$KDTREE2_MOD -I$MARC_MOD"
|
||||||
|
+DFORTRANMP="$FCOMP -c -O1 -qno-offload -implicitnone -stand f18 -standard-semantics -assume nostd_mod_proc_name -safe_cray_ptr $PROFILE -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
|
||||||
|
+ -fpp -ftz -diag-disable 5268 -warn declarations -warn general -warn usage -warn interfaces -warn ignore_loc -warn alignments -DMARC4DAMASK=2022.2 -DDAMASKVERSION=$DAMASKVERSION \
|
||||||
|
+ -qopenmp -qopenmp-threadprivate=compat\
|
||||||
|
+ $MUMPS_INCLUDE $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS -I$KDTREE2_MOD -I$MARC_MOD"
|
||||||
|
+DFORTHIGHMP="$FCOMP -c -O3 -qno-offload -implicitnone -stand f18 -standard-semantics -assume nostd_mod_proc_name -safe_cray_ptr $PROFILE -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
|
||||||
|
+ -fpp -ftz -diag-disable 5268 -warn declarations -warn general -warn usage -warn interfaces -warn ignore_loc -warn alignments -DMARC4DAMASK=2022.2 -DDAMASKVERSION=$DAMASKVERSION \
|
||||||
|
+ -qopenmp -qopenmp-threadprivate=compat\
|
||||||
|
+ $MUMPS_INCLUDE $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS -I$KDTREE2_MOD -I$MARC_MOD"
|
||||||
|
+
|
||||||
|
if test "$MARCDEBUG" = "ON"
|
||||||
|
then
|
||||||
|
FORTLOW="$FCOMP $FORT_OPT $PROFILE $I8FFLAGS -I$MARC_SOURCE/common \
|
||||||
|
@@ -778,7 +810,7 @@
|
||||||
|
|
||||||
|
SOLVERLIBS="${BCSSOLVERLIBS} ${VKISOLVERLIBS} ${CASISOLVERLIBS} ${MF2SOLVERLIBS} \
|
||||||
|
-L$MARC_MKL \
|
||||||
|
- $MARC_LIB/blas_src.a ${ACSI_LIB}/ACSI_MarcLib.a $KDTREE2_LIB/libkdtree2.a $MARC_LIB/libtetmeshinterface.a $MARC_LIB/libcaefatigueinterface.a -L$MARC_LIB -lmkl_blacs_intelmpi_ilp64 -lmkl_scalapack_ilp64 -lmkl_intel_ilp64 -lmkl_intel_thread -lmkl_core -liomp5 -ltetmesh -lmeshgems -lmg-tetra -lmeshgems_stubs $HDF_LIBS $SOLVER2LIBS"
|
||||||
|
+ $MARC_LIB/blas_src.a ${ACSI_LIB}/ACSI_MarcLib.a $KDTREE2_LIB/libkdtree2.a $MARC_LIB/libtetmeshinterface.a $MARC_LIB/libcaefatigueinterface.a -L$MARC_LIB -lmkl_blacs_intelmpi_ilp64 -lmkl_scalapack_ilp64 -lmkl_intel_ilp64 -lmkl_intel_thread -lmkl_core -liomp5 -ltetmesh -lmeshgems -lmg-tetra -lmeshgems_stubs $HDF5_LIB $SOLVER2LIBS"
|
||||||
|
|
||||||
|
SOLVERLIBS_DLL=${SOLVERLIBS}
|
||||||
|
if test "$AEM_DLL" -eq 1
|
|
@ -0,0 +1,517 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -136,6 +136,11 @@
|
||||||
|
# is created. For job running in the background, the log #
|
||||||
|
# file is always created. Default is "yes" #
|
||||||
|
##############################################################################
|
||||||
|
+# remove all Mentat paths from LD_LIBRARY_PATH
|
||||||
|
+LD_LIBRARY_PATH=:$LD_LIBRARY_PATH:
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH//+([!(:)])mentat2022.2+([!(:)])/:}
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH//+([(:)])/:}
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH#:}; LD_LIBRARY_PATH=${LD_LIBRARY_PATH%:}
|
||||||
|
# set DIR to the directory in which this script is
|
||||||
|
REALCOM="`/bin/ls -l $0 |awk '{ print $NF; }'`"
|
||||||
|
DIR=`dirname $REALCOM`
|
||||||
|
@@ -302,7 +307,23 @@
|
||||||
|
|
||||||
|
. "$DIR/getarch"
|
||||||
|
|
||||||
|
+
|
||||||
|
+# getting user subroutine file name
|
||||||
|
+found=0
|
||||||
|
+for i in "$@"; do
|
||||||
|
+ if test $found = 1; then
|
||||||
|
+ DAMASK_USER=$i
|
||||||
|
+ found=0
|
||||||
|
+ fi
|
||||||
|
+ case $i in
|
||||||
|
+ -u* | -U*)
|
||||||
|
+ found=1
|
||||||
|
+ ;;
|
||||||
|
+ esac
|
||||||
|
+done
|
||||||
|
+# sourcing include_linux64 (needs DAMASK_USER to be set)
|
||||||
|
. $MARC_INCLUDE
|
||||||
|
+
|
||||||
|
#
|
||||||
|
|
||||||
|
#
|
||||||
|
@@ -405,7 +426,7 @@
|
||||||
|
did=
|
||||||
|
vid=
|
||||||
|
user=
|
||||||
|
-usersubname=
|
||||||
|
+usernoext=
|
||||||
|
objs=
|
||||||
|
qid=background
|
||||||
|
cpu=
|
||||||
|
@@ -676,50 +697,19 @@
|
||||||
|
esac
|
||||||
|
;;
|
||||||
|
-u* | -U*)
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user
|
||||||
|
- basefile=`$BASENAME $value`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user.f
|
||||||
|
- elif test ${basefile##*.} = F
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F`
|
||||||
|
- usersubname=$user.F
|
||||||
|
- elif test ${basefile##*.} = f90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f90`
|
||||||
|
- usersubname=$user.f90
|
||||||
|
- elif test ${basefile##*.} = F90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F90`
|
||||||
|
- usersubname=$user.F90
|
||||||
|
- fi
|
||||||
|
+ user=$value
|
||||||
|
case $user in
|
||||||
|
\/*)
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
user=`pwd`/$user
|
||||||
|
- usersubname=`pwd`/$usersubname
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
- then
|
||||||
|
- if test -f $usersubname.f
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f
|
||||||
|
- elif test -f $usersubname.F
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F
|
||||||
|
- elif test -f $usersubname.f90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f90
|
||||||
|
- elif test -f $usersubname.F90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F90
|
||||||
|
- fi
|
||||||
|
- fi
|
||||||
|
+ usernoext=$user
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
;;
|
||||||
|
-obj | -OBJ)
|
||||||
|
objs="$value"
|
||||||
|
@@ -1207,12 +1197,12 @@
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
- if test "$usersubname"
|
||||||
|
+ if test "$user"
|
||||||
|
then
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
+ if test ! -f $user
|
||||||
|
then
|
||||||
|
error="$error
|
||||||
|
-user subroutine file $usersubname not accessible"
|
||||||
|
+user subroutine file $user not accessible"
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
if test "$objs"
|
||||||
|
@@ -1531,7 +1521,7 @@
|
||||||
|
Marc shared lib : $progdll
|
||||||
|
Version type : $mode
|
||||||
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
-User subroutine name : $usersubname
|
||||||
|
+User subroutine name : $user
|
||||||
|
User objects/libs : $objs
|
||||||
|
Restart file job ID : $rid
|
||||||
|
Substructure file ID : $sid
|
||||||
|
@@ -1564,7 +1554,7 @@
|
||||||
|
Marc shared lib : $progdll
|
||||||
|
Version type : $mode
|
||||||
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
-User subroutine name : $usersubname
|
||||||
|
+User subroutine name : $user
|
||||||
|
User objects/libs : $objs
|
||||||
|
Restart file job ID : $rid
|
||||||
|
Substructure file ID : $sid
|
||||||
|
@@ -1687,7 +1677,7 @@
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
fi
|
||||||
|
- $ECHO "User subroutine name ($usersubname)? $ECHOTXT"
|
||||||
|
+ $ECHO "User subroutine name ($user)? $ECHOTXT"
|
||||||
|
read value
|
||||||
|
if test "$value"
|
||||||
|
then
|
||||||
|
@@ -1696,50 +1686,19 @@
|
||||||
|
user=
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user
|
||||||
|
- basefile=`$BASENAME $value`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user.f
|
||||||
|
- elif test ${basefile##*.} = F
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F`
|
||||||
|
- usersubname=$user.F
|
||||||
|
- elif test ${basefile##*.} = f90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f90`
|
||||||
|
- usersubname=$user.f90
|
||||||
|
- elif test ${basefile##*.} = F90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F90`
|
||||||
|
- usersubname=$user.F90
|
||||||
|
- fi
|
||||||
|
+ user=$value
|
||||||
|
case $user in
|
||||||
|
\/*)
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
user=`pwd`/$user
|
||||||
|
- usersubname=`pwd`/$usersubname
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
- then
|
||||||
|
- if test -f $usersubname.f
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f
|
||||||
|
- elif test -f $usersubname.F
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F
|
||||||
|
- elif test -f $usersubname.f90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f90
|
||||||
|
- elif test -f $usersubname.F90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F90
|
||||||
|
- fi
|
||||||
|
- fi
|
||||||
|
+ usernoext=$user
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
fi
|
||||||
|
@@ -2274,11 +2233,12 @@
|
||||||
|
#
|
||||||
|
# user subroutine used
|
||||||
|
#
|
||||||
|
+# add DAMASK options for linking
|
||||||
|
+ DAMASK="-lstdc++"
|
||||||
|
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
-# program=$user.marc
|
||||||
|
- program=$DIRJOB/`$BASENAME $user .f`.marc
|
||||||
|
+ program=$usernoext.marc
|
||||||
|
case $program in
|
||||||
|
\/* | \.\/*)
|
||||||
|
bd=
|
||||||
|
@@ -2391,7 +2351,7 @@
|
||||||
|
fi
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- execpath=$DIRJOB/`$BASENAME $user .f`.marc
|
||||||
|
+ execpath=$usernoext.marc
|
||||||
|
usersub=1
|
||||||
|
fi
|
||||||
|
export execpath
|
||||||
|
@@ -3274,44 +3234,27 @@
|
||||||
|
echo
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
- fi
|
||||||
|
-
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
fi
|
||||||
|
cat > $jid.runmarcscript << END4
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- fi
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTHIGHMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTHIGHMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3331,6 +3274,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -3344,6 +3288,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
|
||||||
|
#
|
||||||
|
# run marc
|
||||||
|
@@ -3390,7 +3337,7 @@
|
||||||
|
fi
|
||||||
|
else
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes
|
||||||
|
@@ -3556,7 +3503,7 @@
|
||||||
|
# first copy over the user sub if local directories
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RCP $user.f $i:$DIR1/
|
||||||
|
+ $RCP $user $i:$DIR1/
|
||||||
|
fi
|
||||||
|
# do the compilation on the other machine
|
||||||
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
|
@@ -3569,21 +3516,21 @@
|
||||||
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
|
echo
|
||||||
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
+ $RSH $i $DIR2/tools/comp_damask_hmp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
# check if successful, the new executable should be there
|
||||||
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
|
if test "$line"
|
||||||
|
then
|
||||||
|
echo compilation and linking successful on host $i
|
||||||
|
else
|
||||||
|
- echo "$0: compile failed for $user.f on host $i"
|
||||||
|
+ echo "$0: compile failed for $user on host $i"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
fi
|
||||||
|
# remove the user subroutine on remote machine
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RSH $i /bin/rm $remoteuser.f 2> /dev/null
|
||||||
|
+ $RSH $i /bin/rm $remoteuser 2> /dev/null
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
@@ -3593,39 +3540,27 @@
|
||||||
|
if test "$userhost"
|
||||||
|
then
|
||||||
|
echo
|
||||||
|
- echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
- fi
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
+ echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
fi
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTHIGHMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTHIGHMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3645,6 +3580,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -3686,6 +3622,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi # if test $link
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
|
||||||
|
#
|
||||||
|
# run marc
|
||||||
|
@@ -3779,7 +3718,7 @@
|
||||||
|
else
|
||||||
|
#dllrun >0
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes;then
|
||||||
|
@@ -3904,7 +3843,7 @@
|
||||||
|
# first copy over the user sub if local directories
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RCP $user.f $i:$DIR1/
|
||||||
|
+ $RCP $user $i:$DIR1/
|
||||||
|
fi
|
||||||
|
# do the compilation on the other machine
|
||||||
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
|
@@ -3917,20 +3856,20 @@
|
||||||
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
|
echo
|
||||||
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
+ $RSH $i $DIR2/tools/comp_damask_hmp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
# check if successful, the new executable should be there
|
||||||
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
|
if test "$line"
|
||||||
|
then
|
||||||
|
echo compilation and linking successful on host $i
|
||||||
|
else
|
||||||
|
- echo "$0: compile failed for $user.f on host $i"
|
||||||
|
+ echo "$0: compile failed for $user on host $i"
|
||||||
|
exit 1
|
||||||
|
fi
|
||||||
|
# remove the user subroutine on remote machine
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RSH $i /bin/rm $remoteuser.f 2> /dev/null
|
||||||
|
+ $RSH $i /bin/rm $remoteuser 2> /dev/null
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
@@ -3940,37 +3879,25 @@
|
||||||
|
if test "$userhost"
|
||||||
|
then
|
||||||
|
echo
|
||||||
|
- echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
- fi
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
+ echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
fi
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTHIGHMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTHIGHMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3990,6 +3917,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -4030,7 +3958,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi # if test $link
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
-
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
# done if no job id given
|
||||||
|
if test -z "$jid"
|
||||||
|
then
|
||||||
|
@@ -4149,7 +4079,7 @@
|
||||||
|
else
|
||||||
|
#dllrun >0
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes;then
|
|
@ -0,0 +1,517 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -136,6 +136,11 @@
|
||||||
|
# is created. For job running in the background, the log #
|
||||||
|
# file is always created. Default is "yes" #
|
||||||
|
##############################################################################
|
||||||
|
+# remove all Mentat paths from LD_LIBRARY_PATH
|
||||||
|
+LD_LIBRARY_PATH=:$LD_LIBRARY_PATH:
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH//+([!(:)])mentat2022.2+([!(:)])/:}
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH//+([(:)])/:}
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH#:}; LD_LIBRARY_PATH=${LD_LIBRARY_PATH%:}
|
||||||
|
# set DIR to the directory in which this script is
|
||||||
|
REALCOM="`/bin/ls -l $0 |awk '{ print $NF; }'`"
|
||||||
|
DIR=`dirname $REALCOM`
|
||||||
|
@@ -302,7 +307,23 @@
|
||||||
|
|
||||||
|
. "$DIR/getarch"
|
||||||
|
|
||||||
|
+
|
||||||
|
+# getting user subroutine file name
|
||||||
|
+found=0
|
||||||
|
+for i in "$@"; do
|
||||||
|
+ if test $found = 1; then
|
||||||
|
+ DAMASK_USER=$i
|
||||||
|
+ found=0
|
||||||
|
+ fi
|
||||||
|
+ case $i in
|
||||||
|
+ -u* | -U*)
|
||||||
|
+ found=1
|
||||||
|
+ ;;
|
||||||
|
+ esac
|
||||||
|
+done
|
||||||
|
+# sourcing include_linux64 (needs DAMASK_USER to be set)
|
||||||
|
. $MARC_INCLUDE
|
||||||
|
+
|
||||||
|
#
|
||||||
|
|
||||||
|
#
|
||||||
|
@@ -405,7 +426,7 @@
|
||||||
|
did=
|
||||||
|
vid=
|
||||||
|
user=
|
||||||
|
-usersubname=
|
||||||
|
+usernoext=
|
||||||
|
objs=
|
||||||
|
qid=background
|
||||||
|
cpu=
|
||||||
|
@@ -676,50 +697,19 @@
|
||||||
|
esac
|
||||||
|
;;
|
||||||
|
-u* | -U*)
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user
|
||||||
|
- basefile=`$BASENAME $value`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user.f
|
||||||
|
- elif test ${basefile##*.} = F
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F`
|
||||||
|
- usersubname=$user.F
|
||||||
|
- elif test ${basefile##*.} = f90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f90`
|
||||||
|
- usersubname=$user.f90
|
||||||
|
- elif test ${basefile##*.} = F90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F90`
|
||||||
|
- usersubname=$user.F90
|
||||||
|
- fi
|
||||||
|
+ user=$value
|
||||||
|
case $user in
|
||||||
|
\/*)
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
user=`pwd`/$user
|
||||||
|
- usersubname=`pwd`/$usersubname
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
- then
|
||||||
|
- if test -f $usersubname.f
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f
|
||||||
|
- elif test -f $usersubname.F
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F
|
||||||
|
- elif test -f $usersubname.f90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f90
|
||||||
|
- elif test -f $usersubname.F90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F90
|
||||||
|
- fi
|
||||||
|
- fi
|
||||||
|
+ usernoext=$user
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
;;
|
||||||
|
-obj | -OBJ)
|
||||||
|
objs="$value"
|
||||||
|
@@ -1207,12 +1197,12 @@
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
- if test "$usersubname"
|
||||||
|
+ if test "$user"
|
||||||
|
then
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
+ if test ! -f $user
|
||||||
|
then
|
||||||
|
error="$error
|
||||||
|
-user subroutine file $usersubname not accessible"
|
||||||
|
+user subroutine file $user not accessible"
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
if test "$objs"
|
||||||
|
@@ -1531,7 +1521,7 @@
|
||||||
|
Marc shared lib : $progdll
|
||||||
|
Version type : $mode
|
||||||
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
-User subroutine name : $usersubname
|
||||||
|
+User subroutine name : $user
|
||||||
|
User objects/libs : $objs
|
||||||
|
Restart file job ID : $rid
|
||||||
|
Substructure file ID : $sid
|
||||||
|
@@ -1564,7 +1554,7 @@
|
||||||
|
Marc shared lib : $progdll
|
||||||
|
Version type : $mode
|
||||||
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
-User subroutine name : $usersubname
|
||||||
|
+User subroutine name : $user
|
||||||
|
User objects/libs : $objs
|
||||||
|
Restart file job ID : $rid
|
||||||
|
Substructure file ID : $sid
|
||||||
|
@@ -1687,7 +1677,7 @@
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
fi
|
||||||
|
- $ECHO "User subroutine name ($usersubname)? $ECHOTXT"
|
||||||
|
+ $ECHO "User subroutine name ($user)? $ECHOTXT"
|
||||||
|
read value
|
||||||
|
if test "$value"
|
||||||
|
then
|
||||||
|
@@ -1696,50 +1686,19 @@
|
||||||
|
user=
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user
|
||||||
|
- basefile=`$BASENAME $value`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user.f
|
||||||
|
- elif test ${basefile##*.} = F
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F`
|
||||||
|
- usersubname=$user.F
|
||||||
|
- elif test ${basefile##*.} = f90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f90`
|
||||||
|
- usersubname=$user.f90
|
||||||
|
- elif test ${basefile##*.} = F90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F90`
|
||||||
|
- usersubname=$user.F90
|
||||||
|
- fi
|
||||||
|
+ user=$value
|
||||||
|
case $user in
|
||||||
|
\/*)
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
user=`pwd`/$user
|
||||||
|
- usersubname=`pwd`/$usersubname
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
- then
|
||||||
|
- if test -f $usersubname.f
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f
|
||||||
|
- elif test -f $usersubname.F
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F
|
||||||
|
- elif test -f $usersubname.f90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f90
|
||||||
|
- elif test -f $usersubname.F90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F90
|
||||||
|
- fi
|
||||||
|
- fi
|
||||||
|
+ usernoext=$user
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
fi
|
||||||
|
@@ -2274,11 +2233,12 @@
|
||||||
|
#
|
||||||
|
# user subroutine used
|
||||||
|
#
|
||||||
|
+# add DAMASK options for linking
|
||||||
|
+ DAMASK="-lstdc++"
|
||||||
|
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
-# program=$user.marc
|
||||||
|
- program=$DIRJOB/`$BASENAME $user .f`.marc
|
||||||
|
+ program=$usernoext.marc
|
||||||
|
case $program in
|
||||||
|
\/* | \.\/*)
|
||||||
|
bd=
|
||||||
|
@@ -2391,7 +2351,7 @@
|
||||||
|
fi
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- execpath=$DIRJOB/`$BASENAME $user .f`.marc
|
||||||
|
+ execpath=$usernoext.marc
|
||||||
|
usersub=1
|
||||||
|
fi
|
||||||
|
export execpath
|
||||||
|
@@ -3274,44 +3234,27 @@
|
||||||
|
echo
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
- fi
|
||||||
|
-
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
fi
|
||||||
|
cat > $jid.runmarcscript << END4
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- fi
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTLOWMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTLOWMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3331,6 +3274,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -3344,6 +3288,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
|
||||||
|
#
|
||||||
|
# run marc
|
||||||
|
@@ -3390,7 +3337,7 @@
|
||||||
|
fi
|
||||||
|
else
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes
|
||||||
|
@@ -3556,7 +3503,7 @@
|
||||||
|
# first copy over the user sub if local directories
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RCP $user.f $i:$DIR1/
|
||||||
|
+ $RCP $user $i:$DIR1/
|
||||||
|
fi
|
||||||
|
# do the compilation on the other machine
|
||||||
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
|
@@ -3569,21 +3516,21 @@
|
||||||
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
|
echo
|
||||||
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
+ $RSH $i $DIR2/tools/comp_damask_lmp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
# check if successful, the new executable should be there
|
||||||
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
|
if test "$line"
|
||||||
|
then
|
||||||
|
echo compilation and linking successful on host $i
|
||||||
|
else
|
||||||
|
- echo "$0: compile failed for $user.f on host $i"
|
||||||
|
+ echo "$0: compile failed for $user on host $i"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
fi
|
||||||
|
# remove the user subroutine on remote machine
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RSH $i /bin/rm $remoteuser.f 2> /dev/null
|
||||||
|
+ $RSH $i /bin/rm $remoteuser 2> /dev/null
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
@@ -3593,39 +3540,27 @@
|
||||||
|
if test "$userhost"
|
||||||
|
then
|
||||||
|
echo
|
||||||
|
- echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
- fi
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
+ echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
fi
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTLOWMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTLOWMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3645,6 +3580,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -3686,6 +3622,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi # if test $link
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
|
||||||
|
#
|
||||||
|
# run marc
|
||||||
|
@@ -3779,7 +3718,7 @@
|
||||||
|
else
|
||||||
|
#dllrun >0
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes;then
|
||||||
|
@@ -3904,7 +3843,7 @@
|
||||||
|
# first copy over the user sub if local directories
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RCP $user.f $i:$DIR1/
|
||||||
|
+ $RCP $user $i:$DIR1/
|
||||||
|
fi
|
||||||
|
# do the compilation on the other machine
|
||||||
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
|
@@ -3917,20 +3856,20 @@
|
||||||
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
|
echo
|
||||||
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
+ $RSH $i $DIR2/tools/comp_damask_lmp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
# check if successful, the new executable should be there
|
||||||
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
|
if test "$line"
|
||||||
|
then
|
||||||
|
echo compilation and linking successful on host $i
|
||||||
|
else
|
||||||
|
- echo "$0: compile failed for $user.f on host $i"
|
||||||
|
+ echo "$0: compile failed for $user on host $i"
|
||||||
|
exit 1
|
||||||
|
fi
|
||||||
|
# remove the user subroutine on remote machine
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RSH $i /bin/rm $remoteuser.f 2> /dev/null
|
||||||
|
+ $RSH $i /bin/rm $remoteuser 2> /dev/null
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
@@ -3940,37 +3879,25 @@
|
||||||
|
if test "$userhost"
|
||||||
|
then
|
||||||
|
echo
|
||||||
|
- echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
- fi
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
+ echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
fi
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTLOWMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTLOWMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3990,6 +3917,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -4030,7 +3958,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi # if test $link
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
-
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
# done if no job id given
|
||||||
|
if test -z "$jid"
|
||||||
|
then
|
||||||
|
@@ -4149,7 +4079,7 @@
|
||||||
|
else
|
||||||
|
#dllrun >0
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes;then
|
|
@ -0,0 +1,517 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -136,6 +136,11 @@
|
||||||
|
# is created. For job running in the background, the log #
|
||||||
|
# file is always created. Default is "yes" #
|
||||||
|
##############################################################################
|
||||||
|
+# remove all Mentat paths from LD_LIBRARY_PATH
|
||||||
|
+LD_LIBRARY_PATH=:$LD_LIBRARY_PATH:
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH//+([!(:)])mentat2022.2+([!(:)])/:}
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH//+([(:)])/:}
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH#:}; LD_LIBRARY_PATH=${LD_LIBRARY_PATH%:}
|
||||||
|
# set DIR to the directory in which this script is
|
||||||
|
REALCOM="`/bin/ls -l $0 |awk '{ print $NF; }'`"
|
||||||
|
DIR=`dirname $REALCOM`
|
||||||
|
@@ -302,7 +307,23 @@
|
||||||
|
|
||||||
|
. "$DIR/getarch"
|
||||||
|
|
||||||
|
+
|
||||||
|
+# getting user subroutine file name
|
||||||
|
+found=0
|
||||||
|
+for i in "$@"; do
|
||||||
|
+ if test $found = 1; then
|
||||||
|
+ DAMASK_USER=$i
|
||||||
|
+ found=0
|
||||||
|
+ fi
|
||||||
|
+ case $i in
|
||||||
|
+ -u* | -U*)
|
||||||
|
+ found=1
|
||||||
|
+ ;;
|
||||||
|
+ esac
|
||||||
|
+done
|
||||||
|
+# sourcing include_linux64 (needs DAMASK_USER to be set)
|
||||||
|
. $MARC_INCLUDE
|
||||||
|
+
|
||||||
|
#
|
||||||
|
|
||||||
|
#
|
||||||
|
@@ -405,7 +426,7 @@
|
||||||
|
did=
|
||||||
|
vid=
|
||||||
|
user=
|
||||||
|
-usersubname=
|
||||||
|
+usernoext=
|
||||||
|
objs=
|
||||||
|
qid=background
|
||||||
|
cpu=
|
||||||
|
@@ -676,50 +697,19 @@
|
||||||
|
esac
|
||||||
|
;;
|
||||||
|
-u* | -U*)
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user
|
||||||
|
- basefile=`$BASENAME $value`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user.f
|
||||||
|
- elif test ${basefile##*.} = F
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F`
|
||||||
|
- usersubname=$user.F
|
||||||
|
- elif test ${basefile##*.} = f90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f90`
|
||||||
|
- usersubname=$user.f90
|
||||||
|
- elif test ${basefile##*.} = F90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F90`
|
||||||
|
- usersubname=$user.F90
|
||||||
|
- fi
|
||||||
|
+ user=$value
|
||||||
|
case $user in
|
||||||
|
\/*)
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
user=`pwd`/$user
|
||||||
|
- usersubname=`pwd`/$usersubname
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
- then
|
||||||
|
- if test -f $usersubname.f
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f
|
||||||
|
- elif test -f $usersubname.F
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F
|
||||||
|
- elif test -f $usersubname.f90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f90
|
||||||
|
- elif test -f $usersubname.F90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F90
|
||||||
|
- fi
|
||||||
|
- fi
|
||||||
|
+ usernoext=$user
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
;;
|
||||||
|
-obj | -OBJ)
|
||||||
|
objs="$value"
|
||||||
|
@@ -1207,12 +1197,12 @@
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
- if test "$usersubname"
|
||||||
|
+ if test "$user"
|
||||||
|
then
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
+ if test ! -f $user
|
||||||
|
then
|
||||||
|
error="$error
|
||||||
|
-user subroutine file $usersubname not accessible"
|
||||||
|
+user subroutine file $user not accessible"
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
if test "$objs"
|
||||||
|
@@ -1531,7 +1521,7 @@
|
||||||
|
Marc shared lib : $progdll
|
||||||
|
Version type : $mode
|
||||||
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
-User subroutine name : $usersubname
|
||||||
|
+User subroutine name : $user
|
||||||
|
User objects/libs : $objs
|
||||||
|
Restart file job ID : $rid
|
||||||
|
Substructure file ID : $sid
|
||||||
|
@@ -1564,7 +1554,7 @@
|
||||||
|
Marc shared lib : $progdll
|
||||||
|
Version type : $mode
|
||||||
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
-User subroutine name : $usersubname
|
||||||
|
+User subroutine name : $user
|
||||||
|
User objects/libs : $objs
|
||||||
|
Restart file job ID : $rid
|
||||||
|
Substructure file ID : $sid
|
||||||
|
@@ -1687,7 +1677,7 @@
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
fi
|
||||||
|
- $ECHO "User subroutine name ($usersubname)? $ECHOTXT"
|
||||||
|
+ $ECHO "User subroutine name ($user)? $ECHOTXT"
|
||||||
|
read value
|
||||||
|
if test "$value"
|
||||||
|
then
|
||||||
|
@@ -1696,50 +1686,19 @@
|
||||||
|
user=
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user
|
||||||
|
- basefile=`$BASENAME $value`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user.f
|
||||||
|
- elif test ${basefile##*.} = F
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F`
|
||||||
|
- usersubname=$user.F
|
||||||
|
- elif test ${basefile##*.} = f90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f90`
|
||||||
|
- usersubname=$user.f90
|
||||||
|
- elif test ${basefile##*.} = F90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F90`
|
||||||
|
- usersubname=$user.F90
|
||||||
|
- fi
|
||||||
|
+ user=$value
|
||||||
|
case $user in
|
||||||
|
\/*)
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
user=`pwd`/$user
|
||||||
|
- usersubname=`pwd`/$usersubname
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
- then
|
||||||
|
- if test -f $usersubname.f
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f
|
||||||
|
- elif test -f $usersubname.F
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F
|
||||||
|
- elif test -f $usersubname.f90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f90
|
||||||
|
- elif test -f $usersubname.F90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F90
|
||||||
|
- fi
|
||||||
|
- fi
|
||||||
|
+ usernoext=$user
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
fi
|
||||||
|
@@ -2274,11 +2233,12 @@
|
||||||
|
#
|
||||||
|
# user subroutine used
|
||||||
|
#
|
||||||
|
+# add DAMASK options for linking
|
||||||
|
+ DAMASK="-lstdc++"
|
||||||
|
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
-# program=$user.marc
|
||||||
|
- program=$DIRJOB/`$BASENAME $user .f`.marc
|
||||||
|
+ program=$usernoext.marc
|
||||||
|
case $program in
|
||||||
|
\/* | \.\/*)
|
||||||
|
bd=
|
||||||
|
@@ -2391,7 +2351,7 @@
|
||||||
|
fi
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- execpath=$DIRJOB/`$BASENAME $user .f`.marc
|
||||||
|
+ execpath=$usernoext.marc
|
||||||
|
usersub=1
|
||||||
|
fi
|
||||||
|
export execpath
|
||||||
|
@@ -3274,44 +3234,27 @@
|
||||||
|
echo
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
- fi
|
||||||
|
-
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
fi
|
||||||
|
cat > $jid.runmarcscript << END4
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- fi
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTRANMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTRANMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3331,6 +3274,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -3344,6 +3288,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
|
||||||
|
#
|
||||||
|
# run marc
|
||||||
|
@@ -3390,7 +3337,7 @@
|
||||||
|
fi
|
||||||
|
else
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes
|
||||||
|
@@ -3556,7 +3503,7 @@
|
||||||
|
# first copy over the user sub if local directories
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RCP $user.f $i:$DIR1/
|
||||||
|
+ $RCP $user $i:$DIR1/
|
||||||
|
fi
|
||||||
|
# do the compilation on the other machine
|
||||||
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
|
@@ -3569,21 +3516,21 @@
|
||||||
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
|
echo
|
||||||
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
+ $RSH $i $DIR2/tools/comp_damask_mp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
# check if successful, the new executable should be there
|
||||||
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
|
if test "$line"
|
||||||
|
then
|
||||||
|
echo compilation and linking successful on host $i
|
||||||
|
else
|
||||||
|
- echo "$0: compile failed for $user.f on host $i"
|
||||||
|
+ echo "$0: compile failed for $user on host $i"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
fi
|
||||||
|
# remove the user subroutine on remote machine
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RSH $i /bin/rm $remoteuser.f 2> /dev/null
|
||||||
|
+ $RSH $i /bin/rm $remoteuser 2> /dev/null
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
@@ -3593,39 +3540,27 @@
|
||||||
|
if test "$userhost"
|
||||||
|
then
|
||||||
|
echo
|
||||||
|
- echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
- fi
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
+ echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
fi
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTRANMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTRANMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3645,6 +3580,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -3686,6 +3622,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi # if test $link
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
|
||||||
|
#
|
||||||
|
# run marc
|
||||||
|
@@ -3779,7 +3718,7 @@
|
||||||
|
else
|
||||||
|
#dllrun >0
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes;then
|
||||||
|
@@ -3904,7 +3843,7 @@
|
||||||
|
# first copy over the user sub if local directories
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RCP $user.f $i:$DIR1/
|
||||||
|
+ $RCP $user $i:$DIR1/
|
||||||
|
fi
|
||||||
|
# do the compilation on the other machine
|
||||||
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
|
@@ -3917,20 +3856,20 @@
|
||||||
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
|
echo
|
||||||
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
+ $RSH $i $DIR2/tools/comp_damask_mp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
# check if successful, the new executable should be there
|
||||||
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
|
if test "$line"
|
||||||
|
then
|
||||||
|
echo compilation and linking successful on host $i
|
||||||
|
else
|
||||||
|
- echo "$0: compile failed for $user.f on host $i"
|
||||||
|
+ echo "$0: compile failed for $user on host $i"
|
||||||
|
exit 1
|
||||||
|
fi
|
||||||
|
# remove the user subroutine on remote machine
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RSH $i /bin/rm $remoteuser.f 2> /dev/null
|
||||||
|
+ $RSH $i /bin/rm $remoteuser 2> /dev/null
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
@@ -3940,37 +3879,25 @@
|
||||||
|
if test "$userhost"
|
||||||
|
then
|
||||||
|
echo
|
||||||
|
- echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
- fi
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
+ echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
fi
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTRANMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTRANMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3990,6 +3917,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -4030,7 +3958,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi # if test $link
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
-
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
# done if no job id given
|
||||||
|
if test -z "$jid"
|
||||||
|
then
|
||||||
|
@@ -4149,7 +4079,7 @@
|
||||||
|
else
|
||||||
|
#dllrun >0
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes;then
|
|
@ -0,0 +1,24 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -1,18 +1,5 @@
|
||||||
|
#!/bin/sh
|
||||||
|
-# This script opens a window running an editor. The default window is an
|
||||||
|
-# xterm, and the default editor is vi. These may be customized.
|
||||||
|
+# This script opens a window running an editor.
|
||||||
|
+# The command to invoke the editor is specified during DAMASK installation
|
||||||
|
|
||||||
|
-dir=
|
||||||
|
-for d in /usr/bin /usr/bin/X11; do
|
||||||
|
- if test -x "$d/xterm"; then
|
||||||
|
- dir="$d"
|
||||||
|
- break
|
||||||
|
- fi
|
||||||
|
-done
|
||||||
|
-
|
||||||
|
-if test -z "$dir"; then
|
||||||
|
- echo "$0: Could not find xterm"
|
||||||
|
- exit 1
|
||||||
|
-fi
|
||||||
|
-
|
||||||
|
-"$dir/xterm" -T "vi $*" -n "vi $*" -e vi $*
|
||||||
|
+%EDITOR% $*
|
|
@ -0,0 +1,38 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -63,10 +63,10 @@
|
||||||
|
if [ "$slv" != "" -a "$slv" != "marc" -a "$slv" != "datfit" ]; then
|
||||||
|
slv="-iam sfm"
|
||||||
|
fi
|
||||||
|
-if [ "$slv" == "marc" ]; then
|
||||||
|
+if [ "$slv" = "marc" ]; then
|
||||||
|
slv=""
|
||||||
|
fi
|
||||||
|
-if [ "$slv" == "datfit" ]; then
|
||||||
|
+if [ "$slv" = "datfit" ]; then
|
||||||
|
slv="-iam datfit"
|
||||||
|
fi
|
||||||
|
|
||||||
|
@@ -91,6 +91,7 @@
|
||||||
|
srcfile="-u $srcfile -save y"
|
||||||
|
;;
|
||||||
|
runsaved)
|
||||||
|
+ srcfile=${srcfile%.*}".marc"
|
||||||
|
srcfile="-prog $srcfile"
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
@@ -189,12 +190,12 @@
|
||||||
|
unset PYTHONPATH
|
||||||
|
|
||||||
|
if [ "$doe_first" = "-" ]; then # submit of regular Marc job
|
||||||
|
- "${DIR}/tools/run_marc" $slv -j $job -v n -b y $nprocds $nprocd \
|
||||||
|
+ "${DIR}/tools/run_damask_hmp" $slv -j $job -v n -b y $nprocds $nprocd \
|
||||||
|
$srcfile $restart $postfile $viewfactorsfile $hostfile \
|
||||||
|
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
|
||||||
|
$assem_recov_nthread $nthread $nsolver $mode $gpu > /dev/null 2>&1
|
||||||
|
else # submit of a DoE Marc job
|
||||||
|
- "${DIR}/tools/run_marc" $slv -j $job -v n -b n $nprocds $nprocd \
|
||||||
|
+ "${DIR}/tools/run_damask_hmp" $slv -j $job -v n -b n $nprocds $nprocd \
|
||||||
|
$srcfile $restart $postfile $viewfactorsfile $hostfile \
|
||||||
|
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
|
||||||
|
$assem_recov_nthread $nthread $nsolver $mode $gpu
|
|
@ -0,0 +1,38 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -63,10 +63,10 @@
|
||||||
|
if [ "$slv" != "" -a "$slv" != "marc" -a "$slv" != "datfit" ]; then
|
||||||
|
slv="-iam sfm"
|
||||||
|
fi
|
||||||
|
-if [ "$slv" == "marc" ]; then
|
||||||
|
+if [ "$slv" = "marc" ]; then
|
||||||
|
slv=""
|
||||||
|
fi
|
||||||
|
-if [ "$slv" == "datfit" ]; then
|
||||||
|
+if [ "$slv" = "datfit" ]; then
|
||||||
|
slv="-iam datfit"
|
||||||
|
fi
|
||||||
|
|
||||||
|
@@ -91,6 +91,7 @@
|
||||||
|
srcfile="-u $srcfile -save y"
|
||||||
|
;;
|
||||||
|
runsaved)
|
||||||
|
+ srcfile=${srcfile%.*}".marc"
|
||||||
|
srcfile="-prog $srcfile"
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
@@ -189,12 +190,12 @@
|
||||||
|
unset PYTHONPATH
|
||||||
|
|
||||||
|
if [ "$doe_first" = "-" ]; then # submit of regular Marc job
|
||||||
|
- "${DIR}/tools/run_marc" $slv -j $job -v n -b y $nprocds $nprocd \
|
||||||
|
+ "${DIR}/tools/run_damask_mp" $slv -j $job -v n -b y $nprocds $nprocd \
|
||||||
|
$srcfile $restart $postfile $viewfactorsfile $hostfile \
|
||||||
|
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
|
||||||
|
$assem_recov_nthread $nthread $nsolver $mode $gpu > /dev/null 2>&1
|
||||||
|
else # submit of a DoE Marc job
|
||||||
|
- "${DIR}/tools/run_marc" $slv -j $job -v n -b n $nprocds $nprocd \
|
||||||
|
+ "${DIR}/tools/run_damask_mp" $slv -j $job -v n -b n $nprocds $nprocd \
|
||||||
|
$srcfile $restart $postfile $viewfactorsfile $hostfile \
|
||||||
|
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
|
||||||
|
$assem_recov_nthread $nthread $nsolver $mode $gpu
|
|
@ -0,0 +1,38 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -63,10 +63,10 @@
|
||||||
|
if [ "$slv" != "" -a "$slv" != "marc" -a "$slv" != "datfit" ]; then
|
||||||
|
slv="-iam sfm"
|
||||||
|
fi
|
||||||
|
-if [ "$slv" == "marc" ]; then
|
||||||
|
+if [ "$slv" = "marc" ]; then
|
||||||
|
slv=""
|
||||||
|
fi
|
||||||
|
-if [ "$slv" == "datfit" ]; then
|
||||||
|
+if [ "$slv" = "datfit" ]; then
|
||||||
|
slv="-iam datfit"
|
||||||
|
fi
|
||||||
|
|
||||||
|
@@ -91,6 +91,7 @@
|
||||||
|
srcfile="-u $srcfile -save y"
|
||||||
|
;;
|
||||||
|
runsaved)
|
||||||
|
+ srcfile=${srcfile%.*}".marc"
|
||||||
|
srcfile="-prog $srcfile"
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
@@ -189,12 +190,12 @@
|
||||||
|
unset PYTHONPATH
|
||||||
|
|
||||||
|
if [ "$doe_first" = "-" ]; then # submit of regular Marc job
|
||||||
|
- "${DIR}/tools/run_marc" $slv -j $job -v n -b y $nprocds $nprocd \
|
||||||
|
+ "${DIR}/tools/run_damask_lmp" $slv -j $job -v n -b y $nprocds $nprocd \
|
||||||
|
$srcfile $restart $postfile $viewfactorsfile $hostfile \
|
||||||
|
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
|
||||||
|
$assem_recov_nthread $nthread $nsolver $mode $gpu > /dev/null 2>&1
|
||||||
|
else # submit of a DoE Marc job
|
||||||
|
- "${DIR}/tools/run_marc" $slv -j $job -v n -b n $nprocds $nprocd \
|
||||||
|
+ "${DIR}/tools/run_damask_lmp" $slv -j $job -v n -b n $nprocds $nprocd \
|
||||||
|
$srcfile $restart $postfile $viewfactorsfile $hostfile \
|
||||||
|
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
|
||||||
|
$assem_recov_nthread $nthread $nsolver $mode $gpu
|
|
@ -0,0 +1,158 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -261,11 +261,18 @@
|
||||||
|
}
|
||||||
|
button {
|
||||||
|
position +25 =
|
||||||
|
- size 25 4
|
||||||
|
+ size 18 4
|
||||||
|
text "ADVANCED JOB SUBMISSION"
|
||||||
|
help "job_run#Job Submission And Control"
|
||||||
|
popmenu job_submit_adv_pm
|
||||||
|
}
|
||||||
|
+ button {
|
||||||
|
+ position +18 =
|
||||||
|
+ size 7 4
|
||||||
|
+ text "DAMASK"
|
||||||
|
+ help "damask_run#Job Submission And Control"
|
||||||
|
+ popmenu damask
|
||||||
|
+ }
|
||||||
|
button {
|
||||||
|
position 0 +4
|
||||||
|
size 16 4
|
||||||
|
@@ -1202,6 +1209,135 @@
|
||||||
|
}
|
||||||
|
|
||||||
|
|
||||||
|
+#--------------------------------------------------------------------------------------------------
|
||||||
|
+popmenu damask {
|
||||||
|
+
|
||||||
|
+#ifdef QT_MENTAT
|
||||||
|
+ text "DAMASK.MPIE.DE"
|
||||||
|
+#endif
|
||||||
|
+
|
||||||
|
+ group {
|
||||||
|
+#ifndef QT_MENTAT
|
||||||
|
+ label {
|
||||||
|
+ position 0 0
|
||||||
|
+ size 50 4
|
||||||
|
+ text "DAMASK.MPIE.DE"
|
||||||
|
+ }
|
||||||
|
+#endif
|
||||||
|
+
|
||||||
|
+ label {
|
||||||
|
+ position 1 6
|
||||||
|
+ size 13 6
|
||||||
|
+ text "Optimzation"
|
||||||
|
+ border_width 1
|
||||||
|
+ border_color black
|
||||||
|
+ }
|
||||||
|
+
|
||||||
|
+ label {
|
||||||
|
+ position +13 =
|
||||||
|
+ size 20 6
|
||||||
|
+ text "write Input"
|
||||||
|
+ border_width 1
|
||||||
|
+ border_color black
|
||||||
|
+ }
|
||||||
|
+
|
||||||
|
+ label {
|
||||||
|
+ position +18 =
|
||||||
|
+ size 30 6
|
||||||
|
+ text "do not write Inp."
|
||||||
|
+ border_width 1
|
||||||
|
+ border_color black
|
||||||
|
+ }
|
||||||
|
+
|
||||||
|
+ label {
|
||||||
|
+ position -32 +6
|
||||||
|
+ size 12 6
|
||||||
|
+ text "O3 / OpenMP"
|
||||||
|
+ border_width 1
|
||||||
|
+ border_color black
|
||||||
|
+ }
|
||||||
|
+
|
||||||
|
+ popdown {
|
||||||
|
+ position +12 =
|
||||||
|
+ size 20 6
|
||||||
|
+ text "Submit"
|
||||||
|
+ command "*submit_job 4 *monitor_job"
|
||||||
|
+ }
|
||||||
|
+
|
||||||
|
+ popdown {
|
||||||
|
+ position +20 =
|
||||||
|
+ size 20 6
|
||||||
|
+ text "Execute"
|
||||||
|
+ command "*execute_job 4 *monitor_job"
|
||||||
|
+ }
|
||||||
|
+
|
||||||
|
+ label {
|
||||||
|
+ position -32 +6
|
||||||
|
+ size 12 6
|
||||||
|
+ text "O1 / OpenMP"
|
||||||
|
+ border_width 1
|
||||||
|
+ border_color black
|
||||||
|
+ }
|
||||||
|
+
|
||||||
|
+ popdown {
|
||||||
|
+ position +12 =
|
||||||
|
+ size 20 6
|
||||||
|
+ text "Submit"
|
||||||
|
+ command "*submit_job 5 *monitor_job"
|
||||||
|
+ }
|
||||||
|
+
|
||||||
|
+ popdown {
|
||||||
|
+ position +20 =
|
||||||
|
+ size 20 6
|
||||||
|
+ text "Execute"
|
||||||
|
+ command "*execute_job 5 *monitor_job"
|
||||||
|
+ }
|
||||||
|
+
|
||||||
|
+ label {
|
||||||
|
+ position -32 +6
|
||||||
|
+ size 12 6
|
||||||
|
+ text "O0 / OpenMP"
|
||||||
|
+ border_width 1
|
||||||
|
+ border_color black
|
||||||
|
+ }
|
||||||
|
+
|
||||||
|
+ popdown {
|
||||||
|
+ position +12 =
|
||||||
|
+ size 20 6
|
||||||
|
+ text "Submit"
|
||||||
|
+ command "*submit_job 6 *monitor_job"
|
||||||
|
+ }
|
||||||
|
+
|
||||||
|
+ popdown {
|
||||||
|
+ position +20 =
|
||||||
|
+ size 20 6
|
||||||
|
+ text "Execute"
|
||||||
|
+ command "*execute_job 6 *monitor_job"
|
||||||
|
+ }
|
||||||
|
+
|
||||||
|
+ popdown {
|
||||||
|
+ position 19 +8
|
||||||
|
+ size 12 8
|
||||||
|
+ text "CANCEL"
|
||||||
|
+ }
|
||||||
|
+}
|
||||||
|
+
|
||||||
|
+ window {
|
||||||
|
+ parent mentat
|
||||||
|
+ origin 38 8
|
||||||
|
+#ifdef DCOM
|
||||||
|
+ size 50 100
|
||||||
|
+#else
|
||||||
|
+ size 50 94
|
||||||
|
+#endif
|
||||||
|
+ background_color body
|
||||||
|
+ border_width 1
|
||||||
|
+ border_color border
|
||||||
|
+ buffering single
|
||||||
|
+ }
|
||||||
|
+ mode permanent
|
||||||
|
+}
|
||||||
|
+
|
||||||
|
#--------------------------------------------------------------------------------------------------
|
||||||
|
popmenu job_exit_msg_pm {
|
||||||
|
|
|
@ -0,0 +1,49 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -6,18 +6,27 @@
|
||||||
|
DIR=$1
|
||||||
|
user=$3
|
||||||
|
program=$4
|
||||||
|
+usernoext=$user
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
+
|
||||||
|
+# add BLAS options for linking
|
||||||
|
+ BLAS="%BLAS%"
|
||||||
|
+
|
||||||
|
. $DIR/tools/include
|
||||||
|
DIRJOB=$2
|
||||||
|
cd $DIRJOB
|
||||||
|
-echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
+echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
echo "program: $program"
|
||||||
|
- $FORTRAN $user.f || \
|
||||||
|
+ $DFORTHIGHMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
- userobj=$user.o
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
|
||||||
|
|
||||||
|
$LOAD ${program} $DIR/lib/main.o\
|
||||||
|
@@ -33,9 +42,13 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $BLAS \
|
||||||
|
$SYSLIBS || \
|
||||||
|
{
|
||||||
|
- echo "$0: link failed for $user.o on host `hostname`"
|
||||||
|
+ echo "$0: link failed for $usernoext.o on host `hostname`"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $userobj
|
||||||
|
+ /bin/rm $DIRJOB/*.mod
|
||||||
|
+ /bin/rm $DIRJOB/*.smod
|
||||||
|
+ /bin/rm $DIRJOB/*_genmod.f90
|
|
@ -0,0 +1,49 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -6,18 +6,27 @@
|
||||||
|
DIR=$1
|
||||||
|
user=$3
|
||||||
|
program=$4
|
||||||
|
+usernoext=$user
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
+
|
||||||
|
+# add BLAS options for linking
|
||||||
|
+ BLAS="%BLAS%"
|
||||||
|
+
|
||||||
|
. $DIR/tools/include
|
||||||
|
DIRJOB=$2
|
||||||
|
cd $DIRJOB
|
||||||
|
-echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
+echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
echo "program: $program"
|
||||||
|
- $FORTRAN $user.f || \
|
||||||
|
+ $DFORTRANLOWMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
- userobj=$user.o
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
|
||||||
|
|
||||||
|
$LOAD ${program} $DIR/lib/main.o\
|
||||||
|
@@ -33,9 +42,13 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $BLAS \
|
||||||
|
$SYSLIBS || \
|
||||||
|
{
|
||||||
|
- echo "$0: link failed for $user.o on host `hostname`"
|
||||||
|
+ echo "$0: link failed for $usernoext.o on host `hostname`"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $userobj
|
||||||
|
+ /bin/rm $DIRJOB/*.mod
|
||||||
|
+ /bin/rm $DIRJOB/*.smod
|
||||||
|
+ /bin/rm $DIRJOB/*_genmod.f90
|
|
@ -0,0 +1,49 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -6,18 +6,27 @@
|
||||||
|
DIR=$1
|
||||||
|
user=$3
|
||||||
|
program=$4
|
||||||
|
+usernoext=$user
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
+
|
||||||
|
+# add BLAS options for linking
|
||||||
|
+ BLAS="%BLAS%"
|
||||||
|
+
|
||||||
|
. $DIR/tools/include
|
||||||
|
DIRJOB=$2
|
||||||
|
cd $DIRJOB
|
||||||
|
-echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
+echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
echo "program: $program"
|
||||||
|
- $FORTRAN $user.f || \
|
||||||
|
+ $DFORTRANMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
- userobj=$user.o
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
|
||||||
|
|
||||||
|
$LOAD ${program} $DIR/lib/main.o\
|
||||||
|
@@ -33,9 +42,13 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $BLAS \
|
||||||
|
$SYSLIBS || \
|
||||||
|
{
|
||||||
|
- echo "$0: link failed for $user.o on host `hostname`"
|
||||||
|
+ echo "$0: link failed for $usernoext.o on host `hostname`"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $userobj
|
||||||
|
+ /bin/rm $DIRJOB/*.mod
|
||||||
|
+ /bin/rm $DIRJOB/*.smod
|
||||||
|
+ /bin/rm $DIRJOB/*_genmod.f90
|
|
@ -0,0 +1,75 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -166,6 +166,15 @@
|
||||||
|
MARC_COSIM_LIB="$MSCCOSIM_HOME/CoSim$MSCCOSIM_VERSION/Dcosim$MSCCOSIM_VERSION/lib"
|
||||||
|
fi
|
||||||
|
|
||||||
|
+# DAMASK uses the HDF5 compiler wrapper around the Intel compiler
|
||||||
|
+H5FC=$(h5fc -shlib -show)
|
||||||
|
+if [[ "$H5FC" == *"$dir is"* ]]; then
|
||||||
|
+ H5FC=$(echo $(echo "$H5FC" | tail -n1) | sed -e "s/\-shlib/-fPIC -qopenmp/g")
|
||||||
|
+ H5FC=${H5FC%-lmpifort*}
|
||||||
|
+fi
|
||||||
|
+HDF5_LIB=${H5FC//*ifort/}
|
||||||
|
+FCOMP="$H5FC"
|
||||||
|
+
|
||||||
|
# AEM
|
||||||
|
if test "$MARCDLLOUTDIR" = ""; then
|
||||||
|
DLLOUTDIR="$MARC_LIB"
|
||||||
|
@@ -594,7 +603,7 @@
|
||||||
|
PROFILE=" $PROFILE -pg"
|
||||||
|
fi
|
||||||
|
|
||||||
|
-FORT_OPT="-c -assume byterecl -safe_cray_ptr -mp1 -WB -fp-model source"
|
||||||
|
+FORT_OPT="-c -implicitnone -stand f18 -standard-semantics -assume nostd_mod_proc_name -safe_cray_ptr -mp1 -WB -fp-model source"
|
||||||
|
if test "$MTHREAD" = "OPENMP"
|
||||||
|
then
|
||||||
|
FORT_OPT=" $FORT_OPT -qopenmp"
|
||||||
|
@@ -607,7 +616,7 @@
|
||||||
|
FORT_OPT=" $FORT_OPT -save -zero"
|
||||||
|
fi
|
||||||
|
if test "$MARCHDF_HDF" = "HDF"; then
|
||||||
|
- FORT_OPT="$FORT_OPT -DMARCHDF_HDF=$MARCHDF_HDF $HDF_INCLUDE"
|
||||||
|
+ FORT_OPT="$FORT_OPT -DMARCHDF=$MARCHDF_HDF"
|
||||||
|
fi
|
||||||
|
|
||||||
|
FORTLOW="$FCOMP $FORT_OPT $PROFILE -O0 $I8FFLAGS -I$MARC_SOURCE/common \
|
||||||
|
@@ -621,6 +630,29 @@
|
||||||
|
# for compiling free form f90 files. high opt, integer(4)
|
||||||
|
FORTF90="$FCOMP -c -O3"
|
||||||
|
|
||||||
|
+# determine DAMASK version
|
||||||
|
+if test -n "$DAMASK_USER"; then
|
||||||
|
+ DAMASKROOT=`dirname $DAMASK_USER`/../..
|
||||||
|
+ read DAMASKVERSION < $DAMASKROOT/VERSION
|
||||||
|
+ DAMASKVERSION="'"$DAMASKVERSION"'"
|
||||||
|
+else
|
||||||
|
+ DAMASKVERSION="'N/A'"
|
||||||
|
+fi
|
||||||
|
+
|
||||||
|
+# DAMASK compiler calls
|
||||||
|
+DFORTLOWMP="$FCOMP -c -O0 -qno-offload -implicitnone -stand f18 -standard-semantics -assume nostd_mod_proc_name -safe_cray_ptr $PROFILE -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
|
||||||
|
+ -fpp -ftz -diag-disable 5268 -warn declarations -warn general -warn usage -warn interfaces -warn ignore_loc -warn alignments -DMARC4DAMASK=2022.3 -DDAMASKVERSION=$DAMASKVERSION \
|
||||||
|
+ -qopenmp -qopenmp-threadprivate=compat\
|
||||||
|
+ $MUMPS_INCLUDE $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS -I$KDTREE2_MOD -I$MARC_MOD"
|
||||||
|
+DFORTRANMP="$FCOMP -c -O1 -qno-offload -implicitnone -stand f18 -standard-semantics -assume nostd_mod_proc_name -safe_cray_ptr $PROFILE -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
|
||||||
|
+ -fpp -ftz -diag-disable 5268 -warn declarations -warn general -warn usage -warn interfaces -warn ignore_loc -warn alignments -DMARC4DAMASK=2022.3 -DDAMASKVERSION=$DAMASKVERSION \
|
||||||
|
+ -qopenmp -qopenmp-threadprivate=compat\
|
||||||
|
+ $MUMPS_INCLUDE $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS -I$KDTREE2_MOD -I$MARC_MOD"
|
||||||
|
+DFORTHIGHMP="$FCOMP -c -O3 -qno-offload -implicitnone -stand f18 -standard-semantics -assume nostd_mod_proc_name -safe_cray_ptr $PROFILE -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
|
||||||
|
+ -fpp -ftz -diag-disable 5268 -warn declarations -warn general -warn usage -warn interfaces -warn ignore_loc -warn alignments -DMARC4DAMASK=2022.3 -DDAMASKVERSION=$DAMASKVERSION \
|
||||||
|
+ -qopenmp -qopenmp-threadprivate=compat\
|
||||||
|
+ $MUMPS_INCLUDE $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS -I$KDTREE2_MOD -I$MARC_MOD"
|
||||||
|
+
|
||||||
|
if test "$MARCDEBUG" = "ON"
|
||||||
|
then
|
||||||
|
FORTLOW="$FCOMP $FORT_OPT $PROFILE $I8FFLAGS -I$MARC_SOURCE/common \
|
||||||
|
@@ -778,7 +810,7 @@
|
||||||
|
|
||||||
|
SOLVERLIBS="${BCSSOLVERLIBS} ${VKISOLVERLIBS} ${CASISOLVERLIBS} ${MF2SOLVERLIBS} \
|
||||||
|
-L$MARC_MKL \
|
||||||
|
- $MARC_LIB/blas_src.a ${ACSI_LIB}/ACSI_MarcLib.a $KDTREE2_LIB/libkdtree2.a $MARC_LIB/libtetmeshinterface.a $MARC_LIB/libcaefatigueinterface.a -L$MARC_LIB -lmkl_blacs_intelmpi_ilp64 -lmkl_scalapack_ilp64 -lmkl_intel_ilp64 -lmkl_intel_thread -lmkl_core -liomp5 -ltetmesh -lmeshgems -lmg-tetra -lmeshgems_stubs $HDF_LIBS $SOLVER2LIBS"
|
||||||
|
+ $MARC_LIB/blas_src.a ${ACSI_LIB}/ACSI_MarcLib.a $KDTREE2_LIB/libkdtree2.a $MARC_LIB/libtetmeshinterface.a $MARC_LIB/libcaefatigueinterface.a -L$MARC_LIB -lmkl_blacs_intelmpi_ilp64 -lmkl_scalapack_ilp64 -lmkl_intel_ilp64 -lmkl_intel_thread -lmkl_core -liomp5 -ltetmesh -lmeshgems -lmg-tetra -lmeshgems_stubs $HDF5_LIB $SOLVER2LIBS"
|
||||||
|
|
||||||
|
SOLVERLIBS_DLL=${SOLVERLIBS}
|
||||||
|
if test "$AEM_DLL" -eq 1
|
|
@ -0,0 +1,517 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -136,6 +136,11 @@
|
||||||
|
# is created. For job running in the background, the log #
|
||||||
|
# file is always created. Default is "yes" #
|
||||||
|
##############################################################################
|
||||||
|
+# remove all Mentat paths from LD_LIBRARY_PATH
|
||||||
|
+LD_LIBRARY_PATH=:$LD_LIBRARY_PATH:
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH//+([!(:)])mentat2022.3+([!(:)])/:}
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH//+([(:)])/:}
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH#:}; LD_LIBRARY_PATH=${LD_LIBRARY_PATH%:}
|
||||||
|
# set DIR to the directory in which this script is
|
||||||
|
REALCOM="`/bin/ls -l $0 |awk '{ print $NF; }'`"
|
||||||
|
DIR=`dirname $REALCOM`
|
||||||
|
@@ -302,7 +307,23 @@
|
||||||
|
|
||||||
|
. "$DIR/getarch"
|
||||||
|
|
||||||
|
+
|
||||||
|
+# getting user subroutine file name
|
||||||
|
+found=0
|
||||||
|
+for i in "$@"; do
|
||||||
|
+ if test $found = 1; then
|
||||||
|
+ DAMASK_USER=$i
|
||||||
|
+ found=0
|
||||||
|
+ fi
|
||||||
|
+ case $i in
|
||||||
|
+ -u* | -U*)
|
||||||
|
+ found=1
|
||||||
|
+ ;;
|
||||||
|
+ esac
|
||||||
|
+done
|
||||||
|
+# sourcing include_linux64 (needs DAMASK_USER to be set)
|
||||||
|
. $MARC_INCLUDE
|
||||||
|
+
|
||||||
|
#
|
||||||
|
|
||||||
|
#
|
||||||
|
@@ -405,7 +426,7 @@
|
||||||
|
did=
|
||||||
|
vid=
|
||||||
|
user=
|
||||||
|
-usersubname=
|
||||||
|
+usernoext=
|
||||||
|
objs=
|
||||||
|
qid=background
|
||||||
|
cpu=
|
||||||
|
@@ -676,50 +697,19 @@
|
||||||
|
esac
|
||||||
|
;;
|
||||||
|
-u* | -U*)
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user
|
||||||
|
- basefile=`$BASENAME $value`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user.f
|
||||||
|
- elif test ${basefile##*.} = F
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F`
|
||||||
|
- usersubname=$user.F
|
||||||
|
- elif test ${basefile##*.} = f90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f90`
|
||||||
|
- usersubname=$user.f90
|
||||||
|
- elif test ${basefile##*.} = F90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F90`
|
||||||
|
- usersubname=$user.F90
|
||||||
|
- fi
|
||||||
|
+ user=$value
|
||||||
|
case $user in
|
||||||
|
\/*)
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
user=`pwd`/$user
|
||||||
|
- usersubname=`pwd`/$usersubname
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
- then
|
||||||
|
- if test -f $usersubname.f
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f
|
||||||
|
- elif test -f $usersubname.F
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F
|
||||||
|
- elif test -f $usersubname.f90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f90
|
||||||
|
- elif test -f $usersubname.F90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F90
|
||||||
|
- fi
|
||||||
|
- fi
|
||||||
|
+ usernoext=$user
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
;;
|
||||||
|
-obj | -OBJ)
|
||||||
|
objs="$value"
|
||||||
|
@@ -1207,12 +1197,12 @@
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
- if test "$usersubname"
|
||||||
|
+ if test "$user"
|
||||||
|
then
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
+ if test ! -f $user
|
||||||
|
then
|
||||||
|
error="$error
|
||||||
|
-user subroutine file $usersubname not accessible"
|
||||||
|
+user subroutine file $user not accessible"
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
if test "$objs"
|
||||||
|
@@ -1531,7 +1521,7 @@
|
||||||
|
Marc shared lib : $progdll
|
||||||
|
Version type : $mode
|
||||||
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
-User subroutine name : $usersubname
|
||||||
|
+User subroutine name : $user
|
||||||
|
User objects/libs : $objs
|
||||||
|
Restart file job ID : $rid
|
||||||
|
Substructure file ID : $sid
|
||||||
|
@@ -1564,7 +1554,7 @@
|
||||||
|
Marc shared lib : $progdll
|
||||||
|
Version type : $mode
|
||||||
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
-User subroutine name : $usersubname
|
||||||
|
+User subroutine name : $user
|
||||||
|
User objects/libs : $objs
|
||||||
|
Restart file job ID : $rid
|
||||||
|
Substructure file ID : $sid
|
||||||
|
@@ -1687,7 +1677,7 @@
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
fi
|
||||||
|
- $ECHO "User subroutine name ($usersubname)? $ECHOTXT"
|
||||||
|
+ $ECHO "User subroutine name ($user)? $ECHOTXT"
|
||||||
|
read value
|
||||||
|
if test "$value"
|
||||||
|
then
|
||||||
|
@@ -1696,50 +1686,19 @@
|
||||||
|
user=
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user
|
||||||
|
- basefile=`$BASENAME $value`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user.f
|
||||||
|
- elif test ${basefile##*.} = F
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F`
|
||||||
|
- usersubname=$user.F
|
||||||
|
- elif test ${basefile##*.} = f90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f90`
|
||||||
|
- usersubname=$user.f90
|
||||||
|
- elif test ${basefile##*.} = F90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F90`
|
||||||
|
- usersubname=$user.F90
|
||||||
|
- fi
|
||||||
|
+ user=$value
|
||||||
|
case $user in
|
||||||
|
\/*)
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
user=`pwd`/$user
|
||||||
|
- usersubname=`pwd`/$usersubname
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
- then
|
||||||
|
- if test -f $usersubname.f
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f
|
||||||
|
- elif test -f $usersubname.F
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F
|
||||||
|
- elif test -f $usersubname.f90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f90
|
||||||
|
- elif test -f $usersubname.F90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F90
|
||||||
|
- fi
|
||||||
|
- fi
|
||||||
|
+ usernoext=$user
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
fi
|
||||||
|
@@ -2274,11 +2233,12 @@
|
||||||
|
#
|
||||||
|
# user subroutine used
|
||||||
|
#
|
||||||
|
+# add DAMASK options for linking
|
||||||
|
+ DAMASK="-lstdc++"
|
||||||
|
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
-# program=$user.marc
|
||||||
|
- program=$DIRJOB/`$BASENAME $user .f`.marc
|
||||||
|
+ program=$usernoext.marc
|
||||||
|
case $program in
|
||||||
|
\/* | \.\/*)
|
||||||
|
bd=
|
||||||
|
@@ -2391,7 +2351,7 @@
|
||||||
|
fi
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- execpath=$DIRJOB/`$BASENAME $user .f`.marc
|
||||||
|
+ execpath=$usernoext.marc
|
||||||
|
usersub=1
|
||||||
|
fi
|
||||||
|
export execpath
|
||||||
|
@@ -3274,44 +3234,27 @@
|
||||||
|
echo
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
- fi
|
||||||
|
-
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
fi
|
||||||
|
cat > $jid.runmarcscript << END4
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- fi
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTHIGHMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTHIGHMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3331,6 +3274,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -3344,6 +3288,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
|
||||||
|
#
|
||||||
|
# run marc
|
||||||
|
@@ -3390,7 +3337,7 @@
|
||||||
|
fi
|
||||||
|
else
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes
|
||||||
|
@@ -3556,7 +3503,7 @@
|
||||||
|
# first copy over the user sub if local directories
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RCP $user.f $i:$DIR1/
|
||||||
|
+ $RCP $user $i:$DIR1/
|
||||||
|
fi
|
||||||
|
# do the compilation on the other machine
|
||||||
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
|
@@ -3569,21 +3516,21 @@
|
||||||
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
|
echo
|
||||||
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
+ $RSH $i $DIR2/tools/comp_damask_hmp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
# check if successful, the new executable should be there
|
||||||
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
|
if test "$line"
|
||||||
|
then
|
||||||
|
echo compilation and linking successful on host $i
|
||||||
|
else
|
||||||
|
- echo "$0: compile failed for $user.f on host $i"
|
||||||
|
+ echo "$0: compile failed for $user on host $i"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
fi
|
||||||
|
# remove the user subroutine on remote machine
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RSH $i /bin/rm $remoteuser.f 2> /dev/null
|
||||||
|
+ $RSH $i /bin/rm $remoteuser 2> /dev/null
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
@@ -3593,39 +3540,27 @@
|
||||||
|
if test "$userhost"
|
||||||
|
then
|
||||||
|
echo
|
||||||
|
- echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
- fi
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
+ echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
fi
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTHIGHMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTHIGHMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3645,6 +3580,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -3686,6 +3622,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi # if test $link
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
|
||||||
|
#
|
||||||
|
# run marc
|
||||||
|
@@ -3779,7 +3718,7 @@
|
||||||
|
else
|
||||||
|
#dllrun >0
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes;then
|
||||||
|
@@ -3904,7 +3843,7 @@
|
||||||
|
# first copy over the user sub if local directories
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RCP $user.f $i:$DIR1/
|
||||||
|
+ $RCP $user $i:$DIR1/
|
||||||
|
fi
|
||||||
|
# do the compilation on the other machine
|
||||||
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
|
@@ -3917,20 +3856,20 @@
|
||||||
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
|
echo
|
||||||
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
+ $RSH $i $DIR2/tools/comp_damask_hmp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
# check if successful, the new executable should be there
|
||||||
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
|
if test "$line"
|
||||||
|
then
|
||||||
|
echo compilation and linking successful on host $i
|
||||||
|
else
|
||||||
|
- echo "$0: compile failed for $user.f on host $i"
|
||||||
|
+ echo "$0: compile failed for $user on host $i"
|
||||||
|
exit 1
|
||||||
|
fi
|
||||||
|
# remove the user subroutine on remote machine
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RSH $i /bin/rm $remoteuser.f 2> /dev/null
|
||||||
|
+ $RSH $i /bin/rm $remoteuser 2> /dev/null
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
@@ -3940,37 +3879,25 @@
|
||||||
|
if test "$userhost"
|
||||||
|
then
|
||||||
|
echo
|
||||||
|
- echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
- fi
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
+ echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
fi
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTHIGHMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTHIGHMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3990,6 +3917,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -4030,7 +3958,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi # if test $link
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
-
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
# done if no job id given
|
||||||
|
if test -z "$jid"
|
||||||
|
then
|
||||||
|
@@ -4149,7 +4079,7 @@
|
||||||
|
else
|
||||||
|
#dllrun >0
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes;then
|
|
@ -0,0 +1,517 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -136,6 +136,11 @@
|
||||||
|
# is created. For job running in the background, the log #
|
||||||
|
# file is always created. Default is "yes" #
|
||||||
|
##############################################################################
|
||||||
|
+# remove all Mentat paths from LD_LIBRARY_PATH
|
||||||
|
+LD_LIBRARY_PATH=:$LD_LIBRARY_PATH:
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH//+([!(:)])mentat2022.3+([!(:)])/:}
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH//+([(:)])/:}
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH#:}; LD_LIBRARY_PATH=${LD_LIBRARY_PATH%:}
|
||||||
|
# set DIR to the directory in which this script is
|
||||||
|
REALCOM="`/bin/ls -l $0 |awk '{ print $NF; }'`"
|
||||||
|
DIR=`dirname $REALCOM`
|
||||||
|
@@ -302,7 +307,23 @@
|
||||||
|
|
||||||
|
. "$DIR/getarch"
|
||||||
|
|
||||||
|
+
|
||||||
|
+# getting user subroutine file name
|
||||||
|
+found=0
|
||||||
|
+for i in "$@"; do
|
||||||
|
+ if test $found = 1; then
|
||||||
|
+ DAMASK_USER=$i
|
||||||
|
+ found=0
|
||||||
|
+ fi
|
||||||
|
+ case $i in
|
||||||
|
+ -u* | -U*)
|
||||||
|
+ found=1
|
||||||
|
+ ;;
|
||||||
|
+ esac
|
||||||
|
+done
|
||||||
|
+# sourcing include_linux64 (needs DAMASK_USER to be set)
|
||||||
|
. $MARC_INCLUDE
|
||||||
|
+
|
||||||
|
#
|
||||||
|
|
||||||
|
#
|
||||||
|
@@ -405,7 +426,7 @@
|
||||||
|
did=
|
||||||
|
vid=
|
||||||
|
user=
|
||||||
|
-usersubname=
|
||||||
|
+usernoext=
|
||||||
|
objs=
|
||||||
|
qid=background
|
||||||
|
cpu=
|
||||||
|
@@ -676,50 +697,19 @@
|
||||||
|
esac
|
||||||
|
;;
|
||||||
|
-u* | -U*)
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user
|
||||||
|
- basefile=`$BASENAME $value`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user.f
|
||||||
|
- elif test ${basefile##*.} = F
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F`
|
||||||
|
- usersubname=$user.F
|
||||||
|
- elif test ${basefile##*.} = f90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f90`
|
||||||
|
- usersubname=$user.f90
|
||||||
|
- elif test ${basefile##*.} = F90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F90`
|
||||||
|
- usersubname=$user.F90
|
||||||
|
- fi
|
||||||
|
+ user=$value
|
||||||
|
case $user in
|
||||||
|
\/*)
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
user=`pwd`/$user
|
||||||
|
- usersubname=`pwd`/$usersubname
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
- then
|
||||||
|
- if test -f $usersubname.f
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f
|
||||||
|
- elif test -f $usersubname.F
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F
|
||||||
|
- elif test -f $usersubname.f90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f90
|
||||||
|
- elif test -f $usersubname.F90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F90
|
||||||
|
- fi
|
||||||
|
- fi
|
||||||
|
+ usernoext=$user
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
;;
|
||||||
|
-obj | -OBJ)
|
||||||
|
objs="$value"
|
||||||
|
@@ -1207,12 +1197,12 @@
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
- if test "$usersubname"
|
||||||
|
+ if test "$user"
|
||||||
|
then
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
+ if test ! -f $user
|
||||||
|
then
|
||||||
|
error="$error
|
||||||
|
-user subroutine file $usersubname not accessible"
|
||||||
|
+user subroutine file $user not accessible"
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
if test "$objs"
|
||||||
|
@@ -1531,7 +1521,7 @@
|
||||||
|
Marc shared lib : $progdll
|
||||||
|
Version type : $mode
|
||||||
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
-User subroutine name : $usersubname
|
||||||
|
+User subroutine name : $user
|
||||||
|
User objects/libs : $objs
|
||||||
|
Restart file job ID : $rid
|
||||||
|
Substructure file ID : $sid
|
||||||
|
@@ -1564,7 +1554,7 @@
|
||||||
|
Marc shared lib : $progdll
|
||||||
|
Version type : $mode
|
||||||
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
-User subroutine name : $usersubname
|
||||||
|
+User subroutine name : $user
|
||||||
|
User objects/libs : $objs
|
||||||
|
Restart file job ID : $rid
|
||||||
|
Substructure file ID : $sid
|
||||||
|
@@ -1687,7 +1677,7 @@
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
fi
|
||||||
|
- $ECHO "User subroutine name ($usersubname)? $ECHOTXT"
|
||||||
|
+ $ECHO "User subroutine name ($user)? $ECHOTXT"
|
||||||
|
read value
|
||||||
|
if test "$value"
|
||||||
|
then
|
||||||
|
@@ -1696,50 +1686,19 @@
|
||||||
|
user=
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user
|
||||||
|
- basefile=`$BASENAME $value`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user.f
|
||||||
|
- elif test ${basefile##*.} = F
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F`
|
||||||
|
- usersubname=$user.F
|
||||||
|
- elif test ${basefile##*.} = f90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f90`
|
||||||
|
- usersubname=$user.f90
|
||||||
|
- elif test ${basefile##*.} = F90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F90`
|
||||||
|
- usersubname=$user.F90
|
||||||
|
- fi
|
||||||
|
+ user=$value
|
||||||
|
case $user in
|
||||||
|
\/*)
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
user=`pwd`/$user
|
||||||
|
- usersubname=`pwd`/$usersubname
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
- then
|
||||||
|
- if test -f $usersubname.f
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f
|
||||||
|
- elif test -f $usersubname.F
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F
|
||||||
|
- elif test -f $usersubname.f90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f90
|
||||||
|
- elif test -f $usersubname.F90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F90
|
||||||
|
- fi
|
||||||
|
- fi
|
||||||
|
+ usernoext=$user
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
fi
|
||||||
|
@@ -2274,11 +2233,12 @@
|
||||||
|
#
|
||||||
|
# user subroutine used
|
||||||
|
#
|
||||||
|
+# add DAMASK options for linking
|
||||||
|
+ DAMASK="-lstdc++"
|
||||||
|
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
-# program=$user.marc
|
||||||
|
- program=$DIRJOB/`$BASENAME $user .f`.marc
|
||||||
|
+ program=$usernoext.marc
|
||||||
|
case $program in
|
||||||
|
\/* | \.\/*)
|
||||||
|
bd=
|
||||||
|
@@ -2391,7 +2351,7 @@
|
||||||
|
fi
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- execpath=$DIRJOB/`$BASENAME $user .f`.marc
|
||||||
|
+ execpath=$usernoext.marc
|
||||||
|
usersub=1
|
||||||
|
fi
|
||||||
|
export execpath
|
||||||
|
@@ -3274,44 +3234,27 @@
|
||||||
|
echo
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
- fi
|
||||||
|
-
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
fi
|
||||||
|
cat > $jid.runmarcscript << END4
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- fi
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTLOWMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTLOWMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3331,6 +3274,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -3344,6 +3288,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
|
||||||
|
#
|
||||||
|
# run marc
|
||||||
|
@@ -3390,7 +3337,7 @@
|
||||||
|
fi
|
||||||
|
else
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes
|
||||||
|
@@ -3556,7 +3503,7 @@
|
||||||
|
# first copy over the user sub if local directories
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RCP $user.f $i:$DIR1/
|
||||||
|
+ $RCP $user $i:$DIR1/
|
||||||
|
fi
|
||||||
|
# do the compilation on the other machine
|
||||||
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
|
@@ -3569,21 +3516,21 @@
|
||||||
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
|
echo
|
||||||
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
+ $RSH $i $DIR2/tools/comp_damask_lmp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
# check if successful, the new executable should be there
|
||||||
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
|
if test "$line"
|
||||||
|
then
|
||||||
|
echo compilation and linking successful on host $i
|
||||||
|
else
|
||||||
|
- echo "$0: compile failed for $user.f on host $i"
|
||||||
|
+ echo "$0: compile failed for $user on host $i"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
fi
|
||||||
|
# remove the user subroutine on remote machine
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RSH $i /bin/rm $remoteuser.f 2> /dev/null
|
||||||
|
+ $RSH $i /bin/rm $remoteuser 2> /dev/null
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
@@ -3593,39 +3540,27 @@
|
||||||
|
if test "$userhost"
|
||||||
|
then
|
||||||
|
echo
|
||||||
|
- echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
- fi
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
+ echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
fi
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTLOWMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTLOWMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3645,6 +3580,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -3686,6 +3622,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi # if test $link
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
|
||||||
|
#
|
||||||
|
# run marc
|
||||||
|
@@ -3779,7 +3718,7 @@
|
||||||
|
else
|
||||||
|
#dllrun >0
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes;then
|
||||||
|
@@ -3904,7 +3843,7 @@
|
||||||
|
# first copy over the user sub if local directories
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RCP $user.f $i:$DIR1/
|
||||||
|
+ $RCP $user $i:$DIR1/
|
||||||
|
fi
|
||||||
|
# do the compilation on the other machine
|
||||||
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
|
@@ -3917,20 +3856,20 @@
|
||||||
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
|
echo
|
||||||
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
+ $RSH $i $DIR2/tools/comp_damask_lmp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
# check if successful, the new executable should be there
|
||||||
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
|
if test "$line"
|
||||||
|
then
|
||||||
|
echo compilation and linking successful on host $i
|
||||||
|
else
|
||||||
|
- echo "$0: compile failed for $user.f on host $i"
|
||||||
|
+ echo "$0: compile failed for $user on host $i"
|
||||||
|
exit 1
|
||||||
|
fi
|
||||||
|
# remove the user subroutine on remote machine
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RSH $i /bin/rm $remoteuser.f 2> /dev/null
|
||||||
|
+ $RSH $i /bin/rm $remoteuser 2> /dev/null
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
@@ -3940,37 +3879,25 @@
|
||||||
|
if test "$userhost"
|
||||||
|
then
|
||||||
|
echo
|
||||||
|
- echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
- fi
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
+ echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
fi
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTLOWMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTLOWMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3990,6 +3917,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -4030,7 +3958,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi # if test $link
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
-
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
# done if no job id given
|
||||||
|
if test -z "$jid"
|
||||||
|
then
|
||||||
|
@@ -4149,7 +4079,7 @@
|
||||||
|
else
|
||||||
|
#dllrun >0
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes;then
|
|
@ -0,0 +1,517 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -136,6 +136,11 @@
|
||||||
|
# is created. For job running in the background, the log #
|
||||||
|
# file is always created. Default is "yes" #
|
||||||
|
##############################################################################
|
||||||
|
+# remove all Mentat paths from LD_LIBRARY_PATH
|
||||||
|
+LD_LIBRARY_PATH=:$LD_LIBRARY_PATH:
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH//+([!(:)])mentat2022.3+([!(:)])/:}
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH//+([(:)])/:}
|
||||||
|
+LD_LIBRARY_PATH=${LD_LIBRARY_PATH#:}; LD_LIBRARY_PATH=${LD_LIBRARY_PATH%:}
|
||||||
|
# set DIR to the directory in which this script is
|
||||||
|
REALCOM="`/bin/ls -l $0 |awk '{ print $NF; }'`"
|
||||||
|
DIR=`dirname $REALCOM`
|
||||||
|
@@ -302,7 +307,23 @@
|
||||||
|
|
||||||
|
. "$DIR/getarch"
|
||||||
|
|
||||||
|
+
|
||||||
|
+# getting user subroutine file name
|
||||||
|
+found=0
|
||||||
|
+for i in "$@"; do
|
||||||
|
+ if test $found = 1; then
|
||||||
|
+ DAMASK_USER=$i
|
||||||
|
+ found=0
|
||||||
|
+ fi
|
||||||
|
+ case $i in
|
||||||
|
+ -u* | -U*)
|
||||||
|
+ found=1
|
||||||
|
+ ;;
|
||||||
|
+ esac
|
||||||
|
+done
|
||||||
|
+# sourcing include_linux64 (needs DAMASK_USER to be set)
|
||||||
|
. $MARC_INCLUDE
|
||||||
|
+
|
||||||
|
#
|
||||||
|
|
||||||
|
#
|
||||||
|
@@ -405,7 +426,7 @@
|
||||||
|
did=
|
||||||
|
vid=
|
||||||
|
user=
|
||||||
|
-usersubname=
|
||||||
|
+usernoext=
|
||||||
|
objs=
|
||||||
|
qid=background
|
||||||
|
cpu=
|
||||||
|
@@ -676,50 +697,19 @@
|
||||||
|
esac
|
||||||
|
;;
|
||||||
|
-u* | -U*)
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user
|
||||||
|
- basefile=`$BASENAME $value`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user.f
|
||||||
|
- elif test ${basefile##*.} = F
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F`
|
||||||
|
- usersubname=$user.F
|
||||||
|
- elif test ${basefile##*.} = f90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f90`
|
||||||
|
- usersubname=$user.f90
|
||||||
|
- elif test ${basefile##*.} = F90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F90`
|
||||||
|
- usersubname=$user.F90
|
||||||
|
- fi
|
||||||
|
+ user=$value
|
||||||
|
case $user in
|
||||||
|
\/*)
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
user=`pwd`/$user
|
||||||
|
- usersubname=`pwd`/$usersubname
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
- then
|
||||||
|
- if test -f $usersubname.f
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f
|
||||||
|
- elif test -f $usersubname.F
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F
|
||||||
|
- elif test -f $usersubname.f90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f90
|
||||||
|
- elif test -f $usersubname.F90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F90
|
||||||
|
- fi
|
||||||
|
- fi
|
||||||
|
+ usernoext=$user
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
;;
|
||||||
|
-obj | -OBJ)
|
||||||
|
objs="$value"
|
||||||
|
@@ -1207,12 +1197,12 @@
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
- if test "$usersubname"
|
||||||
|
+ if test "$user"
|
||||||
|
then
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
+ if test ! -f $user
|
||||||
|
then
|
||||||
|
error="$error
|
||||||
|
-user subroutine file $usersubname not accessible"
|
||||||
|
+user subroutine file $user not accessible"
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
if test "$objs"
|
||||||
|
@@ -1531,7 +1521,7 @@
|
||||||
|
Marc shared lib : $progdll
|
||||||
|
Version type : $mode
|
||||||
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
-User subroutine name : $usersubname
|
||||||
|
+User subroutine name : $user
|
||||||
|
User objects/libs : $objs
|
||||||
|
Restart file job ID : $rid
|
||||||
|
Substructure file ID : $sid
|
||||||
|
@@ -1564,7 +1554,7 @@
|
||||||
|
Marc shared lib : $progdll
|
||||||
|
Version type : $mode
|
||||||
|
Job ID : $DIRJID/$jid$extra_job_info
|
||||||
|
-User subroutine name : $usersubname
|
||||||
|
+User subroutine name : $user
|
||||||
|
User objects/libs : $objs
|
||||||
|
Restart file job ID : $rid
|
||||||
|
Substructure file ID : $sid
|
||||||
|
@@ -1687,7 +1677,7 @@
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
fi
|
||||||
|
- $ECHO "User subroutine name ($usersubname)? $ECHOTXT"
|
||||||
|
+ $ECHO "User subroutine name ($user)? $ECHOTXT"
|
||||||
|
read value
|
||||||
|
if test "$value"
|
||||||
|
then
|
||||||
|
@@ -1696,50 +1686,19 @@
|
||||||
|
user=
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user
|
||||||
|
- basefile=`$BASENAME $value`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f`
|
||||||
|
- usersubname=$user.f
|
||||||
|
- elif test ${basefile##*.} = F
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F`
|
||||||
|
- usersubname=$user.F
|
||||||
|
- elif test ${basefile##*.} = f90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .f90`
|
||||||
|
- usersubname=$user.f90
|
||||||
|
- elif test ${basefile##*.} = F90
|
||||||
|
- then
|
||||||
|
- user=`dirname $value`/`$BASENAME $value .F90`
|
||||||
|
- usersubname=$user.F90
|
||||||
|
- fi
|
||||||
|
+ user=$value
|
||||||
|
case $user in
|
||||||
|
\/*)
|
||||||
|
;;
|
||||||
|
*)
|
||||||
|
user=`pwd`/$user
|
||||||
|
- usersubname=`pwd`/$usersubname
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
- if test ! -f $usersubname
|
||||||
|
- then
|
||||||
|
- if test -f $usersubname.f
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f
|
||||||
|
- elif test -f $usersubname.F
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F
|
||||||
|
- elif test -f $usersubname.f90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.f90
|
||||||
|
- elif test -f $usersubname.F90
|
||||||
|
- then
|
||||||
|
- usersubname=$usersubname.F90
|
||||||
|
- fi
|
||||||
|
- fi
|
||||||
|
+ usernoext=$user
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
|
||||||
|
+ usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
fi
|
||||||
|
@@ -2274,11 +2233,12 @@
|
||||||
|
#
|
||||||
|
# user subroutine used
|
||||||
|
#
|
||||||
|
+# add DAMASK options for linking
|
||||||
|
+ DAMASK="-lstdc++"
|
||||||
|
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
-# program=$user.marc
|
||||||
|
- program=$DIRJOB/`$BASENAME $user .f`.marc
|
||||||
|
+ program=$usernoext.marc
|
||||||
|
case $program in
|
||||||
|
\/* | \.\/*)
|
||||||
|
bd=
|
||||||
|
@@ -2391,7 +2351,7 @@
|
||||||
|
fi
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- execpath=$DIRJOB/`$BASENAME $user .f`.marc
|
||||||
|
+ execpath=$usernoext.marc
|
||||||
|
usersub=1
|
||||||
|
fi
|
||||||
|
export execpath
|
||||||
|
@@ -3274,44 +3234,27 @@
|
||||||
|
echo
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
- fi
|
||||||
|
-
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
fi
|
||||||
|
cat > $jid.runmarcscript << END4
|
||||||
|
if test "$user"
|
||||||
|
then
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- fi
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTRANMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTRANMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3331,6 +3274,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -3344,6 +3288,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
|
||||||
|
#
|
||||||
|
# run marc
|
||||||
|
@@ -3390,7 +3337,7 @@
|
||||||
|
fi
|
||||||
|
else
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes
|
||||||
|
@@ -3556,7 +3503,7 @@
|
||||||
|
# first copy over the user sub if local directories
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RCP $user.f $i:$DIR1/
|
||||||
|
+ $RCP $user $i:$DIR1/
|
||||||
|
fi
|
||||||
|
# do the compilation on the other machine
|
||||||
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
|
@@ -3569,21 +3516,21 @@
|
||||||
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
|
echo
|
||||||
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
+ $RSH $i $DIR2/tools/comp_damask_mp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
# check if successful, the new executable should be there
|
||||||
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
|
if test "$line"
|
||||||
|
then
|
||||||
|
echo compilation and linking successful on host $i
|
||||||
|
else
|
||||||
|
- echo "$0: compile failed for $user.f on host $i"
|
||||||
|
+ echo "$0: compile failed for $user on host $i"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
fi
|
||||||
|
# remove the user subroutine on remote machine
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RSH $i /bin/rm $remoteuser.f 2> /dev/null
|
||||||
|
+ $RSH $i /bin/rm $remoteuser 2> /dev/null
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
@@ -3593,39 +3540,27 @@
|
||||||
|
if test "$userhost"
|
||||||
|
then
|
||||||
|
echo
|
||||||
|
- echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
- fi
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
+ echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
fi
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTRANMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTRANMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
echo " $PRODUCT Exit number 3"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3645,6 +3580,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -3686,6 +3622,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi # if test $link
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
|
||||||
|
#
|
||||||
|
# run marc
|
||||||
|
@@ -3779,7 +3718,7 @@
|
||||||
|
else
|
||||||
|
#dllrun >0
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes;then
|
||||||
|
@@ -3904,7 +3843,7 @@
|
||||||
|
# first copy over the user sub if local directories
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RCP $user.f $i:$DIR1/
|
||||||
|
+ $RCP $user $i:$DIR1/
|
||||||
|
fi
|
||||||
|
# do the compilation on the other machine
|
||||||
|
if test ${dirstatus[$counter]} = "shared"
|
||||||
|
@@ -3917,20 +3856,20 @@
|
||||||
|
remoteuser=$DIR1/`$BASENAME $user`
|
||||||
|
$RSH $i /bin/rm $remoteprog 2> /dev/null
|
||||||
|
echo
|
||||||
|
- $RSH $i $DIR2/tools/comp_user $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
+ $RSH $i $DIR2/tools/comp_damask_mp $DIR2 $DIR1 $remoteuser $remoteprog
|
||||||
|
# check if successful, the new executable should be there
|
||||||
|
line=`$RSH $i /bin/ls $remoteprog 2> /dev/null`
|
||||||
|
if test "$line"
|
||||||
|
then
|
||||||
|
echo compilation and linking successful on host $i
|
||||||
|
else
|
||||||
|
- echo "$0: compile failed for $user.f on host $i"
|
||||||
|
+ echo "$0: compile failed for $user on host $i"
|
||||||
|
exit 1
|
||||||
|
fi
|
||||||
|
# remove the user subroutine on remote machine
|
||||||
|
if test ${dirstatus[$counter]} = "local"
|
||||||
|
then
|
||||||
|
- $RSH $i /bin/rm $remoteuser.f 2> /dev/null
|
||||||
|
+ $RSH $i /bin/rm $remoteuser 2> /dev/null
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
@@ -3940,37 +3879,25 @@
|
||||||
|
if test "$userhost"
|
||||||
|
then
|
||||||
|
echo
|
||||||
|
- echo "Compiling and linking user subroutine $user.f on host `hostname`"
|
||||||
|
- fi
|
||||||
|
- userobj=$DIRJOB/`$BASENAME $user .f`.o
|
||||||
|
- basefile=`$BASENAME $usersubname`
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- usersub=$DIRJOB/`$BASENAME $user .f`.F
|
||||||
|
- ln -sf "$user.f" "$usersub"
|
||||||
|
- else
|
||||||
|
- usersub=$usersubname
|
||||||
|
+ echo "Compiling and linking user subroutine $user on host `hostname`"
|
||||||
|
fi
|
||||||
|
+ userobj=$usernoext.o
|
||||||
|
if test $MACHINENAME = "CRAY"
|
||||||
|
then
|
||||||
|
- $FORTRAN $usersub || \
|
||||||
|
+ $DFORTRANMP $user || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
else
|
||||||
|
- $FORTRAN $usersub -o $userobj || \
|
||||||
|
+ $DFORTRANMP $user -o $userobj || \
|
||||||
|
{
|
||||||
|
- echo "$0: compile failed for $user.f"
|
||||||
|
+ echo "$0: compile failed for $user"
|
||||||
|
exit 1
|
||||||
|
}
|
||||||
|
/bin/rm $program 2>/dev/null
|
||||||
|
fi
|
||||||
|
- if test ${basefile##*.} = f
|
||||||
|
- then
|
||||||
|
- /bin/rm -f "$usersub"
|
||||||
|
- fi
|
||||||
|
fi # if test $user
|
||||||
|
|
||||||
|
|
||||||
|
@@ -3990,6 +3917,7 @@
|
||||||
|
$TKLIBS \
|
||||||
|
$MRCLIBS \
|
||||||
|
$METISLIBS \
|
||||||
|
+ $DAMASK \
|
||||||
|
$SFLIB \
|
||||||
|
$OPENSSL_LIB \
|
||||||
|
$SYSLIBS \
|
||||||
|
@@ -4030,7 +3958,9 @@
|
||||||
|
prgsav=yes
|
||||||
|
fi # if test $link
|
||||||
|
/bin/rm $userobj 2>/dev/null
|
||||||
|
-
|
||||||
|
+/bin/rm $DIRJOB/*.mod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*.smod 2>/dev/null
|
||||||
|
+/bin/rm $DIRJOB/*_genmod.f90 2>/dev/null
|
||||||
|
# done if no job id given
|
||||||
|
if test -z "$jid"
|
||||||
|
then
|
||||||
|
@@ -4149,7 +4079,7 @@
|
||||||
|
else
|
||||||
|
#dllrun >0
|
||||||
|
if test $cpdll = yes; then
|
||||||
|
- filename=`basename $usersubname .f`
|
||||||
|
+ filename=$usernoext
|
||||||
|
/bin/cp $DIRJOB/$marcdll $DIRJOB/${filename}_$marcdll 2>/dev/null
|
||||||
|
fi
|
||||||
|
if test $rmdll = yes;then
|
|
@ -0,0 +1,24 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -1,18 +1,5 @@
|
||||||
|
#!/bin/sh
|
||||||
|
-# This script opens a window running an editor. The default window is an
|
||||||
|
-# xterm, and the default editor is vi. These may be customized.
|
||||||
|
+# This script opens a window running an editor.
|
||||||
|
+# The command to invoke the editor is specified during DAMASK installation
|
||||||
|
|
||||||
|
-dir=
|
||||||
|
-for d in /usr/bin /usr/bin/X11; do
|
||||||
|
- if test -x "$d/xterm"; then
|
||||||
|
- dir="$d"
|
||||||
|
- break
|
||||||
|
- fi
|
||||||
|
-done
|
||||||
|
-
|
||||||
|
-if test -z "$dir"; then
|
||||||
|
- echo "$0: Could not find xterm"
|
||||||
|
- exit 1
|
||||||
|
-fi
|
||||||
|
-
|
||||||
|
-"$dir/xterm" -T "vi $*" -n "vi $*" -e vi $*
|
||||||
|
+%EDITOR% $*
|
|
@ -0,0 +1,38 @@
|
||||||
|
---
|
||||||
|
+++
|
||||||
|
@@ -63,10 +63,10 @@
|
||||||
|
if [ "$slv" != "" -a "$slv" != "marc" -a "$slv" != "datfit" ]; then
|
||||||
|
slv="-iam sfm"
|
||||||
|
fi
|
||||||
|
-if [ "$slv" == "marc" ]; then
|
||||||
|
+if [ "$slv" = "marc" ]; then
|
||||||
|
slv=""
|
||||||
|
fi
|
||||||
|
-if [ "$slv" == "datfit" ]; then
|
||||||
|
+if [ "$slv" = "datfit" ]; then
|
||||||
|
slv="-iam datfit"
|
||||||
|
fi
|
||||||
|
|
||||||
|
@@ -91,6 +91,7 @@
|
||||||
|
srcfile="-u $srcfile -save y"
|
||||||
|
;;
|
||||||
|
runsaved)
|
||||||
|
+ srcfile=${srcfile%.*}".marc"
|
||||||
|
srcfile="-prog $srcfile"
|
||||||
|
;;
|
||||||
|
esac
|
||||||
|
@@ -189,12 +190,12 @@
|
||||||
|
unset PYTHONPATH
|
||||||
|
|
||||||
|
if [ "$doe_first" = "-" ]; then # submit of regular Marc job
|
||||||
|
- "${DIR}/tools/run_marc" $slv -j $job -v n -b y $nprocds $nprocd \
|
||||||
|
+ "${DIR}/tools/run_damask_hmp" $slv -j $job -v n -b y $nprocds $nprocd \
|
||||||
|
$srcfile $restart $postfile $viewfactorsfile $hostfile \
|
||||||
|
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
|
||||||
|
$assem_recov_nthread $nthread $nsolver $mode $gpu > /dev/null 2>&1
|
||||||
|
else # submit of a DoE Marc job
|
||||||
|
- "${DIR}/tools/run_marc" $slv -j $job -v n -b n $nprocds $nprocd \
|
||||||
|
+ "${DIR}/tools/run_damask_hmp" $slv -j $job -v n -b n $nprocds $nprocd \
|
||||||
|
$srcfile $restart $postfile $viewfactorsfile $hostfile \
|
||||||
|
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
|
||||||
|
$assem_recov_nthread $nthread $nsolver $mode $gpu
|
Some files were not shown because too many files have changed in this diff Show More
Loading…
Reference in New Issue