adopted dNeq for constituent fraction sanity check
This commit is contained in:
Philip Eisenlohr
commit
592b3d043a
|
|
@ -6,4 +6,4 @@
|
||||||
*.bak
|
*.bak
|
||||||
*~
|
*~
|
||||||
bin
|
bin
|
||||||
PRIVATE
|
build
|
||||||
|
|
|
||||||
209
.gitlab-ci.yml
209
.gitlab-ci.yml
|
|
@ -14,13 +14,13 @@ stages:
|
||||||
- compileAbaqus2016
|
- compileAbaqus2016
|
||||||
- compileAbaqus2017
|
- compileAbaqus2017
|
||||||
- example
|
- example
|
||||||
- updateMaster
|
|
||||||
- createDocumentation
|
- createDocumentation
|
||||||
|
- updateMaster
|
||||||
|
- clean
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
before_script:
|
before_script:
|
||||||
- eval 'source $DAMASKROOT/DAMASK_env.sh'
|
- source $DAMASKROOT/DAMASK_env.sh
|
||||||
- module purge
|
|
||||||
- cd $DAMASKROOT/PRIVATE/testing
|
- cd $DAMASKROOT/PRIVATE/testing
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
|
|
@ -33,7 +33,7 @@ variables:
|
||||||
#================================================================================================
|
#================================================================================================
|
||||||
# Shortcut names
|
# Shortcut names
|
||||||
#================================================================================================
|
#================================================================================================
|
||||||
DAMASKROOT: "$HOME/GitlabCI_Pipeline_$CI_PIPELINE_ID/DAMASK"
|
DAMASKROOT: "$HOME/GitLabCI_Pipeline_$CI_PIPELINE_ID/DAMASK"
|
||||||
|
|
||||||
#================================================================================================
|
#================================================================================================
|
||||||
# Names of module files to load
|
# Names of module files to load
|
||||||
|
|
@ -53,10 +53,11 @@ variables:
|
||||||
MPICH_Intel: "$MPICH3_2Intel17_0"
|
MPICH_Intel: "$MPICH3_2Intel17_0"
|
||||||
# ++++++++++++ PETSc +++++++++++++++++++++++++++++++++++++++++++++++++
|
# ++++++++++++ PETSc +++++++++++++++++++++++++++++++++++++++++++++++++
|
||||||
PETSc3_6_4MPICH3_2Intel17_0: "Libraries/PETSc/3.6.4/Intel-17.0-MPICH-3.2"
|
PETSc3_6_4MPICH3_2Intel17_0: "Libraries/PETSc/3.6.4/Intel-17.0-MPICH-3.2"
|
||||||
|
PETSc3_7_6MPICH3_2Intel17_0: "Libraries/PETSc/3.7.5/Intel-17.0-MPICH-3.2"
|
||||||
PETSc3_7_5MPICH3_2Intel17_0: "Libraries/PETSc/3.7.5/Intel-17.0-MPICH-3.2"
|
PETSc3_7_5MPICH3_2Intel17_0: "Libraries/PETSc/3.7.5/Intel-17.0-MPICH-3.2"
|
||||||
PETSc3_7_5MPICH3_2GNU5_3: "Libraries/PETSc/3.7.5/GNU-5.3-MPICH-3.2"
|
PETSc3_7_5MPICH3_2GNU5_3: "Libraries/PETSc/3.7.5/GNU-5.3-MPICH-3.2"
|
||||||
# ------------ Defaults ----------------------------------------------
|
# ------------ Defaults ----------------------------------------------
|
||||||
PETSc_MPICH_Intel: "$PETSc3_7_5MPICH3_2Intel17_0"
|
PETSc_MPICH_Intel: "$PETSc3_7_6MPICH3_2Intel17_0"
|
||||||
PETSc_MPICH_GNU: "$PETSc3_7_5MPICH3_2GNU5_3"
|
PETSc_MPICH_GNU: "$PETSc3_7_5MPICH3_2GNU5_3"
|
||||||
# ++++++++++++ FEM +++++++++++++++++++++++++++++++++++++++++++++++++++
|
# ++++++++++++ FEM +++++++++++++++++++++++++++++++++++++++++++++++++++
|
||||||
Abaqus2016: "FEM/Abaqus/2016"
|
Abaqus2016: "FEM/Abaqus/2016"
|
||||||
|
|
@ -78,143 +79,239 @@ variables:
|
||||||
checkout:
|
checkout:
|
||||||
stage: prepareAll
|
stage: prepareAll
|
||||||
before_script:
|
before_script:
|
||||||
- echo 'Do nothing'
|
- echo $CI_PIPELINE_ID >> $HOME/GitLabCI.queue
|
||||||
|
- while [ $(awk "/$CI_PIPELINE_ID/{print NR}" $HOME/GitLabCI.queue) -ne 1 ];do sleep 5m; done
|
||||||
script:
|
script:
|
||||||
- mkdir -p $DAMASKROOT
|
- mkdir -p $DAMASKROOT
|
||||||
- git clone -b GitLabRunner git@magit1.mpie.de:damask/DAMASK.git $DAMASKROOT
|
- git clone -q git@magit1.mpie.de:damask/DAMASK.git $DAMASKROOT
|
||||||
- git clone git@magit1.mpie.de:damask/PRIVATE.git $DAMASKROOT/PRIVATE
|
- cd $DAMASKROOT
|
||||||
- eval 'source $DAMASKROOT/DAMASK_env.sh'
|
- git checkout $CI_COMMIT_SHA
|
||||||
- make -C $DAMASKROOT install
|
- git clone -q git@magit1.mpie.de:damask/PRIVATE.git
|
||||||
|
- source $DAMASKROOT/DAMASK_env.sh
|
||||||
|
- make processing
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
OrientationRelationship:
|
OrientationRelationship:
|
||||||
stage: preprocessing
|
stage: preprocessing
|
||||||
script: OrientationRelationship/test.py
|
script: OrientationRelationship/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Pre_SeedGeneration:
|
Pre_SeedGeneration:
|
||||||
stage: preprocessing
|
stage: preprocessing
|
||||||
script: PreProcessing_SeedGeneration/test.py
|
script: PreProcessing_SeedGeneration/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Pre_GeomGeneration:
|
Pre_GeomGeneration:
|
||||||
stage: preprocessing
|
stage: preprocessing
|
||||||
script: PreProcessing_GeomGeneration/test.py
|
script: PreProcessing_GeomGeneration/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Pre_GeomModification:
|
Pre_GeomModification:
|
||||||
stage: preprocessing
|
stage: preprocessing
|
||||||
script: PreProcessing_GeomModification/test.py
|
script: PreProcessing_GeomModification/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Pre_General:
|
Pre_General:
|
||||||
stage: preprocessing
|
stage: preprocessing
|
||||||
script: PreProcessing/test.py
|
script: PreProcessing/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Spectral_geometryPacking:
|
Spectral_geometryPacking:
|
||||||
stage: preprocessing
|
stage: preprocessing
|
||||||
script: Spectral_geometryPacking/test.py
|
script: Spectral_geometryPacking/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
Post_General:
|
Post_General:
|
||||||
stage: postprocessing
|
stage: postprocessing
|
||||||
script: PostProcessing/test.py
|
script: PostProcessing/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Post_GeometryReconstruction:
|
Post_GeometryReconstruction:
|
||||||
stage: postprocessing
|
stage: postprocessing
|
||||||
script: Spectral_geometryReconstruction/test.py
|
script: Spectral_geometryReconstruction/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Post_addCurl:
|
Post_addCurl:
|
||||||
stage: postprocessing
|
stage: postprocessing
|
||||||
script: addCurl/test.py
|
script: addCurl/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Post_addDivergence:
|
Post_addDivergence:
|
||||||
stage: postprocessing
|
stage: postprocessing
|
||||||
script: addDivergence/test.py
|
script: addDivergence/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Post_addGradient:
|
Post_addGradient:
|
||||||
stage: postprocessing
|
stage: postprocessing
|
||||||
script: addGradient/test.py
|
script: addGradient/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Post_ParaviewRelated:
|
Post_ParaviewRelated:
|
||||||
stage: postprocessing
|
stage: postprocessing
|
||||||
script: ParaviewRelated/test.py
|
script: ParaviewRelated/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
Compile_Intel:
|
Compile_Intel:
|
||||||
stage: compileSpectralIntel
|
stage: compileSpectralIntel
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel
|
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel
|
||||||
- SpectralAll_compileIfort/test.py
|
- SpectralAll_compile/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
Compile_GNU:
|
Compile_GNU:
|
||||||
stage: compileSpectralGNU
|
stage: compileSpectralGNU
|
||||||
script:
|
script:
|
||||||
- module load $GNUCompiler $MPICH_GNU $PETSc_MPICH_GNU
|
- module load $GNUCompiler $MPICH_GNU $PETSc_MPICH_GNU
|
||||||
- SpectralAll_compileGfortran/test.py
|
- SpectralAll_compile/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
Compile_Intel_Prepare:
|
Compile_Intel_Prepare:
|
||||||
stage: prepareSpectral
|
stage: prepareSpectral
|
||||||
script:
|
before_script:
|
||||||
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel
|
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel
|
||||||
- make -C $DAMASKROOT clean spectral install tidy
|
script:
|
||||||
|
- cd $DAMASKROOT
|
||||||
|
- source DAMASK_env.sh
|
||||||
|
- make clean spectral processing
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
Spectral_PackedGeometry:
|
Spectral_PackedGeometry:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script: Spectral_PackedGeometry/test.py
|
script: Spectral_PackedGeometry/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Spectral_parsingArguments:
|
Spectral_parsingArguments:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script: Spectral_parsingArguments/test.py
|
script: Spectral_parsingArguments/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
StateIntegration_compareVariants:
|
StateIntegration_compareVariants:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script: StateIntegration_compareVariants/test.py
|
script: StateIntegration_compareVariants/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
nonlocal_densityConservation:
|
nonlocal_densityConservation:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script: nonlocal_densityConservation/test.py
|
script: nonlocal_densityConservation/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Spectral_ipNeighborhood:
|
Spectral_ipNeighborhood:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script: Spectral_ipNeighborhood/test.py
|
script: Spectral_ipNeighborhood/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Nonlocal_Damage_DetectChanges:
|
Nonlocal_Damage_DetectChanges:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script: Nonlocal_Damage_DetectChanges/test.py
|
script: Nonlocal_Damage_DetectChanges/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
SpectralAll_restart:
|
SpectralAll_restart:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script: SpectralAll_restart/test.py
|
script: SpectralAll_restart/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
SpectralAll_parsingLoadCase:
|
SpectralAll_parsingLoadCase:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script: SpectralAll_parsingLoadCase/test.py
|
script: SpectralAll_parsingLoadCase/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
SpectralBasic_loadCaseRotation:
|
SpectralBasic_loadCaseRotation:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script: SpectralBasic_loadCaseRotation/test.py
|
script: SpectralBasic_loadCaseRotation/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Spectral_MPI:
|
Spectral_MPI:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel
|
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel
|
||||||
- Spectral_MPI/test.py
|
- Spectral_MPI/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Plasticity_DetectChanges:
|
Plasticity_DetectChanges:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script: Plasticity_DetectChanges/test.py
|
script: Plasticity_DetectChanges/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Homogenization:
|
Homogenization:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script: Homogenization/test.py
|
script: Homogenization/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Phenopowerlaw_singleSlip:
|
Phenopowerlaw_singleSlip:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script: Phenopowerlaw_singleSlip/test.py
|
script: Phenopowerlaw_singleSlip/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
HybridIA:
|
HybridIA:
|
||||||
stage: spectral
|
stage: spectral
|
||||||
script: HybridIA/test.py
|
script: HybridIA/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
Marc_compileIfort2014:
|
Marc_compileIfort2014:
|
||||||
|
|
@ -222,6 +319,9 @@ Marc_compileIfort2014:
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler16_0 $MSC2014
|
- module load $IntelCompiler16_0 $MSC2014
|
||||||
- Marc_compileIfort/test.py -m 2014
|
- Marc_compileIfort/test.py -m 2014
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
Marc_compileIfort2014.2:
|
Marc_compileIfort2014.2:
|
||||||
|
|
@ -229,6 +329,9 @@ Marc_compileIfort2014.2:
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler16_0 $MSC2014_2
|
- module load $IntelCompiler16_0 $MSC2014_2
|
||||||
- Marc_compileIfort/test.py -m 2014.2
|
- Marc_compileIfort/test.py -m 2014.2
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
Marc_compileIfort2015:
|
Marc_compileIfort2015:
|
||||||
|
|
@ -236,6 +339,9 @@ Marc_compileIfort2015:
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler16_0 $MSC2015
|
- module load $IntelCompiler16_0 $MSC2015
|
||||||
- Marc_compileIfort/test.py -m 2015
|
- Marc_compileIfort/test.py -m 2015
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
Marc_compileIfort2016:
|
Marc_compileIfort2016:
|
||||||
|
|
@ -243,6 +349,9 @@ Marc_compileIfort2016:
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler16_0 $MSC2016
|
- module load $IntelCompiler16_0 $MSC2016
|
||||||
- Marc_compileIfort/test.py -m 2016
|
- Marc_compileIfort/test.py -m 2016
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
Hex_elastic:
|
Hex_elastic:
|
||||||
|
|
@ -250,24 +359,36 @@ Hex_elastic:
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler16_0 $MSC
|
- module load $IntelCompiler16_0 $MSC
|
||||||
- Hex_elastic/test.py
|
- Hex_elastic/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
CubicFCC_elastic:
|
CubicFCC_elastic:
|
||||||
stage: marc
|
stage: marc
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler16_0 $MSC
|
- module load $IntelCompiler16_0 $MSC
|
||||||
- CubicFCC_elastic/test.py
|
- CubicFCC_elastic/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
CubicBCC_elastic:
|
CubicBCC_elastic:
|
||||||
stage: marc
|
stage: marc
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler16_0 $MSC
|
- module load $IntelCompiler16_0 $MSC
|
||||||
- CubicBCC_elastic/test.py
|
- CubicBCC_elastic/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
J2_plasticBehavior:
|
J2_plasticBehavior:
|
||||||
stage: marc
|
stage: marc
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler16_0 $MSC
|
- module load $IntelCompiler16_0 $MSC
|
||||||
- J2_plasticBehavior/test.py
|
- J2_plasticBehavior/test.py
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
Abaqus_compile2016:
|
Abaqus_compile2016:
|
||||||
|
|
@ -275,6 +396,9 @@ Abaqus_compile2016:
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler16_0 $Abaqus2016
|
- module load $IntelCompiler16_0 $Abaqus2016
|
||||||
- Abaqus_compileIfort/test.py -a 2016
|
- Abaqus_compileIfort/test.py -a 2016
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
Abaqus_compile2017:
|
Abaqus_compile2017:
|
||||||
|
|
@ -282,37 +406,43 @@ Abaqus_compile2017:
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler16_0 $Abaqus2017
|
- module load $IntelCompiler16_0 $Abaqus2017
|
||||||
- Abaqus_compileIfort/test.py -a 2017
|
- Abaqus_compileIfort/test.py -a 2017
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
SpectralExample:
|
SpectralExample:
|
||||||
stage: example
|
stage: example
|
||||||
|
script: SpectralAll_example/test.py
|
||||||
only:
|
only:
|
||||||
- development
|
- development
|
||||||
script: SpectralAll_example/test.py
|
|
||||||
|
|
||||||
AbaqusExample:
|
AbaqusExample:
|
||||||
stage: example
|
stage: example
|
||||||
only:
|
|
||||||
- development
|
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler16_0 $Abaqus
|
- module load $IntelCompiler16_0 $Abaqus
|
||||||
- Abaqus_example/test.py
|
- Abaqus_example/test.py
|
||||||
|
|
||||||
###################################################################################################
|
|
||||||
mergeIntoMaster:
|
|
||||||
stage: updateMaster
|
|
||||||
only:
|
only:
|
||||||
- development
|
- development
|
||||||
|
|
||||||
|
##################################################################################################
|
||||||
|
mergeIntoMaster:
|
||||||
|
stage: updateMaster
|
||||||
script:
|
script:
|
||||||
- eval 'cd $DAMASKROOT'
|
- cd $DAMASKROOT
|
||||||
- export DEVREV=$(git describe)
|
- export TESTEDREV=$(git describe) # might be detached from development branch
|
||||||
- git commit VERSION -m "[skip ci] updated version information after successful test of $DEVREV"
|
- echo $TESTEDREV > VERSION
|
||||||
|
- git commit VERSION -m "[skip ci] updated version information after successful test of $TESTEDREV"
|
||||||
|
- export UPDATEDREV=$(git describe) # tested state + 1 commit
|
||||||
- git checkout master
|
- git checkout master
|
||||||
- git merge development
|
- git merge $UPDATEDREV -s recursive -X ours # conflicts occur only for inconsistent state
|
||||||
- git status
|
- git push origin master # master is now tested version and has updated VERSION file
|
||||||
- git push origin master
|
|
||||||
- git checkout development
|
- git checkout development
|
||||||
- git push origin development
|
- git pull
|
||||||
|
- git merge master -s recursive -X ours -m "[skip ci] Merge branch 'master' into development" # only possible conflict is in VERSION file
|
||||||
|
- git push origin development # development is unchanged (as master is based on it) but has updated VERSION file
|
||||||
|
only:
|
||||||
|
- development
|
||||||
|
|
||||||
###################################################################################################
|
###################################################################################################
|
||||||
AbaqusExp:
|
AbaqusExp:
|
||||||
|
|
@ -320,21 +450,44 @@ AbaqusExp:
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel $Doxygen
|
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel $Doxygen
|
||||||
- $DAMASKROOT/PRIVATE/documenting/runDoxygen.sh $DAMASKROOT abaqus_exp
|
- $DAMASKROOT/PRIVATE/documenting/runDoxygen.sh $DAMASKROOT abaqus_exp
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
AbaqusStd:
|
AbaqusStd:
|
||||||
stage: createDocumentation
|
stage: createDocumentation
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel $Doxygen
|
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel $Doxygen
|
||||||
- $DAMASKROOT/PRIVATE/documenting/runDoxygen.sh $DAMASKROOT abaqus_std
|
- $DAMASKROOT/PRIVATE/documenting/runDoxygen.sh $DAMASKROOT abaqus_std
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Marc:
|
Marc:
|
||||||
stage: createDocumentation
|
stage: createDocumentation
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel $Doxygen
|
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel $Doxygen
|
||||||
- $DAMASKROOT/PRIVATE/documenting/runDoxygen.sh $DAMASKROOT marc
|
- $DAMASKROOT/PRIVATE/documenting/runDoxygen.sh $DAMASKROOT marc
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
Spectral:
|
Spectral:
|
||||||
stage: createDocumentation
|
stage: createDocumentation
|
||||||
script:
|
script:
|
||||||
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel $Doxygen
|
- module load $IntelCompiler $MPICH_Intel $PETSc_MPICH_Intel $Doxygen
|
||||||
- $DAMASKROOT/PRIVATE/documenting/runDoxygen.sh $DAMASKROOT spectral
|
- $DAMASKROOT/PRIVATE/documenting/runDoxygen.sh $DAMASKROOT spectral
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
||||||
|
###################################################################################################
|
||||||
|
removeLock:
|
||||||
|
stage: clean
|
||||||
|
before_script:
|
||||||
|
- echo 'Do nothing'
|
||||||
|
when: always
|
||||||
|
script: sed -i "/$CI_PIPELINE_ID/d" $HOME/GitLabCI.queue
|
||||||
|
except:
|
||||||
|
- master
|
||||||
|
- release
|
||||||
|
|
|
||||||
|
|
@ -0,0 +1,481 @@
|
||||||
|
########################################################################################
|
||||||
|
# Compiler options for building DAMASK
|
||||||
|
cmake_minimum_required (VERSION 2.8.8 FATAL_ERROR)
|
||||||
|
|
||||||
|
#---------------------------------------------------------------------------------------
|
||||||
|
# Find PETSc from system environment
|
||||||
|
set(PETSC_DIR $ENV{PETSC_DIR})
|
||||||
|
if ("${PETSC_DIR}" STREQUAL "")
|
||||||
|
message (FATAL_ERROR "PETSC_DIR is not defined")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
set (petsc_conf_variables "${PETSC_DIR}/lib/petsc/conf/variables")
|
||||||
|
set (petsc_conf_rules "${PETSC_DIR}/lib/petsc/conf/rules" )
|
||||||
|
|
||||||
|
# Use existing variables from PETSc
|
||||||
|
# https://github.com/jedbrown/cmake-modules/blob/master/FindPETSc.cmake
|
||||||
|
|
||||||
|
# Generate a temporary makefile to probe the PETSc configuration
|
||||||
|
# This file will be deleted
|
||||||
|
# once the settings from PETSc are parsed into CMake
|
||||||
|
|
||||||
|
exec_program (mktemp ARGS -d OUTPUT_VARIABLE TEMPDIR)
|
||||||
|
set (petsc_config_makefile "${TEMPDIR}/Makefile.petsc")
|
||||||
|
file (WRITE
|
||||||
|
"${petsc_config_makefile}"
|
||||||
|
"## This file was auto generated by CMake
|
||||||
|
# PETSC_DIR = ${PETSC_DIR}
|
||||||
|
SHELL = /bin/sh
|
||||||
|
include ${petsc_conf_rules}
|
||||||
|
include ${petsc_conf_variables}
|
||||||
|
INCLUDE_DIRS := \${PETSC_FC_INCLUDES}
|
||||||
|
LIBRARIES := \${PETSC_WITH_EXTERNAL_LIB}
|
||||||
|
COMPILERF := \${FC}
|
||||||
|
COMPILERC := \${CC}
|
||||||
|
LINKERNAME := \${FLINKER}
|
||||||
|
includes:
|
||||||
|
\t@echo \${INCLUDE_DIRS}
|
||||||
|
extlibs:
|
||||||
|
\t@echo \${LIBRARIES}
|
||||||
|
compilerf:
|
||||||
|
\t@echo \${COMPILERF}
|
||||||
|
compilerc:
|
||||||
|
\t@echo \${COMPILERC}
|
||||||
|
linker:
|
||||||
|
\t@echo \${LINKERNAME}
|
||||||
|
")
|
||||||
|
|
||||||
|
# CMake will execute each target in the ${petsc_config_makefile}
|
||||||
|
# to acquire corresponding PETSc Variables.
|
||||||
|
find_program (MAKE_EXECUTABLE NAMES make gmake)
|
||||||
|
# Find the PETSc includes directory settings
|
||||||
|
execute_process (COMMAND ${MAKE_EXECUTABLE} --no-print-directory -f ${petsc_config_makefile} "includes"
|
||||||
|
RESULT_VARIABLE PETSC_INCLUDES_RETURN
|
||||||
|
OUTPUT_VARIABLE petsc_includes
|
||||||
|
OUTPUT_STRIP_TRAILING_WHITESPACE)
|
||||||
|
# Find the PETSc external linking directory settings
|
||||||
|
# required for final linking, must be appended after the executable
|
||||||
|
execute_process (COMMAND ${MAKE_EXECUTABLE} --no-print-directory -f ${petsc_config_makefile} "extlibs"
|
||||||
|
RESULT_VARIABLE PETSC_EXTERNAL_LIB_RETURN
|
||||||
|
OUTPUT_VARIABLE petsc_external_lib
|
||||||
|
OUTPUT_STRIP_TRAILING_WHITESPACE)
|
||||||
|
# PETSc specified fortran compiler
|
||||||
|
execute_process (COMMAND ${MAKE_EXECUTABLE} --no-print-directory -f ${petsc_config_makefile} "compilerf"
|
||||||
|
RESULT_VARIABLE PETSC_MPIFC_RETURN
|
||||||
|
OUTPUT_VARIABLE PETSC_MPIFC
|
||||||
|
OUTPUT_STRIP_TRAILING_WHITESPACE)
|
||||||
|
# PETSc specified C compiler
|
||||||
|
execute_process (COMMAND ${MAKE_EXECUTABLE} --no-print-directory -f ${petsc_config_makefile} "compilerc"
|
||||||
|
RESULT_VARIABLE PETSC_MPICC_RETURN
|
||||||
|
OUTPUT_VARIABLE PETSC_MPICC
|
||||||
|
OUTPUT_STRIP_TRAILING_WHITESPACE)
|
||||||
|
# PETSc specified linker (MPIF90 + PETSc linking flags)
|
||||||
|
execute_process (COMMAND ${MAKE_EXECUTABLE} --no-print-directory -f ${petsc_config_makefile} "linker"
|
||||||
|
RESULT_VARIABLE PETSC_LINKER_RETURN
|
||||||
|
OUTPUT_VARIABLE PETSC_LINKER
|
||||||
|
OUTPUT_STRIP_TRAILING_WHITESPACE)
|
||||||
|
# Remove temporary makefile, no need to keep it anymore.
|
||||||
|
file (REMOVE_RECURSE ${TEMPDIR})
|
||||||
|
|
||||||
|
# Remove duplicate compiler and linker flags
|
||||||
|
string (REGEX MATCHALL "-I([^\" ]+)" TMP_LIST "${petsc_includes}")
|
||||||
|
list (REMOVE_DUPLICATES TMP_LIST)
|
||||||
|
foreach (dir ${TMP_LIST})
|
||||||
|
set (PETSC_INCLUDES "${PETSC_INCLUDES} ${dir}")
|
||||||
|
endforeach (dir)
|
||||||
|
string (REGEX MATCHALL "-[lLW]([^\" ]+)" TMP_LIST "${petsc_external_lib}")
|
||||||
|
list (REMOVE_DUPLICATES TMP_LIST)
|
||||||
|
foreach (exlib ${TMP_LIST})
|
||||||
|
set (PETSC_EXTERNAL_LIB "${PETSC_EXTERNAL_LIB} ${exlib}")
|
||||||
|
endforeach (exlib)
|
||||||
|
|
||||||
|
message ("Found PETSC_DIR:\n${PETSC_DIR}\n" )
|
||||||
|
message ("Found PETSC_INCLUDES:\n${PETSC_INCLUDES}\n" )
|
||||||
|
message ("Found PETSC_EXTERNAL_LIB:\n${PETSC_EXTERNAL_LIB}\n")
|
||||||
|
message ("Found PETSC_LINKER:\n${PETSC_LINKER}\n" )
|
||||||
|
message ("Found MPI Fortran Compiler:\n${PETSC_MPIFC}\n" )
|
||||||
|
message ("Found MPI C Compiler:\n${PETSC_MPICC}\n" )
|
||||||
|
|
||||||
|
#---------------------------------------------------------------------------------------
|
||||||
|
# Now start to care about DAMASK
|
||||||
|
|
||||||
|
# DAMASK solver defines project to build
|
||||||
|
if ("${DAMASK_SOLVER}" STREQUAL "SPECTRAL")
|
||||||
|
project (DAMASK_spectral Fortran C)
|
||||||
|
add_definitions (-DSpectral)
|
||||||
|
message ("Building Spectral Solver\n")
|
||||||
|
elseif ("${DAMASK_SOLVER}" STREQUAL "FEM")
|
||||||
|
project (DAMASK_FEM Fortran C)
|
||||||
|
add_definitions (-DFEM)
|
||||||
|
message ("Building FEM Solver\n")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
if ("${CMAKE_BUILD_TYPE}" STREQUAL "")
|
||||||
|
set (CMAKE_BUILD_TYPE "RELEASE")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
# set compiler and linker commands (need to be done after defining the project)
|
||||||
|
# https://cmake.org/Wiki/CMake_FAQ#How_do_I_use_a_different_compiler.3F
|
||||||
|
set (CMAKE_Fortran_COMPILER "${PETSC_MPIFC}")
|
||||||
|
set (CMAKE_C_COMPILER "${PETSC_MPICC}")
|
||||||
|
set (CMAKE_LINKER "${PETSC_LINKER}")
|
||||||
|
|
||||||
|
# Predefined sets for OPTIMIZATION/OPENMP based on BUILD_TYPE
|
||||||
|
if ("${CMAKE_BUILD_TYPE}" STREQUAL "DEBUG" OR "${CMAKE_BUILD_TYPE}" STREQUAL "SYNTAXONLY" )
|
||||||
|
set (PARALLEL "OFF")
|
||||||
|
set (OPTI "OFF")
|
||||||
|
elseif ("${CMAKE_BUILD_TYPE}" STREQUAL "RELEASE")
|
||||||
|
set (PARALLEL "ON")
|
||||||
|
set (OPTI "DEFENSIVE")
|
||||||
|
elseif ("${CMAKE_BUILD_TYPE}" STREQUAL "PERFORMANCE")
|
||||||
|
set (PARALLEL "ON")
|
||||||
|
set (OPTI "AGGRESSIVE")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
# $OPTIMIZATION takes precedence over $BUILD_TYPE defaults
|
||||||
|
if ("${OPTIMIZATION}" STREQUAL "")
|
||||||
|
set (OPTIMIZATION "${OPTI}")
|
||||||
|
else ()
|
||||||
|
set (OPTIMIZATION "${OPTIMIZATION}")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
# $OPENMP takes precedence over $BUILD_TYPE defaults
|
||||||
|
if ("${OPENMP}" STREQUAL "")
|
||||||
|
set (OPENMP "${PARALLEL}")
|
||||||
|
else ()
|
||||||
|
set(OPENMP "${OPENMP}")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
# syntax check only (mainly for pre-receive hook, works only with gfortran)
|
||||||
|
if ("${CMAKE_BUILD_TYPE}" STREQUAL "SYNTAXONLY" )
|
||||||
|
set (BUILDCMD_POST "${BUILDCMD_POST} -fsyntax-only")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
# Parse DAMASK_BIN from CONFIG file
|
||||||
|
file (READ "CONFIG" CONFIGFILE)
|
||||||
|
string (REGEX REPLACE ";" "\\\\;" CONFIGFILE "${CONFIGFILE}")
|
||||||
|
string (REGEX REPLACE "\n" ";" CONFIGFILE "${CONFIGFILE}")
|
||||||
|
foreach (item ${CONFIGFILE})
|
||||||
|
string (REGEX MATCH ".+DAMASK_BIN.+" item ${item})
|
||||||
|
if (item)
|
||||||
|
string (REGEX REPLACE "set" "" item "${item}")
|
||||||
|
string (REGEX REPLACE "=" " " item "${item}")
|
||||||
|
string (REGEX REPLACE "\\\${DAMASK_ROOT}" "${PROJECT_SOURCE_DIR}" item "${item}")
|
||||||
|
string (REPLACE "DAMASK_BIN" ";" STRING_LIST ${item})
|
||||||
|
list (GET STRING_LIST 1 item)
|
||||||
|
string (STRIP "${item}" CMAKE_INSTALL_PREFIX)
|
||||||
|
endif ()
|
||||||
|
endforeach(item ${CONFIGFILE})
|
||||||
|
|
||||||
|
# Parse DAMASK version from VERSION file
|
||||||
|
find_program (CAT_EXECUTABLE NAMES cat)
|
||||||
|
execute_process (COMMAND ${CAT_EXECUTABLE} ${PROJECT_SOURCE_DIR}/VERSION
|
||||||
|
RESULT_VARIABLE DAMASK_VERSION_RETURN
|
||||||
|
OUTPUT_VARIABLE DAMASK_V
|
||||||
|
OUTPUT_STRIP_TRAILING_WHITESPACE)
|
||||||
|
add_definitions (-DDAMASKVERSION="${DAMASK_V}")
|
||||||
|
|
||||||
|
# definition of other macros
|
||||||
|
add_definitions (-DPETSc)
|
||||||
|
add_definitions (-DFLOAT=8)
|
||||||
|
add_definitions (-DINT=4)
|
||||||
|
|
||||||
|
set (DAMASK_INCLUDE_FLAGS "${DAMASK_INCLUDE_FLAGS} ${PETSC_INCLUDES}")
|
||||||
|
|
||||||
|
###################################################################################################
|
||||||
|
# Intel Compiler
|
||||||
|
###################################################################################################
|
||||||
|
if (${CMAKE_Fortran_COMPILER_ID} STREQUAL "Intel")
|
||||||
|
|
||||||
|
if (OPENMP)
|
||||||
|
set (OPENMP_FLAGS "-qopenmp -parallel")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
if ("${OPTIMIZATION}" STREQUAL "OFF")
|
||||||
|
set (OPTIMIZATION_FLAGS "-O0 -no-ip")
|
||||||
|
elseif ("${OPTIMIZATION}" STREQUAL "DEFENSIVE")
|
||||||
|
set (OPTIMIZATION_FLAGS "-O2")
|
||||||
|
elseif ("${OPTIMIZATION}" STREQUAL "AGGRESSIVE")
|
||||||
|
set (OPTIMIZATION_FLAGS "-ipo -O3 -no-prec-div -fp-model fast=2 -xHost")
|
||||||
|
# -fast = -ipo, -O3, -no-prec-div, -static, -fp-model fast=2, and -xHost"
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
set (STANDARD_CHECK "-stand f08 -standard-semantics")
|
||||||
|
set (LINKER_FLAGS "${LINKER_FLAGS} -shared-intel")
|
||||||
|
# Link against shared Intel libraries instead of static ones
|
||||||
|
|
||||||
|
#------------------------------------------------------------------------------------------------
|
||||||
|
# Fine tuning compilation options
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -fpp")
|
||||||
|
# preprocessor
|
||||||
|
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -ftz")
|
||||||
|
# flush underflow to zero, automatically set if -O[1,2,3]
|
||||||
|
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -assume")
|
||||||
|
# assume ...
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} byterecl")
|
||||||
|
# ... record length is given in bytes (also set by -standard-semantics)
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS},fpe_summary")
|
||||||
|
# ... print list of floating point exceptions occured during execution
|
||||||
|
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -diag-disable")
|
||||||
|
# disables warnings ...
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} 5268")
|
||||||
|
# ... the text exceeds right hand column allowed on the line (we have only comments there)
|
||||||
|
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -warn")
|
||||||
|
# enables warnings ...
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} declarations")
|
||||||
|
# ... any undeclared names (alternative name: -implicitnone)
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS},general")
|
||||||
|
# ... warning messages and informational messages are issued by the compiler
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS},usage")
|
||||||
|
# ... questionable programming practices
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS},interfaces")
|
||||||
|
# ... checks the interfaces of all SUBROUTINEs called and FUNCTIONs invoked in your compilation against an external set of interface blocks
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS},ignore_loc")
|
||||||
|
# ... %LOC is stripped from an actual argument
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS},alignments")
|
||||||
|
# ... data that is not naturally aligned
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS},unused")
|
||||||
|
# ... declared variables that are never used
|
||||||
|
|
||||||
|
# Additional options
|
||||||
|
# -warn: enables warnings, where
|
||||||
|
# truncated_source: Determines whether warnings occur when source exceeds the maximum column width in fixed-format files.
|
||||||
|
# (too many warnings because we have comments beyond character 132)
|
||||||
|
# uncalled: Determines whether warnings occur when a statement function is never called
|
||||||
|
# all:
|
||||||
|
# -name as_is: case sensitive Fortran!
|
||||||
|
|
||||||
|
#------------------------------------------------------------------------------------------------
|
||||||
|
# Runtime debugging
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -g")
|
||||||
|
# Generate symbolic debugging information in the object file
|
||||||
|
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -traceback")
|
||||||
|
# Generate extra information in the object file to provide source file traceback information when a severe error occurs at run time
|
||||||
|
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -gen-interfaces")
|
||||||
|
# Generate an interface block for each routine. http://software.intel.com/en-us/blogs/2012/01/05/doctor-fortran-gets-explicit-again/
|
||||||
|
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -fp-stack-check")
|
||||||
|
# Generate extra code after every function call to ensure that the floating-point (FP) stack is in the expected state
|
||||||
|
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -fp-model strict")
|
||||||
|
# Trap uninitalized variables
|
||||||
|
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -check" )
|
||||||
|
# Checks at runtime ...
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} bounds")
|
||||||
|
# ... if an array index is too small (<1) or too large!
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS},format")
|
||||||
|
# ... for the data type of an item being formatted for output.
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS},output_conversion")
|
||||||
|
# ... for the fit of data items within a designated format descriptor field.
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS},pointers")
|
||||||
|
# ... for certain disassociated or uninitialized pointers or unallocated allocatable objects.
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS},uninit")
|
||||||
|
# ... for uninitialized variables.
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -ftrapuv")
|
||||||
|
# ... initializes stack local variables to an unusual value to aid error detection
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -fpe-all0")
|
||||||
|
# ... capture all floating-point exceptions, sets -ftz automatically
|
||||||
|
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -warn")
|
||||||
|
# enables warnings ...
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} errors")
|
||||||
|
# ... warnings are changed to errors
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS},stderrors")
|
||||||
|
# ... warnings about Fortran standard violations are changed to errors
|
||||||
|
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -debug-parameters all")
|
||||||
|
# generate debug information for parameters
|
||||||
|
|
||||||
|
# Additional options
|
||||||
|
# -heap-arrays: Should not be done for OpenMP, but set "ulimit -s unlimited" on shell. Probably it helps also to unlimit other limits
|
||||||
|
# -check: Checks at runtime, where
|
||||||
|
# arg_temp_created: will cause a lot of warnings because we create a bunch of temporary arrays (performance?)
|
||||||
|
# stack:
|
||||||
|
|
||||||
|
#------------------------------------------------------------------------------------------------
|
||||||
|
# precision settings
|
||||||
|
set (PRECISION_FLAGS "${PRECISION_FLAGS} -real-size 64")
|
||||||
|
# set precision for standard real to 32 | 64 | 128 (= 4 | 8 | 16 bytes, type pReal is always 8 bytes)
|
||||||
|
set (PRECISION_FLAGS "${PRECISION_FLAGS} -integer-size 32")
|
||||||
|
# set precision for standard int to 16 | 32 | 64 (= 2 | 4 | 8 bytes, type pInt is always 4 bytes)
|
||||||
|
|
||||||
|
|
||||||
|
###################################################################################################
|
||||||
|
# GNU Compiler
|
||||||
|
###################################################################################################
|
||||||
|
elseif(${CMAKE_Fortran_COMPILER_ID} STREQUAL "GNU")
|
||||||
|
|
||||||
|
if (OPENMP)
|
||||||
|
set (OPENMP_FLAGS "-fopenmp")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
if ("${OPTIMIZATION}" STREQUAL "OFF")
|
||||||
|
set (OPTIMIZATION_FLAGS "-O0" )
|
||||||
|
elseif ("${OPTIMIZATION}" STREQUAL "DEFENSIVE")
|
||||||
|
set (OPTIMIZATION_FLAGS "-O2")
|
||||||
|
elseif ("${OPTIMIZATION}" STREQUAL "AGGRESSIVE")
|
||||||
|
set (OPTIMIZATION_FLAGS "-O3 -ffast-math -funroll-loops -ftree-vectorize")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
set (STANDARD_CHECK "-std=f2008ts -pedantic-errors" )
|
||||||
|
set (LINKER_FLAGS "${LINKER_FLAGS} -Wl")
|
||||||
|
# options parsed directly to the linker
|
||||||
|
set (LINKER_FLAGS "${LINKER_FLAGS},-undefined,dynamic_lookup" )
|
||||||
|
# ensure to link against dynamic libraries
|
||||||
|
|
||||||
|
#------------------------------------------------------------------------------------------------
|
||||||
|
# Fine tuning compilation options
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -xf95-cpp-input")
|
||||||
|
# preprocessor
|
||||||
|
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -ffree-line-length-132")
|
||||||
|
# restrict line length to the standard 132 characters (lattice.f90 require more characters)
|
||||||
|
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -fimplicit-none")
|
||||||
|
# assume "implicit none" even if not present in source
|
||||||
|
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -fmodule-private")
|
||||||
|
# assume "private" even if not present in source
|
||||||
|
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -Wall")
|
||||||
|
# sets the following Fortran options:
|
||||||
|
# -Waliasing: warn about possible aliasing of dummy arguments. Specifically, it warns if the same actual argument is associated with a dummy argument with "INTENT(IN)" and a dummy argument with "INTENT(OUT)" in a call with an explicit interface.
|
||||||
|
# -Wampersand: checks if a character expression is continued proberly by an ampersand at the end of the line and at the beginning of the new line
|
||||||
|
# -Warray-bounds: checks if array reference is out of bounds at compile time. use -fcheck-bounds to also check during runtime
|
||||||
|
# -Wconversion: warn about implicit conversions between different type
|
||||||
|
# -Wsurprising: warn when "suspicious" code constructs are encountered. While technically legal these usually indicate that an error has been made.
|
||||||
|
# -Wc-binding-type:
|
||||||
|
# -Wintrinsics-std: only standard intrisics are available, e.g. "call flush(6)" will cause an error
|
||||||
|
# -Wno-tabs: do not allow tabs in source
|
||||||
|
# -Wintrinsic-shadow: warn if a user-defined procedure or module procedure has the same name as an intrinsic
|
||||||
|
# -Wline-truncation:
|
||||||
|
# -Wtarget-lifetime:
|
||||||
|
# -Wreal-q-constant: warn about real-literal-constants with 'q' exponent-letter
|
||||||
|
# -Wunused: a number of unused-xxx warnings
|
||||||
|
# and sets the general (non-Fortran options) options:
|
||||||
|
# -Waddress
|
||||||
|
# -Warray-bounds (only with -O2)
|
||||||
|
# -Wc++11-compat
|
||||||
|
# -Wchar-subscripts
|
||||||
|
# -Wcomment
|
||||||
|
# -Wformat
|
||||||
|
# -Wmaybe-uninitialized
|
||||||
|
# -Wnonnull
|
||||||
|
# -Wparentheses
|
||||||
|
# -Wpointer-sign
|
||||||
|
# -Wreorder
|
||||||
|
# -Wreturn-type
|
||||||
|
# -Wsequence-point
|
||||||
|
# -Wstrict-aliasing
|
||||||
|
# -Wstrict-overflow=1
|
||||||
|
# -Wswitch
|
||||||
|
# -Wtrigraphs
|
||||||
|
# -Wuninitialized
|
||||||
|
# -Wunknown-pragmas
|
||||||
|
# -Wunused-function
|
||||||
|
# -Wunused-label
|
||||||
|
# -Wunused-value
|
||||||
|
# -Wunused-variable
|
||||||
|
# -Wvolatile-register-var
|
||||||
|
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -Wextra")
|
||||||
|
# sets the following Fortran options:
|
||||||
|
# -Wunuses-parameter:
|
||||||
|
# -Wcompare-reals:
|
||||||
|
# and sets the general (non-Fortran options) options:
|
||||||
|
# -Wclobbered
|
||||||
|
# -Wempty-body
|
||||||
|
# -Wignored-qualifiers
|
||||||
|
# -Wmissing-field-initializers
|
||||||
|
# -Woverride-init
|
||||||
|
# -Wsign-compare
|
||||||
|
# -Wtype-limits
|
||||||
|
# -Wuninitialized
|
||||||
|
# -Wunused-but-set-parameter (only with -Wunused or -Wall)
|
||||||
|
# -Wno-globals
|
||||||
|
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -Wcharacter-truncation")
|
||||||
|
# warn if character expressions (strings) are truncated
|
||||||
|
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -Wunderflow")
|
||||||
|
# produce a warning when numerical constant expressions are encountered, which yield an UNDERFLOW during compilation
|
||||||
|
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -Wsuggest-attribute=pure")
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -Wsuggest-attribute=noreturn")
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -Wconversion-extra")
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -Wimplicit-procedure")
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -Wno-unused-parameter")
|
||||||
|
set (COMPILE_FLAGS "${COMPILE_FLAGS} -ffpe-summary=all")
|
||||||
|
# print summary of floating point exeptions (invalid,zero,overflow,underflow,inexact,denormal)
|
||||||
|
|
||||||
|
# Additional options
|
||||||
|
# -Warray-temporarieswarnings: because we have many temporary arrays (performance issue?):
|
||||||
|
# -Wimplicit-interface: no interfaces for lapack/MPI routines
|
||||||
|
# -Wunsafe-loop-optimizations: warn if the loop cannot be optimized due to nontrivial assumptions.
|
||||||
|
|
||||||
|
#------------------------------------------------------------------------------------------------
|
||||||
|
# Runtime debugging
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -ffpe-trap=invalid,zero,overflow")
|
||||||
|
# stop execution if floating point exception is detected (NaN is silent)
|
||||||
|
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -g")
|
||||||
|
# Generate symbolic debugging information in the object file
|
||||||
|
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -fbacktrace")
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -fdump-core")
|
||||||
|
set (DEBUG_FLAGS "${DEBUG_FLAGS} -fcheck=all")
|
||||||
|
# checks for (array-temps,bounds,do,mem,pointer,recursion)
|
||||||
|
|
||||||
|
# Additional options
|
||||||
|
# -ffpe-trap=precision,denormal,underflow
|
||||||
|
#------------------------------------------------------------------------------------------------
|
||||||
|
# precision settings
|
||||||
|
set (PRECISION_FLAGS "${PRECISION_FLAGS} -fdefault-real-8")
|
||||||
|
# set precision to 8 bytes for standard real (=8 for pReal). Will set size of double to 16 bytes as long as -fdefault-double-8 is not set
|
||||||
|
|
||||||
|
set (PRECISION_FLAGS "${PRECISION_FLAGS} -fdefault-double-8")
|
||||||
|
# set precision to 8 bytes for double real, would be 16 bytes if -fdefault-real-8 is used
|
||||||
|
|
||||||
|
# Additional options
|
||||||
|
# -fdefault-integer-8: Use it to set precision to 8 bytes for integer, don't use it for the standard case of pInt=4 (there is no -fdefault-integer-4)
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
set (CMAKE_Fortran_FLAGS_${CMAKE_BUILD_TYPE} "${BUILDCMD_PRE} ${OPENMP_FLAGS} ${STANDARD_CHECK} ${OPTIMIZATION_FLAGS} ${COMPILE_FLAGS} ${PRECISION_FLAGS}")
|
||||||
|
set (CMAKE_Fortran_LINK_EXECUTABLE "${BUILDCMD_PRE} ${CMAKE_LINKER} ${OPENMP_FLAGS} ${OPTIMIZATION_FLAGS} ${LINKER_FLAGS}")
|
||||||
|
|
||||||
|
if ("${CMAKE_BUILD_TYPE}" STREQUAL "DEBUG")
|
||||||
|
set (CMAKE_Fortran_FLAGS_${CMAKE_BUILD_TYPE} "${CMAKE_Fortran_FLAGS_${CMAKE_BUILD_TYPE}} ${DEBUG_FLAGS}")
|
||||||
|
set (CMAKE_Fortran_LINK_EXECUTABLE "${CMAKE_Fortran_LINK_EXECUTABLE} ${DEBUG_FLAGS}")
|
||||||
|
endif ()
|
||||||
|
|
||||||
|
set (CMAKE_Fortran_FLAGS_${CMAKE_BUILD_TYPE} "${CMAKE_Fortran_FLAGS_${CMAKE_BUILD_TYPE}} ${DAMASK_INCLUDE_FLAGS} ${BUILDCMD_POST}")
|
||||||
|
set (CMAKE_Fortran_LINK_EXECUTABLE "${CMAKE_Fortran_LINK_EXECUTABLE} <OBJECTS> -o <TARGET> <LINK_LIBRARIES> ${PETSC_EXTERNAL_LIB} ${BUILDCMD_POST}")
|
||||||
|
|
||||||
|
message ("Fortran Compiler Flags:\n${CMAKE_Fortran_FLAGS_${CMAKE_BUILD_TYPE}}\n")
|
||||||
|
message ("C Compiler Flags:\n${CMAKE_C_FLAGS_${CMAKE_BUILD_TYPE}}\n")
|
||||||
|
message ("Fortran Linker Command:\n${CMAKE_Fortran_LINK_EXECUTABLE}\n")
|
||||||
|
|
||||||
|
# location of code
|
||||||
|
add_subdirectory (src)
|
||||||
|
|
||||||
|
# INSTALL BUILT BINARIES
|
||||||
|
if ("${CMAKE_BUILD_TYPE}" STREQUAL "SYNTAXONLY")
|
||||||
|
exec_program (mktemp ARGS -d OUTPUT_VARIABLE BLACK_HOLE)
|
||||||
|
install (PROGRAMS ${PROJECT_BINARY_DIR}/src/prec.mod
|
||||||
|
DESTINATION ${BLACK_HOLE})
|
||||||
|
else ()
|
||||||
|
if ("${PROJECT_NAME}" STREQUAL "DAMASK_spectral")
|
||||||
|
install (PROGRAMS ${PROJECT_BINARY_DIR}/src/DAMASK_spectral
|
||||||
|
DESTINATION ${CMAKE_INSTALL_PREFIX})
|
||||||
|
elseif ("${PROJECT_NAME}" STREQUAL "DAMASK_FEM")
|
||||||
|
install (PROGRAMS ${PROJECT_BINARY_DIR}/src/DAMASK_FEM
|
||||||
|
DESTINATION ${CMAKE_INSTALL_PREFIX})
|
||||||
|
endif ()
|
||||||
|
endif ()
|
||||||
|
|
@ -25,11 +25,11 @@ if [[ "x$DAMASK_BIN" != "x" && ! $(echo ":$PATH:" | grep $DAMASK_BIN:) ]]; then
|
||||||
export PATH=$DAMASK_BIN:$PATH
|
export PATH=$DAMASK_BIN:$PATH
|
||||||
fi
|
fi
|
||||||
|
|
||||||
SOLVER=$(which DAMASK_spectral 2>/dev/null)
|
SOLVER=$(which DAMASK_spectral || true 2>/dev/null)
|
||||||
if [ "x$SOLVER" == "x" ]; then
|
if [ "x$SOLVER" == "x" ]; then
|
||||||
SOLVER='Not found!'
|
SOLVER='Not found!'
|
||||||
fi
|
fi
|
||||||
PROCESSING=$(which postResults 2>/dev/null)
|
PROCESSING=$(which postResults || true 2>/dev/null)
|
||||||
if [ "x$PROCESSING" == "x" ]; then
|
if [ "x$PROCESSING" == "x" ]; then
|
||||||
PROCESSING='Not found!'
|
PROCESSING='Not found!'
|
||||||
fi
|
fi
|
||||||
|
|
@ -39,12 +39,15 @@ fi
|
||||||
|
|
||||||
# according to http://software.intel.com/en-us/forums/topic/501500
|
# according to http://software.intel.com/en-us/forums/topic/501500
|
||||||
# this seems to make sense for the stack size
|
# this seems to make sense for the stack size
|
||||||
FREE=$(which free 2>/dev/null)
|
FREE=$(type -p free 2>/dev/null)
|
||||||
if [ "x$FREE" != "x" ]; then
|
if [ "x$FREE" != "x" ]; then
|
||||||
freeMem=$(free -k | grep -E '(Mem|Speicher):' | awk '{print $4;}')
|
freeMem=$(free -k | grep -E '(Mem|Speicher):' | awk '{print $4;}')
|
||||||
# http://superuser.com/questions/220059/what-parameters-has-ulimit
|
# http://superuser.com/questions/220059/what-parameters-has-ulimit
|
||||||
ulimit -d $(expr $freeMem / 2) 2>/dev/null # maximum heap size (kB)
|
ulimit -d unlimited 2>/dev/null \
|
||||||
ulimit -s $(expr $freeMem / $DAMASK_NUM_THREADS / 2) 2>/dev/null # maximum stack size (kB)
|
|| ulimit -d $(expr $freeMem / 2) 2>/dev/null # maximum heap size (kB)
|
||||||
|
ulimit -s unlimited 2>/dev/null \
|
||||||
|
|| echo "cannot unlimit stack..." \
|
||||||
|
&& ulimit -s $(expr $freeMem / $DAMASK_NUM_THREADS / 2) 2>/dev/null # maximum stack size (kB)
|
||||||
fi
|
fi
|
||||||
ulimit -v unlimited 2>/dev/null # maximum virtual memory size
|
ulimit -v unlimited 2>/dev/null # maximum virtual memory size
|
||||||
ulimit -m unlimited 2>/dev/null # maximum physical memory size
|
ulimit -m unlimited 2>/dev/null # maximum physical memory size
|
||||||
|
|
|
||||||
|
|
@ -19,8 +19,8 @@ if [[ ( "x$DAMASK_BIN" != "x" ) && ( "x$MATCH" = "x" ) ]]; then
|
||||||
export PATH=$DAMASK_BIN:$PATH
|
export PATH=$DAMASK_BIN:$PATH
|
||||||
fi
|
fi
|
||||||
|
|
||||||
SOLVER=`which DAMASK_spectral 2>/dev/null`
|
SOLVER=`which DAMASK_spectral || True 2>/dev/null`
|
||||||
PROCESSING=`which postResults 2>/dev/null`
|
PROCESSING=`which postResults || True 2>/dev/null`
|
||||||
if [ "x$DAMASK_NUM_THREADS" = "x" ]; then
|
if [ "x$DAMASK_NUM_THREADS" = "x" ]; then
|
||||||
DAMASK_NUM_THREADS=1
|
DAMASK_NUM_THREADS=1
|
||||||
fi
|
fi
|
||||||
|
|
|
||||||
|
|
@ -3,30 +3,36 @@ SHELL = /bin/sh
|
||||||
# Makefile for the installation of DAMASK
|
# Makefile for the installation of DAMASK
|
||||||
########################################################################################
|
########################################################################################
|
||||||
.PHONY: all
|
.PHONY: all
|
||||||
all: spectral marc processing
|
all: spectral FEM marc processing
|
||||||
|
|
||||||
.PHONY: spectral
|
.PHONY: spectral
|
||||||
spectral:
|
spectral: build/spectral
|
||||||
$(MAKE) DAMASK_spectral.exe -C code
|
@(cd build/spectral;make --no-print-directory -ws all install VERBOSE=1;)
|
||||||
|
|
||||||
.PHONY: FEM
|
.PHONY: FEM
|
||||||
FEM:
|
FEM: build/FEM
|
||||||
$(MAKE) DAMASK_FEM.exe -C code
|
@(cd build/FEM; make --no-print-directory -ws all install;)
|
||||||
|
|
||||||
|
.PHONY: build/spectral
|
||||||
|
build/spectral:
|
||||||
|
@mkdir -p build/spectral
|
||||||
|
@(cd build/spectral; cmake -Wno-dev -DDAMASK_SOLVER=SPECTRAL -DCMAKE_BUILD_TYPE=${BUILD_TYPE} -DBUILDCMD_POST=${BUILDCMD_POST} -DBUILDCMD_PRE=${BUILDCMD_PRE} -DOPTIMIZATION=${OPTIMIZATION} -DOPENMP=${OPENMP} ../../;)
|
||||||
|
|
||||||
|
.PHONY: build/FEM
|
||||||
|
build/FEM:
|
||||||
|
@mkdir -p build/FEM
|
||||||
|
@(cd build/FEM; cmake -Wno-dev -DDAMASK_SOLVER=FEM -DCMAKE_BUILD_TYPE=${BUILD_TYPE} -DBUILDCMD_POST=${BUILDCMD_POST} -DBUILDCMD_PRE=${BUILDCMD_PRE} -DOPTIMIZATION=${OPTIMIZATION} -DOPENMP=${OPENMP} ../../;)
|
||||||
|
|
||||||
.PHONY: marc
|
.PHONY: marc
|
||||||
marc:
|
marc:
|
||||||
|
@./installation/symLink_Code.sh
|
||||||
@./installation/mods_MarcMentat/apply_DAMASK_modifications.sh ${MAKEFLAGS}
|
@./installation/mods_MarcMentat/apply_DAMASK_modifications.sh ${MAKEFLAGS}
|
||||||
|
|
||||||
.PHONY: tidy
|
|
||||||
tidy:
|
|
||||||
@$(MAKE) tidy -C code >/dev/null
|
|
||||||
|
|
||||||
.PHONY: clean
|
.PHONY: clean
|
||||||
clean:
|
clean:
|
||||||
@$(MAKE) cleanDAMASK -C code >/dev/null
|
@rm -rf build
|
||||||
|
|
||||||
.PHONY: install
|
.PHONY: processing
|
||||||
install:
|
processing:
|
||||||
@./installation/symlink_Code.py ${MAKEFLAGS}
|
|
||||||
@./installation/symlink_Processing.py ${MAKEFLAGS}
|
@./installation/symlink_Processing.py ${MAKEFLAGS}
|
||||||
|
|
||||||
|
|
|
||||||
2
README
2
README
|
|
@ -8,4 +8,4 @@ Max-Planck-Str. 1
|
||||||
Germany
|
Germany
|
||||||
|
|
||||||
Email: DAMASK@mpie.de
|
Email: DAMASK@mpie.de
|
||||||
http://damask.mpie.de
|
https://damask.mpie.de
|
||||||
|
|
|
||||||
|
|
@ -1,8 +0,0 @@
|
||||||
# from https://help.github.com/articles/dealing-with-line-endings/
|
|
||||||
#
|
|
||||||
# always use LF, even if the files are edited on windows, they need to be compiled/used on unix
|
|
||||||
* text eol=lf
|
|
||||||
|
|
||||||
# Denote all files that are truly binary and should not be modified.
|
|
||||||
*.png binary
|
|
||||||
*.jpg binary
|
|
||||||
740
code/Makefile
740
code/Makefile
|
|
@ -1,740 +0,0 @@
|
||||||
SHELL = /bin/sh
|
|
||||||
########################################################################################
|
|
||||||
# Makefile to compile the Material subroutine for BVP solution using spectral method
|
|
||||||
########################################################################################
|
|
||||||
# Be sure to remove all files compiled with different options by using "make clean"
|
|
||||||
########################################################################################
|
|
||||||
# OPTIONS = standard (alternative): meaning
|
|
||||||
#-------------------------------------------------------------
|
|
||||||
# F90 = ifort (gfortran): compiler type, choose Intel or GNU
|
|
||||||
# FCOMPILERNAME = name of the compiler executable (if not the same as the type), e.g. using mpich-g90 instead of ifort
|
|
||||||
# PORTABLE = TRUE (FALSE): decision, if executable is optimized for the machine on which it was built.
|
|
||||||
# OPTIMIZATION = DEFENSIVE (OFF,AGGRESSIVE,ULTRA): Optimization mode: O2, O0, O3 + further options for most files, O3 + further options for all files
|
|
||||||
# OPENMP = TRUE (FALSE): OpenMP multiprocessor support
|
|
||||||
# PREFIX = arbitrary prefix (before FCOMPILERNAME)
|
|
||||||
# OPTION = arbitrary option (just before file to compile)
|
|
||||||
# SUFFIX = arbitrary suffix (after file to compile)
|
|
||||||
# STANDARD_CHECK = checking for Fortran 2008, compiler dependend
|
|
||||||
########################################################################################
|
|
||||||
# including PETSc files. PETSC_ARCH is loaded from these files.
|
|
||||||
DAMASKVERSION :=$(shell cat ../VERSION)
|
|
||||||
|
|
||||||
include ${PETSC_DIR}/lib/petsc/conf/variables
|
|
||||||
include ${PETSC_DIR}/lib/petsc/conf/rules
|
|
||||||
|
|
||||||
INCLUDE_DIRS := $(PETSC_FC_INCLUDES) -DPETSc
|
|
||||||
LIBRARIES := $(PETSC_WITH_EXTERNAL_LIB)
|
|
||||||
FCOMPILERNAME ?= $(FC)
|
|
||||||
CCOMPILERNAME ?= $(CC)
|
|
||||||
LINKERNAME ?= $(FLINKER)
|
|
||||||
|
|
||||||
# MPI compiler wrappers will tell if they are pointing to ifort or gfortran
|
|
||||||
COMPILEROUT :=$(shell $(FC) -show)
|
|
||||||
# search in FC or COMPILEROUT for gfortran/ifort if not defined
|
|
||||||
ifeq ($(strip $(F90)),)
|
|
||||||
F90 :=$(findstring gfortran,$(FC) $(COMPILEROUT))
|
|
||||||
endif
|
|
||||||
ifeq ($(strip $(F90)),)
|
|
||||||
F90 :=$(findstring ifort,$(FC) $(COMPILEROUT))
|
|
||||||
endif
|
|
||||||
|
|
||||||
OPENMP ?= ON
|
|
||||||
OPTIMIZATION ?= DEFENSIVE
|
|
||||||
|
|
||||||
ifeq "$(OPTIMIZATION)" "OFF"
|
|
||||||
OPTI := OFF
|
|
||||||
MAXOPTI := OFF
|
|
||||||
endif
|
|
||||||
ifeq "$(OPTIMIZATION)" "DEFENSIVE"
|
|
||||||
OPTI := DEFENSIVE
|
|
||||||
MAXOPTI := DEFENSIVE
|
|
||||||
endif
|
|
||||||
ifeq "$(OPTIMIZATION)" "AGGRESSIVE"
|
|
||||||
OPTI := AGGRESSIVE
|
|
||||||
MAXOPTI := AGGRESSIVE
|
|
||||||
endif
|
|
||||||
ifeq "$(OPTIMIZATION)" "ULTRA"
|
|
||||||
OPTI := AGGRESSIVE
|
|
||||||
MAXOPTI := AGGRESSIVE
|
|
||||||
endif
|
|
||||||
|
|
||||||
ifndef OPTI
|
|
||||||
OPTI := DEFENSIVE
|
|
||||||
MAXOPTI := DEFENSIVE
|
|
||||||
endif
|
|
||||||
|
|
||||||
# settings for shared memory multicore support
|
|
||||||
ifeq "$(OPENMP)" "ON"
|
|
||||||
OPENMP_FLAG_ifort =-qopenmp -parallel
|
|
||||||
OPENMP_FLAG_gfortran =-fopenmp
|
|
||||||
endif
|
|
||||||
|
|
||||||
ifdef STANDARD_CHECK
|
|
||||||
STANDARD_CHECK_ifort =$(STANDARD_CHECK)
|
|
||||||
STANDARD_CHECK_gfortran =$(STANDARD_CHECK)
|
|
||||||
endif
|
|
||||||
|
|
||||||
STANDARD_CHECK_ifort ?=-stand f08 -standard-semantics
|
|
||||||
STANDARD_CHECK_gfortran ?=-std=f2008ts -pedantic-errors
|
|
||||||
|
|
||||||
#-pedantic: more strict on standard, enables some warnings
|
|
||||||
# -pedantic-errors: like pedantic, but errors instead of warnings
|
|
||||||
OPTIMIZATION_OFF_ifort :=-O0 -no-ip
|
|
||||||
OPTIMIZATION_OFF_gfortran :=-O0
|
|
||||||
OPTIMIZATION_DEFENSIVE_ifort :=-O2
|
|
||||||
OPTIMIZATION_DEFENSIVE_gfortran :=-O2
|
|
||||||
OPTIMIZATION_AGGRESSIVE_ifort :=-ipo -O3 -no-prec-div -fp-model fast=2 -xHost #-fast = -ipo, -O3, -no-prec-div, -static, -fp-model fast=2, and -xHost
|
|
||||||
OPTIMIZATION_AGGRESSIVE_gfortran :=-O3 -ffast-math -funroll-loops -ftree-vectorize
|
|
||||||
|
|
||||||
|
|
||||||
LINK_OPTIONS_ifort :=-shared-intel
|
|
||||||
COMPILE_OPTIONS_ifort :=-DDAMASKVERSION=\"${DAMASKVERSION}\"\
|
|
||||||
-fpp\
|
|
||||||
-ftz\
|
|
||||||
-assume byterecl,fpe_summary\
|
|
||||||
-diag-disable 5268\
|
|
||||||
-warn declarations\
|
|
||||||
-warn general\
|
|
||||||
-warn usage\
|
|
||||||
-warn interfaces\
|
|
||||||
-warn ignore_loc\
|
|
||||||
-warn alignments\
|
|
||||||
-warn unused
|
|
||||||
|
|
||||||
###################################################################################################
|
|
||||||
#COMPILE SWITCHES
|
|
||||||
#-shared-intel: Link against shared Intel libraries instead of static ones
|
|
||||||
#-fpp: preprocessor
|
|
||||||
#-ftz: flush unterflow to zero, automatically set if O<0,1,2,3> >0
|
|
||||||
#-assume byterecl record length is given in bytes (also set by -standard-semantics)
|
|
||||||
# fpe_summary print list of floating point exceptions occured during execution
|
|
||||||
#-fimplicit-none: assume "implicit-none" even if not present in source
|
|
||||||
#-diag-disable: disables warnings, where
|
|
||||||
# warning ID 5268: the text exceeds right hand column allowed on the line (we have only comments there)
|
|
||||||
#-warn: enables warnings, where
|
|
||||||
# declarations: any undeclared names (alternative name: -implicitnone)
|
|
||||||
# general: warning messages and informational messages are issued by the compiler
|
|
||||||
# usage: questionable programming practices
|
|
||||||
# interfaces: checks the interfaces of all SUBROUTINEs called and FUNCTIONs invoked in your compilation against an external set of interface blocks
|
|
||||||
# ignore_loc: %LOC is stripped from an actual argument
|
|
||||||
# alignments: data that is not naturally aligned
|
|
||||||
# unused: declared variables that are never used
|
|
||||||
# stderrors: warnings about Fortran standard violations are changed to errors (STANDARD_CHECK)
|
|
||||||
#
|
|
||||||
###################################################################################################
|
|
||||||
#MORE OPTIONS FOR DEBUGGING DURING COMPILATION
|
|
||||||
#-warn: enables warnings, where
|
|
||||||
# truncated_source: Determines whether warnings occur when source exceeds the maximum column width in fixed-format files. (too many warnings because we have comments beyond character 132)
|
|
||||||
# uncalled: Determines whether warnings occur when a statement function is never called
|
|
||||||
# all:
|
|
||||||
# -name as_is: case sensitive Fortran!
|
|
||||||
|
|
||||||
DEBUG_OPTIONS_ifort :=-g\
|
|
||||||
-traceback\
|
|
||||||
-gen-interfaces\
|
|
||||||
-fp-stack-check\
|
|
||||||
-fp-model strict\
|
|
||||||
-check bounds,format,output_conversion,pointers,uninit\
|
|
||||||
-ftrapuv\
|
|
||||||
-fpe-all0\
|
|
||||||
-warn errors\
|
|
||||||
-warn stderrors\
|
|
||||||
-debug-parameters all
|
|
||||||
|
|
||||||
###################################################################################################
|
|
||||||
#COMPILE SWITCHES FOR RUNTIME DEBUGGING
|
|
||||||
#-g: Generate symbolic debugging information in the object file
|
|
||||||
#-traceback: Generate extra information in the object file to provide source file traceback information when a severe error occurs at run time.
|
|
||||||
#-gen-interfaces: Generate an interface block for each routine. http://software.intel.com/en-us/blogs/2012/01/05/doctor-fortran-gets-explicit-again/
|
|
||||||
#-fp-stack-check: Generate extra code after every function call to ensure that the floating-point (FP) stack is in the expected state.
|
|
||||||
#-ftrapuv Trap uninitalized variables
|
|
||||||
#-check: checks at runtime, where
|
|
||||||
# bounds: check if an array index is too small (<1) or too large!
|
|
||||||
# format: Checking for the data type of an item being formatted for output.
|
|
||||||
# output_conversion: Checking for the fit of data items within a designated format descriptor field.
|
|
||||||
# pointers: Checking for certain disassociated or uninitialized pointers or unallocated allocatable objects.
|
|
||||||
# uninit: Checking for uninitialized variables.
|
|
||||||
#-fpe-all0 capture all floating-point exceptions, sets -ftz automatically
|
|
||||||
#-warn: enables warnings, where
|
|
||||||
# errors: warnings are changed to errors
|
|
||||||
# stderrors: warnings about Fortran standard violations are changed to errors
|
|
||||||
# information on http://software.intel.com/en-us/articles/determining-root-cause-of-sigsegv-or-sigbus-errors/
|
|
||||||
###################################################################################################
|
|
||||||
#MORE OPTIONS FOR RUNTIME DEBUGGING
|
|
||||||
#-heap-arrays: should not be done for OpenMP, but set "ulimit -s unlimited" on shell. Probably it helps also to unlimit other limits
|
|
||||||
#-check: checks at runtime, where
|
|
||||||
# arg_temp_created: will cause a lot of warnings because we create a bunch of temporary arrays (performance?)
|
|
||||||
# stack:
|
|
||||||
LINK_OPTIONS_gfortran :=-Wl,-undefined,dynamic_lookup
|
|
||||||
COMPILE_OPTIONS_gfortran :=-DDAMASKVERSION=\"${DAMASKVERSION}\"\
|
|
||||||
-xf95-cpp-input\
|
|
||||||
-ffree-line-length-132\
|
|
||||||
-fimplicit-none\
|
|
||||||
-fmodule-private\
|
|
||||||
-Wall\
|
|
||||||
-Wextra\
|
|
||||||
-Wcharacter-truncation\
|
|
||||||
-Wunderflow\
|
|
||||||
-Wsuggest-attribute=pure\
|
|
||||||
-Wsuggest-attribute=noreturn\
|
|
||||||
-Wconversion-extra\
|
|
||||||
-Wimplicit-procedure\
|
|
||||||
-Wno-unused-parameter
|
|
||||||
#-ffpe-summary=all only for newer gfortran
|
|
||||||
###################################################################################################
|
|
||||||
#COMPILE SWITCHES
|
|
||||||
#-shared
|
|
||||||
#-Wl,-undefined,dynamic_lookup:ensure to link against dynamic libraries
|
|
||||||
#-xf95-cpp-input: preprocessor
|
|
||||||
#-ffree-line-length-132: restrict line length to the standard 132 characters
|
|
||||||
#-ffpe-summary: print summary of floating point exeptions (‘invalid’, ‘zero’, ‘overflow’, ‘underflow’, ‘inexact’ and ‘denormal’)
|
|
||||||
#-fimplicit-none: assume "implicit-none" even if not present in source
|
|
||||||
#-fmodule-private: assume "private" even if not present in source
|
|
||||||
#-Wcharacter-truncation: warn if character expressions (strings) are truncated
|
|
||||||
#-Wunderflow: produce a warning when numerical constant expressions are encountered, which yield an UNDERFLOW during compilation
|
|
||||||
#-Wsuggest-attribute=pure:
|
|
||||||
#-Wsuggest-attribute=noreturn:
|
|
||||||
#-Wconversion-extra
|
|
||||||
#-Wimplicit-procedure
|
|
||||||
#-Wall: sets the following Fortran options:
|
|
||||||
# -Waliasing: warn about possible aliasing of dummy arguments. Specifically, it warns if the same actual argument is associated with a dummy argument with "INTENT(IN)" and a dummy argument with "INTENT(OUT)" in a call with an explicit interface.
|
|
||||||
# -Wampersand: checks if a character expression is continued proberly by an ampersand at the end of the line and at the beginning of the new line
|
|
||||||
# -Warray-bounds: checks if array reference is out of bounds at compile time. use -fcheck-bounds to also check during runtime
|
|
||||||
# -Wconversion: warn about implicit conversions between different type
|
|
||||||
# -Wsurprising: warn when "suspicious" code constructs are encountered. While technically legal these usually indicate that an error has been made.
|
|
||||||
# -Wc-binding-type:
|
|
||||||
# -Wintrinsics-std: only standard intrisics are available, e.g. "call flush(6)" will cause an error
|
|
||||||
# -Wno-tabs: do not allow tabs in source
|
|
||||||
# -Wintrinsic-shadow: warn if a user-defined procedure or module procedure has the same name as an intrinsic
|
|
||||||
# -Wline-truncation:
|
|
||||||
# -Wtarget-lifetime:
|
|
||||||
# -Wreal-q-constant: warn about real-literal-constants with 'q' exponent-letter
|
|
||||||
# -Wunused: a number of unused-xxx warnings
|
|
||||||
# these are general (non -Fortran options) implied by -Wall
|
|
||||||
# -Waddress
|
|
||||||
# -Warray-bounds (only with -O2)
|
|
||||||
# -Wc++11-compat
|
|
||||||
# -Wchar-subscripts
|
|
||||||
# -Wcomment
|
|
||||||
# -Wformat
|
|
||||||
# -Wmaybe-uninitialized
|
|
||||||
# -Wnonnull
|
|
||||||
# -Wparentheses
|
|
||||||
# -Wpointer-sign
|
|
||||||
# -Wreorder
|
|
||||||
# -Wreturn-type
|
|
||||||
# -Wsequence-point
|
|
||||||
# -Wstrict-aliasing
|
|
||||||
# -Wstrict-overflow=1
|
|
||||||
# -Wswitch
|
|
||||||
# -Wtrigraphs
|
|
||||||
# -Wuninitialized
|
|
||||||
# -Wunknown-pragmas
|
|
||||||
# -Wunused-function
|
|
||||||
# -Wunused-label
|
|
||||||
# -Wunused-value
|
|
||||||
# -Wunused-variable
|
|
||||||
# -Wvolatile-register-var
|
|
||||||
#-Wextra: sets the following Fortran options:
|
|
||||||
# -Wunuses-parameter:
|
|
||||||
# -Wcompare-reals:
|
|
||||||
# these are general (non -Fortran options) implied by -Wextra
|
|
||||||
# -Wclobbered
|
|
||||||
# -Wempty-body
|
|
||||||
# -Wignored-qualifiers
|
|
||||||
# -Wmissing-field-initializers
|
|
||||||
# -Woverride-init
|
|
||||||
# -Wsign-compare
|
|
||||||
# -Wtype-limits
|
|
||||||
# -Wuninitialized
|
|
||||||
# -Wunused-but-set-parameter (only with -Wunused or -Wall)
|
|
||||||
# -Wno-globals
|
|
||||||
|
|
||||||
###################################################################################################
|
|
||||||
#MORE OPTIONS FOR DEBUGGING DURING COMPILATION
|
|
||||||
#-Warray-temporarieswarnings: because we have many temporary arrays (performance issue?):
|
|
||||||
#-Wimplicit-interface: no interfaces for lapack routines
|
|
||||||
#-Wunsafe-loop-optimizations: warn if the loop cannot be optimized due to nontrivial assumptions.
|
|
||||||
#-Wstrict-overflow:
|
|
||||||
|
|
||||||
DEBUG_OPTIONS_gfortran :=-g \
|
|
||||||
-fbacktrace \
|
|
||||||
-fdump-core \
|
|
||||||
-fcheck=all \
|
|
||||||
-ffpe-trap=invalid,zero,overflow
|
|
||||||
|
|
||||||
###################################################################################################
|
|
||||||
#COMPILE SWITCHES FOR RUNTIME DEBUGGING
|
|
||||||
#-ffpe-trap=invalid,\ stop execution if floating point exception is detected (NaN is silent)
|
|
||||||
# zero,\
|
|
||||||
# overflow
|
|
||||||
#-fcheck=all: sets the following Fortran options:
|
|
||||||
#array-temps
|
|
||||||
#bounds
|
|
||||||
#do
|
|
||||||
#mem
|
|
||||||
#pointer
|
|
||||||
#recursion
|
|
||||||
###################################################################################################
|
|
||||||
#MORE OPTIONS FOR RUNTIME DEBUGGING
|
|
||||||
#-ffpe-trap=precision,\
|
|
||||||
# denormal, \
|
|
||||||
# underflow
|
|
||||||
|
|
||||||
ifeq "$(DEBUG)" "ON"
|
|
||||||
COMPILE_OPTIONS_$(F90) +=$(DEBUG_OPTIONS_$(F90))
|
|
||||||
LINK_OPTIONS_$(F90) +=$(DEBUG_OPTIONS_$(F90))
|
|
||||||
endif
|
|
||||||
LINK_OPTIONS_$(F90) += $(OPTIMIZATION_$(MAXOPTI)_$(F90))
|
|
||||||
|
|
||||||
PRECISION_ifort :=-real-size 64 -integer-size 32 -DFLOAT=8 -DINT=4
|
|
||||||
#-real-size 32: set precision to one of those 32/64/128 (= 4/8/16 bytes) for standard real (=8 for pReal)
|
|
||||||
#-integer-size 16: set precision to one of those 16/32/64 (= 2/4/8 bytes) for standard integer (=4 for pInt)
|
|
||||||
PRECISION_gfortran :=-fdefault-real-8 -fdefault-double-8 -DFLOAT=8 -DINT=4
|
|
||||||
#-fdefault-real-8: set precision to 8 bytes for standard real (=8 for pReal). Will set size of double to 16 bytes as long as -fdefault-double-8 is not set
|
|
||||||
#-fdefault-double-8: set precision to 8 bytes for double real, would be 16 bytes because -fdefault-real-8 is used
|
|
||||||
#-fdefault-integer-8: Use it to set precision to 8 bytes for integer, don't use it for the standard case of pInt=4 (there is no -fdefault-integer-4)
|
|
||||||
|
|
||||||
###################################################################################################
|
|
||||||
COMPILE =$(OPENMP_FLAG_$(F90)) $(STANDARD_CHECK_$(F90)) $(OPTIMIZATION_$(OPTI)_$(F90)) $(COMPILE_OPTIONS_$(F90)) $(INCLUDE_DIRS) $(PRECISION_$(F90))
|
|
||||||
COMPILE_MAXOPTI =$(OPENMP_FLAG_$(F90)) $(STANDARD_CHECK_$(F90)) $(OPTIMIZATION_$(MAXOPTI)_$(F90)) $(COMPILE_OPTIONS_$(F90)) $(INCLUDE_DIRS) $(PRECISION_$(F90))
|
|
||||||
###################################################################################################
|
|
||||||
SOURCE_FILES = \
|
|
||||||
source_thermal_dissipation.o \
|
|
||||||
source_thermal_externalheat.o \
|
|
||||||
source_damage_isoBrittle.o \
|
|
||||||
source_damage_isoDuctile.o \
|
|
||||||
source_damage_anisoBrittle.o \
|
|
||||||
source_damage_anisoDuctile.o \
|
|
||||||
source_vacancy_phenoplasticity.o \
|
|
||||||
source_vacancy_irradiation.o \
|
|
||||||
source_vacancy_thermalfluc.o
|
|
||||||
|
|
||||||
KINEMATICS_FILES = \
|
|
||||||
kinematics_cleavage_opening.o \
|
|
||||||
kinematics_slipplane_opening.o \
|
|
||||||
kinematics_thermal_expansion.o \
|
|
||||||
kinematics_vacancy_strain.o \
|
|
||||||
kinematics_hydrogen_strain.o
|
|
||||||
|
|
||||||
PLASTIC_FILES = \
|
|
||||||
plastic_dislotwin.o \
|
|
||||||
plastic_disloUCLA.o \
|
|
||||||
plastic_isotropic.o \
|
|
||||||
plastic_phenopowerlaw.o \
|
|
||||||
plastic_titanmod.o \
|
|
||||||
plastic_nonlocal.o \
|
|
||||||
plastic_none.o \
|
|
||||||
plastic_phenoplus.o
|
|
||||||
|
|
||||||
THERMAL_FILES = \
|
|
||||||
thermal_isothermal.o \
|
|
||||||
thermal_adiabatic.o \
|
|
||||||
thermal_conduction.o
|
|
||||||
|
|
||||||
DAMAGE_FILES = \
|
|
||||||
damage_none.o \
|
|
||||||
damage_local.o \
|
|
||||||
damage_nonlocal.o
|
|
||||||
|
|
||||||
VACANCYFLUX_FILES = \
|
|
||||||
vacancyflux_isoconc.o \
|
|
||||||
vacancyflux_isochempot.o \
|
|
||||||
vacancyflux_cahnhilliard.o
|
|
||||||
|
|
||||||
POROSITY_FILES = \
|
|
||||||
porosity_none.o \
|
|
||||||
porosity_phasefield.o
|
|
||||||
|
|
||||||
HYDROGENFLUX_FILES = \
|
|
||||||
hydrogenflux_isoconc.o \
|
|
||||||
hydrogenflux_cahnhilliard.o
|
|
||||||
|
|
||||||
HOMOGENIZATION_FILES = \
|
|
||||||
homogenization_RGC.o \
|
|
||||||
homogenization_isostrain.o \
|
|
||||||
homogenization_none.o
|
|
||||||
|
|
||||||
#####################
|
|
||||||
# Spectral Solver
|
|
||||||
#####################
|
|
||||||
DAMASK_spectral.exe: IGNORE := \#
|
|
||||||
DAMASK_spectral.exe: COMPILE += -DSpectral
|
|
||||||
DAMASK_spectral.exe: COMPILE_MAXOPTI += -DSpectral
|
|
||||||
DAMASK_spectral.exe: MESHNAME := mesh.f90
|
|
||||||
DAMASK_spectral.exe: INTERFACENAME := spectral_interface.f90
|
|
||||||
|
|
||||||
DAMASK_spectral.o: IGNORE := \#
|
|
||||||
DAMASK_spectral.o: COMPILE += -DSpectral
|
|
||||||
DAMASK_spectral.o: COMPILE_MAXOPTI += -DSpectral
|
|
||||||
DAMASK_spectral.o: MESHNAME := mesh.f90
|
|
||||||
DAMASK_spectral.o: INTERFACENAME := spectral_interface.f90
|
|
||||||
|
|
||||||
|
|
||||||
SPECTRAL_SOLVER_FILES = spectral_mech_AL.o spectral_mech_Basic.o spectral_mech_Polarisation.o \
|
|
||||||
spectral_thermal.o spectral_damage.o
|
|
||||||
|
|
||||||
SPECTRAL_FILES = C_routines.o \
|
|
||||||
system_routines.o \
|
|
||||||
prec.o \
|
|
||||||
DAMASK_interface.o \
|
|
||||||
IO.o \
|
|
||||||
numerics.o \
|
|
||||||
debug.o \
|
|
||||||
math.o \
|
|
||||||
FEsolving.o \
|
|
||||||
mesh.o \
|
|
||||||
material.o \
|
|
||||||
lattice.o \
|
|
||||||
$(SOURCE_FILES) \
|
|
||||||
$(KINEMATICS_FILES) \
|
|
||||||
$(PLASTIC_FILES) \
|
|
||||||
constitutive.o \
|
|
||||||
crystallite.o \
|
|
||||||
$(THERMAL_FILES) \
|
|
||||||
$(DAMAGE_FILES) \
|
|
||||||
$(VACANCYFLUX_FILES) \
|
|
||||||
$(HYDROGENFLUX_FILES) \
|
|
||||||
$(POROSITY_FILES) \
|
|
||||||
$(HOMOGENIZATION_FILES) homogenization.o \
|
|
||||||
CPFEM2.o \
|
|
||||||
spectral_utilities.o \
|
|
||||||
$(SPECTRAL_SOLVER_FILES)
|
|
||||||
|
|
||||||
DAMASK_spectral.exe: DAMASK_spectral.o
|
|
||||||
$(PREFIX) $(LINKERNAME) $(OPENMP_FLAG_$(F90)) $(LINK_OPTIONS_$(F90)) $(STANDARD_CHECK_$(F90)) $(OPTIMIZATION_$(MAXOPTI)_$(F90)) \
|
|
||||||
-o DAMASK_spectral.exe DAMASK_spectral.o \
|
|
||||||
$(SPECTRAL_FILES) $(LIBRARIES) $(SUFFIX)
|
|
||||||
|
|
||||||
|
|
||||||
DAMASK_spectral.o: DAMASK_spectral.f90 \
|
|
||||||
$(SPECTRAL_SOLVER_FILES)
|
|
||||||
$(PREFIX) $(FCOMPILERNAME) $(COMPILE_MAXOPTI) -c DAMASK_spectral.f90 $(SUFFIX)
|
|
||||||
|
|
||||||
spectral_mech_AL.o: spectral_mech_AL.f90 \
|
|
||||||
spectral_utilities.o
|
|
||||||
|
|
||||||
spectral_mech_Polarisation.o: spectral_mech_Polarisation.f90 \
|
|
||||||
spectral_utilities.o
|
|
||||||
|
|
||||||
spectral_mech_Basic.o: spectral_mech_Basic.f90 \
|
|
||||||
spectral_utilities.o
|
|
||||||
|
|
||||||
spectral_thermal.o: spectral_thermal.f90 \
|
|
||||||
spectral_utilities.o
|
|
||||||
|
|
||||||
spectral_damage.o: spectral_damage.f90 \
|
|
||||||
spectral_utilities.o
|
|
||||||
|
|
||||||
spectral_utilities.o: spectral_utilities.f90 \
|
|
||||||
CPFEM2.o
|
|
||||||
|
|
||||||
#####################
|
|
||||||
# FEM Solver
|
|
||||||
#####################
|
|
||||||
VPATH := ../private/FEM/code
|
|
||||||
DAMASK_FEM.exe: COMPILE += -DFEM
|
|
||||||
DAMASK_FEM.exe: COMPILE_MAXOPTI += -DFEM
|
|
||||||
DAMASK_FEM.exe: MESHNAME := ../private/FEM/code/meshFEM.f90
|
|
||||||
DAMASK_FEM.exe: INTERFACENAME := ../private/FEM/code/DAMASK_FEM_interface.f90
|
|
||||||
DAMASK_FEM.exe: INCLUDE_DIRS += -I./
|
|
||||||
|
|
||||||
FEM_SOLVER_FILES = FEM_mech.o FEM_thermal.o FEM_damage.o FEM_vacancyflux.o FEM_porosity.o FEM_hydrogenflux.o
|
|
||||||
|
|
||||||
FEM_FILES = prec.o \
|
|
||||||
DAMASK_interface.o \
|
|
||||||
FEZoo.o \
|
|
||||||
IO.o \
|
|
||||||
numerics.o \
|
|
||||||
debug.o \
|
|
||||||
math.o \
|
|
||||||
FEsolving.o \
|
|
||||||
mesh.o \
|
|
||||||
material.o \
|
|
||||||
lattice.o \
|
|
||||||
$(SOURCE_FILES) \
|
|
||||||
$(KINEMATICS_FILES) \
|
|
||||||
$(PLASTIC_FILES) \
|
|
||||||
constitutive.o \
|
|
||||||
crystallite.o \
|
|
||||||
$(THERMAL_FILES) \
|
|
||||||
$(DAMAGE_FILES) \
|
|
||||||
$(VACANCYFLUX_FILES) \
|
|
||||||
$(HYDROGENFLUX_FILES) \
|
|
||||||
$(POROSITY_FILES) \
|
|
||||||
$(HOMOGENIZATION_FILES) homogenization.o \
|
|
||||||
CPFEM.o \
|
|
||||||
FEM_utilities.o \
|
|
||||||
$(FEM_SOLVER_FILES)
|
|
||||||
|
|
||||||
DAMASK_FEM.exe: DAMASK_FEM_driver.o
|
|
||||||
$(PREFIX) $(LINKERNAME) $(OPENMP_FLAG_$(F90)) $(LINK_OPTIONS_$(F90)) $(STANDARD_CHECK_$(F90)) $(OPTIMIZATION_$(MAXOPTI)_$(F90)) \
|
|
||||||
-o DAMASK_FEM.exe DAMASK_FEM_driver.o \
|
|
||||||
$(FEM_FILES) $(LIBRARIES) $(SUFFIX)
|
|
||||||
|
|
||||||
DAMASK_FEM_driver.o: DAMASK_FEM_driver.f90 $(FEM_SOLVER_FILES)
|
|
||||||
$(PREFIX) $(FCOMPILERNAME) $(COMPILE_MAXOPTI) -c ../private/FEM/code/DAMASK_FEM_driver.f90 $(SUFFIX)
|
|
||||||
|
|
||||||
FEM_mech.o: FEM_mech.f90 \
|
|
||||||
FEM_utilities.o
|
|
||||||
|
|
||||||
FEM_thermal.o: FEM_thermal.f90 \
|
|
||||||
FEM_utilities.o
|
|
||||||
|
|
||||||
FEM_damage.o: FEM_damage.f90 \
|
|
||||||
FEM_utilities.o
|
|
||||||
|
|
||||||
FEM_vacancyflux.o: FEM_vacancyflux.f90 \
|
|
||||||
FEM_utilities.o
|
|
||||||
|
|
||||||
FEM_porosity.o: FEM_porosity.f90 \
|
|
||||||
FEM_utilities.o
|
|
||||||
|
|
||||||
FEM_hydrogenflux.o: FEM_hydrogenflux.f90 \
|
|
||||||
FEM_utilities.o
|
|
||||||
|
|
||||||
FEM_utilities.o: FEM_utilities.f90 \
|
|
||||||
CPFEM.o
|
|
||||||
|
|
||||||
FEZoo.o: $(wildcard FEZoo.f90) \
|
|
||||||
IO.o
|
|
||||||
$(IGNORE) $(PREFIX) $(FCOMPILERNAME) $(COMPILE) -c ../private/FEM/code/FEZoo.f90 $(SUFFIX)
|
|
||||||
touch FEZoo.o
|
|
||||||
|
|
||||||
CPFEM.o: CPFEM.f90 \
|
|
||||||
homogenization.o
|
|
||||||
|
|
||||||
CPFEM2.o: CPFEM2.f90 \
|
|
||||||
homogenization.o
|
|
||||||
|
|
||||||
homogenization.o: homogenization.f90 \
|
|
||||||
$(THERMAL_FILES) \
|
|
||||||
$(DAMAGE_FILES) \
|
|
||||||
$(VACANCYFLUX_FILES) \
|
|
||||||
$(POROSITY_FILES) \
|
|
||||||
$(HYDROGENFLUX_FILES) \
|
|
||||||
$(HOMOGENIZATION_FILES)
|
|
||||||
|
|
||||||
thermal_isothermal.o: thermal_isothermal.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
thermal_adiabatic.o: thermal_adiabatic.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
thermal_conduction.o: thermal_conduction.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
damage_none.o: damage_none.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
damage_local.o: damage_local.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
damage_nonlocal.o: damage_nonlocal.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
thermal_conduction.o: thermal_conduction.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
vacancyflux_isoconc.o: vacancyflux_isoconc.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
vacancyflux_isochempot.o: vacancyflux_isochempot.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
vacancyflux_cahnhilliard.o: vacancyflux_cahnhilliard.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
porosity_none.o: porosity_none.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
porosity_phasefield.o: porosity_phasefield.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
hydrogenflux_isoconc.o: hydrogenflux_isoconc.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
hydrogenflux_cahnhilliard.o: hydrogenflux_cahnhilliard.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
homogenization_RGC.o: homogenization_RGC.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
homogenization_isostrain.o: homogenization_isostrain.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
homogenization_none.o: homogenization_none.f90 \
|
|
||||||
crystallite.o
|
|
||||||
|
|
||||||
crystallite.o: crystallite.f90 \
|
|
||||||
constitutive.o
|
|
||||||
|
|
||||||
constitutive.o: constitutive.f90 \
|
|
||||||
$(SOURCE_FILES) \
|
|
||||||
$(KINEMATICS_FILES) \
|
|
||||||
$(PLASTIC_FILES)
|
|
||||||
|
|
||||||
source_thermal_dissipation.o: source_thermal_dissipation.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
source_thermal_externalheat.o: source_thermal_externalheat.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
source_damage_isoBrittle.o: source_damage_isoBrittle.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
source_damage_isoDuctile.o: source_damage_isoDuctile.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
source_damage_anisoBrittle.o: source_damage_anisoBrittle.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
source_damage_anisoDuctile.o: source_damage_anisoDuctile.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
source_vacancy_phenoplasticity.o: source_vacancy_phenoplasticity.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
source_vacancy_irradiation.o: source_vacancy_irradiation.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
source_vacancy_thermalfluc.o: source_vacancy_thermalfluc.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
kinematics_cleavage_opening.o: kinematics_cleavage_opening.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
kinematics_slipplane_opening.o: kinematics_slipplane_opening.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
kinematics_thermal_expansion.o: kinematics_thermal_expansion.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
kinematics_vacancy_strain.o: kinematics_vacancy_strain.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
kinematics_hydrogen_strain.o: kinematics_hydrogen_strain.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
plastic_nonlocal.o: plastic_nonlocal.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
plastic_titanmod.o: plastic_titanmod.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
plastic_disloUCLA.o: plastic_disloUCLA.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
plastic_dislotwin.o: plastic_dislotwin.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
plastic_phenopowerlaw.o: plastic_phenopowerlaw.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
plastic_phenoplus.o: plastic_phenoplus.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
plastic_isotropic.o: plastic_isotropic.f90 \
|
|
||||||
lattice.o
|
|
||||||
|
|
||||||
plastic_none.o: plastic_none.f90 \
|
|
||||||
lattice.o
|
|
||||||
ifeq "$(F90)" "gfortran"
|
|
||||||
lattice.o: lattice.f90 \
|
|
||||||
material.o
|
|
||||||
$(PREFIX) $(FCOMPILERNAME) $(COMPILE) -ffree-line-length-240 -c lattice.f90 $(SUFFIX)
|
|
||||||
# long lines for interaction matrix
|
|
||||||
else
|
|
||||||
lattice.o: lattice.f90 \
|
|
||||||
material.o
|
|
||||||
endif
|
|
||||||
|
|
||||||
material.o: material.f90 \
|
|
||||||
mesh.o
|
|
||||||
|
|
||||||
mesh.o: mesh.f90 \
|
|
||||||
$(wildcard meshFEM.f90) \
|
|
||||||
FEsolving.o \
|
|
||||||
math.o \
|
|
||||||
FEZoo.o
|
|
||||||
$(PREFIX) $(FCOMPILERNAME) $(COMPILE) -c $(MESHNAME) -o mesh.o $(SUFFIX)
|
|
||||||
|
|
||||||
FEsolving.o: FEsolving.f90 \
|
|
||||||
debug.o
|
|
||||||
|
|
||||||
math.o: math.f90 \
|
|
||||||
debug.o
|
|
||||||
|
|
||||||
debug.o: debug.f90 \
|
|
||||||
numerics.o
|
|
||||||
|
|
||||||
numerics.o: numerics.f90 \
|
|
||||||
IO.o
|
|
||||||
|
|
||||||
IO.o: IO.f90 \
|
|
||||||
DAMASK_interface.o
|
|
||||||
|
|
||||||
DAMASK_interface.o: spectral_interface.f90 \
|
|
||||||
$(wildcard DAMASK_FEM_interface.f90) \
|
|
||||||
prec.o
|
|
||||||
$(PREFIX) $(FCOMPILERNAME) $(COMPILE) -c $(INTERFACENAME) -o DAMASK_interface.o $(SUFFIX)
|
|
||||||
|
|
||||||
ifeq "$(F90)" "gfortran"
|
|
||||||
prec.o: prec.f90 \
|
|
||||||
system_routines.o
|
|
||||||
$(PREFIX) $(FCOMPILERNAME) $(COMPILE) -c prec.f90 -fno-range-check -fall-intrinsics -fno-fast-math $(SUFFIX)
|
|
||||||
# fno-range-check: Disable range checking on results of simplification of constant expressions during compilation
|
|
||||||
# --> allows the definition of DAMASK_NaN
|
|
||||||
#-fall-intrinsics: all intrinsic procedures (including the GNU-specific extensions) are accepted. -Wintrinsics-std will be ignored
|
|
||||||
# and no user-defined procedure with the same name as any intrinsic will be called except when it is explicitly declared external
|
|
||||||
# --> allows the use of 'isnan'
|
|
||||||
#-fno-fast-math:
|
|
||||||
# --> otherwise, when setting -ffast-math, isnan always evaluates to false (I would call it a bug)
|
|
||||||
else
|
|
||||||
|
|
||||||
prec.o: prec.f90 \
|
|
||||||
system_routines.o
|
|
||||||
endif
|
|
||||||
|
|
||||||
system_routines.o: system_routines.f90 \
|
|
||||||
C_routines.o
|
|
||||||
|
|
||||||
C_routines.o: C_routines.c
|
|
||||||
|
|
||||||
|
|
||||||
%.o : %.f90
|
|
||||||
$(PREFIX) $(FCOMPILERNAME) $(COMPILE) -c $< $(SUFFIX)
|
|
||||||
|
|
||||||
%.o : %.c
|
|
||||||
$(CCOMPILERNAME) -c $<
|
|
||||||
|
|
||||||
.PHONY: tidy
|
|
||||||
tidy:
|
|
||||||
@rm -rf *.o
|
|
||||||
@rm -rf *.mod
|
|
||||||
@rm -rf *.optrpt
|
|
||||||
@rm -rf *.inst.f90 # for instrumentation
|
|
||||||
@rm -rf *.pomp.f90 # for instrumentation
|
|
||||||
@rm -rf *.pp.f90 # for instrumentation
|
|
||||||
@rm -rf *.pdb # for instrumentation
|
|
||||||
@rm -rf *.opari.inc # for instrumentation
|
|
||||||
|
|
||||||
.PHONY: cleanDAMASK
|
|
||||||
cleanDAMASK:
|
|
||||||
@rm -rf *.exe
|
|
||||||
@rm -rf *.marc
|
|
||||||
@rm -rf *.o
|
|
||||||
@rm -rf *.mod
|
|
||||||
@rm -rf *.optrpt
|
|
||||||
@rm -rf *.inst.f90 # for instrumentation
|
|
||||||
@rm -rf *.pomp.f90 # for instrumentation
|
|
||||||
@rm -rf *.pp.f90 # for instrumentation
|
|
||||||
@rm -rf *.pdb # for instrumentation
|
|
||||||
@rm -rf *.opari.inc # for instrumentation
|
|
||||||
|
|
||||||
.PHONY: help
|
|
||||||
help:
|
|
||||||
F90="$(F90)"
|
|
||||||
FCOMPILERNAME="$(FCOMPILERNAME)"
|
|
||||||
COMPILEROUT="$(COMPILEROUT)"
|
|
||||||
|
|
||||||
|
|
@ -50,7 +50,7 @@ interactionSlipSlip 0.122 0.122 0.625 0.07 0.137 0.122 # Interaction coefficient
|
||||||
|
|
||||||
### Shearband parameters ###
|
### Shearband parameters ###
|
||||||
shearbandresistance 180e6
|
shearbandresistance 180e6
|
||||||
shearbandvelocity 1e-4 # set to zero to turn shear banding of
|
shearbandvelocity 0e-4 # set to zero to turn shear banding of
|
||||||
QedgePerSbSystem 3.7e-19 # Activation energy for shear banding [J]
|
QedgePerSbSystem 3.7e-19 # Activation energy for shear banding [J]
|
||||||
p_shearband 1.0 # p-exponent in glide velocity
|
p_shearband 1.0 # p-exponent in glide velocity
|
||||||
q_shearband 1.0 # q-exponent in glide velocity
|
q_shearband 1.0 # q-exponent in glide velocity
|
||||||
|
|
|
||||||
|
|
@ -18,8 +18,5 @@ tau0_slip 95.e6 97.e6 # per family, optimization long
|
||||||
tausat_slip 222.e6 412.7e6 # per family, optimization long simplex 109
|
tausat_slip 222.e6 412.7e6 # per family, optimization long simplex 109
|
||||||
h0_slipslip 1000.0e6
|
h0_slipslip 1000.0e6
|
||||||
interaction_slipslip 1 1 1.4 1.4 1.4 1.4
|
interaction_slipslip 1 1 1.4 1.4 1.4 1.4
|
||||||
interaction_sliptwin 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
interaction_twinslip 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
interaction_twintwin 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
w0_slip 2.0
|
w0_slip 2.0
|
||||||
(output) totalshear
|
(output) totalshear
|
||||||
|
|
|
||||||
|
|
@ -18,8 +18,5 @@ tau0_slip 405.8e6 456.7e6 # per family
|
||||||
tausat_slip 872.9e6 971.2e6 # per family
|
tausat_slip 872.9e6 971.2e6 # per family
|
||||||
h0_slipslip 563.0e9
|
h0_slipslip 563.0e9
|
||||||
interaction_slipslip 1 1 1.4 1.4 1.4 1.4
|
interaction_slipslip 1 1 1.4 1.4 1.4 1.4
|
||||||
interaction_sliptwin 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
interaction_twinslip 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
interaction_twintwin 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
w0_slip 2.0
|
w0_slip 2.0
|
||||||
(output) totalshear
|
(output) totalshear
|
||||||
|
|
|
||||||
|
|
@ -35,18 +35,7 @@ tausat_slip 53.00e6 # per family
|
||||||
a_slip 1.0
|
a_slip 1.0
|
||||||
gdot0_twin 0.001
|
gdot0_twin 0.001
|
||||||
n_twin 20
|
n_twin 20
|
||||||
tau0_twin 0 # per family
|
|
||||||
s_pr 0 # push-up factor for slip saturation due to twinning
|
|
||||||
twin_b 0
|
|
||||||
twin_c 0
|
|
||||||
twin_d 0
|
|
||||||
twin_e 0
|
|
||||||
h0_slipslip 75e6
|
h0_slipslip 75e6
|
||||||
h0_twinslip 0
|
|
||||||
h0_twintwin 0
|
|
||||||
interaction_slipslip 1 1 1.4 1.4 1.4 1.4
|
interaction_slipslip 1 1 1.4 1.4 1.4 1.4
|
||||||
interaction_sliptwin 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
interaction_twinslip 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
interaction_twintwin 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
atol_resistance 1
|
atol_resistance 1
|
||||||
|
|
||||||
|
|
|
||||||
|
|
@ -29,18 +29,8 @@ a_slip 2.25
|
||||||
gdot0_twin 0.001
|
gdot0_twin 0.001
|
||||||
n_twin 20
|
n_twin 20
|
||||||
tau0_twin 31e6 # per family
|
tau0_twin 31e6 # per family
|
||||||
s_pr 0 # push-up factor for slip saturation due to twinning
|
|
||||||
twin_b 0
|
|
||||||
twin_c 0
|
|
||||||
twin_d 0
|
|
||||||
twin_e 0
|
|
||||||
h0_slipslip 75e6
|
h0_slipslip 75e6
|
||||||
h0_twinslip 0
|
|
||||||
h0_twintwin 0
|
|
||||||
interaction_slipslip 1 1 1.4 1.4 1.4 1.4
|
interaction_slipslip 1 1 1.4 1.4 1.4 1.4
|
||||||
interaction_sliptwin 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
interaction_twinslip 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
interaction_twintwin 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
atol_resistance 1
|
atol_resistance 1
|
||||||
|
|
||||||
(stiffness_degradation) damage
|
(stiffness_degradation) damage
|
||||||
|
|
|
||||||
|
|
@ -52,22 +52,8 @@ n_slip 20
|
||||||
tau0_slip 31e6 # per family
|
tau0_slip 31e6 # per family
|
||||||
tausat_slip 63e6 # per family
|
tausat_slip 63e6 # per family
|
||||||
a_slip 2.25
|
a_slip 2.25
|
||||||
gdot0_twin 0.001
|
|
||||||
n_twin 20
|
|
||||||
tau0_twin 31e6 # per family
|
|
||||||
s_pr 0 # push-up factor for slip saturation due to twinning
|
|
||||||
twin_b 0
|
|
||||||
twin_c 0
|
|
||||||
twin_d 0
|
|
||||||
twin_e 0
|
|
||||||
h0_slipslip 75e6
|
h0_slipslip 75e6
|
||||||
h0_sliptwin 0
|
|
||||||
h0_twinslip 0
|
|
||||||
h0_twintwin 0
|
|
||||||
interaction_slipslip 1 1 1.4 1.4 1.4 1.4
|
interaction_slipslip 1 1 1.4 1.4 1.4 1.4
|
||||||
interaction_sliptwin 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
interaction_twinslip 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
interaction_twintwin 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
|
|
||||||
atol_resistance 1
|
atol_resistance 1
|
||||||
|
|
||||||
|
|
||||||
|
|
|
||||||
|
|
@ -31,7 +31,7 @@ fortCmd = "ifort"
|
||||||
# -integer-size 32 -DINT=4 assume size of integer to be 4 bytes, matches our definition of pInt
|
# -integer-size 32 -DINT=4 assume size of integer to be 4 bytes, matches our definition of pInt
|
||||||
|
|
||||||
compile_fortran = (fortCmd + " -c -fPIC -auto -shared-intel " +
|
compile_fortran = (fortCmd + " -c -fPIC -auto -shared-intel " +
|
||||||
"-I%I -I../lib -free -O1 -fpp -openmp " +
|
"-I%I -free -O1 -fpp -openmp " +
|
||||||
"-ftz -diag-disable 5268 " +
|
"-ftz -diag-disable 5268 " +
|
||||||
"-implicitnone -assume byterecl -stand f08 -standard-semantics " +
|
"-implicitnone -assume byterecl -stand f08 -standard-semantics " +
|
||||||
"-real-size 64 -integer-size 32 -DFLOAT=8 -DINT=4 " +
|
"-real-size 64 -integer-size 32 -DFLOAT=8 -DINT=4 " +
|
||||||
|
|
|
||||||
|
|
@ -31,7 +31,7 @@ fortCmd = "ifort"
|
||||||
# -integer-size 32 -DINT=4 assume size of integer to be 4 bytes, matches our definition of pInt
|
# -integer-size 32 -DINT=4 assume size of integer to be 4 bytes, matches our definition of pInt
|
||||||
|
|
||||||
compile_fortran = (fortCmd + " -c -fPIC -auto -shared-intel " +
|
compile_fortran = (fortCmd + " -c -fPIC -auto -shared-intel " +
|
||||||
"-I%I -I../lib -free -O1 -fpp " +
|
"-I%I -free -O1 -fpp " +
|
||||||
"-ftz -diag-disable 5268 " +
|
"-ftz -diag-disable 5268 " +
|
||||||
"-implicitnone -assume byterecl -stand f08 -standard-semantics " +
|
"-implicitnone -assume byterecl -stand f08 -standard-semantics " +
|
||||||
"-real-size 64 -integer-size 32 -DFLOAT=8 -DINT=4 " +
|
"-real-size 64 -integer-size 32 -DFLOAT=8 -DINT=4 " +
|
||||||
|
|
|
||||||
|
|
@ -56,7 +56,7 @@ echo "Editor: $EDITOR"
|
||||||
|
|
||||||
# tools
|
# tools
|
||||||
echo ''
|
echo ''
|
||||||
echo 'copying Marc tools...'
|
echo 'adapting Marc tools...'
|
||||||
theDIR=$INSTALLDIR/marc$VERSION/tools
|
theDIR=$INSTALLDIR/marc$VERSION/tools
|
||||||
for filename in 'comp_damask' \
|
for filename in 'comp_damask' \
|
||||||
'comp_damask_l' \
|
'comp_damask_l' \
|
||||||
|
|
@ -79,7 +79,7 @@ done
|
||||||
|
|
||||||
# Mentat scripts
|
# Mentat scripts
|
||||||
echo ''
|
echo ''
|
||||||
echo 'copying Mentat scripts...'
|
echo 'adapting Mentat scripts...'
|
||||||
theDIR=$INSTALLDIR/mentat$VERSION/bin
|
theDIR=$INSTALLDIR/mentat$VERSION/bin
|
||||||
for filename in 'edit_window' \
|
for filename in 'edit_window' \
|
||||||
'submit4' \
|
'submit4' \
|
||||||
|
|
@ -103,7 +103,7 @@ done
|
||||||
|
|
||||||
# Mentat scripts
|
# Mentat scripts
|
||||||
echo ''
|
echo ''
|
||||||
echo 'copying Mentat menus...'
|
echo 'adapting Mentat menus...'
|
||||||
theDIR=$INSTALLDIR/mentat$VERSION/menus
|
theDIR=$INSTALLDIR/mentat$VERSION/menus
|
||||||
for filename in 'job_run.ms'; do
|
for filename in 'job_run.ms'; do
|
||||||
cp $SCRIPTLOCATION/$VERSION/Mentat_menus/$filename $theDIR
|
cp $SCRIPTLOCATION/$VERSION/Mentat_menus/$filename $theDIR
|
||||||
|
|
@ -114,16 +114,20 @@ done
|
||||||
|
|
||||||
# compile menus
|
# compile menus
|
||||||
echo ''
|
echo ''
|
||||||
echo 'compiling menus...'
|
echo 'compiling Mentat menu binaries...'
|
||||||
$INSTALLDIR/mentat$VERSION/bin/mentat -compile $INSTALLDIR/mentat$VERSION/menus/linux64/main.msb
|
$(which xvfb-run 2>/dev/null) $INSTALLDIR/mentat$VERSION/bin/mentat -compile $INSTALLDIR/mentat$VERSION/menus/linux64/main.msb
|
||||||
|
[[ $? != 0 ]] && echo '...failed. Try installing xvfb-run on your system.'
|
||||||
|
|
||||||
# setting access rights
|
# setting access rights
|
||||||
echo ''
|
echo ''
|
||||||
echo 'setting file access rights...'
|
echo 'setting file access rights...'
|
||||||
chmod 755 $INSTALLDIR/marc$VERSION/tools/run_damask*
|
for filename in marc$VERSION/tools/run_damask* \
|
||||||
chmod 755 $INSTALLDIR/marc$VERSION/tools/comp_damask*
|
marc$VERSION/tools/comp_damask* \
|
||||||
chmod 755 $INSTALLDIR/mentat$VERSION/bin/submit{4..9}
|
mentat$VERSION/bin/submit{4..9} \
|
||||||
chmod 755 $INSTALLDIR/mentat$VERSION/bin/kill{4..9}
|
mentat$VERSION/bin/kill{4..9} \
|
||||||
|
|
||||||
|
chmod 755 $INSTALLDIR/${filename}
|
||||||
|
done
|
||||||
|
|
||||||
#creating symlinks for run_damask_scripts in /usr/local/bin
|
#creating symlinks for run_damask_scripts in /usr/local/bin
|
||||||
|
|
||||||
|
|
@ -154,5 +158,15 @@ if [ -d "$BIN_DIR" ]; then
|
||||||
esac
|
esac
|
||||||
fi
|
fi
|
||||||
|
|
||||||
|
# cloning user subroutine
|
||||||
|
echo ''
|
||||||
|
echo 'cloning $VERSION HYPELA2 user subroutine...'
|
||||||
|
ln -s DAMASK_marc.f90 ${DAMASK_ROOT}/src/DAMASK_marc${VERSION}.f90
|
||||||
|
|
||||||
|
# precompiling user subroutine
|
||||||
|
echo ''
|
||||||
|
echo 'precompiling $VERSION HYPELA2 user subroutine...'
|
||||||
|
echo 'not yet implemented..!'
|
||||||
|
|
||||||
echo ''
|
echo ''
|
||||||
echo 'done.'
|
echo 'done.'
|
||||||
|
|
|
||||||
|
|
@ -1,65 +0,0 @@
|
||||||
#!/usr/bin/env python2.7
|
|
||||||
# -*- coding: UTF-8 no BOM -*-
|
|
||||||
|
|
||||||
import os,sys
|
|
||||||
import damask
|
|
||||||
|
|
||||||
bin_link = { \
|
|
||||||
'.' : [
|
|
||||||
'DAMASK_spectral.exe',
|
|
||||||
'DAMASK_FEM.exe'
|
|
||||||
],
|
|
||||||
}
|
|
||||||
|
|
||||||
MarcReleases =[ \
|
|
||||||
'2014',
|
|
||||||
'2014.2',
|
|
||||||
'2015',
|
|
||||||
'2016'
|
|
||||||
]
|
|
||||||
|
|
||||||
damaskEnv = damask.Environment()
|
|
||||||
baseDir = damaskEnv.relPath('code/')
|
|
||||||
binDir = damaskEnv.options['DAMASK_BIN']
|
|
||||||
|
|
||||||
if not os.path.isdir(binDir):
|
|
||||||
os.mkdir(binDir)
|
|
||||||
|
|
||||||
sys.stdout.write('\nsymbolic linking...\n')
|
|
||||||
|
|
||||||
for subDir in bin_link:
|
|
||||||
theDir = os.path.abspath(os.path.join(baseDir,subDir))
|
|
||||||
sys.stdout.write('\n'+binDir+' ->\n'+theDir+damask.util.deemph(' ...')+'\n')
|
|
||||||
|
|
||||||
for theFile in bin_link[subDir]:
|
|
||||||
theName,theExt = os.path.splitext(theFile)
|
|
||||||
src = os.path.abspath(os.path.join(theDir,theFile))
|
|
||||||
|
|
||||||
if os.path.exists(src):
|
|
||||||
sym_link = os.path.abspath(os.path.join(binDir,subDir if theFile == '' else theName))
|
|
||||||
|
|
||||||
if os.path.lexists(sym_link):
|
|
||||||
os.remove(sym_link)
|
|
||||||
output = theName+damask.util.deemph(theExt)
|
|
||||||
else:
|
|
||||||
output = damask.util.emph(theName)+damask.util.deemph(theExt)
|
|
||||||
|
|
||||||
sys.stdout.write(damask.util.deemph('... ')+output+'\n')
|
|
||||||
os.symlink(src,sym_link)
|
|
||||||
|
|
||||||
|
|
||||||
sys.stdout.write('\nMSC.Marc versioning...\n\n')
|
|
||||||
theMaster = 'DAMASK_marc.f90'
|
|
||||||
|
|
||||||
for version in MarcReleases:
|
|
||||||
src = os.path.abspath(os.path.join(baseDir,theMaster))
|
|
||||||
if os.path.exists(src):
|
|
||||||
sym_link = os.path.abspath(os.path.join(baseDir,'DAMASK_marc{}.f90'.format(version)))
|
|
||||||
if os.path.lexists(sym_link):
|
|
||||||
os.remove(sym_link)
|
|
||||||
output = version
|
|
||||||
else:
|
|
||||||
output = damask.util.emph(version)
|
|
||||||
|
|
||||||
sys.stdout.write(' '+output+'\n')
|
|
||||||
os.symlink(theMaster,sym_link)
|
|
||||||
|
|
@ -2,6 +2,7 @@
|
||||||
|
|
||||||
from .solver import Solver
|
from .solver import Solver
|
||||||
import damask
|
import damask
|
||||||
|
import subprocess,re
|
||||||
|
|
||||||
class Abaqus(Solver):
|
class Abaqus(Solver):
|
||||||
|
|
||||||
|
|
@ -20,8 +21,6 @@ class Abaqus(Solver):
|
||||||
raise Exception('unknown Abaqus solver %'%solver)
|
raise Exception('unknown Abaqus solver %'%solver)
|
||||||
|
|
||||||
def return_run_command(self,model):
|
def return_run_command(self,model):
|
||||||
import subprocess
|
|
||||||
import re
|
|
||||||
env=damask.Environment()
|
env=damask.Environment()
|
||||||
shortVersion = re.sub('[\.,-]', '',self.version)
|
shortVersion = re.sub('[\.,-]', '',self.version)
|
||||||
try:
|
try:
|
||||||
|
|
@ -33,4 +32,4 @@ class Abaqus(Solver):
|
||||||
detectedVersion = process.stdout.readlines()[1].split()[1]
|
detectedVersion = process.stdout.readlines()[1].split()[1]
|
||||||
if self.version != detectedVersion:
|
if self.version != detectedVersion:
|
||||||
raise Exception('found Abaqus version %s, but requested %s'%(detectedVersion,self.version))
|
raise Exception('found Abaqus version %s, but requested %s'%(detectedVersion,self.version))
|
||||||
return '%s -job %s -user %s/code/DAMASK_abaqus_%s interactive'%(cmd,model,env.rootDir(),self.solver)
|
return '%s -job %s -user %s/src/DAMASK_abaqus_%s interactive'%(cmd,model,env.rootDir(),self.solver)
|
||||||
|
|
|
||||||
|
|
@ -13,9 +13,6 @@ class Marc(Solver):
|
||||||
'2015': ['linux64',''],
|
'2015': ['linux64',''],
|
||||||
'2014.2':['linux64',''],
|
'2014.2':['linux64',''],
|
||||||
'2014' :['linux64',''],
|
'2014' :['linux64',''],
|
||||||
'2013.1':['linux64',''],
|
|
||||||
'2013': ['linux64',''],
|
|
||||||
'2012': ['linux64',''],
|
|
||||||
}
|
}
|
||||||
|
|
||||||
|
|
||||||
|
|
@ -86,13 +83,13 @@ class Marc(Solver):
|
||||||
|
|
||||||
damaskEnv = damask.environment.Environment()
|
damaskEnv = damask.environment.Environment()
|
||||||
|
|
||||||
user = os.path.join(damaskEnv.relPath('code/'),'DAMASK_marc') # might be updated if special version (symlink) is found
|
user = os.path.join(damaskEnv.relPath('src/'),'DAMASK_marc') # might be updated if special version (symlink) is found
|
||||||
if compile:
|
if compile:
|
||||||
if os.path.isfile(os.path.join(damaskEnv.relPath('code/'),'DAMASK_marc%s.f90'%release)):
|
if os.path.isfile(os.path.join(damaskEnv.relPath('src/'),'DAMASK_marc%s.f90'%release)):
|
||||||
user = os.path.join(damaskEnv.relPath('code/'),'DAMASK_marc%s'%release)
|
user = os.path.join(damaskEnv.relPath('src/'),'DAMASK_marc%s'%release)
|
||||||
else:
|
else:
|
||||||
if os.path.isfile(os.path.join(damaskEnv.relPath('code/'),'DAMASK_marc%s.marc'%release)):
|
if os.path.isfile(os.path.join(damaskEnv.relPath('src/'),'DAMASK_marc%s.marc'%release)):
|
||||||
user = os.path.join(damaskEnv.relPath('code/'),'DAMASK_marc%s'%release)
|
user = os.path.join(damaskEnv.relPath('src/'),'DAMASK_marc%s'%release)
|
||||||
|
|
||||||
# Define options [see Marc Installation and Operation Guide, pp 23]
|
# Define options [see Marc Installation and Operation Guide, pp 23]
|
||||||
script = 'run_damask%s'%({False:'',True:'_'}[optimization!='' or openMP])
|
script = 'run_damask%s'%({False:'',True:'_'}[optimization!='' or openMP])
|
||||||
|
|
|
||||||
|
|
@ -51,23 +51,22 @@ parser.add_option( '--nonperiodic', dest='periodic', action='store_false',
|
||||||
parser.add_option( '--voxelspace', dest='voxelspace', action='store_true',
|
parser.add_option( '--voxelspace', dest='voxelspace', action='store_true',
|
||||||
help = '-c and -d are given in (0 to grid) coordinates instead of (origin to origin+size) \
|
help = '-c and -d are given in (0 to grid) coordinates instead of (origin to origin+size) \
|
||||||
coordinates [%default]')
|
coordinates [%default]')
|
||||||
parser.set_defaults(center = [0,0,0],
|
parser.set_defaults(center = (.0,.0,.0),
|
||||||
fill = 0,
|
fill = 0,
|
||||||
quaternion = [],
|
|
||||||
angleaxis = [],
|
|
||||||
degrees = False,
|
degrees = False,
|
||||||
exponent = [1e10,1e10,1e10], # box shape by default
|
exponent = (1e10,1e10,1e10), # box shape by default
|
||||||
periodic = True,
|
periodic = True,
|
||||||
voxelspace = False
|
voxelspace = False
|
||||||
)
|
)
|
||||||
|
|
||||||
(options, filenames) = parser.parse_args()
|
(options, filenames) = parser.parse_args()
|
||||||
|
if options.dimension is None:
|
||||||
if options.angleaxis != []:
|
parser.error('no dimension specified.')
|
||||||
|
if options.angleaxis is not None:
|
||||||
options.angleaxis = map(float,options.angleaxis)
|
options.angleaxis = map(float,options.angleaxis)
|
||||||
rotation = damask.Quaternion().fromAngleAxis(np.radians(options.angleaxis[0]) if options.degrees else options.angleaxis[0],
|
rotation = damask.Quaternion().fromAngleAxis(np.radians(options.angleaxis[0]) if options.degrees else options.angleaxis[0],
|
||||||
options.angleaxis[1:4])
|
options.angleaxis[1:4])
|
||||||
elif options.quaternion != []:
|
elif options.quaternion is not None:
|
||||||
options.quaternion = map(float,options.quaternion)
|
options.quaternion = map(float,options.quaternion)
|
||||||
rotation = damask.Quaternion(options.quaternion)
|
rotation = damask.Quaternion(options.quaternion)
|
||||||
else:
|
else:
|
||||||
|
|
|
||||||
|
|
@ -1,67 +1,101 @@
|
||||||
#!/usr/bin/env python2.7
|
#!/usr/bin/env python2.7
|
||||||
# -*- coding: UTF-8 no BOM -*-
|
# -*- coding: UTF-8 no BOM -*-
|
||||||
|
|
||||||
import sys,os
|
import sys,os,re,time,tempfile
|
||||||
import numpy as np
|
import numpy as np
|
||||||
from optparse import OptionParser
|
from optparse import OptionParser
|
||||||
import damask
|
import damask
|
||||||
|
|
||||||
|
sys.path.append(damask.solver.Marc().libraryPath())
|
||||||
|
|
||||||
scriptName = os.path.splitext(os.path.basename(__file__))[0]
|
scriptName = os.path.splitext(os.path.basename(__file__))[0]
|
||||||
scriptID = ' '.join([scriptName,damask.version])
|
scriptID = ' '.join([scriptName,damask.version])
|
||||||
|
|
||||||
sys.path.append(damask.solver.Marc().libraryPath())
|
# Convert .mfd file into a usable format
|
||||||
|
# Broken into labeled sections (eg. nodes, links, etc)
|
||||||
|
# Each section has a list of labeled elements with formatted numerical data
|
||||||
|
def parseMFD(dat):
|
||||||
|
formatted = []
|
||||||
|
section = 0
|
||||||
|
formatted.append({'label': 'header', 'uid': -1, 'els': []})
|
||||||
|
# in between =beg= and =end= part of file
|
||||||
|
in_block = False
|
||||||
|
for line in dat:
|
||||||
|
if in_block: # currently in a section
|
||||||
|
# lines that start with a space are numerical data
|
||||||
|
if line[0] == ' ':
|
||||||
|
formatted[section]['els'].append([])
|
||||||
|
|
||||||
active=[True,True,True] # directions on which to add PBC
|
# grab numbers
|
||||||
def outMentat(cmd,locals):
|
nums = re.split(r'\s+', line.strip())
|
||||||
if cmd[0:3] == '(!)':
|
|
||||||
exec(cmd[3:])
|
for num in nums:
|
||||||
elif cmd[0:3] == '(?)':
|
# floating point has format ' -x.xxxxxxxxxxxxe+yy'
|
||||||
cmd = eval(cmd[3:])
|
# scientific notation is used for float
|
||||||
py_mentat.py_send(cmd)
|
if (len(num) >= 4) and (num[-4] == 'e'):
|
||||||
|
formatted[section]['els'][-1].append(float(num))
|
||||||
|
else: # integer
|
||||||
|
formatted[section]['els'][-1].append(int(num))
|
||||||
|
else: # not numerical data, so it is a label for an element or section end
|
||||||
|
if line[0] == '=' and re.search(r'=end=$', line) is not None: # End of section, avoiding regex if possible
|
||||||
|
in_block = False
|
||||||
else:
|
else:
|
||||||
py_mentat.py_send(cmd)
|
formatted[section]['els'].append([])
|
||||||
return
|
formatted[section]['els'][-1] = line
|
||||||
|
|
||||||
#-------------------------------------------------------------------------------------------------
|
else: # Not in a section, we are looking for a =beg= now
|
||||||
def outFile(cmd,locals,dest):
|
search = re.search(r'=beg=\s+(\d+)\s\((.*?)\)', line)
|
||||||
if cmd[0:3] == '(!)':
|
if search is not None: # found start of a new section
|
||||||
exec(cmd[3:])
|
section += 1
|
||||||
elif cmd[0:3] == '(?)':
|
in_block = True
|
||||||
cmd = eval(cmd[3:])
|
formatted.append({'label': search.group(2), 'uid': int(search.group(1)), 'els': []})
|
||||||
dest.write(cmd+'\n')
|
else: # No =beg= found, probably in the header
|
||||||
|
# Either header or somthing we didn't plan for - just save the line so it isn't lost
|
||||||
|
if formatted[section]['uid'] > 0:
|
||||||
|
section += 1
|
||||||
|
formatted.append({'label': '', 'uid': -2, 'els': []}) # make dummy section to store unrecognized data
|
||||||
|
formatted[section]['els'].append(line)
|
||||||
|
|
||||||
|
return formatted
|
||||||
|
|
||||||
|
def asMFD(mfd_data):
|
||||||
|
result = ''
|
||||||
|
for section in mfd_data:
|
||||||
|
if section['uid'] > 0:
|
||||||
|
result += '=beg={0:5d} ({1})\n'.format(section['uid'], section['label'])
|
||||||
|
for el in section['els']:
|
||||||
|
if type(el) == str:
|
||||||
|
result += el
|
||||||
|
elif type(el) == list:
|
||||||
|
for num in el:
|
||||||
|
if type(num) == int:
|
||||||
|
result += '{:20d}'.format(num)
|
||||||
|
elif type(num) == float:
|
||||||
|
result += '{:20.12e}'.format(num)
|
||||||
else:
|
else:
|
||||||
dest.write(cmd+'\n')
|
damask.util.croak('WARNING: encountered unknown type: ' + str(type(el)))
|
||||||
return
|
result += '\n'
|
||||||
|
|
||||||
|
|
||||||
#-------------------------------------------------------------------------------------------------
|
|
||||||
def output(cmds,locals,dest):
|
|
||||||
for cmd in cmds:
|
|
||||||
if isinstance(cmd,list):
|
|
||||||
output(cmd,locals,dest)
|
|
||||||
else:
|
else:
|
||||||
if dest == 'Mentat':
|
damask.util.croak('WARNING: encountered unknown type: ' + str(type(el)))
|
||||||
outMentat(str(cmd),locals)
|
if section['uid'] > 0:
|
||||||
else:
|
result += '=end=\n'
|
||||||
outFile(str(cmd),locals,dest)
|
return result.strip()
|
||||||
return
|
|
||||||
|
|
||||||
|
|
||||||
|
def add_servoLinks(mfd_data,active=[True,True,True]): # directions on which to add PBC
|
||||||
def servoLink():
|
|
||||||
|
|
||||||
cmds = []
|
|
||||||
base = ['x','y','z']
|
base = ['x','y','z']
|
||||||
box = {'min': np.zeros(3,dtype='d'),
|
box = {'min': np.zeros(3,dtype='d'),
|
||||||
'max': np.zeros(3,dtype='d'),
|
'max': np.zeros(3,dtype='d'),
|
||||||
'delta': np.zeros(3,dtype='d'),
|
'delta': np.zeros(3,dtype='d'),
|
||||||
}
|
}
|
||||||
Nnodes = py_mentat.py_get_int("nnodes()")
|
|
||||||
NodeCoords = np.zeros((Nnodes,3),dtype='d')
|
mfd_dict = {}
|
||||||
for node in range(Nnodes):
|
for i in range(len(mfd_data)):
|
||||||
NodeCoords[node,0] = py_mentat.py_get_float("node_x(%i)"%(node+1))
|
mfd_dict[mfd_data[i]['label']] = i
|
||||||
NodeCoords[node,1] = py_mentat.py_get_float("node_y(%i)"%(node+1))
|
|
||||||
NodeCoords[node,2] = py_mentat.py_get_float("node_z(%i)"%(node+1))
|
NodeCoords = np.array(mfd_data[mfd_dict['nodes']]['els'][0::4])[:,1:4]
|
||||||
|
Nnodes = NodeCoords.shape[0]
|
||||||
|
|
||||||
box['min'] = NodeCoords.min(axis=0) # find the bounding box
|
box['min'] = NodeCoords.min(axis=0) # find the bounding box
|
||||||
box['max'] = NodeCoords.max(axis=0)
|
box['max'] = NodeCoords.max(axis=0)
|
||||||
box['delta'] = box['max']-box['min']
|
box['delta'] = box['max']-box['min']
|
||||||
|
|
@ -108,9 +142,12 @@ def servoLink():
|
||||||
if any([maxFlag[i] and active[i] for i in range(3)]):
|
if any([maxFlag[i] and active[i] for i in range(3)]):
|
||||||
linkNodes.append({'id': node+1,'coord': NodeCoords[node], 'faceMember': [maxFlag[i] and active[i] for i in range(3)]})
|
linkNodes.append({'id': node+1,'coord': NodeCoords[node], 'faceMember': [maxFlag[i] and active[i] for i in range(3)]})
|
||||||
|
|
||||||
|
mfd_data[mfd_dict['entities']]['els'][0][0] += len(linkNodes) * 3
|
||||||
|
|
||||||
baseCorner = baseNode["%.8e"%box['min'][0]]["%.8e"%box['min'][1]]["%.8e"%box['min'][2]] # detect ultimate base node
|
baseCorner = baseNode["%.8e"%box['min'][0]]["%.8e"%box['min'][1]]["%.8e"%box['min'][2]] # detect ultimate base node
|
||||||
|
|
||||||
|
links = {'uid': 1705, 'label': 'links', 'els': [[7,0],[9,0]]}
|
||||||
|
linkID = 0
|
||||||
for node in linkNodes: # loop over all linked nodes
|
for node in linkNodes: # loop over all linked nodes
|
||||||
linkCoord = [node['coord']] # start list of control node coords with my coords
|
linkCoord = [node['coord']] # start list of control node coords with my coords
|
||||||
for dir in range(3): # check for each direction
|
for dir in range(3): # check for each direction
|
||||||
|
|
@ -121,76 +158,104 @@ def servoLink():
|
||||||
|
|
||||||
nLinks = len(linkCoord)
|
nLinks = len(linkCoord)
|
||||||
for dof in [1,2,3]:
|
for dof in [1,2,3]:
|
||||||
cmds.append([
|
tied_node = node['id']
|
||||||
"*new_link *link_class servo",
|
nterms = 1 + nLinks
|
||||||
"*link_class servo *tied_node %i"%node['id'],
|
|
||||||
"*link_class servo *tied_dof %i"%dof,
|
linkID += 1
|
||||||
"*servo_nterms %i"%(1+nLinks),
|
# Link header
|
||||||
])
|
links['els'].append('link{0}\n'.format(linkID))
|
||||||
for i in range(nLinks):
|
links['els'].append([linkID, 1])
|
||||||
cmds.append([
|
links['els'].append([0])
|
||||||
"*link_class servo *servo_ret_node %i %i"\
|
links['els'].append([0])
|
||||||
%(i+1,baseNode["%.8e"%linkCoord[i][0]]["%.8e"%linkCoord[i][1]]["%.8e"%linkCoord[i][2]]),
|
links['els'].append([0, 0, 0, tied_node])
|
||||||
"*link_class servo *servo_ret_dof %i %i"%(i+1,dof),
|
|
||||||
"*link_class servo *servo_ret_coef %i 1"%(i+1),
|
# these need to be put in groups of four
|
||||||
])
|
link_payload = [dof, 0, nterms]
|
||||||
cmds.append([
|
|
||||||
"*link_class servo *servo_ret_node %i %i"%(1+nLinks,baseCorner),
|
# Individual node contributions (node, dof, coef.)
|
||||||
"*link_class servo *servo_ret_dof %i %i"%(1+nLinks,dof),
|
for i in range(nterms):
|
||||||
"*link_class servo *servo_ret_coef %i -%i"%(1+nLinks,nLinks-1),
|
if i == nLinks:
|
||||||
])
|
link_payload.append(baseCorner)
|
||||||
return cmds
|
else:
|
||||||
|
link_payload.append(baseNode["%.8e"%linkCoord[i][0]]["%.8e"%linkCoord[i][1]]["%.8e"%linkCoord[i][2]])
|
||||||
|
for i in range(nterms):
|
||||||
|
link_payload.append(dof)
|
||||||
|
for i in range(nterms):
|
||||||
|
if i == nLinks:
|
||||||
|
link_payload.append(1.0 - nLinks)
|
||||||
|
else:
|
||||||
|
link_payload.append(1.0)
|
||||||
|
|
||||||
|
# Needs to be formatted 4 data points per row, character width of 20, so 80 total
|
||||||
|
for j in range(0, len(link_payload), 4):
|
||||||
|
links['els'].append(link_payload[j:j+4])
|
||||||
|
if j+4 < len(link_payload):
|
||||||
|
links['els'].append(link_payload[j+4:])
|
||||||
|
|
||||||
|
i = 0
|
||||||
|
while i < len(mfd_data) and mfd_data[i]['uid'] < 1705: i += 1
|
||||||
|
|
||||||
|
if mfd_data[i]['uid'] == 1705: del mfd_data[i]
|
||||||
|
mfd_data.insert(i, links)
|
||||||
|
|
||||||
#--------------------------------------------------------------------------------------------------
|
#--------------------------------------------------------------------------------------------------
|
||||||
# MAIN
|
# MAIN
|
||||||
#--------------------------------------------------------------------------------------------------
|
#--------------------------------------------------------------------------------------------------
|
||||||
parser = OptionParser(option_class=damask.extendableOption, usage = '%prog [options]', description = """
|
parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [file[s]]', description = """
|
||||||
Set up servo linking to achieve periodic boundary conditions for a regular hexahedral mesh presently opened in MSC.Mentat
|
Set up servo linking to achieve periodic boundary conditions for a regular hexahedral mesh.
|
||||||
|
Use *py_connection to operate on model presently opened in MSC.Mentat.
|
||||||
|
|
||||||
""", version = scriptID)
|
""", version = scriptID)
|
||||||
|
|
||||||
parser.add_option("-p", "--port", type="int", dest="port", metavar='int',
|
parser.add_option('-p', '--port',
|
||||||
help="Mentat connection port [%default]")
|
type = int, metavar = 'int', default = None,
|
||||||
parser.add_option("-v", "--verbose", action="store_true", dest="verbose",
|
help = 'Mentat connection port')
|
||||||
help="write Mentat command stream also to stdout [%default]")
|
parser.add_option('-x',
|
||||||
parser.set_defaults(port = 40007)
|
action = 'store_false', default = True,
|
||||||
parser.set_defaults(verbose = False)
|
help = 'no PBC along x direction')
|
||||||
|
parser.add_option('-y',
|
||||||
|
action = 'store_false', default = True,
|
||||||
|
help = 'no PBC along y direction')
|
||||||
|
parser.add_option('-z',
|
||||||
|
action = 'store_false', default = True,
|
||||||
|
help = 'no PBC along z direction')
|
||||||
|
|
||||||
(options, args) = parser.parse_args()
|
(options, filenames) = parser.parse_args()
|
||||||
|
|
||||||
if options.verbose:
|
remote = options.port is not None
|
||||||
file={'croak':sys.stderr}
|
|
||||||
else:
|
|
||||||
file={'croak':sys.stdout}
|
|
||||||
|
|
||||||
try:
|
if remote and filenames != []:
|
||||||
import py_mentat
|
parser.error('file can not be specified when port is given.')
|
||||||
|
if filenames == []: filenames = [None]
|
||||||
|
|
||||||
|
if remote:
|
||||||
|
try: import py_mentat
|
||||||
except:
|
except:
|
||||||
file['croak'].write('error: no valid Mentat release found')
|
damask.util.croak('no valid Mentat release found.')
|
||||||
sys.exit(-1)
|
sys.exit(-1)
|
||||||
|
|
||||||
outputLocals = {}
|
damask.util.report(scriptName, 'waiting to connect...')
|
||||||
|
filenames = [os.path.join(tempfile._get_default_tempdir(), next(tempfile._get_candidate_names()) + '.mfd')]
|
||||||
file['croak'].write('\033[1m'+scriptName+'\033[0m\n\n')
|
|
||||||
file['croak'].write( 'waiting to connect...\n')
|
|
||||||
try:
|
try:
|
||||||
py_mentat.py_connect('',options.port)
|
py_mentat.py_connect('',options.port)
|
||||||
# prevent redrawing in Mentat, should be much faster. Since py_connect has no return value, try this to determine if failed or not
|
py_mentat.py_send('*set_save_formatted on')
|
||||||
output(['*draw_manual'],outputLocals,'Mentat')
|
py_mentat.py_send('*save_as_model "{}" yes'.format(filenames[0]))
|
||||||
|
py_mentat.py_get_int("nnodes()") # hopefully blocks until file is written
|
||||||
except:
|
except:
|
||||||
file['croak'].write('Could not connect. Set Tools/Python/"Run as Separate Process" & "Initiate"...\n')
|
damask.util.croak('failed. try setting Tools/Python/"Run as Separate Process" & "Initiate".')
|
||||||
sys.exit()
|
sys.exit()
|
||||||
file['croak'].write( 'connected...\n')
|
damask.util.croak( 'connected...')
|
||||||
|
|
||||||
output(['*remove_all_servos',
|
for name in filenames:
|
||||||
'*sweep_all',
|
while remote and not os.path.exists(name): time.sleep(0.5) # wait for Mentat to write MFD file
|
||||||
'*renumber_nodes',
|
with open( name,'r') if name is not None else sys.stdin as fileIn:
|
||||||
'*set_links off',
|
damask.util.report(scriptName, name)
|
||||||
],outputLocals,'Mentat') # script depends on consecutive numbering of nodes
|
mfd = parseMFD(fileIn)
|
||||||
|
|
||||||
cmds = servoLink()
|
add_servoLinks(mfd,[options.x,options.y,options.z])
|
||||||
output(cmds,outputLocals,'Mentat')
|
with open( name,'w') if name is not None else sys.stdout as fileOut:
|
||||||
py_mentat.py_disconnect()
|
fileOut.write(asMFD(mfd))
|
||||||
|
|
||||||
if options.verbose:
|
if remote:
|
||||||
output(cmds,outputLocals,sys.stdout)
|
try: py_mentat.py_send('*open_model "{}"'.format(filenames[0]))
|
||||||
|
except: damask.util.croak('lost connection on sending open command for "{}".'.format(filenames[0]))
|
||||||
|
|
|
||||||
|
|
@ -247,6 +247,7 @@ for name in filenames:
|
||||||
'*identify_sets',
|
'*identify_sets',
|
||||||
'*show_model',
|
'*show_model',
|
||||||
'*redraw',
|
'*redraw',
|
||||||
|
'*draw_automatic',
|
||||||
]
|
]
|
||||||
|
|
||||||
outputLocals = {}
|
outputLocals = {}
|
||||||
|
|
|
||||||
|
|
@ -1,3 +1,5 @@
|
||||||
DAMASK_marc*.f90
|
DAMASK_marc*.f90
|
||||||
|
Makefile
|
||||||
|
cmake_install.cmake
|
||||||
quit__genmod.f90
|
quit__genmod.f90
|
||||||
*.marc
|
*.marc
|
||||||
|
|
@ -0,0 +1,205 @@
|
||||||
|
# special flags for some files
|
||||||
|
if (${CMAKE_Fortran_COMPILER_ID} STREQUAL "GNU")
|
||||||
|
|
||||||
|
SET_SOURCE_FILES_PROPERTIES( "prec.f90" PROPERTIES
|
||||||
|
COMPILE_FLAGS "-fno-range-check -fall-intrinsics -fno-fast-math")
|
||||||
|
# fno-range-check: Disable range checking on results of simplification of constant expressions during compilation
|
||||||
|
# --> allows the definition of DAMASK_NaN
|
||||||
|
#-fall-intrinsics: all intrinsic procedures (including the GNU-specific extensions) are accepted. -Wintrinsics-std will be ignored
|
||||||
|
# and no user-defined procedure with the same name as any intrinsic will be called except when it is explicitly declared external
|
||||||
|
# --> allows the use of 'isnan'
|
||||||
|
#-fno-fast-math:
|
||||||
|
# --> otherwise, when setting -ffast-math, isnan always evaluates to false (I would call it a bug)
|
||||||
|
|
||||||
|
SET_SOURCE_FILES_PROPERTIES( "lattice.f90" PROPERTIES
|
||||||
|
COMPILE_FLAGS "-ffree-line-length-240")
|
||||||
|
# long lines for interaction matrix
|
||||||
|
endif()
|
||||||
|
|
||||||
|
# The dependency detection in CMake is not functioning for Fortran,
|
||||||
|
# hence we declare the dependencies from top to bottom in the following
|
||||||
|
add_library(C_ROUTINES OBJECT "C_routines.c")
|
||||||
|
set(OBJECTFILES $<TARGET_OBJECTS:C_ROUTINES>)
|
||||||
|
|
||||||
|
add_library(SYSTEM_ROUTINES OBJECT "system_routines.f90")
|
||||||
|
add_dependencies(SYSTEM_ROUTINES C_ROUTINES)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:SYSTEM_ROUTINES>)
|
||||||
|
|
||||||
|
add_library(PREC OBJECT "prec.f90")
|
||||||
|
add_dependencies(PREC SYSTEM_ROUTINES)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:PREC>)
|
||||||
|
|
||||||
|
if ("${PROJECT_NAME}" STREQUAL "DAMASK_spectral")
|
||||||
|
add_library(DAMASK_INTERFACE OBJECT "spectral_interface.f90")
|
||||||
|
elseif ("${PROJECT_NAME}" STREQUAL "DAMASK_FEM")
|
||||||
|
add_library(DAMASK_INTERFACE OBJECT "FEM_interface.f90")
|
||||||
|
endif()
|
||||||
|
add_dependencies(DAMASK_INTERFACE PREC)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:DAMASK_INTERFACE>)
|
||||||
|
|
||||||
|
add_library(IO OBJECT "IO.f90")
|
||||||
|
add_dependencies(IO DAMASK_INTERFACE)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:IO>)
|
||||||
|
|
||||||
|
add_library(NUMERICS OBJECT "numerics.f90")
|
||||||
|
add_dependencies(NUMERICS IO)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:NUMERICS>)
|
||||||
|
|
||||||
|
add_library(DEBUG OBJECT "debug.f90")
|
||||||
|
add_dependencies(DEBUG NUMERICS)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:DEBUG>)
|
||||||
|
|
||||||
|
add_library(FEsolving OBJECT "FEsolving.f90")
|
||||||
|
add_dependencies(FEsolving DEBUG)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:FEsolving>)
|
||||||
|
|
||||||
|
add_library(DAMASK_MATH OBJECT "math.f90")
|
||||||
|
add_dependencies(DAMASK_MATH FEsolving)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:DAMASK_MATH>)
|
||||||
|
|
||||||
|
# SPECTRAL solver and FEM solver use different mesh files
|
||||||
|
if ("${PROJECT_NAME}" STREQUAL "DAMASK_spectral")
|
||||||
|
add_library(MESH OBJECT "mesh.f90")
|
||||||
|
add_dependencies(MESH DAMASK_MATH)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:MESH>)
|
||||||
|
elseif ("${PROJECT_NAME}" STREQUAL "DAMASK_FEM")
|
||||||
|
add_library(FEZoo OBJECT "FEZoo.f90")
|
||||||
|
add_dependencies(FEZoo DAMASK_MATH)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:FEZoo>)
|
||||||
|
add_library(MESH OBJECT "meshFEM.f90")
|
||||||
|
add_dependencies(MESH FEZoo)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:MESH>)
|
||||||
|
endif()
|
||||||
|
|
||||||
|
add_library(MATERIAL OBJECT "material.f90")
|
||||||
|
add_dependencies(MATERIAL MESH)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:MATERIAL>)
|
||||||
|
|
||||||
|
add_library(DAMASK_HELPERS OBJECT "lattice.f90")
|
||||||
|
add_dependencies(DAMASK_HELPERS MATERIAL)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:DAMASK_HELPERS>)
|
||||||
|
|
||||||
|
# For each modular section
|
||||||
|
add_library (PLASTIC OBJECT
|
||||||
|
"plastic_dislotwin.f90"
|
||||||
|
"plastic_disloUCLA.f90"
|
||||||
|
"plastic_isotropic.f90"
|
||||||
|
"plastic_phenopowerlaw.f90"
|
||||||
|
"plastic_titanmod.f90"
|
||||||
|
"plastic_nonlocal.f90"
|
||||||
|
"plastic_none.f90"
|
||||||
|
"plastic_phenoplus.f90")
|
||||||
|
add_dependencies(PLASTIC DAMASK_HELPERS)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:PLASTIC>)
|
||||||
|
|
||||||
|
add_library (KINEMATICS OBJECT
|
||||||
|
"kinematics_cleavage_opening.f90"
|
||||||
|
"kinematics_slipplane_opening.f90"
|
||||||
|
"kinematics_thermal_expansion.f90"
|
||||||
|
"kinematics_vacancy_strain.f90"
|
||||||
|
"kinematics_hydrogen_strain.f90")
|
||||||
|
add_dependencies(KINEMATICS DAMASK_HELPERS)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:KINEMATICS>)
|
||||||
|
|
||||||
|
add_library (SOURCE OBJECT
|
||||||
|
"source_thermal_dissipation.f90"
|
||||||
|
"source_thermal_externalheat.f90"
|
||||||
|
"source_damage_isoBrittle.f90"
|
||||||
|
"source_damage_isoDuctile.f90"
|
||||||
|
"source_damage_anisoBrittle.f90"
|
||||||
|
"source_damage_anisoDuctile.f90"
|
||||||
|
"source_vacancy_phenoplasticity.f90"
|
||||||
|
"source_vacancy_irradiation.f90"
|
||||||
|
"source_vacancy_thermalfluc.f90")
|
||||||
|
add_dependencies(SOURCE DAMASK_HELPERS)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:SOURCE>)
|
||||||
|
|
||||||
|
add_library(CONSTITUTIVE OBJECT "constitutive.f90")
|
||||||
|
add_dependencies(CONSTITUTIVE PLASTIC KINEMATICS SOURCE)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:CONSTITUTIVE>)
|
||||||
|
|
||||||
|
add_library(CRYSTALLITE OBJECT "crystallite.f90")
|
||||||
|
add_dependencies(CRYSTALLITE CONSTITUTIVE)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:CRYSTALLITE>)
|
||||||
|
|
||||||
|
add_library(HOMOGENIZATION OBJECT
|
||||||
|
"homogenization_RGC.f90"
|
||||||
|
"homogenization_isostrain.f90"
|
||||||
|
"homogenization_none.f90")
|
||||||
|
add_dependencies(HOMOGENIZATION CRYSTALLITE)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:HOMOGENIZATION>)
|
||||||
|
|
||||||
|
add_library(HYDROGENFLUX OBJECT
|
||||||
|
"hydrogenflux_isoconc.f90"
|
||||||
|
"hydrogenflux_cahnhilliard.f90")
|
||||||
|
add_dependencies(HYDROGENFLUX CRYSTALLITE)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:HYDROGENFLUX>)
|
||||||
|
|
||||||
|
add_library(POROSITY OBJECT
|
||||||
|
"porosity_none.f90"
|
||||||
|
"porosity_phasefield.f90")
|
||||||
|
add_dependencies(POROSITY CRYSTALLITE)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:POROSITY>)
|
||||||
|
|
||||||
|
add_library(VACANCYFLUX OBJECT
|
||||||
|
"vacancyflux_isoconc.f90"
|
||||||
|
"vacancyflux_isochempot.f90"
|
||||||
|
"vacancyflux_cahnhilliard.f90")
|
||||||
|
add_dependencies(VACANCYFLUX CRYSTALLITE)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:VACANCYFLUX>)
|
||||||
|
|
||||||
|
add_library(DAMAGE OBJECT
|
||||||
|
"damage_none.f90"
|
||||||
|
"damage_local.f90"
|
||||||
|
"damage_nonlocal.f90")
|
||||||
|
add_dependencies(DAMAGE CRYSTALLITE)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:DAMAGE>)
|
||||||
|
|
||||||
|
add_library(THERMAL OBJECT
|
||||||
|
"thermal_isothermal.f90"
|
||||||
|
"thermal_adiabatic.f90"
|
||||||
|
"thermal_conduction.f90")
|
||||||
|
add_dependencies(THERMAL CRYSTALLITE)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:THERMAL>)
|
||||||
|
|
||||||
|
add_library(DAMASK_ENGINE OBJECT "homogenization.f90")
|
||||||
|
add_dependencies(DAMASK_ENGINE THERMAL DAMAGE VACANCYFLUX POROSITY HYDROGENFLUX HOMOGENIZATION)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:DAMASK_ENGINE>)
|
||||||
|
|
||||||
|
add_library(DAMASK_CPFE OBJECT "CPFEM2.f90")
|
||||||
|
add_dependencies(DAMASK_CPFE DAMASK_ENGINE)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:DAMASK_CPFE>)
|
||||||
|
|
||||||
|
if ("${PROJECT_NAME}" STREQUAL "DAMASK_spectral")
|
||||||
|
add_library(SPECTRAL_UTILITIES OBJECT "spectral_utilities.f90")
|
||||||
|
add_dependencies(SPECTRAL_UTILITIES DAMASK_CPFE)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:SPECTRAL_UTILITIES>)
|
||||||
|
|
||||||
|
add_library(SPECTRAL_SOLVER OBJECT
|
||||||
|
"spectral_thermal.f90"
|
||||||
|
"spectral_damage.f90"
|
||||||
|
"spectral_mech_AL.f90"
|
||||||
|
"spectral_mech_Polarisation.f90"
|
||||||
|
"spectral_mech_Basic.f90")
|
||||||
|
add_dependencies(SPECTRAL_SOLVER SPECTRAL_UTILITIES)
|
||||||
|
list(APPEND OBJECTFILES $<TARGET_OBJECTS:SPECTRAL_SOLVER>)
|
||||||
|
if(NOT "${CMAKE_BUILD_TYPE}" STREQUAL "SYNTAXONLY")
|
||||||
|
add_executable(DAMASK_spectral "DAMASK_spectral.f90" ${OBJECTFILES})
|
||||||
|
add_dependencies(DAMASK_spectral SPECTRAL_SOLVER)
|
||||||
|
endif()
|
||||||
|
elseif ("${PROJECT_NAME}" STREQUAL "DAMASK_FEM")
|
||||||
|
add_library(FEM_UTILITIES OBJECT "FEM_utilities.f90")
|
||||||
|
add_dependencies(FEM_UTILITIES DAMASK_CPFE)
|
||||||
|
|
||||||
|
add_library(FEM_SOLVER OBJECT
|
||||||
|
"FEM_hydrogenflux.f90"
|
||||||
|
"FEM_porosity.f90"
|
||||||
|
"FEM_vacancyflux.f90"
|
||||||
|
"FEM_damage.f90"
|
||||||
|
"FEM_thermal.f90"
|
||||||
|
"FEM_mech.f90")
|
||||||
|
add_dependencies(FEM_SOLVER FEM_UTILITIES)
|
||||||
|
|
||||||
|
add_executable(DAMASK_FEM "DAMASK_FEM_driver.f90")
|
||||||
|
add_dependencies(DAMASK_FEM FEM_SOLVER)
|
||||||
|
endif()
|
||||||
|
|
@ -302,6 +302,8 @@ subroutine CPFEM_general(mode, parallelExecution, ffn, ffn1, temperature_inp, dt
|
||||||
phase_plasticity, &
|
phase_plasticity, &
|
||||||
temperature, &
|
temperature, &
|
||||||
thermalMapping, &
|
thermalMapping, &
|
||||||
|
thermal_type, &
|
||||||
|
THERMAL_conduction_ID, &
|
||||||
phase_Nsources, &
|
phase_Nsources, &
|
||||||
material_homog, &
|
material_homog, &
|
||||||
material_Nhomogenization
|
material_Nhomogenization
|
||||||
|
|
@ -489,8 +491,11 @@ subroutine CPFEM_general(mode, parallelExecution, ffn, ffn1, temperature_inp, dt
|
||||||
!* If no parallel execution is required, there is no need to collect FEM input
|
!* If no parallel execution is required, there is no need to collect FEM input
|
||||||
|
|
||||||
if (.not. parallelExecution) then
|
if (.not. parallelExecution) then
|
||||||
|
chosenThermal1: select case (thermal_type(mesh_element(3,elCP)))
|
||||||
|
case (THERMAL_conduction_ID) chosenThermal1
|
||||||
temperature(material_homog(ip,elCP))%p(thermalMapping(material_homog(ip,elCP))%p(ip,elCP)) = &
|
temperature(material_homog(ip,elCP))%p(thermalMapping(material_homog(ip,elCP))%p(ip,elCP)) = &
|
||||||
temperature_inp
|
temperature_inp
|
||||||
|
end select chosenThermal1
|
||||||
materialpoint_F0(1:3,1:3,ip,elCP) = ffn
|
materialpoint_F0(1:3,1:3,ip,elCP) = ffn
|
||||||
materialpoint_F(1:3,1:3,ip,elCP) = ffn1
|
materialpoint_F(1:3,1:3,ip,elCP) = ffn1
|
||||||
|
|
||||||
|
|
@ -499,8 +504,11 @@ subroutine CPFEM_general(mode, parallelExecution, ffn, ffn1, temperature_inp, dt
|
||||||
if (rnd < 0.5_pReal) rnd = rnd - 1.0_pReal
|
if (rnd < 0.5_pReal) rnd = rnd - 1.0_pReal
|
||||||
CPFEM_cs(1:6,ip,elCP) = rnd * CPFEM_odd_stress
|
CPFEM_cs(1:6,ip,elCP) = rnd * CPFEM_odd_stress
|
||||||
CPFEM_dcsde(1:6,1:6,ip,elCP) = CPFEM_odd_jacobian * math_identity2nd(6)
|
CPFEM_dcsde(1:6,1:6,ip,elCP) = CPFEM_odd_jacobian * math_identity2nd(6)
|
||||||
|
chosenThermal2: select case (thermal_type(mesh_element(3,elCP)))
|
||||||
|
case (THERMAL_conduction_ID) chosenThermal2
|
||||||
temperature(material_homog(ip,elCP))%p(thermalMapping(material_homog(ip,elCP))%p(ip,elCP)) = &
|
temperature(material_homog(ip,elCP))%p(thermalMapping(material_homog(ip,elCP))%p(ip,elCP)) = &
|
||||||
temperature_inp
|
temperature_inp
|
||||||
|
end select chosenThermal2
|
||||||
materialpoint_F0(1:3,1:3,ip,elCP) = ffn
|
materialpoint_F0(1:3,1:3,ip,elCP) = ffn
|
||||||
materialpoint_F(1:3,1:3,ip,elCP) = ffn1
|
materialpoint_F(1:3,1:3,ip,elCP) = ffn1
|
||||||
CPFEM_calc_done = .false.
|
CPFEM_calc_done = .false.
|
||||||
|
|
@ -0,0 +1 @@
|
||||||
|
DAMASK_marc.f90
|
||||||
|
|
@ -0,0 +1 @@
|
||||||
|
DAMASK_marc.f90
|
||||||
|
|
@ -0,0 +1 @@
|
||||||
|
DAMASK_marc.f90
|
||||||
|
|
@ -0,0 +1 @@
|
||||||
|
DAMASK_marc.f90
|
||||||
|
|
@ -0,0 +1 @@
|
||||||
|
DAMASK_marc.f90
|
||||||
|
|
@ -0,0 +1 @@
|
||||||
|
DAMASK_marc.f90
|
||||||
|
|
@ -0,0 +1 @@
|
||||||
|
DAMASK_marc.f90
|
||||||
|
|
@ -1428,7 +1428,6 @@ subroutine crystallite_integrateStateRK4()
|
||||||
!$OMP DO
|
!$OMP DO
|
||||||
do e = eIter(1),eIter(2); do i = iIter(1,e),iIter(2,e); do g = gIter(1,e),gIter(2,e) ! iterate over elements, ips and grains
|
do e = eIter(1),eIter(2); do i = iIter(1,e),iIter(2,e); do g = gIter(1,e),gIter(2,e) ! iterate over elements, ips and grains
|
||||||
if (crystallite_todo(g,i,e)) &
|
if (crystallite_todo(g,i,e)) &
|
||||||
!***dirty way to pass orientation information
|
|
||||||
call constitutive_microstructure(crystallite_orientation, &
|
call constitutive_microstructure(crystallite_orientation, &
|
||||||
crystallite_Fe(1:3,1:3,g,i,e), &
|
crystallite_Fe(1:3,1:3,g,i,e), &
|
||||||
crystallite_Fp(1:3,1:3,g,i,e), &
|
crystallite_Fp(1:3,1:3,g,i,e), &
|
||||||
|
|
@ -1754,7 +1753,6 @@ subroutine crystallite_integrateStateRKCK45()
|
||||||
!$OMP DO
|
!$OMP DO
|
||||||
do e = eIter(1),eIter(2); do i = iIter(1,e),iIter(2,e); do g = gIter(1,e),gIter(2,e) ! iterate over elements, ips and grains
|
do e = eIter(1),eIter(2); do i = iIter(1,e),iIter(2,e); do g = gIter(1,e),gIter(2,e) ! iterate over elements, ips and grains
|
||||||
if (crystallite_todo(g,i,e)) &
|
if (crystallite_todo(g,i,e)) &
|
||||||
!***dirty way to pass orientations to constitutive_microstructure
|
|
||||||
call constitutive_microstructure(crystallite_orientation, &
|
call constitutive_microstructure(crystallite_orientation, &
|
||||||
crystallite_Fe(1:3,1:3,g,i,e), &
|
crystallite_Fe(1:3,1:3,g,i,e), &
|
||||||
crystallite_Fp(1:3,1:3,g,i,e), &
|
crystallite_Fp(1:3,1:3,g,i,e), &
|
||||||
|
|
@ -1974,7 +1972,6 @@ subroutine crystallite_integrateStateRKCK45()
|
||||||
!$OMP DO
|
!$OMP DO
|
||||||
do e = eIter(1),eIter(2); do i = iIter(1,e),iIter(2,e); do g = gIter(1,e),gIter(2,e) ! iterate over elements, ips and grains
|
do e = eIter(1),eIter(2); do i = iIter(1,e),iIter(2,e); do g = gIter(1,e),gIter(2,e) ! iterate over elements, ips and grains
|
||||||
if (crystallite_todo(g,i,e)) &
|
if (crystallite_todo(g,i,e)) &
|
||||||
!***dirty way to pass orientations to constitutive_microstructure
|
|
||||||
call constitutive_microstructure(crystallite_orientation, &
|
call constitutive_microstructure(crystallite_orientation, &
|
||||||
crystallite_Fe(1:3,1:3,g,i,e), &
|
crystallite_Fe(1:3,1:3,g,i,e), &
|
||||||
crystallite_Fp(1:3,1:3,g,i,e), &
|
crystallite_Fp(1:3,1:3,g,i,e), &
|
||||||
|
|
@ -2209,7 +2206,6 @@ subroutine crystallite_integrateStateAdaptiveEuler()
|
||||||
!$OMP DO
|
!$OMP DO
|
||||||
do e = eIter(1),eIter(2); do i = iIter(1,e),iIter(2,e); do g = gIter(1,e),gIter(2,e) ! iterate over elements, ips and grains
|
do e = eIter(1),eIter(2); do i = iIter(1,e),iIter(2,e); do g = gIter(1,e),gIter(2,e) ! iterate over elements, ips and grains
|
||||||
if (crystallite_todo(g,i,e)) &
|
if (crystallite_todo(g,i,e)) &
|
||||||
!***dirty way to pass orientations to constitutive_microstructure
|
|
||||||
call constitutive_microstructure(crystallite_orientation, &
|
call constitutive_microstructure(crystallite_orientation, &
|
||||||
crystallite_Fe(1:3,1:3,g,i,e), &
|
crystallite_Fe(1:3,1:3,g,i,e), &
|
||||||
crystallite_Fp(1:3,1:3,g,i,e), &
|
crystallite_Fp(1:3,1:3,g,i,e), &
|
||||||
|
|
@ -2553,7 +2549,6 @@ eIter = FEsolving_execElem(1:2)
|
||||||
!$OMP DO
|
!$OMP DO
|
||||||
do e = eIter(1),eIter(2); do i = iIter(1,e),iIter(2,e); do g = gIter(1,e),gIter(2,e) ! iterate over elements, ips and grains
|
do e = eIter(1),eIter(2); do i = iIter(1,e),iIter(2,e); do g = gIter(1,e),gIter(2,e) ! iterate over elements, ips and grains
|
||||||
if (crystallite_todo(g,i,e) .and. .not. crystallite_converged(g,i,e)) &
|
if (crystallite_todo(g,i,e) .and. .not. crystallite_converged(g,i,e)) &
|
||||||
!***dirty way to pass orientations to constitutive_microstructure
|
|
||||||
call constitutive_microstructure(crystallite_orientation, &
|
call constitutive_microstructure(crystallite_orientation, &
|
||||||
crystallite_Fe(1:3,1:3,g,i,e), &
|
crystallite_Fe(1:3,1:3,g,i,e), &
|
||||||
crystallite_Fp(1:3,1:3,g,i,e), &
|
crystallite_Fp(1:3,1:3,g,i,e), &
|
||||||
|
|
@ -2798,7 +2793,6 @@ subroutine crystallite_integrateStateFPI()
|
||||||
!$OMP DO PRIVATE(p,c)
|
!$OMP DO PRIVATE(p,c)
|
||||||
do e = eIter(1),eIter(2); do i = iIter(1,e),iIter(2,e); do g = gIter(1,e),gIter(2,e) ! iterate over elements, ips and grains
|
do e = eIter(1),eIter(2); do i = iIter(1,e),iIter(2,e); do g = gIter(1,e),gIter(2,e) ! iterate over elements, ips and grains
|
||||||
if (crystallite_todo(g,i,e) .and. .not. crystallite_converged(g,i,e)) &
|
if (crystallite_todo(g,i,e) .and. .not. crystallite_converged(g,i,e)) &
|
||||||
!***dirty way to pass orientations to constitutive_micrsotructure
|
|
||||||
call constitutive_microstructure(crystallite_orientation, &
|
call constitutive_microstructure(crystallite_orientation, &
|
||||||
crystallite_Fe(1:3,1:3,g,i,e), &
|
crystallite_Fe(1:3,1:3,g,i,e), &
|
||||||
crystallite_Fp(1:3,1:3,g,i,e), &
|
crystallite_Fp(1:3,1:3,g,i,e), &
|
||||||
|
|
@ -1266,8 +1266,6 @@ subroutine lattice_init
|
||||||
debug_level, &
|
debug_level, &
|
||||||
debug_lattice, &
|
debug_lattice, &
|
||||||
debug_levelBasic
|
debug_levelBasic
|
||||||
use numerics, only: &
|
|
||||||
worldrank
|
|
||||||
|
|
||||||
implicit none
|
implicit none
|
||||||
integer(pInt), parameter :: FILEUNIT = 200_pInt
|
integer(pInt), parameter :: FILEUNIT = 200_pInt
|
||||||
|
|
@ -729,6 +729,8 @@ end subroutine material_parseHomogenization
|
||||||
!> @brief parses the microstructure part in the material configuration file
|
!> @brief parses the microstructure part in the material configuration file
|
||||||
!--------------------------------------------------------------------------------------------------
|
!--------------------------------------------------------------------------------------------------
|
||||||
subroutine material_parseMicrostructure(fileUnit,myPart)
|
subroutine material_parseMicrostructure(fileUnit,myPart)
|
||||||
|
use prec, only: &
|
||||||
|
dNeq
|
||||||
use IO
|
use IO
|
||||||
use mesh, only: &
|
use mesh, only: &
|
||||||
mesh_element, &
|
mesh_element, &
|
||||||
|
|
@ -738,7 +740,6 @@ subroutine material_parseMicrostructure(fileUnit,myPart)
|
||||||
character(len=*), intent(in) :: myPart
|
character(len=*), intent(in) :: myPart
|
||||||
integer(pInt), intent(in) :: fileUnit
|
integer(pInt), intent(in) :: fileUnit
|
||||||
|
|
||||||
|
|
||||||
integer(pInt), allocatable, dimension(:) :: chunkPos
|
integer(pInt), allocatable, dimension(:) :: chunkPos
|
||||||
integer(pInt) :: Nsections, section, constituent, e, i
|
integer(pInt) :: Nsections, section, constituent, e, i
|
||||||
character(len=65536) :: &
|
character(len=65536) :: &
|
||||||
|
|
@ -818,9 +819,10 @@ subroutine material_parseMicrostructure(fileUnit,myPart)
|
||||||
|
|
||||||
!sanity check
|
!sanity check
|
||||||
do section = 1_pInt, Nsections
|
do section = 1_pInt, Nsections
|
||||||
if (sum(microstructure_fraction(:,section)) /= 1.0_pReal) &
|
if (dNeq(sum(microstructure_fraction(:,section)),1.0_pReal)) &
|
||||||
call IO_error(153_pInt,ext_msg=microstructure_name(section))
|
call IO_error(153_pInt,ext_msg=microstructure_name(section))
|
||||||
enddo
|
enddo
|
||||||
|
|
||||||
end subroutine material_parseMicrostructure
|
end subroutine material_parseMicrostructure
|
||||||
|
|
||||||
|
|
||||||
|
|
@ -452,7 +452,6 @@ pure function math_tensorproduct(A,B)
|
||||||
implicit none
|
implicit none
|
||||||
real(pReal), dimension(:), intent(in) :: A,B
|
real(pReal), dimension(:), intent(in) :: A,B
|
||||||
real(pReal), dimension(size(A,1),size(B,1)) :: math_tensorproduct
|
real(pReal), dimension(size(A,1),size(B,1)) :: math_tensorproduct
|
||||||
|
|
||||||
integer(pInt) :: i,j
|
integer(pInt) :: i,j
|
||||||
|
|
||||||
forall (i=1_pInt:size(A,1),j=1_pInt:size(B,1)) math_tensorproduct(i,j) = A(i)*B(j)
|
forall (i=1_pInt:size(A,1),j=1_pInt:size(B,1)) math_tensorproduct(i,j) = A(i)*B(j)
|
||||||
|
|
@ -921,10 +921,8 @@ subroutine mesh_build_ipCoordinates
|
||||||
integer(pInt) :: e,t,g,c,i,n
|
integer(pInt) :: e,t,g,c,i,n
|
||||||
real(pReal), dimension(3) :: myCoords
|
real(pReal), dimension(3) :: myCoords
|
||||||
|
|
||||||
if (.not. allocated(mesh_ipCoordinates)) then
|
if (.not. allocated(mesh_ipCoordinates)) &
|
||||||
allocate(mesh_ipCoordinates(3,mesh_maxNips,mesh_NcpElems))
|
allocate(mesh_ipCoordinates(3,mesh_maxNips,mesh_NcpElems),source=0.0_pReal)
|
||||||
mesh_ipCoordinates = 0.0_pReal
|
|
||||||
endif
|
|
||||||
|
|
||||||
!$OMP PARALLEL DO PRIVATE(t,g,c,myCoords)
|
!$OMP PARALLEL DO PRIVATE(t,g,c,myCoords)
|
||||||
do e = 1_pInt,mesh_NcpElems ! loop over cpElems
|
do e = 1_pInt,mesh_NcpElems ! loop over cpElems
|
||||||
|
|
@ -936,7 +934,7 @@ subroutine mesh_build_ipCoordinates
|
||||||
do n = 1_pInt,FE_NcellnodesPerCell(c) ! loop over cell nodes in this cell
|
do n = 1_pInt,FE_NcellnodesPerCell(c) ! loop over cell nodes in this cell
|
||||||
myCoords = myCoords + mesh_cellnode(1:3,mesh_cell(n,i,e))
|
myCoords = myCoords + mesh_cellnode(1:3,mesh_cell(n,i,e))
|
||||||
enddo
|
enddo
|
||||||
mesh_ipCoordinates(1:3,i,e) = myCoords / FE_NcellnodesPerCell(c)
|
mesh_ipCoordinates(1:3,i,e) = myCoords / real(FE_NcellnodesPerCell(c),pReal)
|
||||||
enddo
|
enddo
|
||||||
enddo
|
enddo
|
||||||
!$OMP END PARALLEL DO
|
!$OMP END PARALLEL DO
|
||||||
|
|
@ -955,7 +953,6 @@ pure function mesh_cellCenterCoordinates(ip,el)
|
||||||
real(pReal), dimension(3) :: mesh_cellCenterCoordinates !< x,y,z coordinates of the cell center of the requested IP cell
|
real(pReal), dimension(3) :: mesh_cellCenterCoordinates !< x,y,z coordinates of the cell center of the requested IP cell
|
||||||
integer(pInt) :: t,g,c,n
|
integer(pInt) :: t,g,c,n
|
||||||
|
|
||||||
|
|
||||||
t = mesh_element(2_pInt,el) ! get element type
|
t = mesh_element(2_pInt,el) ! get element type
|
||||||
g = FE_geomtype(t) ! get geometry type
|
g = FE_geomtype(t) ! get geometry type
|
||||||
c = FE_celltype(g) ! get cell type
|
c = FE_celltype(g) ! get cell type
|
||||||
|
|
@ -963,7 +960,7 @@ pure function mesh_cellCenterCoordinates(ip,el)
|
||||||
do n = 1_pInt,FE_NcellnodesPerCell(c) ! loop over cell nodes in this cell
|
do n = 1_pInt,FE_NcellnodesPerCell(c) ! loop over cell nodes in this cell
|
||||||
mesh_cellCenterCoordinates = mesh_cellCenterCoordinates + mesh_cellnode(1:3,mesh_cell(n,ip,el))
|
mesh_cellCenterCoordinates = mesh_cellCenterCoordinates + mesh_cellnode(1:3,mesh_cell(n,ip,el))
|
||||||
enddo
|
enddo
|
||||||
mesh_cellCenterCoordinates = mesh_cellCenterCoordinates / FE_NcellnodesPerCell(c)
|
mesh_cellCenterCoordinates = mesh_cellCenterCoordinates / real(FE_NcellnodesPerCell(c),pReal)
|
||||||
|
|
||||||
end function mesh_cellCenterCoordinates
|
end function mesh_cellCenterCoordinates
|
||||||
|
|
||||||
|
|
@ -1511,8 +1508,8 @@ function mesh_nodesAroundCentres(gDim,Favg,centres) result(nodes)
|
||||||
shift = sign(abs(iRes+diag-2_pInt*me)/(iRes+diag),iRes+diag-2_pInt*me)
|
shift = sign(abs(iRes+diag-2_pInt*me)/(iRes+diag),iRes+diag-2_pInt*me)
|
||||||
lookup = me-diag+shift*iRes
|
lookup = me-diag+shift*iRes
|
||||||
wrappedCentres(1:3,i+1_pInt, j+1_pInt, k+1_pInt) = &
|
wrappedCentres(1:3,i+1_pInt, j+1_pInt, k+1_pInt) = &
|
||||||
centres(1:3,lookup(1)+1_pInt,lookup(2)+1_pInt,lookup(3)+1_pInt) - &
|
centres(1:3,lookup(1)+1_pInt,lookup(2)+1_pInt,lookup(3)+1_pInt) &
|
||||||
math_mul33x3(Favg, shift*gDim)
|
- math_mul33x3(Favg, real(shift,pReal)*gDim)
|
||||||
endif
|
endif
|
||||||
enddo; enddo; enddo
|
enddo; enddo; enddo
|
||||||
|
|
||||||
|
|
@ -3352,15 +3349,10 @@ end function FE_mapElemtype
|
||||||
subroutine mesh_faceMatch(elem, face ,matchingElem, matchingFace)
|
subroutine mesh_faceMatch(elem, face ,matchingElem, matchingFace)
|
||||||
|
|
||||||
implicit none
|
implicit none
|
||||||
!*** output variables
|
|
||||||
integer(pInt), intent(out) :: matchingElem, & ! matching CP element ID
|
integer(pInt), intent(out) :: matchingElem, & ! matching CP element ID
|
||||||
matchingFace ! matching face ID
|
matchingFace ! matching face ID
|
||||||
|
|
||||||
!*** input variables
|
|
||||||
integer(pInt), intent(in) :: face, & ! face ID
|
integer(pInt), intent(in) :: face, & ! face ID
|
||||||
elem ! CP elem ID
|
elem ! CP elem ID
|
||||||
|
|
||||||
!*** local variables
|
|
||||||
integer(pInt), dimension(FE_NmatchingNodesPerFace(face,FE_geomtype(mesh_element(2,elem)))) :: &
|
integer(pInt), dimension(FE_NmatchingNodesPerFace(face,FE_geomtype(mesh_element(2,elem)))) :: &
|
||||||
myFaceNodes ! global node ids on my face
|
myFaceNodes ! global node ids on my face
|
||||||
integer(pInt) :: myType, &
|
integer(pInt) :: myType, &
|
||||||
|
|
@ -251,10 +251,8 @@ subroutine numerics_init
|
||||||
!--------------------------------------------------------------------------------------------------
|
!--------------------------------------------------------------------------------------------------
|
||||||
! try to open the config file
|
! try to open the config file
|
||||||
fileExists: if(IO_open_file_stat(FILEUNIT,numerics_configFile)) then
|
fileExists: if(IO_open_file_stat(FILEUNIT,numerics_configFile)) then
|
||||||
mainProcess2: if (worldrank == 0) then
|
|
||||||
write(6,'(a,/)') ' using values from config file'
|
write(6,'(a,/)') ' using values from config file'
|
||||||
flush(6)
|
flush(6)
|
||||||
endif mainProcess2
|
|
||||||
|
|
||||||
!--------------------------------------------------------------------------------------------------
|
!--------------------------------------------------------------------------------------------------
|
||||||
! read variables from config file and overwrite default parameters if keyword is present
|
! read variables from config file and overwrite default parameters if keyword is present
|
||||||
|
|
@ -694,9 +692,9 @@ subroutine numerics_init
|
||||||
.not. memory_efficient) call IO_error(error_ID = 847_pInt)
|
.not. memory_efficient) call IO_error(error_ID = 847_pInt)
|
||||||
if (err_stress_tolrel <= 0.0_pReal) call IO_error(301_pInt,ext_msg='err_stress_tolRel')
|
if (err_stress_tolrel <= 0.0_pReal) call IO_error(301_pInt,ext_msg='err_stress_tolRel')
|
||||||
if (err_stress_tolabs <= 0.0_pReal) call IO_error(301_pInt,ext_msg='err_stress_tolAbs')
|
if (err_stress_tolabs <= 0.0_pReal) call IO_error(301_pInt,ext_msg='err_stress_tolAbs')
|
||||||
if (err_div_tolRel <= 0.0_pReal) call IO_error(301_pInt,ext_msg='err_div_tolRel')
|
if (err_div_tolRel < 0.0_pReal) call IO_error(301_pInt,ext_msg='err_div_tolRel')
|
||||||
if (err_div_tolAbs <= 0.0_pReal) call IO_error(301_pInt,ext_msg='err_div_tolAbs')
|
if (err_div_tolAbs <= 0.0_pReal) call IO_error(301_pInt,ext_msg='err_div_tolAbs')
|
||||||
if (err_curl_tolRel <= 0.0_pReal) call IO_error(301_pInt,ext_msg='err_curl_tolRel')
|
if (err_curl_tolRel < 0.0_pReal) call IO_error(301_pInt,ext_msg='err_curl_tolRel')
|
||||||
if (err_curl_tolAbs <= 0.0_pReal) call IO_error(301_pInt,ext_msg='err_curl_tolAbs')
|
if (err_curl_tolAbs <= 0.0_pReal) call IO_error(301_pInt,ext_msg='err_curl_tolAbs')
|
||||||
if (polarAlpha <= 0.0_pReal .or. &
|
if (polarAlpha <= 0.0_pReal .or. &
|
||||||
polarAlpha > 2.0_pReal) call IO_error(301_pInt,ext_msg='polarAlpha')
|
polarAlpha > 2.0_pReal) call IO_error(301_pInt,ext_msg='polarAlpha')
|
||||||
|
|
@ -57,7 +57,9 @@ subroutine DAMASK_interface_init()
|
||||||
tag
|
tag
|
||||||
integer :: &
|
integer :: &
|
||||||
i, &
|
i, &
|
||||||
|
#ifdef _OPENMP
|
||||||
threadLevel, &
|
threadLevel, &
|
||||||
|
#endif
|
||||||
worldrank = 0, &
|
worldrank = 0, &
|
||||||
worldsize = 0
|
worldsize = 0
|
||||||
integer, allocatable, dimension(:) :: &
|
integer, allocatable, dimension(:) :: &
|
||||||
Some files were not shown because too many files have changed in this diff Show More
Loading…
Reference in New Issue