simplified
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src/math.f90
24
src/math.f90
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@ -1817,16 +1817,12 @@ function math_sampleFiberOri(alpha,beta,FWHM)
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tol_math_check
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implicit none
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real(pReal), dimension(3) :: math_sampleFiberOri, fiberInC,fiberInS,axis
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real(pReal), dimension(2), intent(in) :: alpha,beta
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real(pReal), intent(in) :: FWHM
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real(pReal), dimension(3) :: math_sampleFiberOri, fiberInC,fiberInS,axis
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real(pReal), dimension(6) :: rnd
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real(pReal), dimension(3,3) :: oRot,fRot,pRot
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real(pReal) :: cos2Scatter, angle
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integer(pInt), dimension(2,3), parameter :: ROTMAP = reshape([2_pInt,3_pInt,&
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3_pInt,1_pInt,&
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1_pInt,2_pInt],[2,3])
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integer(pInt) :: i
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! MD: this is a leftover from using the wrongly scaled Gaussian distribution.
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! I'm relatively sure that it is not correct to scale by any constant factor here
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@ -1841,15 +1837,8 @@ function math_sampleFiberOri(alpha,beta,FWHM)
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sin(beta(1))*sin(beta(2)), &
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cos(beta(1))]
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! ---# rotation matrix from sample to crystal system #---
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angle = -acos(dot_product(fiberInC,fiberInS))
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if(abs(angle) > tol_math_check) then
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! rotation axis between sample and crystal system (cross product)
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forall(i=1_pInt:3_pInt) axis(i) = fiberInC(ROTMAP(1,i))*fiberInS(ROTMAP(2,i))-fiberInC(ROTMAP(2,i))*fiberInS(ROTMAP(1,i))
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oRot = math_EulerAxisAngleToR(math_crossproduct(fiberInC,fiberInS),angle)
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else
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oRot = math_I3
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end if
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oRot = merge(math_EulerAxisAngleToR(math_crossproduct(fiberInC,fiberInS),angle),
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math_I3, acos(dot_product(fiberInC,fiberInS)) > tol_math_check)
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GaussConvolution: do
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rnd = halton(int([14,5,10,3,9,17],pInt))
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@ -1860,14 +1849,15 @@ function math_sampleFiberOri(alpha,beta,FWHM)
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! random axis pependicular to fiber axis
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axis(1:2) = rnd(2:3)
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if (abs(fiberInS(3)) > tol_math_check) then
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axis(3)=-(axis(1)*fiberInS(1)+axis(2)*fiberInS(2))/fiberInS(3)
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axis(3)=-(axis(1)*fiberInS(1)+axis(2)*fiberInS(2))
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else if(abs(fiberInS(2)) > tol_math_check) then
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axis(3)=axis(2)
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axis(2)=-(axis(1)*fiberInS(1)+axis(3)*fiberInS(3))/fiberInS(2)
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axis(2)=-(axis(1)*fiberInS(1)+axis(3)*fiberInS(3))
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else if(abs(fiberInS(1)) > tol_math_check) then
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axis(3)=axis(1)
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axis(1)=-(axis(2)*fiberInS(2)+axis(3)*fiberInS(3))/fiberInS(1)
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axis(1)=-(axis(2)*fiberInS(2)+axis(3)*fiberInS(3))
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end if
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axis = axis/norm2(axis)
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! rotate by XXX amount around axis perpendicular to fiber axis
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! Proabably https://math.stackexchange.com/questions/56784 is the right approach
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