added release '2011'.
added toolsPath() method. added optional release hinting for path determinations. streamlined submit_job method.
This commit is contained in:
Philip Eisenlohr
parent
6a5733e53e
commit
4eb754b1fb
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@ -10,6 +10,7 @@ class Marc(Solver):
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#--------------------------
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self.solver = 'Marc'
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self.releases = { \
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'2011': ['linux64',''],
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'2010.2':['linux64',''],
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'2010': ['linux64',''],
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'2008r1':[''],
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@ -27,22 +28,25 @@ class Marc(Solver):
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for release,subdirs in sorted(self.releases.items(),reverse=True):
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for subdir in subdirs:
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libPath = '%s/mentat%s/shlib/%s'%(MSCpath,release,subdir)
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if os.path.exists(libPath): return release
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path = '%s/mentat%s/shlib/%s'%(MSCpath,release,subdir)
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if os.path.exists(path): return release
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else: continue
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return ''
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#--------------------------
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def libraryPath(self,rootRelation = ''):
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def libraryPath(self,rootRelation = '',releases = []):
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#--------------------------
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import os,damask.environment
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MSCpath = damask.environment.Environment(rootRelation).pathInfo['msc']
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for release,subdirs in sorted(self.releases.items(),reverse=True):
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for subdir in subdirs:
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if len(releases) == 0: releases = self.releases.keys()
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if type(releases) is not list: releases = [releases]
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for release in sorted(releases,reverse=True):
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if release not in self.releases: continue
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for subdir in self.releases[release]:
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libPath = '%s/mentat%s/shlib/%s'%(MSCpath,release,subdir)
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if os.path.exists(libPath): return libPath
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else: continue
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@ -50,64 +54,65 @@ class Marc(Solver):
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return ''
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#--------------------------
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def toolsPath(self,rootRelation = '',release = ''):
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#--------------------------
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import os,damask.environment
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MSCpath = damask.environment.Environment(rootRelation).pathInfo['msc']
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if len(release) == 0: release = self.version(rootRelation)
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path = '%s/marc%s/tools'%(MSCpath,release)
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if os.path.exists(path): return path
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else: return ''
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#--------------------------
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def submit_job(self,
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#--------------------------
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rootRelation = '',
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run_marc_path='/msc/marc2010/tools/',
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subroutine_dir=None,
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subroutine_name='DAMASK_marc2010',
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compile=False,
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compiled_dir='../../../code/',
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modelname='one_element_model',
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jobname='job1',
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#IOdir='',
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host=[]
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):
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release = '',
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model = 'model',
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job = 'job1',
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logfile = None,
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compile = False,
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):
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import os,damask.environment
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import subprocess, shlex
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import shutil
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import subprocess,shlex,shutil
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if len(release) == 0: release = self.version(rootRelation)
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damaskEnv = damask.environment.Environment(rootRelation)
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if subroutine_dir is None: subroutine_dir = damaskEnv.relPath('code/')
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if subroutine_name is None: subroutine_name = 'DAMASK_marc' + self.version(rootRelation)
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if run_marc_path is None: run_marc_path = os.path.join(damaskEnv.pathInfo['msc'],self.version(rootRelation),'tools/')
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# Define all options [see Marc Installation and Operation Guide, pp 23]
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run_marc = os.path.join(run_marc_path,'run_marc')
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jid = ' -jid ' + modelname + '_' + jobname
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compilation=' -u ' + os.path.join(subroutine_dir,subroutine_name+'.f90') + ' -save y'
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options=' -nprocd 1 -autorst 0 -ci n -cr n -dcoup 0 -b no -v no'
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cmd=run_marc+jid+options
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user = os.path.join(damaskEnv.relPath('code/'),'DAMASK_marc%s'%release)
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# Define options [see Marc Installation and Operation Guide, pp 23]
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cmd = os.path.join(self.toolsPath(rootRelation,release),'run_marc') + \
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' -jid ' + model + '_' + job + \
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' -nprocd 1 -autorst 0 -ci n -cr n -dcoup 0 -b no -v no'
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if compile: cmd += ' -u ' + user+'.f90' + ' -save y'
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else: cmd += ' -prog ' + user
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print 'job submission with%s compilation: %s'%({False:'out',True:''}[compile],user)
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if compile:
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cmd += compilation
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print 'job submission with compilation.'
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else:
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shutil.copy2(os.path.join(subroutine_dir,subroutine_name+'.f90'),os.path.join('.',subroutine_name+'.f90'))
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shutil.copy2(os.path.join(compiled_dir,subroutine_name+'.marc'),os.path.join('.',subroutine_name+'.marc'))
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prog = ' -prog ' + subroutine_name
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cmd += prog
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print 'Job submission without compilation, using %s'%prog
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out = open('out.log','w')
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print(cmd)
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#print shlex.split(cmd)
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self.p = subprocess.Popen(shlex.split(cmd),stdout=out,stderr=subprocess.STDOUT)
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self.p = subprocess.Popen(shlex.split(cmd),stdout = logfile,stderr = subprocess.STDOUT)
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self.p.wait()
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out.close()
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#--------------------------
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def exit_number_from_outFile(self,outFile=None):
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#--------------------------
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import string
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exitnumber = -1
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fid_out = open(outFile,'r')
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for ln in fid_out:
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if (string.find(ln,'tress iteration') is not -1):
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print ln
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elif (string.find(ln,'Exit number') is not -1):
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substr = ln[string.find(ln,'Exit number'):len(ln)]
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exitnumber = substr[12:16]
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fid_out.close()
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return int(exitnumber)
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exitnumber = int(substr[12:16])
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fid_out.close()
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return -1
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return exitnumber
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