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DAMASK_EICMD
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added test for converter from Ricardo's files

This commit is contained in:
Martin Diehl 2014-10-10 08:54:48 +00:00
parent 885a71c0b7
commit 46d67f63d8
4 changed files with 32 additions and 50 deletions
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43
processing/pre/geom_fromVPSC.py
View File

@ -1,40 +1,21 @@
#!/usr/bin/env python
# -*- coding: UTF-8 no BOM -*-
import os,sys,math,string,numpy
from optparse import OptionParser, OptionGroup, Option, SUPPRESS_HELP
import os,sys,math,string
import numpy as np
from optparse import OptionParser
import damask
scriptID = '$Id$'
scriptName = scriptID.split()[1]
#--------------------------------------------------------------------------------------------------
class extendableOption(Option):
#--------------------------------------------------------------------------------------------------
# used for definition of new option parser action 'extend', which enables to take multiple option arguments
# taken from online tutorial http://docs.python.org/library/optparse.html
ACTIONS = Option.ACTIONS + ("extend",)
STORE_ACTIONS = Option.STORE_ACTIONS + ("extend",)
TYPED_ACTIONS = Option.TYPED_ACTIONS + ("extend",)
ALWAYS_TYPED_ACTIONS = Option.ALWAYS_TYPED_ACTIONS + ("extend",)
def take_action(self, action, dest, opt, value, values, parser):
if action == "extend":
lvalue = value.split(",")
values.ensure_value(dest, []).extend(lvalue)
else:
Option.take_action(self, action, dest, opt, value, values, parser)
#--------------------------------------------------------------------------------------------------
# MAIN
#--------------------------------------------------------------------------------------------------
parser = OptionParser(option_class=extendableOption, usage='%prog options [file[s]]', description = """
parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [file[s]]', description = """
Generate geometry description and material configuration from input files used by R.A. Lebensohn
""" + string.replace('$Id$','\n','\\n')
)
""", version = scriptID)
parser.add_option('--column', dest='column', type='int', metavar = 'int', \
help='data column to discriminate phase 1 from 2 [%default]')
@ -81,9 +62,9 @@ for file in files:
if file['name'] != 'STDIN': file['croak'].write(file['name']+'\n')
info = {
'grid': numpy.zeros(3,'i'),
'size': numpy.zeros(3,'d'),
'origin': numpy.zeros(3,'d'),
'grid': np.zeros(3,'i'),
'size': np.zeros(3,'d'),
'origin': np.zeros(3,'d'),
'microstructures': 0,
'homogenization': options.homogenization
}
@ -120,10 +101,10 @@ for file in files:
'homogenization: %i\n'%info['homogenization'] + \
'microstructures: %i\n\n'%info['microstructures'])
if numpy.any(info['grid'] < 1):
if np.any(info['grid'] < 1):
file['croak'].write('invalid grid a b c.\n')
sys.exit()
if numpy.any(info['size'] <= 0.0):
if np.any(info['size'] <= 0.0):
file['croak'].write('invalid size x y z.\n')
sys.exit()
@ -143,7 +124,7 @@ for file in files:
#--- output finalization --------------------------------------------------------------------------
if file['name'] != 'STDIN':
table.output_close()
file['output'].close()
os.rename(file['name']+'_tmp',os.path.splitext(file['name'])[0] + \
{True: '_material.config',
False:'.geom'}[options.config])

1
processing/pre/geom_fromVoronoiTessellation.py
View File

@ -54,6 +54,7 @@ mappings = {
parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [file[s]]', description = """
Generate geometry description and material configuration by standard Voronoi tessellation of given seeds file.
""", version = scriptID)
parser.add_option('-g', '--grid', dest='grid', type='int', nargs = 3, metavar = 'int int int', \

6
processing/pre/geom_pack.py
View File

@ -36,7 +36,7 @@ compress geometry files with ranges "a to b" and/or multiples "n of x".
(options, filenames) = parser.parse_args()
# ------------------------------------------ setup file handles ------------------------------------
# ------------------------------------------ setup file handles -----------------------------------
files = []
if filenames == []:
files.append({'name':'STDIN', 'input':sys.stdin, 'output':sys.stdout, 'croak':sys.stderr})
@ -45,7 +45,7 @@ else:
if os.path.exists(name):
files.append({'name':name, 'input':open(name), 'output':open(name+'_tmp','w'), 'croak':sys.stderr})
# ------------------------------------------ loop over input files ---------------------------------
# ------------------------------------------ loop over input files --------------------------------
for file in files:
if file['name'] != 'STDIN': file['croak'].write('\033[1m'+scriptName+'\033[0m: '+file['name']+'\n')
else: file['croak'].write('\033[1m'+scriptName+'\033[0m\n')
@ -53,7 +53,7 @@ for file in files:
table = damask.ASCIItable(file['input'],file['output'],labels = False,buffered = False) # make unbuffered ASCII_table
table.head_read() # read ASCII header info
#--- interpret header ----------------------------------------------------------------------------
#--- interpret header -----------------------------------------------------------------------------
info = {
'grid': np.zeros(3,'i'),
'size': np.zeros(3,'d'),

2
processing/pre/geom_unpack.py
View File

@ -31,7 +31,6 @@ mappings = {
parser = OptionParser(option_class=damask.extendableOption, usage='%prog options [file[s]]', description = """
Unpack geometry files containing ranges "a to b" and/or "n of x" multiples (exclusively in one line).
""", version = scriptID)
parser.add_option('-1', '--onedimensional', dest='oneD', action='store_true', \
@ -58,6 +57,7 @@ for file in files:
table = damask.ASCIItable(file['input'],file['output'],labels = False,buffered = False) # make unbuffered ASCII_table
table.head_read() # read ASCII header info
#--- interpret header ----------------------------------------------------------------------------
info = {
'grid': np.zeros(3,'i'),