also use newer regex
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@ -833,7 +833,7 @@ class DADF5():
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N_not_calculated = len(todo)
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N_not_calculated = len(todo)
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while N_not_calculated > 0:
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while N_not_calculated > 0:
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result = results.get()
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result = results.get()
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with h5py.File(self.fname,'a') as f: # write to file
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with h5py.File(self.fname,'a') as f: # write to file
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dataset_out = f[result['group']].create_dataset(result['label'],data=result['data'])
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dataset_out = f[result['group']].create_dataset(result['label'],data=result['data'])
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for k in result['meta'].keys():
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for k in result['meta'].keys():
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dataset_out.attrs[k] = result['meta'][k].encode()
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dataset_out.attrs[k] = result['meta'][k].encode()
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@ -927,8 +927,8 @@ class DADF5():
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shape = [array.shape[0],np.product(array.shape[1:])]
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shape = [array.shape[0],np.product(array.shape[1:])]
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vtk_data.append(numpy_support.numpy_to_vtk(num_array=array.reshape(shape),
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vtk_data.append(numpy_support.numpy_to_vtk(num_array=array.reshape(shape),
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deep=True,array_type= vtk.VTK_DOUBLE))
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deep=True,array_type= vtk.VTK_DOUBLE))
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ph_name = re.compile(r'(\/[1-9])_([A-Z][a-z]*)_(([a-z]*)|([A-Z]*))') #looking for phase name in dataset name
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ph_name = re.compile(r'(?<=(constituent\/))(.*?)(?=(generic))') # identify phase name
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dset_name = '1_' + re.sub(ph_name,r'',x[0].split('/',1)[1]) #removing phase name from generic dataset
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dset_name = '1_' + re.sub(ph_name,r'',x[0].split('/',1)[1]) # removing phase name
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vtk_data[-1].SetName(dset_name)
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vtk_data[-1].SetName(dset_name)
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vtk_geom.GetCellData().AddArray(vtk_data[-1])
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vtk_geom.GetCellData().AddArray(vtk_data[-1])
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